Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,007,718	2 bp→CG	coding (943‑944/1023 nt)	pldB →	lysophospholipase L(2)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,007,718	0	G	C	99.8%	1387.8 / ‑5.5	428	A315R (GCC→CGC)	pldB	lysophospholipase L(2)
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (238/189); minor base T (0/1); total (238/190)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01
*	NC_000913	4,007,719	0	C	G	100.0%	1401.6 / NA	428	A315R (GCC→CGC)	pldB	lysophospholipase L(2)
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (238/190); total (238/190)

Only 100 of 437 total aligned reads displayed.

ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT  >  NC_000913/4007631‑4007805

||

cccgccgCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCa                                                                                     <  1:4403961/92‑1 (MQ=255)

 ccgccgCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAg                                                                                    <  2:6630568/93‑1 (MQ=255)

 ccgccgCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAg                                                                                    <  2:135300/93‑1 (MQ=255)

 ccgccgCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAg                                                                                    >  1:4927231/1‑93 (MQ=255)

  cgccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGt                                                                                   >  1:8780579/1‑93 (MQ=255)

   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                  >  1:1671346/1‑93 (MQ=255)

   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                  <  1:1778251/93‑1 (MQ=255)

   gccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTc                                                                                  <  1:7511241/93‑1 (MQ=255)

    ccgcGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTcg                                                                                 >  2:1119682/1‑93 (MQ=255)

     cgcgGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTcgc                                                                                <  1:104107/93‑1 (MQ=255)

     cgcgGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTcgc                                                                                <  1:2778986/93‑1 (MQ=255)

      gcgGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTcgcg                                                                               >  2:5933400/1‑93 (MQ=255)

        gggCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCt                                                                             <  2:2186405/93‑1 (MQ=255)

           ccATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCa                                                                          <  2:7254248/93‑1 (MQ=255)

            cATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAc                                                                         >  2:498606/1‑93 (MQ=255)

            cATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAc                                                                         >  2:8010458/1‑93 (MQ=255)

              tCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGc                                                                       >  2:9012592/1‑93 (MQ=255)

              tCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGc                                                                       >  2:7380227/1‑93 (MQ=255)

                cTGTCGAAGGTGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCa                                                                     >  2:5216518/1‑93 (MQ=255)

                cTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCa                                                                     >  1:8324074/1‑93 (MQ=255)

                 tGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACTCAATGCGCTCAGGCGCGCTCCACGCCAt                                                                    >  1:8943586/1‑93 (MQ=255)

                 tGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCAt                                                                    <  1:9761955/93‑1 (MQ=255)

                  gTCGAAGGAGGACGGCCGTTGGGTATTAAAGGTGCTTATCATGAGATCCTTTTTGAAAAGGACGCAATTCGCTCAGTCGCGCTCCACGCCAtt                                                                   >  2:8927177/1‑92 (MQ=255)

                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                                <  1:4269639/93‑1 (MQ=255)

                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                                >  1:95283/1‑93 (MQ=255)

                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                                >  2:7541420/1‑93 (MQ=255)

                     gAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGtt                                                                >  2:5511322/1‑93 (MQ=255)

                      aaGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTg                                                               >  2:9554628/1‑93 (MQ=255)

                      aaGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTg                                                               <  2:8555056/93‑1 (MQ=255)

                       aggaggACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGa                                                              <  1:5217518/93‑1 (MQ=255)

                           ggaCGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAtttt                                                          <  1:6497562/93‑1 (MQ=255)

                              cGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTc                                                       >  2:3642177/1‑93 (MQ=255)

                               ggCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCa                                                      >  2:5705164/1‑93 (MQ=255)

                                gCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGCAACGGACGCAATGCGCTCAGTCGAGCTCCACGCCATCGTTGATTCTCTCaa                                                     >  1:5596187/1‑93 (MQ=255)

                                gCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCaa                                                     >  1:5061279/1‑93 (MQ=255)

                                 ccGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAc                                                    >  2:3476176/1‑93 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   <  2:2254884/93‑1 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   >  2:2879814/1‑93 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   <  1:1147094/93‑1 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   >  2:1527918/1‑93 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   <  1:2462797/93‑1 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   <  2:6305522/93‑1 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   >  1:5825199/1‑93 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   <  2:8130640/93‑1 (MQ=255)

                                  cGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACa                                                   >  1:3912727/1‑93 (MQ=255)

                                   gTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAcgg                                                  <  1:1826889/93‑3 (MQ=255)

                                    ttGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTAGCGCTCCACGCCATCGTTGATTTTTTCAACAgg                                                 >  2:2586481/1‑93 (MQ=255)

                                     tGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGc                                                >  2:8822367/1‑93 (MQ=255)

                                      ggTAATTAAATGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCa                                               <  2:4591100/93‑1 (MQ=255)

                                      ggTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCa                                               <  1:2863168/93‑1 (MQ=255)

                                       gTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAt                                              >  2:4001968/1‑93 (MQ=255)

                                        tAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATa                                             >  1:6065165/1‑93 (MQ=255)

                                        tAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATa                                             >  2:835544/1‑93 (MQ=255)

                                         aaTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATaa                                            >  2:9897279/1‑93 (MQ=255)

                                         aaTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATaa                                            <  1:5958194/93‑1 (MQ=255)

                                         aaTTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATaa                                            <  1:5582003/93‑1 (MQ=255)

                                            tAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑Tc                                        >  2:713986/1‑93 (MQ=255)

                                              aaGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAc                                      <  1:2018056/93‑1 (MQ=255)

                                              aaGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAc                                      >  2:4726924/1‑93 (MQ=255)

                                              aaGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAc                                      >  1:9954184/1‑93 (MQ=255)

                                              aaGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAc                                      >  1:9413079/1‑93 (MQ=255)

                                               aGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAcc                                     >  1:9123505/1‑93 (MQ=255)

                                               aGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAcc                                     >  1:3553749/1‑93 (MQ=255)

                                                 gTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCa                                   <  2:185656/93‑1 (MQ=255)

                                                 gTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCa                                   >  1:1858041/1‑93 (MQ=255)

                                                  tGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAg                                  <  1:479153/93‑1 (MQ=255)

                                                    tttACCATGAGAGCCTTTTTGAAAAGGACGCAATGCGCTCAGACGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCg                                <  2:619754/92‑1 (MQ=255)

                                                    cTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCg                                <  1:265425/93‑1 (MQ=255)

                                                      gaCCATGAGATCCTTGTTGAAAAGGACTCAATGCGCTCAGGCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGa                              <  1:6531254/92‑1 (MQ=255)

                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAAc                           <  2:3830297/93‑1 (MQ=255)

                                                         cATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAAc                           <  1:3308687/93‑1 (MQ=255)

                                                          aTGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAAcc                          >  1:7088674/1‑93 (MQ=255)

                                                           tGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAActg                         >  2:8672914/1‑91 (MQ=255)

                                                           tGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCg                         >  2:9766623/1‑93 (MQ=255)

                                                           tGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCg                         >  1:1578606/1‑93 (MQ=255)

                                                            gagaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGc                        >  2:9686043/1‑93 (MQ=255)

                                                            gagaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGc                        >  2:6138672/1‑93 (MQ=255)

                                                              gaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTTAAACGGCATAACTTAACCCAGCGAAAACCGct                       >  1:3410862/1‑93 (MQ=255)

                                                              gaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGctc                      >  2:9214124/1‑93 (MQ=255)

                                                              gaTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGctc                      >  2:4867480/1‑93 (MQ=255)

                                                               aTCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGctct                     >  2:2488762/1‑93 (MQ=255)

                                                                tCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCCCCCAGCGGAAACCGCTCTa                    <  1:6931850/93‑1 (MQ=255)

                                                                tCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTa                    >  2:6900278/1‑93 (MQ=255)

                                                                 ccTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTAc                   >  1:7900396/1‑93 (MQ=255)

                                                                  cTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCGATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACa                  >  2:2996237/1‑93 (MQ=255)

                                                                  cTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACa                  <  2:1259145/93‑1 (MQ=255)

                                                                  cTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACa                  >  2:4415005/1‑93 (MQ=255)

                                                                    ttttGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACaga                <  2:4111288/93‑1 (MQ=255)

                                                                     tttGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACagag               >  1:3149000/1‑93 (MQ=255)

                                                                       tGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGt             <  2:3107686/93‑1 (MQ=255)

                                                                        gAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGtt            <  1:10024613/93‑1 (MQ=255)

                                                                        gAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGtt            <  2:7845546/93‑1 (MQ=255)

                                                                         aaaaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGttt           <  2:6772654/93‑1 (MQ=255)

                                                                          aaaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTa          >  1:1636127/1‑93 (MQ=255)

                                                                           aaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTaa         <  1:9297952/93‑1 (MQ=255)

                                                                           aaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTaa         <  1:6692757/93‑1 (MQ=255)

                                                                           aaGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTaa         >  1:6263773/1‑93 (MQ=255)

                                                                             ggACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAt       >  2:3554969/1‑93 (MQ=255)

                                                                                cGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTc    >  1:8482881/1‑93 (MQ=255)

                                                                                 gCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCt   <  2:9436004/93‑1 (MQ=255)

||

ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT  >  NC_000913/4007631‑4007805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 225 total aligned reads displayed.

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  NC_000913/4007625‑4007807

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAATGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                            >  SRR4302540.7037214/1‑94 (MQ=60)

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                            >  SRR4302540.818701/1‑94 (MQ=60)

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGC                                                                                            <  SRR4302540.8065501/94‑1 (MQ=60)

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGCACGCAATGC                                                                                            >  SRR4302540.4386822/1‑94 (MQ=60)

     CGCCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCA                                                                                       <  SRR4302540.1668902/94‑1 (MQ=60)

      CCCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAATGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                      <  SRR4302540.128763/94‑1 (MQ=60)

      CCCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                      <  SRR4302540.4451712/94‑1 (MQ=60)

      CCCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                      <  SRR4302540.7037657/94‑1 (MQ=60)

      ACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAG                                                                                      >  SRR4302540.4980341/1‑94 (MQ=60)

       CCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGT                                                                                     >  SRR4302540.8882243/1‑94 (MQ=60)

        CGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTC                                                                                    <  SRR4302540.7956440/94‑1 (MQ=60)

        CGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTC                                                                                    >  SRR4302540.2751328/1‑94 (MQ=60)

        CGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTC                                                                                    >  SRR4302540.1689523/1‑94 (MQ=60)

         GCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCG                                                                                   <  SRR4302540.7595202/94‑1 (MQ=60)

         GCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCG                                                                                   <  SRR4302540.1797558/94‑1 (MQ=60)

         CCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCG                                                                                   <  SRR4302540.2131388/94‑1 (MQ=60)

          CCGCGGGCAATCATGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGC                                                                                  <  SRR4302540.1717099/94‑1 (MQ=60)

           CGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCG                                                                                 <  SRR4302540.105215/94‑1 (MQ=60)

           CGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCG                                                                                 <  SRR4302540.2809014/94‑1 (MQ=60)

              GGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTC                                                                              >  SRR4302540.6609772/1‑94 (MQ=60)

              GGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTC                                                                              <  SRR4302540.9718129/94‑1 (MQ=60)

              GGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTC                                                                              >  SRR4302540.31663/1‑94 (MQ=60)

               GGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCC                                                                             <  SRR4302540.1073692/94‑1 (MQ=60)

               GGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCC                                                                             >  SRR4302540.6147614/1‑94 (MQ=60)

                GCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCA                                                                            >  SRR4302540.3757849/1‑94 (MQ=60)

                 CCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAC                                                                           >  SRR4302540.7014673/1‑94 (MQ=60)

                 CCATCCTGTCGAAGGAGGACGGCCGATGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCAC                                                                           <  SRR4302540.9826198/94‑1 (MQ=60)

                  CATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACG                                                                          >  SRR4302540.8439434/1‑94 (MQ=60)

                   ATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGC                                                                         >  SRR4302540.6585351/1‑94 (MQ=60)

                   ATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGC                                                                         >  SRR4302540.7511992/1‑94 (MQ=60)

                   ATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGC                                                                         >  SRR4302540.1487621/1‑94 (MQ=60)

                     CCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCA                                                                       >  SRR4302540.8420686/1‑94 (MQ=60)

                      CTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACTCAATGCGCTCAGGCGCGCTCCACGCCAT                                                                      >  SRR4302540.9048680/1‑94 (MQ=60)

                      CTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCAT                                                                      >  SRR4302540.9497881/1‑94 (MQ=60)

                       TGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATC                                                                     <  SRR4302540.9876453/94‑1 (MQ=60)

                       TGGCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATC                                                                     <  SRR4302540.164027/94‑1 (MQ=60)

                         TCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGT                                                                   >  SRR4302540.6503872/1‑94 (MQ=60)

                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                  >  SRR4302540.9773174/1‑94 (MQ=60)

                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                  >  SRR4302540.7246260/1‑94 (MQ=60)

                          CGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTT                                                                  >  SRR4302540.96295/1‑94 (MQ=60)

                           GAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTG                                                                 <  SRR4302540.4316078/94‑1 (MQ=60)

                            AAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGA                                                                >  SRR4302540.8309807/1‑94 (MQ=60)

                            AAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCACGCTCCACGCCATCGTTGA                                                                >  SRR4302540.9896966/1‑94 (MQ=60)

                             AGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAT                                                               <  SRR4302540.5274396/94‑1 (MQ=60)

                             AGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGAT                                                               <  SRR4302540.6623161/94‑1 (MQ=60)

                                AGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTT                                                            >  SRR4302540.6591506/1‑94 (MQ=60)

                                AGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTT                                                            <  SRR4302540.6973127/94‑1 (MQ=60)

                                 GGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTT                                                           <  SRR4302540.6569808/94‑1 (MQ=60)

                                 GGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTGTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTT                                                           <  SRR4302540.2612345/94‑1 (MQ=60)

                                  GACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTT                                                          <  SRR4302540.2785847/94‑1 (MQ=60)

                                   ACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTC                                                         >  SRR4302540.5222712/1‑94 (MQ=60)

                                   ACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTC                                                         <  SRR4302540.1158987/94‑1 (MQ=60)

                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGCAACGGACGCAATGCGCTCAGTCGAGCTCCACGCCATCGTTGATTCTCTCAA                                                       >  SRR4302540.5657755/1‑94 (MQ=60)

                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                       >  SRR4302540.5115999/1‑94 (MQ=60)

                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                       >  SRR4302540.5657753/1‑94 (MQ=60)

                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                       <  SRR4302540.8952070/94‑1 (MQ=60)

                                     GGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAA                                                       >  SRR4302540.1660706/1‑94 (MQ=60)

                                      GCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAC                                                      >  SRR4302540.4966789/1‑94 (MQ=60)

                                      GCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAAC                                                      <  SRR4302540.6548490/94‑1 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.5889597/1‑94 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.3955115/1‑94 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.5889598/1‑94 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.6714586/1‑94 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.6072336/1‑94 (MQ=60)

                                       CCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACA                                                     >  SRR4302540.9187150/1‑94 (MQ=60)

                                        CGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAG                                                    <  SRR4302540.9072633/94‑1 (MQ=60)

                                        CGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAG                                                    <  SRR4302540.2489301/94‑1 (MQ=60)

                                        CGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAG                                                    >  SRR4302540.4253440/1‑94 (MQ=60)

                                        CGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAG                                                    <  SRR4302540.1159063/94‑1 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACGGG                                                   <  SRR4302540.1846869/94‑1 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                   >  SRR4302540.2406315/1‑94 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                   >  SRR4302540.1793308/1‑94 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                   <  SRR4302540.1846867/94‑1 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                   >  SRR4302540.8505615/1‑94 (MQ=60)

                                         GTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGG                                                   >  SRR4302540.1030514/1‑94 (MQ=60)

                                          GTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGC                                                  <  SRR4302540.3006992/94‑1 (MQ=60)

                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                 <  SRR4302540.3119236/94‑1 (MQ=60)

                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                 <  SRR4302540.1861660/94‑1 (MQ=60)

                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                 <  SRR4302540.1018014/94‑1 (MQ=60)

                                           TGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCA                                                 >  SRR4302540.1710522/1‑94 (MQ=60)

                                            GGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCAT                                                <  SRR4302540.2894217/94‑1 (MQ=60)

                                             GTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATA                                               >  SRR4302540.6132593/1‑94 (MQ=60)

                                             GTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATA                                               >  SRR4302540.1022997/1‑94 (MQ=60)

                                             GTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATA                                               >  SRR4302540.3985294/1‑94 (MQ=60)

                                              TAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAA                                              <  SRR4302540.1664352/94‑1 (MQ=60)

                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                             >  SRR4302540.5751870/1‑94 (MQ=60)

                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                             <  SRR4302540.6024093/94‑1 (MQ=60)

                                               AATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC                                             <  SRR4302540.5643448/94‑1 (MQ=60)

                                                ATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑T                                           <  SRR4302540.6727423/94‑1 (MQ=60)

                                                ATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑T                                           >  SRR4302540.5404568/1‑94 (MQ=60)

                                                ATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑T                                           >  SRR4302540.1900319/1‑94 (MQ=60)

                                                 TTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TC                                          <  SRR4302540.5789329/94‑1 (MQ=60)

                                                  TAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCA                                         <  SRR4302540.9635592/94‑1 (MQ=60)

                                                  TAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCA                                         <  SRR4302540.2840834/94‑1 (MQ=60)

                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAC                                        >  SRR4302540.9524996/1‑94 (MQ=60)

                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAC                                        <  SRR4302540.7098583/94‑1 (MQ=60)

                                                   AAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCAC                                        >  SRR4302540.10070376/1‑94 (MQ=60)

                                                    ATGGTGCTTACCATGAGATCCTTTTTGAAAAGGCCGCACTGCGCTCAGTCGCGCTCCACGCCATCGTTGCTTTTTTCAACAGGCATAAC‑TCCCC                                       <  SRR4302540.7770682/94‑1 (MQ=60)

                                                    AAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACC                                       >  SRR4302540.9233172/1‑94 (MQ=60)

                                                    AAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACC                                       >  SRR4302540.3592577/1‑94 (MQ=60)

                                                    AAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACC                                       <  SRR4302540.2039868/94‑1 (MQ=60)

                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCC                                      >  SRR4302540.5737799/1‑94 (MQ=60)

                                                     AGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCC                                      <  SRR4302540.5062319/94‑1 (MQ=60)

                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCA                                     >  SRR4302540.1878416/1‑94 (MQ=60)

                                                      GGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCA                                     >  SRR4302540.4329878/1‑94 (MQ=60)

                                                       GTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAG                                    >  SRR4302540.3607564/1‑94 (MQ=60)

                                                       GTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAG                                    <  SRR4302540.488862/94‑1 (MQ=60)

                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGC                                   >  SRR4302540.8591673/1‑94 (MQ=60)

                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGC                                   <  SRR4302540.484288/94‑1 (MQ=60)

                                                        TGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGC                                   <  SRR4302540.9202626/94‑1 (MQ=60)

                                                         GCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCG                                  <  SRR4302540.1703371/94‑1 (MQ=60)

                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGG                                 >  SRR4302540.6510725/1‑94 (MQ=60)

                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGG                                 <  SRR4302540.268031/94‑1 (MQ=60)

                                                          CTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGG                                 >  SRR4302540.406182/1‑94 (MQ=60)

                                                           TTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGA                                <  SRR4302540.4856873/94‑1 (MQ=60)

                                                           TTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TAACCCAGCGGA                                >  SRR4302540.3230427/1‑94 (MQ=60)

                                                            TACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAA                               >  SRR4302540.3427552/1‑94 (MQ=60)

                                                            TACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAA                               >  SRR4302540.180204/1‑94 (MQ=60)

                                                            TACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAA                               >  SRR4302540.5128143/1‑94 (MQ=60)

                                                            GACCATGAGATCCTTGTTGAAAAGGACTCAATGCGCTCAGGCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAA                               <  SRR4302540.6603761/94‑1 (MQ=60)

                                                             ACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAA                              >  SRR4302540.5649042/1‑94 (MQ=60)

                                                             ACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAA                              <  SRR4302540.8045467/94‑1 (MQ=60)

                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAAC                             >  SRR4302540.1989315/1‑94 (MQ=60)

                                                              CCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCAACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAAC                             >  SRR4302540.1900614/1‑94 (MQ=60)

                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACC                            >  SRR4302540.7167555/1‑94 (MQ=60)

                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACC                            <  SRR4302540.3102199/94‑1 (MQ=60)

                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACC                            <  SRR4302540.3344936/94‑1 (MQ=60)

                                                               CATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACC                            <  SRR4302540.3570332/94‑1 (MQ=60)

                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCG                           <  SRR4302540.1624062/94‑1 (MQ=60)

                                                                ATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCG                           >  SRR4302540.1595864/1‑94 (MQ=60)

                                                                  GAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCT                         <  SRR4302540.8806252/94‑1 (MQ=60)

                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTTAAACGGCATAACTTAACCCAGCGAAAACCGCT                         >  SRR4302540.3448010/1‑94 (MQ=57)

                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTC                        >  SRR4302540.793703/1‑94 (MQ=60)

                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTC                        <  SRR4302540.965828/94‑1 (MQ=60)

                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTC                        <  SRR4302540.858974/94‑1 (MQ=60)

                                                                   AGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTC                        >  SRR4302540.6092315/1‑94 (MQ=60)

                                                                    GTTCCTTTTTGAAAAGGACGCAATGCGCTCTGTCGCGCTCCACGCCTTCTTTGATTTTTTCTACAGGCAcatttcacctatcggaaactgcttt                        >  SRR4302540.9086128/1‑69 (MQ=37)

                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCT                       >  SRR4302540.5563724/1‑94 (MQ=60)

                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCT                       <  SRR4302540.4608637/94‑1 (MQ=60)

                                                                    GATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCT                       >  SRR4302540.2732211/1‑94 (MQ=60)

                                                                     ATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGactacttcagcacgcggacaccgctgta                       >  SRR4302540.2523688/1‑66 (MQ=60)

                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCCCCCAGCGGAAACCGCTCTAC                     <  SRR4302540.7008988/94‑1 (MQ=60)

                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTAC                     <  SRR4302540.6954102/94‑1 (MQ=60)

                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTAC                     >  SRR4302540.6065291/1‑94 (MQ=60)

                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTAC                     >  SRR4302540.7992544/1‑94 (MQ=60)

                                                                      TCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGGTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTAC                     >  SRR4302540.4776291/1‑94 (MQ=60)

                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACA                    <  SRR4302540.6216569/94‑1 (MQ=60)

                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACA                    <  SRR4302540.6216570/94‑1 (MQ=60)

                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACA                    >  SRR4302540.1262643/1‑94 (MQ=60)

                                                                       CCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACA                    <  SRR4302540.5956639/94‑1 (MQ=60)

                                                                        CTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAG                   >  SRR4302540.5046952/1‑94 (MQ=60)

                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGA                  >  SRR4302540.10031223/1‑94 (MQ=60)

                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGA                  >  SRR4302540.900481/1‑94 (MQ=60)

                                                                         TTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGA                  <  SRR4302540.3415761/94‑1 (MQ=60)

                                                                          TTTTGAAAAGGGCGCAATGCGCTCAGTCGCCCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 <  SRR4302540.3567419/94‑1 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 >  SRR4302540.3183297/1‑94 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 <  SRR4302540.9588182/94‑1 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 >  SRR4302540.2671636/1‑94 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 >  SRR4302540.5016530/1‑94 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 <  SRR4302540.4705195/94‑1 (MQ=60)

                                                                          TTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAG                 <  SRR4302540.3567420/94‑1 (MQ=60)

                                                                           TGTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGG                <  SRR4302540.9350221/94‑1 (MQ=60)

                                                                             TGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACATGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTT              >  SRR4302540.8982902/1‑94 (MQ=60)

                                                                              GAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTT             >  SRR4302540.7327079/1‑94 (MQ=60)

                                                                              GAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTT             <  SRR4302540.10141261/94‑1 (MQ=60)

                                                                              GAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTT             <  SRR4302540.1516391/94‑1 (MQ=60)

                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTA            <  SRR4302540.284382/94‑1 (MQ=60)

                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTA            >  SRR4302540.9401828/1‑94 (MQ=60)

                                                                               AAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTA            >  SRR4302540.1654021/1‑94 (MQ=60)

                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGCAACCGCTCTACAGAGGTTTAA           >  SRR4302540.1851757/1‑94 (MQ=60)

                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAA           >  SRR4302540.1851758/1‑94 (MQ=60)

                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAA           >  SRR4302540.9424239/1‑94 (MQ=60)

                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAA           >  SRR4302540.9424058/1‑94 (MQ=60)

                                                                                AAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAA           >  SRR4302540.6333458/1‑94 (MQ=60)

                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          <  SRR4302540.5998974/94‑1 (MQ=60)

                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          <  SRR4302540.6766647/94‑1 (MQ=60)

                                                                                 AAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAA          <  SRR4302540.9409030/94‑1 (MQ=60)

                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         >  SRR4302540.5411584/1‑94 (MQ=60)

                                                                                  AGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAAT         >  SRR4302540.5574751/1‑94 (MQ=60)

                                                                                   GGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATT        >  SRR4302540.83623/1‑94 (MQ=60)

                                                                                    GACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTT       <  SRR4302540.9504152/94‑1 (MQ=60)

                                                                                     ACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTC      >  SRR4302540.8581423/1‑94 (MQ=60)

                                                                                      CGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCT     >  SRR4302540.3477930/1‑94 (MQ=60)

                                                                                      CGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCT     <  SRR4302540.1633397/94‑1 (MQ=60)

                                                                                      CGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCT     >  SRR4302540.4194127/1‑94 (MQ=60)

                                                                                       GCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT    <  SRR4302540.3445552/94‑1 (MQ=60)

                                                                                       GCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT    <  SRR4302540.37931/94‑1 (MQ=60)

                                                                                       GCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT    >  SRR4302540.1724374/1‑94 (MQ=60)

                                                                                       GCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTT    <  SRR4302540.2458232/94‑1 (MQ=60)

                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACTGCTCTACAGAGGGTTAAATTTCTTA   >  SRR4302540.9123100/1‑94 (MQ=60)

                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   <  SRR4302540.4318356/94‑1 (MQ=60)

                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   >  SRR4302540.4355605/1‑94 (MQ=60)

                                                                                        CAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTA   <  SRR4302540.3229607/94‑1 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302540.3429502/1‑94 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302540.5707493/94‑1 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302540.6280909/1‑94 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302540.1330275/94‑1 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  <  SRR4302540.1330273/94‑1 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302540.5281597/1‑94 (MQ=60)

                                                                                         AATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  SRR4302540.3471383/1‑94 (MQ=60)

CTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGGCCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAAC‑TCACCCAGCGGAAACCGCTCTACAGAGGTTTAAATTTCTTAT  >  NC_000913/4007625‑4007807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`