Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,947,355 T→C M31T (ATG→ACG)  argA → N‑acetylglutamate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,3550TC99.8% 1687.2 / ‑5.2 519M31T (ATG→ACG) argAN‑acetylglutamate synthase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (171/347);  total (172/347)
Fisher's exact test for biased strand distribution p-value = 3.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01

Only 100 of 546 total aligned reads displayed.

TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG  >  NC_000913/2947265‑2947444
                                                                                          |                                                                                         
tGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGc                                                                                         <  2:3254957/93‑1 (MQ=255)
tGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGc                                                                                         >  2:6741050/1‑93 (MQ=255)
 ggTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCt                                                                                        <  2:54013/93‑1 (MQ=255)
  gTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTc                                                                                       <  1:6209488/93‑1 (MQ=255)
  gTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTc                                                                                       <  2:9536287/93‑1 (MQ=255)
   tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg                                                                                      <  1:8852523/93‑1 (MQ=255)
    aaaGGAACGTAAAACCGAGTTGGTCGAGGTATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcgg                                                                                     <  1:9696962/93‑1 (MQ=255)
     aaGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcggc                                                                                    <  1:4309758/93‑1 (MQ=255)
        gAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcggcggg                                                                                 >  1:2408621/1‑92 (MQ=255)
        gAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGt                                                                                 <  2:1235769/93‑1 (MQ=255)
        gAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGt                                                                                 >  1:3771547/1‑93 (MQ=255)
        gAACATAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATCCCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGt                                                                                 <  1:1518703/93‑1 (MQ=255)
         aaCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTg                                                                                >  1:7975683/1‑93 (MQ=255)
         aaCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTg                                                                                <  1:8506801/93‑1 (MQ=255)
          aCGTCAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa                                                                               <  2:8920433/93‑1 (MQ=255)
          aCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa                                                                               <  2:4048143/93‑1 (MQ=255)
          aCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa                                                                               >  2:9666288/1‑93 (MQ=255)
             tAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGc                                                                            >  2:2034205/1‑93 (MQ=255)
               aaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGcct                                                                          >  1:3651438/1‑92 (MQ=255)
               aaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCa                                                                          <  1:7134674/93‑1 (MQ=255)
               aaaCCGAGTTGGTCGAGGGATTCCACCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCa                                                                          >  2:2661688/1‑93 (MQ=255)
                aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAt                                                                         <  2:6150833/93‑1 (MQ=255)
                 aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAtt                                                                        <  1:973256/93‑1 (MQ=255)
                 aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAtt                                                                        <  2:7312454/93‑1 (MQ=255)
                  ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTg                                                                       >  2:214747/1‑93 (MQ=255)
                  ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTg                                                                       <  1:6986428/93‑1 (MQ=255)
                   cGAGTTGGTCGAGGGCTTCCGCCATTCGGTTCCCTCTATCAATACCCACCGGGGAAGAACGTTTGTTTTCACGCTCGGCGGTGATGCCATTGa                                                                      >  2:7558497/1‑93 (MQ=255)
                   cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa                                                                      <  2:6005089/93‑1 (MQ=255)
                    gAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAg                                                                     >  1:3540993/1‑93 (MQ=255)
                    gAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAg                                                                     >  2:3171648/1‑93 (MQ=255)
                      gTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAACCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCa                                                                   >  1:3233353/1‑93 (MQ=255)
                      gTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCa                                                                   <  1:5968750/93‑1 (MQ=255)
                      gTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCa                                                                   <  1:8371258/93‑1 (MQ=255)
                         ggTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATga                                                                <  2:1664040/93‑1 (MQ=255)
                          gTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATgag                                                               >  2:9412241/1‑93 (MQ=255)
                          gTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATgag                                                               <  2:4461321/93‑1 (MQ=255)
                             gAGGTATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAt                                                            <  2:3475164/93‑1 (MQ=255)
                              aGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                           >  2:5717515/1‑93 (MQ=255)
                              aGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                           >  2:829089/1‑93 (MQ=255)
                              aGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTAGGCGGTGAAGCCATTGAGCATGAGAAtt                                                           >  2:9707260/1‑93 (MQ=255)
                               gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAttt                                                          >  1:2963147/1‑93 (MQ=255)
                                 gATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                        >  1:6424405/1‑93 (MQ=255)
                                  aTTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtctc                                                       <  2:8037801/93‑1 (MQ=255)
                                   ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTcc                                                      >  1:3437292/1‑93 (MQ=255)
                                   ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTcc                                                      <  1:5600238/93‑1 (MQ=255)
                                    tCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCa                                                     >  2:6926988/1‑93 (MQ=255)
                                      cGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATAACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGt                                                   <  1:2782784/93‑1 (MQ=255)
                                       gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  <  1:1384829/93‑1 (MQ=255)
                                       gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  <  2:2321298/93‑1 (MQ=255)
                                       gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  >  1:5831397/1‑93 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGCAAAACGTTTGTCCTCACGCTCGCCGGTGAAGCCATTGAGCCTGAGAATTTCTCCAGtct                                                 >  2:8152161/1‑91 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt                                                 >  2:6618647/1‑93 (MQ=255)
                                          aTTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCg                                               >  1:5400370/1‑93 (MQ=255)
                                           ttCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGt                                              >  2:9101265/1‑93 (MQ=255)
                                            tCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGtt                                             <  1:7604590/93‑1 (MQ=255)
                                              ggTTCCCTATATCAATCCACACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                           <  2:3975170/93‑1 (MQ=255)
                                              ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                           <  1:1002726/93‑1 (MQ=255)
                                                ttCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATAGTTAATg                                         >  2:7698777/1‑93 (MQ=255)
                                                tgcccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATg                                         <  1:4136683/91‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  2:4992800/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  2:6252914/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  1:1194647/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  1:185806/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  1:9297619/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  1:808178/93‑1 (MQ=255)
                                                   ccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGata                                      <  2:748088/93‑1 (MQ=255)
                                                   ccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGata                                      >  1:6571871/1‑93 (MQ=255)
                                                    cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                     <  1:2170009/93‑1 (MQ=255)
                                                    cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                     <  1:3130419/93‑1 (MQ=255)
                                                      atatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                   >  2:8776175/1‑93 (MQ=255)
                                                        atCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                 <  2:5051311/93‑1 (MQ=255)
                                                         tCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                <  2:8636345/93‑1 (MQ=255)
                                                         tCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                <  2:7828001/93‑1 (MQ=255)
                                                         tCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                <  1:6077396/93‑1 (MQ=255)
                                                          cAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgtt                               <  1:3935737/93‑1 (MQ=255)
                                                            aTACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgt                             <  1:4719375/93‑1 (MQ=255)
                                                             tACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgtt                            >  1:778762/1‑93 (MQ=255)
                                                              aCCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGttgttg                           <  1:7462670/93‑1 (MQ=255)
                                                              aCCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGttgttg                           <  2:7198216/93‑1 (MQ=255)
                                                               cccACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGc                          <  2:9260798/93‑1 (MQ=255)
                                                               cccACCGGGGAAAAACGTTTGTCATAACGCTCGGCGGTAAAGCCATTGAGCATGAGAATTTCTCAAGCATCGTTAATGATATCGGGTTGTTGc                          >  2:5860782/1‑93 (MQ=255)
                                                                 cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcac                        >  1:9836468/1‑93 (MQ=255)
                                                                  aCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcaca                       >  2:8464599/1‑93 (MQ=255)
                                                                   ccGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAg                      >  1:4917944/1‑93 (MQ=255)
                                                                    cGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGc                     <  2:1811725/93‑1 (MQ=255)
                                                                      gggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                   <  2:4344089/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  2:1417834/93‑1 (MQ=255)
                                                                        gAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCg                 <  1:5151848/93‑1 (MQ=255)
                                                                        gAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCg                 <  2:2788539/93‑1 (MQ=255)
                                                                          aaaaCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGc               >  1:6826791/1‑93 (MQ=255)
                                                                             aCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATTGGGTTGTTGCACAGCCTCGGCATc            <  1:2663117/93‑1 (MQ=255)
                                                                               gTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCg          <  2:3688470/93‑1 (MQ=255)
                                                                                 ttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc        <  2:2982110/93‑1 (MQ=255)
                                                                                 ttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc        <  2:7085847/93‑1 (MQ=255)
                                                                                 ttGTCATCACGCTCGGCAGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc        <  1:8973987/93‑1 (MQ=255)
                                                                                   gTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtg      >  1:458407/1‑93 (MQ=255)
                                                                                    tcatcaCGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg     >  2:4605791/1‑93 (MQ=255)
                                                                                     catcacGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggt    <  1:9519487/93‑1 (MQ=255)
                                                                                      atcacGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtg   <  2:648377/93‑1 (MQ=255)
                                                                                       tcacGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggtgg  <  1:1294749/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG  >  NC_000913/2947265‑2947444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 278 total aligned reads displayed.
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  NC_000913/2947262‑2947448
                                                                                             |                                                                                             
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCAC                                                                                               <  SRR4302540.4476777/94‑1 (MQ=60)
 CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG                                                                                              >  SRR4302540.2282023/1‑94 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             >  SRR4302540.6619993/1‑94 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             <  SRR4302540.6838293/94‑1 (MQ=60)
   TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCT                                                                                            >  SRR4302540.3438035/1‑94 (MQ=60)
   TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCT                                                                                            >  SRR4302540.4193247/1‑94 (MQ=60)
   TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCT                                                                                            >  SRR4302540.9768174/1‑94 (MQ=60)
   GGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCT                                                                                            <  SRR4302540.97429/94‑1 (MQ=60)
    GGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTC                                                                                           >  SRR4302540.6969798/1‑94 (MQ=60)
    GGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTC                                                                                           <  SRR4302540.7597092/94‑1 (MQ=60)
    GGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTC                                                                                           <  SRR4302540.7597093/94‑1 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          <  SRR4302540.4556923/94‑1 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          <  SRR4302540.8157722/94‑1 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          >  SRR4302540.3085353/1‑94 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          >  SRR4302540.1766455/1‑94 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          <  SRR4302540.10103536/94‑1 (MQ=60)
      TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG                                                                                         <  SRR4302540.8954932/94‑1 (MQ=60)
      TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG                                                                                         <  SRR4302540.2011755/94‑1 (MQ=60)
      TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG                                                                                         <  SRR4302540.9911677/94‑1 (MQ=60)
       AAAGGAACGTAAAACCGAGTTGGTCGAGGTATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGC                                                                                        <  SRR4302540.9810978/94‑1 (MQ=60)
        AAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCG                                                                                       >  SRR4302540.8887377/1‑94 (MQ=60)
        AAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCG                                                                                       <  SRR4302540.4132534/94‑1 (MQ=60)
        AAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCG                                                                                       <  SRR4302540.7733142/94‑1 (MQ=60)
        AAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCG                                                                                       <  SRR4302540.4768367/94‑1 (MQ=60)
        AAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCG                                                                                       <  SRR4302540.4356670/94‑1 (MQ=60)
         AGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGG                                                                                      >  SRR4302540.7055597/1‑94 (MQ=60)
          GGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGT                                                                                     >  SRR4302540.3812694/1‑94 (MQ=60)
          GGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGG                                                                                     >  SRR4302540.2434592/1‑94 (MQ=60)
           GAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG                                                                                    >  SRR4302540.8068600/1‑94 (MQ=60)
           GAACATAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATCCCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG                                                                                    <  SRR4302540.1535506/94‑1 (MQ=60)
            AACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGA                                                                                   <  SRR4302540.9261741/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  >  SRR4302540.4674530/1‑94 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  >  SRR4302540.5738961/1‑94 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302540.9887822/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302540.6991910/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302540.8676925/94‑1 (MQ=60)
              CGTAAAACCGAGTTGGTTGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAG                                                                                 <  SRR4302540.4856799/94‑1 (MQ=60)
              CGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAG                                                                                 >  SRR4302540.3538132/1‑94 (MQ=60)
               GTAAAACCGAGTTGGTCGAGGGAGTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGC                                                                                >  SRR4302540.1846585/1‑94 (MQ=60)
                 AAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCT                                                                              >  SRR4302540.3691433/1‑94 (MQ=60)
                  AAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAT                                                                             <  SRR4302540.7214161/94‑1 (MQ=60)
                   ACCCGAGTTGGTGGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            <  SRR4302540.7862630/94‑1 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            >  SRR4302540.5654162/1‑94 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            <  SRR4302540.4423534/94‑1 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            >  SRR4302540.3294896/1‑94 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            <  SRR4302540.350898/94‑1 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            <  SRR4302540.2239282/94‑1 (MQ=60)
                    ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           <  SRR4302540.7935460/94‑1 (MQ=60)
                    ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           <  SRR4302540.983259/94‑1 (MQ=60)
                    ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           <  SRR4302540.3749492/94‑1 (MQ=60)
                     CCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGA                                                                          <  SRR4302540.8384331/94‑1 (MQ=60)
                     CCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGA                                                                          <  SRR4302540.7064000/94‑1 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCCTTGAG                                                                         >  SRR4302540.6267915/1‑94 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         <  SRR4302540.898287/94‑1 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         >  SRR4302540.3579664/1‑94 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         >  SRR4302540.7830046/1‑94 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         >  SRR4302540.4650054/1‑94 (MQ=60)
                        AGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAACCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCA                                                                       >  SRR4302540.3268514/1‑94 (MQ=60)
                        AGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCA                                                                       >  SRR4302540.1375502/1‑94 (MQ=60)
                        AGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTATGTCATCACGCTCGGCGGTGAAGCCATTGAGCA                                                                       >  SRR4302540.9824523/1‑94 (MQ=60)
                         GTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAT                                                                      <  SRR4302540.3607205/94‑1 (MQ=60)
                         GTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAT                                                                      <  SRR4302540.8468405/94‑1 (MQ=60)
                         GTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAT                                                                      <  SRR4302540.6921407/94‑1 (MQ=60)
                         GTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAT                                                                      <  SRR4302540.8468406/94‑1 (MQ=60)
                          TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG                                                                     <  SRR4302540.5319316/94‑1 (MQ=60)
                          TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG                                                                     >  SRR4302540.4137715/1‑94 (MQ=60)
                          TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG                                                                     <  SRR4302540.6355727/94‑1 (MQ=60)
                           TGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGA                                                                    <  SRR4302540.1134210/94‑1 (MQ=60)
                           TGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGA                                                                    <  SRR4302540.6373116/94‑1 (MQ=60)
                           TGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGA                                                                    >  SRR4302540.1328080/1‑94 (MQ=60)
                           TGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTAAGCATGA                                                                    >  SRR4302540.1328079/1‑94 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   >  SRR4302540.509248/1‑94 (MQ=60)
                             GTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGA                                                                  <  SRR4302540.3116062/94‑1 (MQ=60)
                             GTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGA                                                                  <  SRR4302540.7239648/94‑1 (MQ=60)
                             GTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGA                                                                  <  SRR4302540.6419432/94‑1 (MQ=60)
                              TCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAA                                                                 <  SRR4302540.9520745/94‑1 (MQ=60)
                              GCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAA                                                                 <  SRR4302540.1250116/94‑1 (MQ=60)
                               ttAGGGATTCCTCCATTCGGTTCCCTATAGCAATACCCACCGGGGAAAAACGGGTGTCATCACGCTCGGCTGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302540.4844646/92‑1 (MQ=60)
                               TGAGGTATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302540.709528/94‑1 (MQ=60)
                                GAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATT                                                               >  SRR4302540.9198596/1‑94 (MQ=60)
                                  GGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTC                                                             <  SRR4302540.6517123/94‑1 (MQ=60)
                                   GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT                                                            >  SRR4302540.2748700/1‑94 (MQ=60)
                                   GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT                                                            >  SRR4302540.6495913/1‑94 (MQ=60)
                                   GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT                                                            <  SRR4302540.7309891/94‑1 (MQ=60)
                                     ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          >  SRR4302540.3474658/1‑94 (MQ=60)
                                      TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA                                                         <  SRR4302540.4505996/94‑1 (MQ=60)
                                      TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA                                                         <  SRR4302540.1524890/94‑1 (MQ=60)
                                      TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA                                                         <  SRR4302540.4241391/94‑1 (MQ=60)
                                      TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA                                                         >  SRR4302540.3966648/1‑94 (MQ=60)
                                      TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA                                                         >  SRR4302540.6088286/1‑94 (MQ=60)
                                       TCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG                                                        >  SRR4302540.4425371/1‑94 (MQ=60)
                                       TCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG                                                        <  SRR4302540.9669144/94‑1 (MQ=60)
                                       TCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG                                                        <  SRR4302540.6012441/94‑1 (MQ=60)
                                        CCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGT                                                       <  SRR4302540.5908307/94‑1 (MQ=60)
                                         CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA                                                      >  SRR4302540.5895874/1‑94 (MQ=60)
                                         CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATAACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA                                                      <  SRR4302540.2812842/94‑1 (MQ=60)
                                          GCCATTTGGTTCCCTATATCAATACCCCCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302540.2532498/94‑1 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     >  SRR4302540.3332037/1‑94 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302540.2532499/94‑1 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302540.8495694/94‑1 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     >  SRR4302540.377188/1‑94 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302540.4976188/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302540.7918949/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302540.325646/94‑1 (MQ=60)
                                            CATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCG                                                   >  SRR4302540.5459746/1‑94 (MQ=60)
                                            CATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCG                                                   >  SRR4302540.3676964/1‑94 (MQ=60)
                                             ATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGT                                                  >  SRR4302540.6608114/1‑94 (MQ=60)
                                             ATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTAATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGT                                                  >  SRR4302540.2993383/1‑94 (MQ=60)
                                               TCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTA                                                <  SRR4302540.7690038/94‑1 (MQ=60)
                                                CGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAA                                               <  SRR4302540.2374877/94‑1 (MQ=60)
                                                 GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT                                              <  SRR4302540.1012909/94‑1 (MQ=60)
                                                 GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT                                              <  SRR4302540.2977262/94‑1 (MQ=60)
                                                  GTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATG                                             <  SRR4302540.2796092/94‑1 (MQ=60)
                                                   TTCCCTATATCAATACCCACC‑GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           >  SRR4302540.1449071/1‑94 (MQ=60)
                                                   TGCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGA                                            <  SRR4302540.4181443/94‑1 (MQ=60)
                                                    TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGTTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.1119268/94‑1 (MQ=60)
                                                    TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.5293232/94‑1 (MQ=60)
                                                    TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.816767/94‑1 (MQ=60)
                                                    TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.9000652/94‑1 (MQ=60)
                                                    TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.1206951/94‑1 (MQ=60)
                                                    TCCCTAGATCAATACCCGCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT                                           <  SRR4302540.5806840/94‑1 (MQ=60)
                                                     CCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATA                                          <  SRR4302540.5320566/94‑1 (MQ=60)
                                                     CCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATA                                          <  SRR4302540.8107223/94‑1 (MQ=60)
                                                     CCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGGTAATGATA                                          >  SRR4302540.3856422/1‑94 (MQ=60)
                                                     CCCTATATCAATACCAACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAAA                                          >  SRR4302540.6644685/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGCAGCCATTGAGCATGAGAATTTCTCCAGTCTCGTTAATGAGAT                                         >  SRR4302540.5577287/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         >  SRR4302540.3229290/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         <  SRR4302540.9833674/94‑1 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         <  SRR4302540.1910609/94‑1 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         <  SRR4302540.5790526/94‑1 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        >  SRR4302540.9921162/1‑94 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        <  SRR4302540.2193411/94‑1 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        <  SRR4302540.6264072/94‑1 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        <  SRR4302540.3164583/94‑1 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        <  SRR4302540.1714769/94‑1 (MQ=60)
                                                        TATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCG                                       >  SRR4302540.9533138/1‑94 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      <  SRR4302540.1264959/94‑1 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      <  SRR4302540.7621475/94‑1 (MQ=60)
                                                          TATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGG                                     <  SRR4302540.2946093/94‑1 (MQ=60)
                                                           ATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGT                                    >  SRR4302540.7979662/1‑94 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   <  SRR4302540.2785507/94‑1 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   <  SRR4302540.6144976/94‑1 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   <  SRR4302540.6144974/94‑1 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   <  SRR4302540.3758966/94‑1 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   <  SRR4302540.9148386/94‑1 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  >  SRR4302540.5060962/1‑94 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  >  SRR4302540.6002599/1‑94 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  >  SRR4302540.6002598/1‑94 (MQ=60)
                                                              AATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGT                                 <  SRR4302540.4047681/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                >  SRR4302540.10146283/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302540.6524688/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302540.3035181/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302540.5375819/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                >  SRR4302540.787064/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302540.4769784/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302540.7582761/94‑1 (MQ=60)
                                                                TACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTG                               <  SRR4302540.7477987/94‑1 (MQ=60)
                                                                TACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAAAAATTCTCCAGTATCGTTAATGATATCGGGTTGTTG                               <  SRR4302540.1812031/94‑1 (MQ=60)
                                                                   CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCAC                            <  SRR4302540.7136296/94‑1 (MQ=60)
                                                                   CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCAC                            >  SRR4302540.9951488/1‑94 (MQ=60)
                                                                   CCACCGGGGAAAAACGGTTGTCATCACGCTCGGCGGTGAAGCCACAAAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGTTTGTTGCAA                            >  SRR4302540.9951308/1‑94 (MQ=60)
                                                                    CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACA                           <  SRR4302540.7457405/94‑1 (MQ=60)
                                                                    CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACA                           >  SRR4302540.6816872/1‑94 (MQ=60)
                                                                    CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCCCCAGTATCGTTAATGATATCGGGTTGTTGCACA                           <  SRR4302540.6652272/94‑1 (MQ=60)
                                                                     ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGTTGAAGCCCTTGAGCATGAGAATTTCTCCTGTATCGTTAATGATATCGGGTTGTTGaaaac                          >  SRR4302540.8322304/1‑89 (MQ=60)
                                                                     ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG                          <  SRR4302540.6168213/94‑1 (MQ=60)
                                                                     ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG                          >  SRR4302540.4970908/1‑94 (MQ=60)
                                                                     ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG                          <  SRR4302540.3527206/94‑1 (MQ=60)
                                                                       CGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCC                        <  SRR4302540.3039084/94‑1 (MQ=60)
                                                                        GGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCT                       <  SRR4302540.1474908/94‑1 (MQ=60)
                                                                         GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC                      <  SRR4302540.8331646/94‑1 (MQ=60)
                                                                         GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAGTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC                      <  SRR4302540.4716823/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302540.1366335/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302540.3801580/94‑1 (MQ=60)
                                                                            AAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGC                   >  SRR4302540.3652919/1‑94 (MQ=60)
                                                                            AAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGC                   <  SRR4302540.2372237/94‑1 (MQ=60)
                                                                             AAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCA                  <  SRR4302540.9375853/94‑1 (MQ=60)
                                                                             AAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCA                  >  SRR4302540.2908990/1‑94 (MQ=60)
                                                                             AAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCA                  >  SRR4302540.8482079/1‑94 (MQ=60)
                                                                              AAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAT                 >  SRR4302540.3829290/1‑94 (MQ=60)
                                                                              AAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAT                 <  SRR4302540.8714667/94‑1 (MQ=60)
                                                                               AACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATC                >  SRR4302540.5603497/1‑94 (MQ=60)
                                                                                ACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATTGGGTTGTTGCACAGCCTCGGCATCC               <  SRR4302540.2692001/94‑1 (MQ=60)
                                                                                  GTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGT             <  SRR4302540.8168067/94‑1 (MQ=60)
                                                                                    TTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCT           <  SRR4302540.6061492/94‑1 (MQ=60)
                                                                                    TTGTCATCACGCTCGGCAGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCT           <  SRR4302540.9080677/94‑1 (MQ=60)
                                                                                     TGTCATCACGGTCGGCGGTGAAGTCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTG          <  SRR4302540.3999213/94‑1 (MQ=60)
                                                                                     TGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTG          <  SRR4302540.9589005/94‑1 (MQ=60)
                                                                                      GTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGG         <  SRR4302540.4953488/94‑1 (MQ=60)
                                                                                       TCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGT        <  SRR4302540.1901660/94‑1 (MQ=60)
                                                                                       TCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGT        >  SRR4302540.856004/1‑94 (MQ=60)
                                                                                       TCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGT        >  SRR4302540.7806827/1‑94 (MQ=60)
                                                                                        CATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTG       <  SRR4302540.9632223/94‑1 (MQ=60)
                                                                                        CATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTG       >  SRR4302540.8763153/1‑94 (MQ=60)
                                                                                         ATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG      <  SRR4302540.2474202/94‑1 (MQ=60)
                                                                                          TCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGT     <  SRR4302540.1308148/94‑1 (MQ=60)
                                                                                           CACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG    <  SRR4302540.6863658/94‑1 (MQ=60)
                                                                                           CACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGGTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG    >  SRR4302540.9735724/1‑94 (MQ=60)
                                                                                             CGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  SRR4302540.717798/1‑94 (MQ=60)
                                                                                             CGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  SRR4302540.917515/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  NC_000913/2947262‑2947448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑