Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,985,741	T→C	V313V (GTA→GTG)	hemX ←	uroporphyrinogen III methylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,985,741	0	T	C	99.8%	1300.4 / ‑5.1	407	V313V (GTA→GTG)	hemX	uroporphyrinogen III methylase
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (223/183); total (224/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.78e-01

Only 100 of 429 total aligned reads displayed.

AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG  >  NC_000913/3985652‑3985830

aGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAcc                                                                                        >  2:5393125/1‑93 (MQ=255)

 gATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAccc                                                                                       >  2:8862453/1‑93 (MQ=255)

  aTCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCa                                                                                      >  1:3909353/1‑93 (MQ=255)

   tCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAg                                                                                     >  1:6617275/1‑93 (MQ=255)

   tCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAg                                                                                     <  1:7172564/93‑1 (MQ=255)

    ccATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAgg                                                                                    >  1:4590066/1‑93 (MQ=255)

     cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt                                                                                   <  2:1545843/93‑1 (MQ=255)

     cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt                                                                                   >  2:5045799/1‑93 (MQ=255)

     cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt                                                                                   <  2:9715504/93‑1 (MQ=255)

      aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTg                                                                                  <  2:8532203/93‑1 (MQ=255)

      aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTg                                                                                  >  1:5186109/1‑93 (MQ=255)

      aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGGGGTGGCATCATCAGGATCGTAGTAAGCACGCACCCAGGTg                                                                                  >  1:7943401/1‑93 (MQ=255)

       tCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTgg                                                                                 >  1:7523501/1‑93 (MQ=255)

       tCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTgg                                                                                 >  2:8207477/1‑93 (MQ=255)

        cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTggg                                                                                >  1:7773386/1‑92 (MQ=255)

        cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGga                                                                                <  1:9775407/93‑1 (MQ=255)

        cGAGATATTTTGCTGGCTGAACCGGTCCCCCTCGTCGAGGAACCCTTTGGTGGTGGCATCAGCAGTATCGTAGTAAGCACGCACCCAGGTGga                                                                                <  1:6443171/93‑1 (MQ=255)

          agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga                                                                              <  2:560384/93‑1 (MQ=255)

           gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc                                                                             >  1:8454310/1‑93 (MQ=255)

            atatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGAACCCAGGGGGAGACg                                                                            >  2:403788/1‑93 (MQ=255)

              atTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGtt                                                                          <  1:93823/93‑1 (MQ=255)

               ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtc                                                                         >  2:3745174/1‑93 (MQ=255)

                  tGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTcc                                                                      <  1:2043377/93‑1 (MQ=255)

                  tGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTcc                                                                      <  1:8557673/93‑1 (MQ=255)

                   gCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCa                                                                     <  2:7310253/93‑1 (MQ=255)

                     tGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgc                                                                   <  1:1346223/93‑1 (MQ=255)

                      ggCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgcg                                                                  >  2:44242/1‑93 (MQ=255)

                       gcctAACTGGTCCCCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgcgc                                                                 <  1:2710381/90‑1 (MQ=255)

                        cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc                                                                <  1:8276720/93‑1 (MQ=255)

                        cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc                                                                <  2:4291673/93‑1 (MQ=255)

                         ttAACTGGTCCCCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt                                                               <  1:3102907/93‑1 (MQ=255)

                          tAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTg                                                              >  2:6619219/1‑93 (MQ=255)

                          tAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTg                                                              >  1:3347670/1‑93 (MQ=255)

                           aaCTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTgg                                                             >  1:8159475/1‑93 (MQ=255)

                            aCTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGc                                                            >  2:7880420/1‑93 (MQ=255)

                               ggTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAt                                                         >  2:1979440/1‑93 (MQ=255)

                               ggTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAt                                                         <  1:5329976/93‑1 (MQ=255)

                                gtgcACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa                                                        <  1:4760283/90‑1 (MQ=255)

                                gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa                                                        <  1:6849641/93‑1 (MQ=255)

                                gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa                                                        <  1:1273986/93‑1 (MQ=255)

                                gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa                                                        <  1:2005821/93‑1 (MQ=255)

                                 tCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATaa                                                       >  1:432284/1‑93 (MQ=255)

                                   cACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGt                                                     >  2:2284492/1‑93 (MQ=255)

                                   cACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGt                                                     >  1:8891667/1‑93 (MQ=255)

                                    aCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGGCGTTCTCCAGCGCCTGCCGATAAGtc                                                    >  1:2281173/1‑93 (MQ=255)

                                    aCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc                                                    >  1:5723513/1‑93 (MQ=255)

                                    aCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc                                                    >  2:1247833/1‑93 (MQ=255)

                                     ccTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtct                                                   >  1:1517952/1‑93 (MQ=255)

                                      cTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc                                                  >  2:9049642/1‑93 (MQ=255)

                                       ccgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct                                                 <  1:5781284/92‑1 (MQ=255)

                                       ccgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct                                                 <  2:2888401/92‑1 (MQ=255)

                                        cgtcgAGGAACGCTTTGGTGGTGGCATCATCAGAATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGCCTCtt                                                >  2:5183285/1‑93 (MQ=255)

                                           cgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCt                                             >  2:7410965/1‑93 (MQ=255)

                                            gAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTg                                            >  2:8353793/1‑93 (MQ=255)

                                             aGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTgg                                           >  2:3528032/1‑93 (MQ=255)

                                                aaCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGa                                        <  2:3637514/93‑1 (MQ=255)

                                                aaCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGa                                        <  2:9946172/93‑1 (MQ=255)

                                                 aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc                                       >  1:2441965/1‑93 (MQ=255)

                                                 aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc                                       >  1:9144967/1‑93 (MQ=255)

                                                  cGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAcg                                      >  2:9296072/1‑93 (MQ=255)

                                                  cGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAcg                                      >  2:3294178/1‑93 (MQ=255)

                                                     tttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTGCAGCGCCTGGCGATAAGTATCTTCCTGGTGACGCgg                                   >  1:10034804/1‑93 (MQ=255)

                                                      ttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGt                                  >  2:6735907/1‑93 (MQ=255)

                                                      ttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGt                                  >  2:4629190/1‑93 (MQ=255)

                                                      ttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTATCTTCCTGGTGACGCGGt                                  >  2:6905427/1‑93 (MQ=255)

                                                       tggtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTa                                 <  1:2857011/93‑1 (MQ=255)

                                                       tggtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGAGACGCGGTa                                 >  1:2559276/1‑93 (MQ=255)

                                                        ggtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTAc                                <  2:2461615/93‑1 (MQ=255)

                                                         gtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACa                               <  1:6565710/93‑1 (MQ=255)

                                                          tggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAg                              >  2:9584662/1‑93 (MQ=255)

                                                             tggCATCATCAGTATCGTAGTAAGCACGCTCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt                           <  1:604394/93‑1 (MQ=255)

                                                             tggCATCATCAGTATCGTAGTAAGCACGCCCCCAGGTCGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt                           <  1:1887943/93‑1 (MQ=255)

                                                              ggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtg                          >  1:5602305/1‑93 (MQ=255)

                                                               gCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgt                         >  2:1066279/1‑93 (MQ=255)

                                                                catcatCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgtg                        >  2:737625/1‑93 (MQ=255)

                                                                 atcatcAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgc                       >  2:4814085/1‑93 (MQ=255)

                                                                 atcatcAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgc                       >  1:3719021/1‑93 (MQ=255)

                                                                 atcatcAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgc                       >  2:710868/1‑93 (MQ=255)

                                                                        gTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAcc                >  2:4886703/1‑93 (MQ=255)

                                                                         tATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAccc               >  1:8734260/1‑92 (MQ=255)

                                                                          aTCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcag              >  1:7002448/1‑93 (MQ=255)

                                                                          aTCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcag              <  2:4185268/93‑1 (MQ=255)

                                                                          aTCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcag              <  1:2544598/93‑1 (MQ=255)

                                                                           tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAAGCGGTACAGCTTGTGCTGCGACcagc             >  2:3425519/1‑93 (MQ=255)

                                                                           tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCGCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagc             <  1:5872627/93‑1 (MQ=255)

                                                                             gtagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagcag           <  2:4578214/93‑1 (MQ=255)

                                                                             gtagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagcag           >  1:9721898/1‑93 (MQ=255)

                                                                              tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg          >  1:442915/1‑93 (MQ=255)

                                                                              tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg          >  2:620437/1‑93 (MQ=255)

                                                                              tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg          <  2:5781707/93‑1 (MQ=255)

                                                                              tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg          >  1:7361433/1‑93 (MQ=255)

                                                                              aagtaAGCCCGCACCCAGGAGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGCGACGCGGTACAGCTTGTGCTGCGAGCAGCAgg          >  2:3053291/2‑93 (MQ=255)

                                                                               agtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGc         <  1:4921582/93‑1 (MQ=255)

                                                                               agtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGc         >  1:6253309/1‑93 (MQ=255)

                                                                                 taAGCATGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga       <  1:7612411/93‑1 (MQ=255)

                                                                                 taAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga       <  1:4087306/93‑1 (MQ=255)

                                                                                  aaGCCCGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgag      <  2:1859167/93‑1 (MQ=255)

                                                                                  aaGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgag      <  2:1465367/93‑1 (MQ=255)

                                                                                  aaGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgag      >  2:1735723/1‑93 (MQ=255)

                                                                                   aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGATGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga     <  2:6098439/93‑1 (MQ=255)

AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG  >  NC_000913/3985652‑3985830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.

CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA  >  NC_000913/3985648‑3985834

CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC                                                                                               >  SRR4302540.9391000/1‑94 (MQ=60)

CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC                                                                                               <  SRR4302540.3816191/94‑1 (MQ=60)

CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC                                                                                               <  SRR4302540.3622367/94‑1 (MQ=60)

 GGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCA                                                                                              >  SRR4302540.4920749/1‑94 (MQ=60)

  GAAGATCCATCGAGCTATTTTCCTGGCTTAACTGGTCCACCGCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAC                                                                                             <  SRR4302540.3562865/94‑1 (MQ=60)

  GAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAC                                                                                             <  SRR4302540.3562866/94‑1 (MQ=60)

   AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACC                                                                                            >  SRR4302540.4648404/1‑94 (MQ=60)

   AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACC                                                                                            >  SRR4302540.2470397/1‑94 (MQ=60)

   AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACC                                                                                            >  SRR4302540.2866418/1‑94 (MQ=60)

    AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCC                                                                                           >  SRR4302540.9183700/1‑94 (MQ=60)

     GATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCA                                                                                          >  SRR4302540.1469637/1‑94 (MQ=60)

     GATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCA                                                                                          >  SRR4302540.7154637/1‑94 (MQ=60)

     GATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGGCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCA                                                                                          <  SRR4302540.5030312/94‑1 (MQ=60)

      ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG                                                                                         <  SRR4302540.10064855/94‑1 (MQ=60)

      ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG                                                                                         <  SRR4302540.1018913/94‑1 (MQ=60)

      ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG                                                                                         >  SRR4302540.6690558/1‑94 (MQ=60)

      ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG                                                                                         >  SRR4302540.3720164/1‑94 (MQ=60)

      ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG                                                                                         >  SRR4302540.10089916/1‑94 (MQ=60)

       TCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGG                                                                                        <  SRR4302540.7252514/94‑1 (MQ=60)

       TCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGG                                                                                        >  SRR4302540.2194319/1‑94 (MQ=60)

       TCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGG                                                                                        >  SRR4302540.4639478/1‑94 (MQ=60)

         CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG                                                                                      >  SRR4302540.5242568/1‑94 (MQ=60)

         CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG                                                                                      >  SRR4302540.8177809/1‑94 (MQ=60)

         CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGGGGTGGCATCATCAGGATCGTAGTAAGCACGCACCCAGGTG                                                                                      >  SRR4302540.8035986/1‑94 (MQ=60)

          ATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGG                                                                                     >  SRR4302540.7607666/1‑94 (MQ=60)

          ATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGG                                                                                     >  SRR4302540.611143/1‑94 (MQ=60)

           TCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGG                                                                                    >  SRR4302540.7864256/1‑94 (MQ=60)

           TCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGA                                                                                    <  SRR4302540.261619/94‑1 (MQ=60)

           TCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGA                                                                                    >  SRR4302540.7864255/1‑94 (MQ=60)

            CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG                                                                                   <  SRR4302540.9889998/94‑1 (MQ=60)

            CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG                                                                                   <  SRR4302540.6514889/94‑1 (MQ=60)

            CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGGGGAG                                                                                   >  SRR4302540.1134133/1‑94 (MQ=60)

            CGAGATATTTTGCTGGCTGAACCGGTCCCCCTCGTCGAGGAACCCTTTGGTGGTGGCATCAGCAGTATCGTAGTAAGCACGCACCCAGGTGGAG                                                                                   <  SRR4302540.6514888/94‑1 (MQ=60)

            CGAGATATTGTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG                                                                                   <  SRR4302540.9889995/94‑1 (MQ=60)

             GAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGA                                                                                  <  SRR4302540.2304123/94‑1 (MQ=60)

              AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC                                                                                 <  SRR4302540.3371958/94‑1 (MQ=60)

              AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC                                                                                 >  SRR4302540.8552472/1‑94 (MQ=60)

              AGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAC                                                                                 >  SRR4302540.8563794/1‑94 (MQ=60)

               GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG                                                                                <  SRR4302540.6526225/94‑1 (MQ=60)

               GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG                                                                                <  SRR4302540.6945451/94‑1 (MQ=60)

               GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG                                                                                <  SRR4302540.8808551/94‑1 (MQ=60)

               GATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACG                                                                                >  SRR4302540.6859658/1‑94 (MQ=60)

                ATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGT                                                                               >  SRR4302540.4363810/1‑94 (MQ=60)

                  ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC                                                                             <  SRR4302540.94819/94‑1 (MQ=60)

                  ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC                                                                             >  SRR4302540.5158597/1‑94 (MQ=60)

                  ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC                                                                             >  SRR4302540.8952969/1‑94 (MQ=60)

                     TTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCC                                                                          >  SRR4302540.530416/1‑94 (MQ=60)

                      TGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCA                                                                         <  SRR4302540.2065388/94‑1 (MQ=60)

                      TGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCA                                                                         <  SRR4302540.8657073/94‑1 (MQ=60)

                      TGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCA                                                                         <  SRR4302540.596758/94‑1 (MQ=60)

                        CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC                                                                       <  SRR4302540.1437087/94‑1 (MQ=60)

                        CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC                                                                       <  SRR4302540.854942/94‑1 (MQ=60)

                        CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC                                                                       <  SRR4302540.1352855/94‑1 (MQ=60)

                        CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC                                                                       <  SRR4302540.2839831/94‑1 (MQ=60)

                         TGGCTTAACTGGTCCCCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCG                                                                      <  SRR4302540.7544731/94‑1 (MQ=60)

                         TGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCG                                                                      <  SRR4302540.1360361/94‑1 (MQ=60)

                          GGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGC                                                                     >  SRR4302540.2014954/1‑94 (MQ=60)

                          GGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGC                                                                     >  SRR4302540.960765/1‑94 (MQ=60)

                           GCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCC                                                                    <  SRR4302540.9886417/94‑1 (MQ=60)

                           GCCTAACTGGTCCCCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCC                                                                    <  SRR4302540.2739609/94‑1 (MQ=60)

                            CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAATCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT                                                                   >  SRR4302540.4654587/1‑94 (MQ=60)

                            CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT                                                                   <  SRR4302540.7635543/94‑1 (MQ=60)

                            CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT                                                                   <  SRR4302540.8372865/94‑1 (MQ=60)

                             TTAACTGGTCCCCCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG                                                                  <  SRR4302540.3136884/94‑1 (MQ=60)

                             TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG                                                                  >  SRR4302540.4464134/1‑94 (MQ=60)

                             TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG                                                                  >  SRR4302540.3384384/1‑94 (MQ=60)

                             TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG                                                                  >  SRR4302540.7514418/1‑94 (MQ=60)

                             TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG                                                                  <  SRR4302540.9735145/94‑1 (MQ=60)

                             TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCCCCTG                                                                  >  SRR4302540.3894578/1‑94 (MQ=60)

                              TAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGG                                                                 >  SRR4302540.7363695/1‑94 (MQ=60)

                              TAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGG                                                                 <  SRR4302540.4140466/94‑1 (MQ=60)

                               AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC                                                                <  SRR4302540.5783985/94‑1 (MQ=60)

                               AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC                                                                >  SRR4302540.814364/1‑94 (MQ=60)

                               AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC                                                                >  SRR4302540.82347/1‑94 (MQ=60)

                               AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC                                                                <  SRR4302540.5530854/94‑1 (MQ=60)

                               AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC                                                                >  SRR4302540.206678/1‑94 (MQ=60)

                                 CTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGA                                                              >  SRR4302540.5348555/1‑94 (MQ=60)

                                  TGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAT                                                             >  SRR4302540.8326012/1‑94 (MQ=60)

                                    GTGCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           <  SRR4302540.4811081/94‑1 (MQ=60)

                                    GTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           <  SRR4302540.2027530/94‑1 (MQ=60)

                                    GTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           <  SRR4302540.1287112/94‑1 (MQ=60)

                                    GTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           >  SRR4302540.436856/1‑94 (MQ=60)

                                    GTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           >  SRR4302540.4828105/1‑94 (MQ=60)

                                    GTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAA                                                           <  SRR4302540.6925524/94‑1 (MQ=60)

                                      CCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGT                                                         >  SRR4302540.3998444/1‑94 (MQ=60)

                                       CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGGCGTTCTCCAGCGCCTGCCGATAAGTC                                                        >  SRR4302540.2305680/1‑94 (MQ=60)

                                       CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC                                                        >  SRR4302540.9454513/1‑94 (MQ=60)

                                       CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC                                                        <  SRR4302540.6797395/94‑1 (MQ=60)

                                       CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC                                                        >  SRR4302540.5786517/1‑94 (MQ=60)

                                        ACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT                                                       >  SRR4302540.1683713/1‑94 (MQ=60)

                                        ACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT                                                       >  SRR4302540.8455496/1‑94 (MQ=60)

                                        ACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCT                                                       <  SRR4302540.9963761/94‑1 (MQ=60)

                                         CCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTC                                                      >  SRR4302540.8983801/1‑94 (MQ=60)

                                         CCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTC                                                      >  SRR4302540.701660/1‑94 (MQ=60)

                                         CCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTC                                                      >  SRR4302540.7007395/1‑94 (MQ=60)

                                          CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT                                                     <  SRR4302540.525934/94‑1 (MQ=60)

                                          CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT                                                     >  SRR4302540.7951113/1‑94 (MQ=60)

                                          CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT                                                     >  SRR4302540.2285480/1‑94 (MQ=60)

                                          CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT                                                     >  SRR4302540.9027095/1‑94 (MQ=60)

                                           TCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT                                                    <  SRR4302540.7705919/94‑1 (MQ=60)

                                           CCGTCGAGGACCGCTTTGGTGGTGGCATCATCAGGATCGTAGTAAGCACGCACCCAGGTGAAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT                                                    <  SRR4302540.5845149/94‑1 (MQ=60)

                                           CCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT                                                    <  SRR4302540.5845150/94‑1 (MQ=60)

                                            CGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTGAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTC                                                   <  SRR4302540.2973936/94‑1 (MQ=60)

                                            CGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTC                                                   >  SRR4302540.2446241/1‑94 (MQ=60)

                                             GTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCC                                                  <  SRR4302540.8676833/94‑1 (MQ=60)

                                             GTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCC                                                  >  SRR4302540.9947650/1‑94 (MQ=60)

                                             GTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCC                                                  >  SRR4302540.9782960/1‑94 (MQ=60)

                                             GTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCC                                                  <  SRR4302540.4651012/94‑1 (MQ=60)

                                              TCGAGTAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT                                                 <  SRR4302540.2583213/94‑1 (MQ=60)

                                              TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT                                                 <  SRR4302540.1470088/94‑1 (MQ=60)

                                              GCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT                                                 <  SRR4302540.2583218/94‑1 (MQ=60)

                                               CGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTG                                                <  SRR4302540.5925529/94‑1 (MQ=60)

                                               CGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTG                                                >  SRR4302540.8268457/1‑94 (MQ=60)

                                               CGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTG                                                >  SRR4302540.8446442/1‑94 (MQ=60)

                                               CGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTG                                                >  SRR4302540.310966/1‑94 (MQ=60)

                                               CGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTG                                                >  SRR4302540.4407455/1‑94 (MQ=60)

                                                 AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGG                                              >  SRR4302540.3087109/1‑94 (MQ=60)

                                                    AACTCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC                                           <  SRR4302540.8076551/94‑1 (MQ=60)

                                                    AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC                                           >  SRR4302540.2468260/1‑94 (MQ=60)

                                                    AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC                                           >  SRR4302540.9254814/1‑94 (MQ=60)

                                                      CGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGGGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGC                                         <  SRR4302540.3773338/94‑1 (MQ=60)

                                                      CGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGC                                         >  SRR4302540.7516614/1‑94 (MQ=60)

                                                       GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG                                        <  SRR4302540.1261095/94‑1 (MQ=60)

                                                       GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG                                        <  SRR4302540.3958939/94‑1 (MQ=60)

                                                       GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG                                        >  SRR4302540.2738233/1‑94 (MQ=60)

                                                        CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTGCAGCGCCTGGCGATAAGTATCTTCCTGGTGACGCGG                                       >  SRR4302540.10151513/1‑94 (MQ=60)

                                                        CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGG                                       >  SRR4302540.5838058/1‑94 (MQ=60)

                                                        CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGG                                       <  SRR4302540.7392072/94‑1 (MQ=60)

                                                          TTGGTGGTGGCCTCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTA                                     <  SRR4302540.9014273/94‑1 (MQ=60)

                                                          TTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTA                                     >  SRR4302540.2586858/1‑94 (MQ=60)

                                                          TTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGAGACGCGGTA                                     >  SRR4302540.2586859/1‑94 (MQ=60)

                                                           TGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTAC                                    >  SRR4302540.3771330/1‑94 (MQ=60)

                                                             GTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAG                                  >  SRR4302540.2505026/1‑94 (MQ=60)

                                                             GTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAG                                  >  SRR4302540.6249722/1‑94 (MQ=60)

                                                             GTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAG                                  >  SRR4302540.20141/1‑94 (MQ=60)

                                                             GTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAG                                  <  SRR4302540.9837869/94‑1 (MQ=60)

                                                              TGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGC                                 >  SRR4302540.767957/1‑94 (MQ=60)

                                                              TGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGC                                 <  SRR4302540.7388784/94‑1 (MQ=60)

                                                              TGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGC                                 <  SRR4302540.5477292/94‑1 (MQ=60)

                                                              GGGTGGCATCATCAGTATCGTAGTAAGCACGCCCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGC                                 <  SRR4302540.5477293/94‑1 (MQ=60)

                                                                 TGGCATCATCAGTATCGTAGTAAGCACGCTCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG                              <  SRR4302540.610863/94‑1 (MQ=60)

                                                                 TGGCATCATCAGTATCGTAGTAAGCACGCCCCCAGGTCGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG                              <  SRR4302540.1908611/94‑1 (MQ=60)

                                                                 TGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG                              >  SRR4302540.5663950/1‑94 (MQ=60)

                                                                 TGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTG                              >  SRR4302540.5663948/1‑94 (MQ=60)

                                                                  GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT                             >  SRR4302540.7057323/1‑94 (MQ=60)

                                                                  GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT                             <  SRR4302540.8942901/94‑1 (MQ=60)

                                                                  GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT                             <  SRR4302540.6669567/94‑1 (MQ=60)

                                                                   GCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTG                            >  SRR4302540.3381130/1‑94 (MQ=60)

                                                                    CATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGC                           >  SRR4302540.3759599/1‑94 (MQ=60)

                                                                    CATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGC                           >  SRR4302540.2461608/1‑94 (MQ=60)

                                                                     ATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCT                          >  SRR4302540.1325853/1‑94 (MQ=60)

                                                                     ATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCT                          >  SRR4302540.2051642/1‑94 (MQ=60)

                                                                      TCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTG                         <  SRR4302540.1635528/94‑1 (MQ=60)

                                                                       CATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGC                        >  SRR4302540.4578604/1‑94 (MQ=60)

                                                                        ATCAGTATCGTAGTAAGCACGCACCCAGGTGGGGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG                       >  SRR4302540.1604446/1‑94 (MQ=60)

                                                                        ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG                       >  SRR4302540.9492001/1‑94 (MQ=60)

                                                                        ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG                       <  SRR4302540.6524331/94‑1 (MQ=60)

                                                                        ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG                       >  SRR4302540.5828048/1‑94 (MQ=60)

                                                                          CAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAC                     <  SRR4302540.1588033/94‑1 (MQ=60)

                                                                           AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC                    <  SRR4302540.4439908/94‑1 (MQ=60)

                                                                            GTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCC                   >  SRR4302540.8835680/1‑94 (MQ=60)

                                                                            GTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCA                   <  SRR4302540.4892659/94‑1 (MQ=60)

                                                                            GTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCA                   >  SRR4302540.5933791/1‑94 (MQ=60)

                                                                             TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG                  >  SRR4302540.7080146/1‑94 (MQ=60)

                                                                             TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG                  >  SRR4302540.6007584/1‑94 (MQ=60)

                                                                              ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC                 >  SRR4302540.6492868/1‑94 (MQ=60)

                                                                              ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC                 <  SRR4302540.2572025/94‑1 (MQ=60)

                                                                               TCGTAGTAAGCACGCGCCCAGGTGGAGACGTTCACCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCA                <  SRR4302540.5937538/94‑1 (MQ=60)

                                                                               TCGTAGTAAGCACGCACCCAGGTGGAGACGTTCGCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCA                <  SRR4302540.5937539/94‑1 (MQ=60)

                                                                                CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG               >  SRR4302540.6652920/1‑94 (MQ=60)

                                                                                CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG               >  SRR4302540.6652921/1‑94 (MQ=60)

                                                                                CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG               >  SRR4302540.2696825/1‑94 (MQ=60)

                                                                                CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG               <  SRR4302540.8594336/94‑1 (MQ=60)

                                                                                 GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG              >  SRR4302540.447635/1‑94 (MQ=60)

                                                                                 GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG              >  SRR4302540.2050257/1‑94 (MQ=60)

                                                                                 GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG              >  SRR4302540.7443517/1‑94 (MQ=60)

                                                                                  TAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC             >  SRR4302540.6322886/1‑94 (MQ=60)

                                                                                  TAGTAAGCACGCACACAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC             <  SRR4302540.8021279/94‑1 (MQ=60)

                                                                                   AGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCG            >  SRR4302540.642277/1‑94 (MQ=60)

                                                                                   AGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCG            <  SRR4302540.4974609/94‑1 (MQ=60)

                                                                                     TAAGCATGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG          <  SRR4302540.7697970/94‑1 (MQ=60)

                                                                                     TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG          <  SRR4302540.4131386/94‑1 (MQ=60)

                                                                                     TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG          >  SRR4302540.6568518/1‑94 (MQ=60)

                                                                                     TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG          <  SRR4302540.5513145/94‑1 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        <  SRR4302540.4604472/94‑1 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        >  SRR4302540.2867863/1‑94 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        <  SRR4302540.8313424/94‑1 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        >  SRR4302540.3746545/1‑94 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        <  SRR4302540.4012708/94‑1 (MQ=60)

                                                                                       AGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAG        >  SRR4302540.413102/1‑94 (MQ=60)

                                                                                        GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC       <  SRR4302540.3217774/94‑1 (MQ=60)

                                                                                        GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC       <  SRR4302540.6174968/94‑1 (MQ=60)

                                                                                        GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC       <  SRR4302540.7791589/94‑1 (MQ=60)

                                                                                        GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC       >  SRR4302540.9268606/1‑94 (MQ=60)

                                                                                         CACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTAACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG      >  SRR4302540.4816156/1‑94 (MQ=60)

                                                                                          ACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGA     >  SRR4302540.576960/1‑94 (MQ=60)

                                                                                          ACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGA     <  SRR4302540.8620777/94‑1 (MQ=60)

                                                                                           CGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAA    >  SRR4302540.2400757/1‑94 (MQ=60)

                                                                                           CGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAA    >  SRR4302540.1640529/1‑94 (MQ=60)

                                                                                             CACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGGGCGAATA  >  SRR4302540.1999816/1‑94 (MQ=60)

CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA  >  NC_000913/3985648‑3985834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`