Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,985,741 |
T→C |
V313V (GTA→GTG) |
hemX ← |
uroporphyrinogen III methylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,985,741 | 0 | T | C | 100.0%
| 737.1
/ NA
| 232 | V313V (GTA→GTG) | hemX | uroporphyrinogen III methylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/120); total (112/120) |
Only 100 of 248 total aligned reads displayed.
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG > NC_000913/3985651‑3985830
|
aaGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAgcacgcac > 2:410691/1‑93 (MQ=255)
gATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAccc > 1:1222867/1‑93 (MQ=255)
tCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCGCCCAg < 2:3217189/93‑1 (MQ=255)
tCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAg < 1:4204225/93‑1 (MQ=255)
tCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAg < 1:1875999/93‑1 (MQ=255)
ccATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAgg < 2:5676856/93‑1 (MQ=255)
cATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGt < 2:266437/93‑1 (MQ=255)
aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTg > 1:1704871/1‑93 (MQ=255)
aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTg > 1:1818146/1‑93 (MQ=255)
aTCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTg > 2:2539644/1‑93 (MQ=255)
tCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTga > 1:1747459/1‑92 (MQ=255)
cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGga < 2:1492403/93‑1 (MQ=255)
cGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGga > 1:6235752/1‑93 (MQ=255)
agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga < 2:2835010/93‑1 (MQ=255)
agaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGgaga > 2:6167658/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTTGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc > 2:4166375/1‑93 (MQ=255)
gaTATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGAc > 2:5800487/1‑93 (MQ=255)
tatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGt > 2:5473878/1‑93 (MQ=255)
tatTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGt > 2:6017739/1‑93 (MQ=255)
atTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGtt < 2:5429053/93‑1 (MQ=255)
ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtc < 2:155656/93‑1 (MQ=255)
ttttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGGGGTGGCATCATCAGTATCGTAGTAAGAACCCACCCAGGGGGAGACGTtc > 2:4340617/1‑93 (MQ=255)
tttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtct < 1:1313084/93‑1 (MQ=255)
ttGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTtctc < 1:2433256/93‑1 (MQ=255)
tGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTcc > 1:3873544/1‑93 (MQ=255)
tcTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCa < 1:618036/92‑1 (MQ=255)
gCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCa < 1:5294362/93‑1 (MQ=255)
cTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAg < 2:1234310/93‑1 (MQ=255)
cTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAg < 1:2574510/93‑1 (MQ=255)
tGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgc > 2:2806049/1‑93 (MQ=255)
tGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAgc > 1:5835127/1‑93 (MQ=255)
cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc > 2:1699948/1‑93 (MQ=255)
cTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGcc < 2:5322410/93‑1 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt > 1:3217191/1‑93 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt < 2:1626543/93‑1 (MQ=255)
ttAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCt > 2:5708261/1‑93 (MQ=255)
tAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTg < 2:76652/93‑1 (MQ=255)
aCTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGc > 1:161276/1‑93 (MQ=255)
tGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGa < 1:2553727/93‑1 (MQ=255)
ggTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAt < 2:3277370/93‑1 (MQ=255)
gTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATa > 2:1093313/1‑93 (MQ=255)
tCCACCTCGTCGAGGAACGCTTTGATGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATaa < 1:4381078/93‑1 (MQ=255)
ccACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAg > 1:3430409/1‑93 (MQ=255)
ccACCTCGTCGAGGAAAGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAg > 2:301634/1‑93 (MQ=255)
cACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGt < 1:2741414/93‑1 (MQ=255)
cccTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtc < 2:1997245/92‑1 (MQ=255)
cTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc < 1:1779289/93‑1 (MQ=255)
cTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc > 2:5168731/1‑93 (MQ=255)
cTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGtctc > 2:4832735/1‑93 (MQ=255)
tcgtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTctct > 1:5097924/1‑93 (MQ=255)
gtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTc < 2:1827457/93‑1 (MQ=255)
gtcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTc > 2:339907/1‑93 (MQ=255)
tcgAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTcc < 1:4609808/93‑1 (MQ=255)
gAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTg < 1:5925262/93‑1 (MQ=255)
aagAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCCCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTgg < 1:5613210/91‑1 (MQ=255)
aGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTgg > 1:5511301/1‑93 (MQ=255)
aGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTgg > 1:828871/1‑93 (MQ=255)
aGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTgg < 2:5534455/93‑1 (MQ=255)
ggAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGt > 2:4959848/1‑93 (MQ=255)
ggAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGt > 1:2405979/1‑93 (MQ=255)
aaCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGa < 1:4950994/93‑1 (MQ=255)
aCGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAc > 1:3941593/1‑93 (MQ=255)
gCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAcgc < 1:1896133/93‑1 (MQ=255)
tttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCgg > 2:4532552/1‑93 (MQ=255)
tttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCgg > 1:609777/1‑93 (MQ=255)
tttGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCgg > 1:4731941/1‑93 (MQ=255)
ggtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTAc > 2:132853/1‑93 (MQ=255)
ggtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTAc < 2:1265148/93‑1 (MQ=255)
gtggtggCATCATCAGTATCGTAGTAAGCACGCGCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACa < 1:6001213/93‑1 (MQ=255)
gtggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACa < 2:326643/93‑1 (MQ=255)
ggtggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGc < 1:3684731/93‑1 (MQ=255)
gtggGATCATCTGTAGCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCt < 2:2382363/93‑1 (MQ=255)
tggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt > 1:1067550/1‑93 (MQ=255)
tggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCtt > 2:1443351/1‑93 (MQ=255)
ggCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtg > 2:4948069/1‑93 (MQ=255)
catcatCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgtg < 1:1211490/93‑1 (MQ=255)
catcatCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgtg > 2:2156926/1‑93 (MQ=255)
catcatCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTtgtg < 2:1012122/93‑1 (MQ=255)
atcatcAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgc < 1:1402484/93‑1 (MQ=255)
atcatcAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgc > 2:202317/1‑93 (MQ=255)
tcatcaGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgct > 1:3502005/1‑93 (MQ=255)
tcatcaGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGtgct < 2:6253658/93‑1 (MQ=255)
tcaGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCg > 1:3613195/1‑93 (MQ=255)
aGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGCTAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAc > 2:2076820/1‑93 (MQ=255)
gTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGAcc > 1:1465306/1‑93 (MQ=255)
tATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACca < 1:3264468/93‑1 (MQ=255)
tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagc > 2:2638975/1‑93 (MQ=255)
tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagc < 2:3519698/93‑1 (MQ=255)
tCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagc > 1:372156/1‑93 (MQ=255)
cGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagca < 1:711757/93‑1 (MQ=255)
cGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACcagca < 1:202230/93‑1 (MQ=255)
tagtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAgg > 2:4734247/1‑93 (MQ=255)
agtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGc < 2:2625148/93‑1 (MQ=255)
agtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGc > 1:2222523/1‑93 (MQ=255)
agtaAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGc > 2:932466/1‑93 (MQ=255)
taAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga < 1:5408555/93‑1 (MQ=255)
taAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCga < 2:5184590/93‑1 (MQ=255)
aaGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgag < 1:3130391/93‑1 (MQ=255)
aGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCgaga < 2:2293194/93‑1 (MQ=255)
gcacgcacCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGagag < 2:3791878/93‑1 (MQ=255)
|
AAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCG > NC_000913/3985651‑3985830
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA > NC_000913/3985648‑3985834
|
CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGC < SRR4302533.2242827/94‑1 (MQ=60)
GGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCA > SRR4302533.608332/1‑94 (MQ=60)
GGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCA < SRR4302533.6286254/94‑1 (MQ=60)
GAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCAC < SRR4302533.5593887/94‑1 (MQ=60)
AGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCC > SRR4302533.1230201/1‑94 (MQ=60)
GATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCA > SRR4302533.2469069/1‑94 (MQ=60)
ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG > SRR4302533.4563004/1‑94 (MQ=60)
ATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAG > SRR4302533.2522562/1‑94 (MQ=60)
TCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGG < SRR4302533.1887433/94‑1 (MQ=60)
TCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGG < SRR4302533.4229658/94‑1 (MQ=60)
CCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGT < SRR4302533.5005408/94‑1 (MQ=60)
CCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGCGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGT > SRR4302533.3442735/1‑94 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG > SRR4302533.3506000/1‑94 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG > SRR4302533.4949866/1‑94 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG > SRR4302533.1715197/1‑94 (MQ=60)
CATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTG > SRR4302533.1829252/1‑94 (MQ=60)
ATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGG > SRR4302533.1758093/1‑94 (MQ=60)
ATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGA > SRR4302533.1758094/1‑94 (MQ=60)
TCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGA > SRR4302533.6273095/1‑94 (MQ=60)
TCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGA < SRR4302533.1002953/94‑1 (MQ=60)
CGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAG > SRR4302533.621365/1‑94 (MQ=60)
GAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGA > SRR4302533.1221058/1‑94 (MQ=60)
ATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTTGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGT > SRR4302533.3633224/1‑94 (MQ=60)
TATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTT > SRR4302533.5870922/1‑94 (MQ=60)
ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC > SRR4302533.596899/1‑94 (MQ=60)
ATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTC > SRR4302533.1672900/1‑94 (MQ=60)
TTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTC < SRR4302533.1320964/94‑1 (MQ=60)
TTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCC < SRR4302533.2448290/94‑1 (MQ=60)
TTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCC > SRR4302533.3897189/1‑94 (MQ=60)
TGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCA < SRR4302533.5516086/94‑1 (MQ=60)
TCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAG < SRR4302533.621660/94‑1 (MQ=60)
GCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAG > SRR4302533.701028/1‑94 (MQ=60)
GCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAG < SRR4302533.5326053/94‑1 (MQ=60)
CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC > SRR4302533.5870389/1‑94 (MQ=60)
CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC < SRR4302533.2590347/94‑1 (MQ=60)
CTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGC > SRR4302533.1710278/1‑94 (MQ=60)
TGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCG > SRR4302533.1819401/1‑94 (MQ=60)
GCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCC < SRR4302533.2444538/94‑1 (MQ=60)
GCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCC > SRR4302533.3982200/1‑94 (MQ=60)
GCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCC > SRR4302533.1774217/1‑94 (MQ=60)
CTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCT > SRR4302533.3237029/1‑94 (MQ=60)
TTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTG < SRR4302533.1363805/94‑1 (MQ=60)
AACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGC > SRR4302533.162303/1‑94 (MQ=60)
CTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGC > SRR4302533.3252770/1‑94 (MQ=60)
CTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGA > SRR4302533.2026278/1‑94 (MQ=60)
TGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGAT < SRR4302533.2569439/94‑1 (MQ=60)
TCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAG > SRR4302533.3451602/1‑94 (MQ=60)
TCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAG < SRR4302533.3231665/94‑1 (MQ=60)
TCCACCTCGTCGAGGAACGCTTTGATGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAG < SRR4302533.4407530/94‑1 (MQ=60)
CCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGT > SRR4302533.2262761/1‑94 (MQ=60)
CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC < SRR4302533.2758224/94‑1 (MQ=60)
CACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTC > SRR4302533.4353564/1‑94 (MQ=60)
CTGGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT < SRR4302533.758591/94‑1 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT < SRR4302533.1790124/94‑1 (MQ=60)
CTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCT > SRR4302533.5128724/1‑94 (MQ=60)
TCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTT < SRR4302533.3307062/94‑1 (MQ=60)
TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302533.4637724/94‑1 (MQ=60)
TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302533.5537938/94‑1 (MQ=60)
TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT < SRR4302533.5331734/94‑1 (MQ=60)
TCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCT > SRR4302533.2679245/1‑94 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.3218212/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG > SRR4302533.5544574/1‑94 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.5961084/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.1890683/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG > SRR4302533.1230313/1‑94 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.5961083/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.6229464/94‑1 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG > SRR4302533.833732/1‑94 (MQ=60)
GAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGG < SRR4302533.2995471/94‑1 (MQ=60)
AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT > SRR4302533.5668751/1‑94 (MQ=60)
AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT > SRR4302533.2420839/1‑94 (MQ=60)
AGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT < SRR4302533.1423996/94‑1 (MQ=60)
AAGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCCCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGT < SRR4302533.5647137/94‑1 (MQ=60)
GGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTG < SRR4302533.5318853/94‑1 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC < SRR4302533.1237256/94‑1 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC > SRR4302533.1873137/1‑94 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC > SRR4302533.3965642/1‑94 (MQ=60)
AACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGAC < SRR4302533.4980978/94‑1 (MQ=60)
ACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGAGCCTGGCGATAAGTCTCTTCCTGGTGACG > SRR4302533.3967628/1‑94 (MQ=60)
GCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCG < SRR4302533.1907704/94‑1 (MQ=60)
CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGG > SRR4302533.613363/1‑94 (MQ=60)
CTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGG > SRR4302533.4760628/1‑94 (MQ=60)
TTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTA < SRR4302533.3693813/94‑1 (MQ=60)
GTGGTGGCATCATCAGTATCGTAGTAAGCACGCGCCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAG < SRR4302533.6037568/94‑1 (MQ=60)
GGTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCT < SRR4302533.3707378/94‑1 (MQ=60)
GTGGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTT > SRR4302533.1073829/1‑94 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT > SRR4302533.3772339/1‑94 (MQ=60)
GGCATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGT < SRR4302533.1884282/94‑1 (MQ=60)
CATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGC < SRR4302533.1218777/94‑1 (MQ=60)
ATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCT > SRR4302533.3523599/1‑94 (MQ=60)
ATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCT > SRR4302533.5196282/1‑94 (MQ=60)
ATCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCT < SRR4302533.1410943/94‑1 (MQ=60)
TCATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTG > SRR4302533.3709081/1‑94 (MQ=60)
ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG < SRR4302533.5558279/94‑1 (MQ=60)
ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG > SRR4302533.3635430/1‑94 (MQ=60)
ATCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCG < SRR4302533.1554197/94‑1 (MQ=60)
TCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGA < SRR4302533.3617520/94‑1 (MQ=60)
TCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGA > SRR4302533.1784737/1‑94 (MQ=60)
TCAGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGA > SRR4302533.4526188/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302533.198685/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302533.633380/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302533.1474142/1‑94 (MQ=60)
AGTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACC > SRR4302533.2573261/1‑94 (MQ=60)
GTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCA > SRR4302533.4925763/1‑94 (MQ=60)
GTATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCA > SRR4302533.6053481/1‑94 (MQ=60)
TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302533.3284605/94‑1 (MQ=60)
TATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAG < SRR4302533.1156140/94‑1 (MQ=60)
ATCGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGC > SRR4302533.374402/1‑94 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG > SRR4302533.1457089/1‑94 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG < SRR4302533.3907059/94‑1 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG < SRR4302533.715960/94‑1 (MQ=60)
CGTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAG < SRR4302533.203512/94‑1 (MQ=60)
GTAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG > SRR4302533.4731702/1‑94 (MQ=60)
GTAGTAAGCACGCACCCAGGGGGAAACGTTCTCCACCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGG < SRR4302533.3750719/94‑1 (MQ=60)
TAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC < SRR4302533.5834799/94‑1 (MQ=60)
TAGTAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGC > SRR4302533.2236252/1‑94 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG < SRR4302533.5441065/94‑1 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG < SRR4302533.996712/94‑1 (MQ=60)
TAAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAG > SRR4302533.2729990/1‑94 (MQ=60)
AAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGA < SRR4302533.6184890/94‑1 (MQ=60)
AAGCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGA < SRR4302533.3149639/94‑1 (MQ=60)
GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC < SRR4302533.23570/94‑1 (MQ=60)
GCACGCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCCCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGC < SRR4302533.2109388/94‑1 (MQ=60)
GCACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAAT < SRR4302533.801933/94‑1 (MQ=60)
CACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA < SRR4302533.4816405/94‑1 (MQ=60)
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CGGAAGATCCATCGAGATATTTTGCTGGCTTAACTGGTCCACCTCGTCGAGGAACGCTTTGGTGGTGGCATCATCAGTATCGTAGTAAGCACGTACCCAGGTGGAGACGTTCTCCAGCGCCTGGCGATAAGTCTCTTCCTGGTGACGCGGTACAGCTTGTGCTGCGACCAGCAGGCGAGAGCGAATA > NC_000913/3985648‑3985834
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
