Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,973,216	C→T	A153A (GCC→GCT)	wecE →	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,973,216	0	C	T	100.0%	1493.4 / NA	401	A153A (GCC→GCT)	wecE	putative regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (205/196); total (205/196)

Only 100 of 418 total aligned reads displayed.

CGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA  >  NC_000913/3973126‑3973305

cGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGAtgctgc                                                                                         <  2:7915274/93‑1 (MQ=255)

cGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGAtgctgc                                                                                         <  2:3238870/93‑1 (MQ=255)

cGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGAtgctgc                                                                                         >  1:5649773/1‑93 (MQ=255)

  tGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTc                                                                                       <  2:378024/93‑1 (MQ=255)

  tGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTc                                                                                       <  2:2550873/93‑1 (MQ=255)

  tGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTc                                                                                       >  1:4093782/1‑93 (MQ=255)

  tGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTGTGTGGTAGAAGATGCTGCTc                                                                                       <  1:9996498/93‑1 (MQ=255)

   gCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCa                                                                                      <  1:8990641/93‑1 (MQ=255)

   gCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAAAAGATGCTGCTCa                                                                                      <  2:569688/93‑1 (MQ=255)

    ccGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAg                                                                                     <  2:1859699/93‑1 (MQ=255)

    ccGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAg                                                                                     <  2:8431207/93‑1 (MQ=255)

      ggTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAggg                                                                                   >  1:4211269/1‑93 (MQ=255)

       gTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCTTAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGc                                                                                  >  2:7963181/1‑93 (MQ=255)

       gTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGc                                                                                  >  1:1031227/1‑93 (MQ=255)

        tCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCg                                                                                 <  1:6987408/93‑1 (MQ=255)

           aTTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGa                                                                              <  1:4598673/93‑1 (MQ=255)

            ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAt                                                                             >  1:512613/1‑93 (MQ=255)

            ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAt                                                                             <  2:7055792/93‑1 (MQ=255)

            ttACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGGGAt                                                                             >  1:7480180/1‑93 (MQ=255)

             tACGCGGGTGTGGCCTGCGAAATGGACATCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATg                                                                            <  2:6774008/93‑1 (MQ=255)

                  gggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCAc                                                                       <  1:3204759/93‑1 (MQ=255)

                  gggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCAc                                                                       <  1:6229868/93‑1 (MQ=255)

                   ggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACt                                                                      <  2:9161257/93‑1 (MQ=255)

                   ggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACt                                                                      >  1:8622426/1‑93 (MQ=255)

                   ggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACt                                                                      <  2:7319869/93‑1 (MQ=255)

                   ggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACt                                                                      >  2:1767607/1‑93 (MQ=255)

                   ggTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACt                                                                      <  1:6349251/93‑1 (MQ=255)

                    gtgtGGCCTGCGAAATGGACACCATTATCGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACtt                                                                     <  1:533192/93‑1 (MQ=255)

                      gtgGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTAc                                                                   <  1:8480286/93‑1 (MQ=255)

                      gtgGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTAc                                                                   >  1:166040/1‑93 (MQ=255)

                        ggCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACaa                                                                 <  1:447258/93‑1 (MQ=255)

                          ccTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAg                                                               <  1:8286601/93‑1 (MQ=255)

                           cTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAgg                                                              <  2:3395620/93‑1 (MQ=255)

                            tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg                                                             >  1:5241556/1‑93 (MQ=255)

                            tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg                                                             >  1:6429774/1‑93 (MQ=255)

                            tGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTGTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAggg                                                             >  2:6000803/1‑93 (MQ=255)

                             gCGAAATGGACACCATTATGGCGCAGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGc                                                            <  2:5523837/93‑1 (MQ=255)

                              cGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCg                                                           <  2:4735804/93‑1 (MQ=255)

                                aaaTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTg                                                         >  2:127066/1‑93 (MQ=255)

                                  aTGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCa                                                       >  2:8840489/1‑93 (MQ=255)

                                   tGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAc                                                      >  1:4153016/1‑93 (MQ=255)

                                     gACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGAGGTTGCTCAGGGCTTGACTTCCACTTACAAAGGGCGGGCACTg                                                    >  1:2791033/1‑93 (MQ=255)

                                      acacCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTgg                                                   <  2:9062298/93‑1 (MQ=255)

                                        acCATTATGGCGTTTGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGa                                                 <  2:5255234/93‑1 (MQ=255)

                                        acCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGa                                                 <  1:6144220/93‑1 (MQ=255)

                                         ccATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGaa                                                >  2:51677/1‑93 (MQ=255)

                                         ccATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGaa                                                <  1:8746368/93‑1 (MQ=255)

                                            ttATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCa                                             >  2:3019798/1‑93 (MQ=255)

                                            ttATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCa                                             <  1:4822778/93‑1 (MQ=255)

                                            ttATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCa                                             <  1:7318423/93‑1 (MQ=255)

                                              aTGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCAtt                                           >  1:3842351/1‑93 (MQ=255)

                                               tGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTg                                          <  2:7593414/93‑1 (MQ=255)

                                                ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTgg                                         >  1:1853922/1‑93 (MQ=255)

                                                 gCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGt                                        <  2:7798704/93‑1 (MQ=255)

                                                 gCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGt                                        <  1:1247787/93‑1 (MQ=255)

                                                  cGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTc                                       <  2:4212905/93‑1 (MQ=255)

                                                    ttGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCat                                     >  2:2086543/1‑93 (MQ=255)

                                                     tGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCata                                    <  2:229948/93‑1 (MQ=255)

                                                     tGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCata                                    <  1:3293475/93‑1 (MQ=255)

                                                      ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCatat                                   <  1:1465392/93‑1 (MQ=255)

                                                       gCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAtt                                  <  1:677355/93‑1 (MQ=255)

                                                        ggAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTg                                 <  2:8197353/92‑1 (MQ=255)

                                                        cGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTg                                 <  2:5913144/93‑1 (MQ=255)

                                                        cGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTg                                 <  2:4576160/93‑1 (MQ=255)

                                                          aaaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgc                               <  1:2569319/93‑1 (MQ=255)

                                                          aaaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgc                               <  2:2824796/93‑1 (MQ=255)

                                                          aaaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgc                               >  1:9330227/1‑93 (MQ=255)

                                                           aaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgct                              <  2:8636789/93‑1 (MQ=255)

                                                           aaaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgct                              <  1:9745912/93‑1 (MQ=255)

                                                            aaaGCATAATTTGTTTGTTGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg                             <  1:2299132/93‑1 (MQ=255)

                                                            aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg                             <  2:4522772/93‑1 (MQ=255)

                                                            aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg                             >  2:7547881/1‑93 (MQ=255)

                                                            aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg                             >  2:6254399/1‑93 (MQ=255)

                                                            aaaGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctg                             >  1:5569816/1‑93 (MQ=255)

                                                              aGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGgctgct                           <  1:7232711/93‑1 (MQ=255)

                                                                 aTAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTa                        >  1:777788/1‑93 (MQ=255)

                                                                 aTAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTa                        <  1:7916191/93‑1 (MQ=255)

                                                                  tAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAg                       >  2:2706587/1‑93 (MQ=255)

                                                                    aTTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCt                     >  1:7661083/1‑93 (MQ=255)

                                                                     tttgtttgTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCtt                    >  1:3702007/1‑93 (MQ=255)

                                                                       tgtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTcc                  >  1:5813137/1‑93 (MQ=255)

                                                                        gtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCa                 <  2:3627706/93‑1 (MQ=255)

                                                                        gtttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCa                 <  1:688334/93‑1 (MQ=255)

                                                                        ggttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACGTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCa                 <  1:8353066/91‑1 (MQ=255)

                                                                         tttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAt                >  2:4064884/1‑93 (MQ=255)

                                                                          ttgtGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATg               >  1:1084609/1‑93 (MQ=255)

                                                                           tgtgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGa              >  2:5629290/1‑93 (MQ=255)

                                                                           tgtgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGa              >  2:4387438/1‑93 (MQ=255)

                                                                           tgtgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGa              <  2:1469561/93‑1 (MQ=255)

                                                                            gtgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGaa             <  2:6133277/93‑1 (MQ=255)

                                                                             tgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGaaa            <  2:6468764/93‑1 (MQ=255)

                                                                             tgGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTCCCATTaac            >  1:3427996/1‑92 (MQ=255)

                                                                               gTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAcc          >  1:6645272/1‑93 (MQ=255)

                                                                                tAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCa         <  1:5013107/93‑1 (MQ=255)

                                                                                 agaagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGGTTTAGCTTCCATGAAAACaa        >  2:3510132/1‑93 (MQ=255)

                                                                                  gaagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaa       >  2:53609/1‑93 (MQ=255)

                                                                                   aagaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaaa      <  2:9378027/93‑1 (MQ=255)

                                                                                    agaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaaaa     <  1:5934432/93‑1 (MQ=255)

                                                                                    agaTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCaaaaa     >  2:9689690/1‑93 (MQ=255)

                                                                                       tgctgcTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTa  <  1:953489/93‑1 (MQ=255)

CGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA  >  NC_000913/3973126‑3973305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 239 total aligned reads displayed.

TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG  >  NC_000913/3973123‑3973309

TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCT                                                                                               <  SRR4302540.7187166/94‑1 (MQ=60)

 ATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTG                                                                                              >  SRR4302540.3698029/1‑94 (MQ=60)

 ATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTG                                                                                              <  SRR4302540.1682034/94‑1 (MQ=60)

  TCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGC                                                                                             >  SRR4302540.4164128/1‑94 (MQ=60)

  TCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGC                                                                                             <  SRR4302540.7551508/94‑1 (MQ=60)

   CGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCT                                                                                            <  SRR4302540.3729334/94‑1 (MQ=60)

   CGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCT                                                                                            >  SRR4302540.7962023/1‑94 (MQ=60)

    GTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTC                                                                                           >  SRR4302540.4137948/1‑94 (MQ=60)

    GTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTC                                                                                           >  SRR4302540.4760166/1‑94 (MQ=60)

     TGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCA                                                                                          <  SRR4302540.10112972/94‑1 (MQ=60)

     TGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTGTGTGGTAGAAGATGCTGCTCA                                                                                          <  SRR4302540.10112974/94‑1 (MQ=60)

      GCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAG                                                                                         <  SRR4302540.9098307/94‑1 (MQ=60)

      GCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAG                                                                                         >  SRR4302540.6736906/1‑94 (MQ=60)

       CCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGG                                                                                        >  SRR4302540.9069532/1‑94 (MQ=60)

       CCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGG                                                                                        <  SRR4302540.1095050/94‑1 (MQ=60)

        CGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGG                                                                                       <  SRR4302540.9720431/94‑1 (MQ=60)

        CGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGG                                                                                       <  SRR4302540.4525610/94‑1 (MQ=60)

        CGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGG                                                                                       >  SRR4302540.4257126/1‑94 (MQ=60)

         GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC                                                                                      >  SRR4302540.6444753/1‑94 (MQ=60)

         GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC                                                                                      <  SRR4302540.5663441/94‑1 (MQ=60)

         GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC                                                                                      <  SRR4302540.4549970/94‑1 (MQ=60)

         GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC                                                                                      >  SRR4302540.9521416/1‑94 (MQ=60)

         GGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGC                                                                                      >  SRR4302540.1041706/1‑94 (MQ=60)

          GTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCG                                                                                     >  SRR4302540.765390/1‑94 (MQ=60)

          GTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCG                                                                                     >  SRR4302540.1113381/1‑94 (MQ=60)

           TCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGT                                                                                    >  SRR4302540.9814817/1‑94 (MQ=60)

           TCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGT                                                                                    <  SRR4302540.7064983/94‑1 (MQ=60)

           TCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGT                                                                                    >  SRR4302540.7344038/1‑94 (MQ=60)

           TCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGG                                                                                    >  SRR4302540.5856110/1‑94 (MQ=60)

            CCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTG                                                                                   >  SRR4302540.8433838/1‑94 (MQ=60)

             CATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGA                                                                                  >  SRR4302540.589658/1‑94 (MQ=60)

             CATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGA                                                                                  >  SRR4302540.8668963/1‑94 (MQ=60)

              ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT                                                                                 >  SRR4302540.518117/1‑94 (MQ=60)

              ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT                                                                                 <  SRR4302540.1136353/94‑1 (MQ=60)

              ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGAT                                                                                 <  SRR4302540.870044/94‑1 (MQ=60)

              ATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGGGAT                                                                                 >  SRR4302540.7563667/1‑94 (MQ=60)

               TTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATG                                                                                <  SRR4302540.5705647/94‑1 (MQ=60)

                 ACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTC                                                                              >  SRR4302540.7703934/1‑94 (MQ=60)

                   GCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCA                                                                            >  SRR4302540.5394138/1‑94 (MQ=60)

                   GCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCA                                                                            <  SRR4302540.6318841/94‑1 (MQ=60)

                    CGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCAC                                                                           >  SRR4302540.7154141/1‑94 (MQ=60)

                    CGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCAC                                                                           >  SRR4302540.6029999/1‑94 (MQ=60)

                     GGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACT                                                                          <  SRR4302540.6299153/94‑1 (MQ=60)

                     GGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACT                                                                          >  SRR4302540.8722585/1‑94 (MQ=60)

                     GGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACT                                                                          <  SRR4302540.3239563/94‑1 (MQ=60)

                     GGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACT                                                                          >  SRR4302540.6691678/1‑94 (MQ=60)

                      GGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTT                                                                         <  SRR4302540.6419957/94‑1 (MQ=60)

                       GTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTA                                                                        >  SRR4302540.244785/1‑94 (MQ=60)

                       GTGTGGCCTGCGAAATGGACACCATTATCGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTA                                                                        <  SRR4302540.538958/94‑1 (MQ=60)

                        TGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTAC                                                                       >  SRR4302540.167702/1‑94 (MQ=60)

                         GTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACA                                                                      <  SRR4302540.5628694/94‑1 (MQ=60)

                           GGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAA                                                                    <  SRR4302540.452025/94‑1 (MQ=60)

                            GCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAG                                                                   <  SRR4302540.3158570/94‑1 (MQ=60)

                            GCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAG                                                                   <  SRR4302540.7669314/94‑1 (MQ=60)

                            GCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAG                                                                   <  SRR4302540.4001952/94‑1 (MQ=60)

                             CCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGG                                                                  <  SRR4302540.8382841/94‑1 (MQ=60)

                             CCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGG                                                                  <  SRR4302540.8382842/94‑1 (MQ=60)

                             CCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGG                                                                  <  SRR4302540.4624169/94‑1 (MQ=60)

                              CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG                                                                 >  SRR4302540.6949097/1‑94 (MQ=60)

                              CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG                                                                 >  SRR4302540.9792671/1‑94 (MQ=60)

                              CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG                                                                 >  SRR4302540.5298729/1‑94 (MQ=60)

                              CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG                                                                 >  SRR4302540.6501341/1‑94 (MQ=60)

                              CTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGG                                                                 >  SRR4302540.7129162/1‑94 (MQ=60)

                               TGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGC                                                                >  SRR4302540.5286241/1‑94 (MQ=60)

                                  GAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTG                                                             <  SRR4302540.7341341/94‑1 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          <  SRR4302540.2830166/94‑1 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          >  SRR4302540.4157101/1‑94 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          >  SRR4302540.4198282/1‑94 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          >  SRR4302540.4197999/1‑94 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          <  SRR4302540.3336997/94‑1 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          <  SRR4302540.9811970/94‑1 (MQ=60)

                                     ATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGAAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          >  SRR4302540.2487254/1‑94 (MQ=60)

                                     ATGCACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCAC                                                          <  SRR4302540.3993726/94‑1 (MQ=60)

                                      TGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACT                                                         >  SRR4302540.1964466/1‑94 (MQ=60)

                                       GGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTG                                                        >  SRR4302540.3659644/1‑94 (MQ=60)

                                        GACACCATTATGGCGTTGGCGAAAAAGCATGATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGG                                                       >  SRR4302540.4220468/1‑94 (MQ=60)

                                         ACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGG                                                      >  SRR4302540.4323450/1‑94 (MQ=60)

                                         ACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGG                                                      >  SRR4302540.9061069/1‑94 (MQ=60)

                                          CACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGA                                                     <  SRR4302540.8519661/94‑1 (MQ=60)

                                           ACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAC                                                    >  SRR4302540.6951543/1‑94 (MQ=60)

                                           ACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAA                                                    <  SRR4302540.6212656/94‑1 (MQ=60)

                                           ACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAA                                                    >  SRR4302540.8817695/1‑94 (MQ=60)

                                           ACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAA                                                    >  SRR4302540.6841945/1‑94 (MQ=60)

                                           ACCATTATGGCGTTGGCGAAAAAGCATAATGTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAA                                                    <  SRR4302540.5124944/94‑1 (MQ=60)

                                            CCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAC                                                   >  SRR4302540.9301638/1‑94 (MQ=60)

                                            CCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAAC                                                   <  SRR4302540.8847865/94‑1 (MQ=60)

                                             CATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACC                                                  <  SRR4302540.859812/94‑1 (MQ=60)

                                              ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA                                                 >  SRR4302540.10075376/1‑94 (MQ=60)

                                              ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA                                                 <  SRR4302540.2674796/94‑1 (MQ=60)

                                              ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA                                                 >  SRR4302540.10075375/1‑94 (MQ=60)

                                              ATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCA                                                 >  SRR4302540.6229915/1‑94 (MQ=60)

                                               TTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCAT                                                <  SRR4302540.4874410/94‑1 (MQ=60)

                                               TTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCAT                                                <  SRR4302540.7827829/94‑1 (MQ=60)

                                               TTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCAT                                                <  SRR4302540.7400164/94‑1 (MQ=60)

                                                TATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATT                                               >  SRR4302540.3884137/1‑94 (MQ=60)

                                                TATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATT                                               <  SRR4302540.7550390/94‑1 (MQ=60)

                                                 ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG                                              >  SRR4302540.6678583/1‑94 (MQ=60)

                                                 ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG                                              >  SRR4302540.5085970/1‑94 (MQ=60)

                                                 ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG                                              >  SRR4302540.4960573/1‑94 (MQ=60)

                                                 ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG                                              <  SRR4302540.4654517/94‑1 (MQ=60)

                                                 ATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTG                                              <  SRR4302540.7955176/94‑1 (MQ=60)

                                                  TGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGG                                             >  SRR4302540.1874255/1‑94 (MQ=60)

                                                  TGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGG                                             <  SRR4302540.1461374/94‑1 (MQ=60)

                                                  TGGCGTTGGCGAAAAAGCATAATTTGTTGGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGG                                             <  SRR4302540.9592172/94‑1 (MQ=60)

                                                   GGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGT                                            <  SRR4302540.3786773/94‑1 (MQ=60)

                                                   GGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGT                                            <  SRR4302540.4908896/94‑1 (MQ=60)

                                                    GCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTC                                           <  SRR4302540.1260521/94‑1 (MQ=60)

                                                     CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGTGCGTGCACTGGGAACCATTGGTCA                                          >  SRR4302540.331228/1‑94 (MQ=60)

                                                     CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCA                                          <  SRR4302540.6963338/94‑1 (MQ=60)

                                                     CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCA                                          <  SRR4302540.6963337/94‑1 (MQ=60)

                                                     CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCA                                          >  SRR4302540.1054643/1‑94 (MQ=60)

                                                     CGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGGGCACTGGGAACCATTGGTCA                                          >  SRR4302540.8698578/1‑94 (MQ=60)

                                                      GTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCAT                                         >  SRR4302540.1753305/1‑94 (MQ=60)

                                                      GTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCAT                                         >  SRR4302540.5765677/1‑94 (MQ=60)

                                                        TGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAT                                       <  SRR4302540.7390766/94‑1 (MQ=60)

                                                        TGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAT                                       <  SRR4302540.6861088/94‑1 (MQ=60)

                                                        TGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATAT                                       <  SRR4302540.3329509/94‑1 (MQ=60)

                                                         GGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATT                                      <  SRR4302540.5992764/94‑1 (MQ=60)

                                                         GGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATT                                      <  SRR4302540.5765727/94‑1 (MQ=60)

                                                         GGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATT                                      <  SRR4302540.1481383/94‑1 (MQ=60)

                                                          GCGAAAAAGCATAATTTGTTTGTGGTAGACGATGCTGCTACGGCCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTG                                     <  SRR4302540.5224557/94‑1 (MQ=60)

                                                          GCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTG                                     <  SRR4302540.684604/94‑1 (MQ=60)

                                                          GCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTG                                     <  SRR4302540.3666810/94‑1 (MQ=60)

                                                          GCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTG                                     <  SRR4302540.2306244/94‑1 (MQ=60)

                                                           CGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGG                                    <  SRR4302540.6401469/94‑1 (MQ=60)

                                                            GAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGC                                   >  SRR4302540.9441480/1‑94 (MQ=60)

                                                            GAAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGAGTGCACTGGGAACCATTGGTCATATTGGC                                   >  SRR4302540.5685441/1‑94 (MQ=60)

                                                             AAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCT                                  <  SRR4302540.2480648/94‑1 (MQ=60)

                                                             AAAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCT                                  <  SRR4302540.2597024/94‑1 (MQ=60)

                                                              AAAAGCATAATTTGTTTGTGGTAGAAGGTGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTG                                 <  SRR4302540.5380353/94‑1 (MQ=60)

                                                              AAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTG                                 >  SRR4302540.5631144/1‑94 (MQ=60)

                                                              AAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTG                                 >  SRR4302540.3057433/1‑94 (MQ=60)

                                                              AAAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTG                                 >  SRR4302540.8466685/1‑94 (MQ=60)

                                                               AAAGCATAATTTGTTTGTTGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGC                                <  SRR4302540.2323867/94‑1 (MQ=60)

                                                               AAAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGC                                <  SRR4302540.4272726/94‑1 (MQ=60)

                                                                AAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCT                               >  SRR4302540.1527313/1‑94 (MQ=60)

                                                                AAGCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCT                               >  SRR4302540.2762078/1‑94 (MQ=60)

                                                                  GCATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTT                             <  SRR4302540.4687359/94‑1 (MQ=60)

                                                                   CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTA                            <  SRR4302540.3757047/94‑1 (MQ=60)

                                                                   CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTA                            <  SRR4302540.7435708/94‑1 (MQ=60)

                                                                   CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTA                            >  SRR4302540.828299/1‑94 (MQ=60)

                                                                   CATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTA                            <  SRR4302540.6805180/94‑1 (MQ=60)

                                                                    ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG                           >  SRR4302540.6539979/1‑94 (MQ=60)

                                                                    ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG                           >  SRR4302540.2210256/1‑94 (MQ=60)

                                                                    ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG                           >  SRR4302540.4126584/1‑94 (MQ=60)

                                                                    ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG                           <  SRR4302540.5360860/94‑1 (MQ=60)

                                                                    ATAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAG                           <  SRR4302540.8008479/94‑1 (MQ=60)

                                                                     TAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGC                          <  SRR4302540.1660283/94‑1 (MQ=60)

                                                                     TAATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGC                          >  SRR4302540.3369897/1‑94 (MQ=60)

                                                                      AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTTGGACACATTGGTCATATTGGCTGCTTTTGCT                         >  SRR4302540.9126895/1‑94 (MQ=60)

                                                                      AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT                         >  SRR4302540.9126894/1‑94 (MQ=60)

                                                                      AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT                         >  SRR4302540.7747361/1‑94 (MQ=60)

                                                                      AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT                         <  SRR4302540.1152282/94‑1 (MQ=60)

                                                                      AATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCT                         <  SRR4302540.6253306/94‑1 (MQ=60)

                                                                       ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT                        <  SRR4302540.7227737/94‑1 (MQ=60)

                                                                       ATTTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTT                        >  SRR4302540.3742418/1‑94 (MQ=60)

                                                                         TTGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCC                      >  SRR4302540.5877390/1‑94 (MQ=60)

                                                                          TGTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCT                     >  SRR4302540.8392697/1‑94 (MQ=60)

                                                                          TGTTTGT‑GTAGAAGATGCTGCTCAGGGCGTGTTGTCCCCTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGGTTTAACTTCCAT                    >  SRR4302540.8014777/1‑94 (MQ=60)

                                                                           GTTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCAT                    <  SRR4302540.695722/94‑1 (MQ=60)

                                                                            TTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATG                   >  SRR4302540.7898243/1‑94 (MQ=60)

                                                                            TTTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATG                   >  SRR4302540.1095731/1‑94 (MQ=60)

                                                                             TTGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGA                  >  SRR4302540.7827762/1‑94 (MQ=60)

                                                                              TGTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAA                 >  SRR4302540.6476177/1‑94 (MQ=60)

                                                                               GTGGTAGAAGATGCTTCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAA                <  SRR4302540.8485458/94‑1 (MQ=60)

                                                                               GTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAA                >  SRR4302540.3465249/1‑94 (MQ=60)

                                                                               GTGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACAATTGGTCATATTGGCTGCTTTCGCTTCCATGAAA                >  SRR4302540.448751/1‑94 (MQ=60)

                                                                                TGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAC               <  SRR4302540.3246918/94‑1 (MQ=60)

                                                                                GGGTAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAAC               <  SRR4302540.6103478/94‑1 (MQ=60)

                                                                                   TAGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAA            <  SRR4302540.5067385/94‑1 (MQ=60)

                                                                                    AGAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAA           <  SRR4302540.1284558/94‑1 (MQ=60)

                                                                                     GAAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAA          >  SRR4302540.8755574/1‑94 (MQ=60)

                                                                                      AAGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAA         >  SRR4302540.4434733/1‑94 (MQ=60)

                                                                                       AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC        <  SRR4302540.6190526/94‑1 (MQ=60)

                                                                                       AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC        <  SRR4302540.8519603/94‑1 (MQ=60)

                                                                                       AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC        <  SRR4302540.5212574/94‑1 (MQ=60)

                                                                                       AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC        <  SRR4302540.1284030/94‑1 (MQ=60)

                                                                                       AGATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAAC        <  SRR4302540.6000021/94‑1 (MQ=60)

                                                                                        GATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACT       <  SRR4302540.2731951/94‑1 (MQ=60)

                                                                                        GATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACT       <  SRR4302540.3830052/94‑1 (MQ=60)

                                                                                         ATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGGTTTAGCTTCCATTAAACAAAAAACTA      >  SRR4302540.5311326/1‑94 (MQ=60)

                                                                                         ATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA      >  SRR4302540.7778018/1‑94 (MQ=60)

                                                                                         ATGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTA      >  SRR4302540.1697075/1‑94 (MQ=60)

                                                                                          TGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTAC     <  SRR4302540.6340718/94‑1 (MQ=60)

                                                                                          TGCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTAC     <  SRR4302540.963382/94‑1 (MQ=60)

                                                                                           GCTGCTCAGGGCGTGATGTCCAGTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA    <  SRR4302540.4648835/94‑1 (MQ=60)

                                                                                           GCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA    <  SRR4302540.9193142/94‑1 (MQ=60)

                                                                                           GCTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACA    >  SRR4302540.8532599/1‑94 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.3587485/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.3661458/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   >  SRR4302540.6045523/1‑94 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.9174194/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   >  SRR4302540.2882087/1‑94 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.6192097/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.4517580/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.2632949/94‑1 (MQ=60)

                                                                                            CTGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACAC   <  SRR4302540.8046526/94‑1 (MQ=60)

                                                                                             TGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG  <  SRR4302540.1238069/94‑1 (MQ=60)

                                                                                             TGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG  <  SRR4302540.9389779/94‑1 (MQ=60)

                                                                                             TGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG  <  SRR4302540.4777495/94‑1 (MQ=60)

TATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACG  >  NC_000913/3973123‑3973309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`