Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,987,822 2 bp→CG coding (578‑579/963 nt) hemC ← porphobilinogen deaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,987,8220GC100.0% 1112.4 / NA 345G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (177/168);  total (177/168)
*NC_0009133,987,8230CG100.0% 1103.0 / NA 344G193A (GGC→GCG) hemCporphobilinogen deaminase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (176/168);  total (176/168)

Only 100 of 360 total aligned reads displayed.

CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909
                                                                                       ||                                                                                      
   cTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGcgcg                                                                                 <  1:5063250/93‑1 (MQ=255)
     cgcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGaa                                                                               <  2:1120721/93‑1 (MQ=255)
      gcgAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAAt                                                                              >  2:2488812/1‑93 (MQ=255)
        gAGTGCGTGAATCATCAAGTCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            <  1:2105748/93‑1 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            <  1:9114481/93‑1 (MQ=255)
        gAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAc                                                                            <  2:7378911/93‑1 (MQ=255)
          gTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGt                                                                          <  2:6465146/93‑1 (MQ=255)
          gTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGt                                                                          >  1:9835844/1‑93 (MQ=255)
           tGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTg                                                                         >  1:599516/1‑93 (MQ=255)
            gCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGa                                                                        <  2:3475429/93‑1 (MQ=255)
            gCGTGAATCATCAAGGCGACATTCAATACCCACCGCACCTGGTCCTACCGCCGTAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGa                                                                        <  2:5021770/93‑1 (MQ=255)
              gTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACt                                                                      >  1:2958376/1‑93 (MQ=255)
                gAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTcc                                                                    >  1:6770635/1‑93 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATCCCCACCGCGCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCTAATACGTGACTCCa                                                                   <  2:5276912/93‑1 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   >  1:6430250/1‑93 (MQ=255)
                 aaTCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCa                                                                   <  2:428140/93‑1 (MQ=255)
                     atcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAcc                                                               >  2:9061298/1‑93 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              <  1:6676241/93‑1 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              >  1:465284/1‑93 (MQ=255)
                      tcaAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCt                                                              >  2:4148272/1‑93 (MQ=255)
                       caAGGCGGCATTCAATGCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTa                                                             <  2:359757/93‑1 (MQ=255)
                        aaGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaa                                                            >  2:7740070/1‑93 (MQ=255)
                         aGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTaaa                                                           <  1:4125420/93‑1 (MQ=255)
                          ggcggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAc                                                          <  1:9953833/93‑1 (MQ=255)
                          ggcggcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAc                                                          <  2:3832990/93‑1 (MQ=255)
                              gcATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGttt                                                      <  2:4544908/93‑1 (MQ=255)
                               cATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtttt                                                     >  2:6736255/1‑93 (MQ=255)
                               cATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGtttt                                                     <  1:1341559/93‑1 (MQ=255)
                                aTTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTa                                                    <  2:9399856/93‑1 (MQ=255)
                                aTTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTa                                                    >  1:1932512/1‑93 (MQ=255)
                                 ttCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAg                                                   <  2:3185088/93‑1 (MQ=255)
                                    aaTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTcc                                                <  2:7153421/93‑1 (MQ=255)
                                    aaTACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTcc                                                >  2:6078089/1‑93 (MQ=255)
                                      tACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCgg                                              >  2:5837594/1‑93 (MQ=255)
                                        cccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                                            >  1:6117121/1‑93 (MQ=255)
                                        cccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCt                                            >  1:2789643/1‑93 (MQ=255)
                                         ccACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTa                                           >  2:299119/1‑93 (MQ=255)
                                          cACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAc                                          >  1:800952/1‑93 (MQ=255)
                                          cACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAc                                          >  1:1059940/1‑93 (MQ=255)
                                           cccGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACg                                         <  1:3885847/92‑1 (MQ=255)
                                           aCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACg                                         >  2:2725654/1‑93 (MQ=255)
                                             cGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACggt                                       <  2:7826503/93‑2 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     >  1:7669117/1‑93 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     >  2:3395726/1‑93 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     >  1:1272421/1‑93 (MQ=255)
                                               cACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCaa                                     <  1:6527512/93‑1 (MQ=255)
                                                aCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAg                                    >  1:1560444/1‑93 (MQ=255)
                                                 ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                                   <  2:1972262/93‑1 (MQ=255)
                                                 ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                                   >  2:1384656/1‑93 (MQ=255)
                                                 ccTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGa                                   >  1:3509585/1‑93 (MQ=255)
                                                   ttGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAat                                 >  2:2878487/1‑93 (MQ=255)
                                                     gTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatga                               <  1:8078981/93‑1 (MQ=255)
                                                     gTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACATAACCGTTTTAGTCCGGCTACGGCAAGAatga                               <  1:9491380/93‑1 (MQ=255)
                                                      tCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgat                              >  2:9796018/1‑93 (MQ=255)
                                                       ccTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAatgatg                             <  1:704944/93‑1 (MQ=255)
                                                        cTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATgg                            <  1:8939917/93‑1 (MQ=255)
                                                         tgccgccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           <  1:1204186/91‑1 (MQ=255)
                                                         tACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  1:5346016/1‑93 (MQ=255)
                                                         tACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:9497664/1‑93 (MQ=255)
                                                         tACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGc                           >  2:5420497/1‑93 (MQ=255)
                                                          aCCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCa                          <  1:3099895/93‑1 (MQ=255)
                                                           ccgccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAt                         <  1:9265914/93‑1 (MQ=255)
                                                           ccgccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAt                         <  1:741029/93‑1 (MQ=255)
                                                             gccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAACCGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCg                       >  1:8699783/1‑93 (MQ=255)
                                                             gccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCg                       <  2:1194082/93‑1 (MQ=255)
                                                              ccgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGt                      >  1:8451516/1‑93 (MQ=255)
                                                               cgGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTa                     <  1:5780197/93‑1 (MQ=255)
                                                                ggAAGAGAGATCTCGTGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    >  2:9921957/1‑93 (MQ=255)
                                                                ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAt                    <  2:16309/93‑1 (MQ=255)
                                                                ggAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGAATCGTAt                    >  2:869620/1‑93 (MQ=255)
                                                                 gaagaaAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAAAATGATGGCATCGTAtt                   <  2:225844/93‑1 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   <  2:2670100/93‑1 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   >  1:9625078/1‑93 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   >  1:3953523/1‑93 (MQ=255)
                                                                 gAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAtt                   <  1:5659616/93‑1 (MQ=255)
                                                                  aaGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTc                  <  1:2634181/93‑1 (MQ=255)
                                                                   agagagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCg                 >  2:7591972/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCTGCTACGGCAAGAATGATGGCAGCGTATTCGc                >  2:9207560/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTctc                <  2:9706705/93‑3 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  1:243562/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  2:8215879/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  2:1614903/1‑93 (MQ=255)
                                                                    gagagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGc                >  2:2058497/1‑93 (MQ=255)
                                                                     agagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGcc               <  1:1886795/93‑1 (MQ=255)
                                                                      gagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              <  2:7004687/90‑1 (MQ=255)
                                                                      gagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              <  2:7918444/90‑1 (MQ=255)
                                                                      cagaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCg              >  1:4315718/4‑93 (MQ=255)
                                                                       agaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGt             >  2:2116957/3‑93 (MQ=255)
                                                                       agaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGt             >  1:249619/3‑93 (MQ=255)
                                                                        gaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTGCGGCAAGAATGATGGCATCGTATTCGCCGtt            >  1:2347754/2‑93 (MQ=255)
                                                                        gaTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGtt            >  2:4710718/2‑93 (MQ=255)
                                                                         aTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           >  1:2216820/1‑93 (MQ=255)
                                                                         aTCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTa           <  1:7622609/93‑1 (MQ=255)
                                                                             cGGGTGGCATCGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCa       >  2:6222714/1‑93 (MQ=255)
                                                                                gTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGtt    >  2:8845361/1‑93 (MQ=255)
                                                                                 tGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGttt   <  2:2228277/93‑1 (MQ=255)
                                                                                 tGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGttt   >  1:4840402/1‑93 (MQ=255)
                                                                                 tGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGttt   <  2:5617207/93‑1 (MQ=255)
                                                                                 tGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGttt   <  2:9486160/93‑1 (MQ=255)
                                                                                  ggCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTg  <  1:8343452/93‑1 (MQ=255)
                                                                                       ||                                                                                      
CAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG  >  NC_000913/3987735‑3987909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  >  NC_000913/3987729‑3987911
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GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                           >  SRR4302540.8417422/1‑94 (MQ=60)
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAAC                                                                                           <  SRR4302540.5866965/94‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGC                                                                                      >  SRR4302540.1952062/1‑94 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGC                                                                                      <  SRR4302540.3456199/94‑1 (MQ=60)
     GCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGC                                                                                      >  SRR4302540.565141/1‑94 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                                    >  SRR4302540.4094122/1‑94 (MQ=60)
       AGCTCGCGAGTGCGTGAATCATCAAAGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGC                                                                                    >  SRR4302540.2645764/1‑94 (MQ=60)
         CTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGA                                                                                  <  SRR4302540.5117994/94‑1 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAAT                                                                                <  SRR4302540.3987877/94‑1 (MQ=60)
           CGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAAT                                                                                <  SRR4302540.2182024/94‑1 (MQ=60)
            GCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATA                                                                               <  SRR4302540.129189/94‑1 (MQ=60)
             gcagcgcgaGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATAC                                                                              <  SRR4302540.8482973/85‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGTCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             <  SRR4302540.2128347/94‑1 (MQ=60)
              GAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACG                                                                             <  SRR4302540.9224030/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            >  SRR4302540.9950861/1‑94 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            <  SRR4302540.5323834/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            <  SRR4302540.6679175/94‑1 (MQ=60)
               AGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGT                                                                            <  SRR4302540.1310582/94‑1 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           >  SRR4302540.9818778/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           >  SRR4302540.4760920/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           >  SRR4302540.605945/1‑94 (MQ=60)
                GTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTG                                                                           >  SRR4302540.818831/1‑94 (MQ=60)
                 TGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGA                                                                          <  SRR4302540.10114418/94‑1 (MQ=60)
                 TGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGA                                                                          >  SRR4302540.2440179/1‑94 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         <  SRR4302540.8982264/94‑1 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         >  SRR4302540.245907/1‑94 (MQ=60)
                  GCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAC                                                                         <  SRR4302540.198537/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATGCCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        <  SRR4302540.1935550/94‑1 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCCACGCGGCGCGAATACGTGACT                                                                        >  SRR4302540.2990978/1‑94 (MQ=60)
                   CGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACT                                                                        >  SRR4302540.2990977/1‑94 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                      >  SRR4302540.1000406/1‑94 (MQ=60)
                     TGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCC                                                                      >  SRR4302540.6845462/1‑94 (MQ=60)
                      GAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCA                                                                     >  SRR4302540.6501824/1‑94 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    <  SRR4302540.9549890/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    <  SRR4302540.2259085/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    <  SRR4302540.2529098/94‑1 (MQ=60)
                       AATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCAGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAG                                                                    <  SRR4302540.1410321/94‑1 (MQ=60)
                        ATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGA                                                                   >  SRR4302540.5203270/1‑94 (MQ=60)
                         TCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGAC                                                                  >  SRR4302540.8632238/1‑94 (MQ=60)
                           ATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCT                                                                >  SRR4302540.470251/1‑94 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGTGACGCGGNGNGAATACGTGACTCCAGACCGA                                                               >  SRR4302540.4966720/1‑94 (MQ=60)
                            TCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTA                                                               <  SRR4302540.6749992/94‑1 (MQ=60)
                             CAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAA                                                              <  SRR4302540.414258/94‑1 (MQ=60)
                             CAAGGCGGCATTCAATACCCAACGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTACAGACCTAA                                                              >  SRR4302540.4857494/1‑94 (MQ=60)
                              AAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAA                                                             >  SRR4302540.2300773/1‑94 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                            <  SRR4302540.4169984/94‑1 (MQ=60)
                               AGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAAC                                                            <  SRR4302540.7893077/94‑1 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                           >  SRR4302540.3019459/1‑94 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                           <  SRR4302540.10070023/94‑1 (MQ=60)
                                GGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACG                                                           <  SRR4302540.10070022/94‑1 (MQ=60)
                                 GCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGT                                                          <  SRR4302540.3680952/94‑1 (MQ=60)
                                  CGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTT                                                         <  SRR4302540.5065605/94‑1 (MQ=60)
                                    GCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTT                                                       <  SRR4302540.7297627/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                      <  SRR4302540.1355613/94‑1 (MQ=60)
                                     CATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTA                                                      >  SRR4302540.1953574/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302540.8405043/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     >  SRR4302540.6698840/1‑94 (MQ=60)
                                      ATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAG                                                     <  SRR4302540.1546569/94‑1 (MQ=60)
                                       TTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGT                                                    <  SRR4302540.1865121/94‑1 (MQ=60)
                                        TCAACACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTC                                                   <  SRR4302540.5988058/94‑1 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTCAACGTTTTAGTCC                                                  >  SRR4302540.268501/1‑94 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                  >  SRR4302540.9751980/1‑94 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                  >  SRR4302540.268499/1‑94 (MQ=60)
                                         CAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCC                                                  <  SRR4302540.421703/94‑1 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                 <  SRR4302540.6584899/94‑1 (MQ=60)
                                          AATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCG                                                 >  SRR4302540.5414390/1‑94 (MQ=60)
                                           ATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGAATCCAGACCTAAACGTTTTAGTCCGC                                                >  SRR4302540.7297592/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              >  SRR4302540.6185242/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              >  SRR4302540.2819765/1‑94 (MQ=60)
                                             ACCCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCT                                              <  SRR4302540.1282755/94‑1 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302540.1070729/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302540.9673151/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302540.809460/1‑94 (MQ=60)
                                               CCACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTAC                                            >  SRR4302540.1070730/1‑94 (MQ=60)
                                                CACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACG                                           >  SRR4302540.1113376/1‑94 (MQ=60)
                                                 CCCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                          <  SRR4302540.3928056/94‑1 (MQ=60)
                                                 ACCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGG                                          >  SRR4302540.3686915/1‑94 (MQ=60)
                                                  CCGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGC                                         >  SRR4302540.9569617/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        >  SRR4302540.6941484/1‑94 (MQ=60)
                                                   CGCACCTTGTCCTACCGCCGGAAGAGAGATATCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCA                                        <  SRR4302540.2464746/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       <  SRR4302540.592297/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       <  SRR4302540.2907358/94‑1 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       >  SRR4302540.7755560/1‑94 (MQ=60)
                                                    GCACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAA                                       >  SRR4302540.1285524/1‑94 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                      >  SRR4302540.1577580/1‑94 (MQ=60)
                                                     CACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAG                                      <  SRR4302540.6600002/94‑1 (MQ=60)
                                                      CCCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     <  SRR4302540.3880234/94‑1 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302540.2095852/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302540.6782751/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302540.6590053/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302540.8553887/1‑94 (MQ=60)
                                                      ACCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGA                                     >  SRR4302540.3547810/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                    >  SRR4302540.1715873/1‑94 (MQ=60)
                                                       CCTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAA                                    >  SRR4302540.2155315/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   >  SRR4302540.225546/1‑94 (MQ=60)
                                                        CTTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAAT                                   <  SRR4302540.7727345/94‑1 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                  >  SRR4302540.9308008/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                  >  SRR4302540.6798805/1‑94 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                  <  SRR4302540.2480740/94‑1 (MQ=60)
                                                         TTGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATG                                  <  SRR4302540.398198/94‑1 (MQ=60)
                                                          TGTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGA                                 >  SRR4302540.5932574/1‑94 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGCT                                >  SRR4302540.8117934/1‑94 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302540.7721128/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302540.626007/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302540.8172751/94‑1 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGAT                                >  SRR4302540.8476289/1‑94 (MQ=60)
                                                           GTCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACATAACCGTTTTAGTCCGGCTACGGCAAGAATGAT                                <  SRR4302540.9603888/94‑1 (MQ=60)
                                                            TCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATG                               <  SRR4302540.6354777/94‑1 (MQ=60)
                                                            TCCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATG                               >  SRR4302540.310143/1‑94 (MQ=60)
                                                             CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                              >  SRR4302540.6132162/1‑94 (MQ=60)
                                                             CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                              >  SRR4302540.9249961/1‑94 (MQ=60)
                                                             CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                              <  SRR4302540.712512/94‑1 (MQ=60)
                                                             CCTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGG                              <  SRR4302540.712511/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                             >  SRR4302540.9864075/1‑94 (MQ=60)
                                                              CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                             <  SRR4302540.9224588/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                             <  SRR4302540.9044779/94‑1 (MQ=60)
                                                              CTACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGC                             >  SRR4302540.5404666/1‑94 (MQ=60)
                                                               TGCCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                            <  SRR4302540.1216555/94‑1 (MQ=60)
                                                               TACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                            <  SRR4302540.8132397/94‑1 (MQ=60)
                                                               TACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCA                            >  SRR4302540.1236806/1‑94 (MQ=60)
                                                                ACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                           <  SRR4302540.3133854/94‑1 (MQ=60)
                                                                ACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                           <  SRR4302540.6550870/94‑1 (MQ=60)
                                                                ACCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCAT                           <  SRR4302540.7509851/94‑1 (MQ=60)
                                                                 CCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC                          <  SRR4302540.748941/94‑1 (MQ=60)
                                                                 CCGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATC                          <  SRR4302540.9376743/94‑1 (MQ=60)
                                                                  CGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAACCGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                         >  SRR4302540.8800771/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                         >  SRR4302540.8800772/1‑94 (MQ=60)
                                                                  CGCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCG                         >  SRR4302540.5752035/1‑94 (MQ=60)
                                                                   GCCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGT                        >  SRR4302540.8549636/1‑94 (MQ=60)
                                                                    CCGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTA                       >  SRR4302540.9654300/1‑94 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      <  SRR4302540.1971408/94‑1 (MQ=60)
                                                                     CGGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTAT                      <  SRR4302540.5844049/94‑1 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACTTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATC                     >  SRR4302540.8502316/1‑94 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     >  SRR4302540.9738513/1‑94 (MQ=60)
                                                                      GGAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATT                     >  SRR4302540.3996191/1‑94 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTG                    >  SRR4302540.2603767/1‑94 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302540.239872/94‑1 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302540.5575996/94‑1 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302540.5721935/94‑1 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302540.4397559/94‑1 (MQ=60)
                                                                       GAAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTC                    <  SRR4302540.6230800/94‑1 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   <  SRR4302540.2662702/94‑1 (MQ=60)
                                                                        AAGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCG                   <  SRR4302540.7663374/94‑1 (MQ=60)
                                                                         AGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                  >  SRR4302540.1578372/1‑94 (MQ=60)
                                                                         AGAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGC                  >  SRR4302540.245912/1‑94 (MQ=60)
                                                                          GAGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCC                 >  SRR4302540.2955022/1‑94 (MQ=60)
                                                                           acagATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                >  SRR4302540.4362709/5‑94 (MQ=60)
                                                                           AGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                <  SRR4302540.1907452/94‑1 (MQ=60)
                                                                           AGAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCG                <  SRR4302540.4113219/94‑1 (MQ=60)
                                                                            GAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGT               <  SRR4302540.9200865/94‑1 (MQ=60)
                                                                            GAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGT               >  SRR4302540.252036/1‑94 (MQ=60)
                                                                            GAGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATAGTATTCGCCGT               >  SRR4302540.5262251/1‑94 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTGCGGCAAGAATGATGGCATCGTATTCGCCGTT              >  SRR4302540.2373041/1‑94 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT              >  SRR4302540.6827276/1‑94 (MQ=60)
                                                                             AGATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTT              >  SRR4302540.5843534/1‑94 (MQ=60)
                                                                              GATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTA             >  SRR4302540.2240738/1‑94 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT            <  SRR4302540.9431923/94‑1 (MQ=60)
                                                                               ATCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTAT            <  SRR4302540.7708332/94‑1 (MQ=60)
                                                                                TCTCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATC           >  SRR4302540.2987738/1‑94 (MQ=60)
                                                                                TCTCGGGTAGCAACGCGGCGCGAATGCGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCCCCGTTATC           <  SRR4302540.8476575/94‑1 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGCCTCCAGACCTAAACGTTTTAGTCCGTCTACGGCAAGAATGATGGCATCGTATTCCCCGTTATCCA         <  SRR4302540.77879/94‑1 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA         <  SRR4302540.1250867/94‑1 (MQ=60)
                                                                                  TCGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCA         <  SRR4302540.4682005/94‑1 (MQ=60)
                                                                                  TAGGGTGGCAACGCGGCGCGAATTCGGCACTCCAGACCTAAACGTTTGAGTCCCGGTACGGCAAGAATGATGGCATCGTATTCACCGTTATCCA         <  SRR4302540.7876056/94‑1 (MQ=48)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302540.6133392/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302540.693196/94‑1 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        >  SRR4302540.3329959/1‑94 (MQ=60)
                                                                                   CGGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAG        <  SRR4302540.4265082/94‑1 (MQ=60)
                                                                                    GGGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGT       >  SRR4302540.8864611/1‑94 (MQ=60)
                                                                                     GGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTT      >  SRR4302540.4823000/1‑94 (MQ=60)
                                                                                     GGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTT      >  SRR4302540.3454239/1‑94 (MQ=60)
                                                                                     GGTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTT      >  SRR4302540.4307118/1‑94 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGTCTCCGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT     >  SRR4302540.1447800/1‑94 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT     >  SRR4302540.1447801/1‑94 (MQ=60)
                                                                                      GTGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTT     >  SRR4302540.4892251/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG    >  SRR4302540.5867338/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG    >  SRR4302540.228126/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG    >  SRR4302540.8074258/1‑94 (MQ=60)
                                                                                       TGGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTG    <  SRR4302540.822776/94‑1 (MQ=60)
                                                                                        GGCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGC   <  SRR4302540.8440294/94‑1 (MQ=60)
                                                                                         GCAACGCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  <  SRR4302540.3990135/94‑1 (MQ=60)
                                                                                             |                                                                                         
GGCAAGCAGCTCGCGAGTGCGTGAATCATCAAGGCGGCATTCAATACCCACCGCACCTTGTCCTACCGCCGGAAGAGAAATCTCGGGTGGCAAGCCGGCGCGAATACGTGACTCCAGACCTAAACGTTTTAGTCCGGCTACGGCAAGAATGATGGCATCGTATTCGCCGTTATCCAGTTTGCT  >  NC_000913/3987729‑3987911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑