Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,007,907 +GG intergenic (+109/‑11) pldB → / → b4555 lysophospholipase L(2)/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,007,9071.G93.6% 1327.9 / 78.8 436intergenic (+109/‑11)pldB/b4555lysophospholipase L(2)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (14/14);  new base G (222/185);  total (236/200)
Fisher's exact test for biased strand distribution p-value = 6.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01
*NC_0009134,007,9072.G93.6% 1315.5 / 78.8 436intergenic (+109/‑11)pldB/b4555lysophospholipase L(2)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (14/14);  new base G (221/186);  total (236/200)
Fisher's exact test for biased strand distribution p-value = 6.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01

Only 100 of 480 total aligned reads displayed.

GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT  >  NC_000913/4007815‑4007996
                                                                                             ||                                                                                         
gttgttGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgc                                                                                             >  2:2161075/1‑93 (MQ=255)
 ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCACAGAAACTCTGAAGCTGCTCACCgcgcgcg                                                                                            >  1:1429326/1‑92 (MQ=255)
    ttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgcggca                                                                                         <  2:8414015/93‑5 (MQ=255)
           tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACtt                                                                                  >  2:9241316/1‑93 (MQ=255)
           tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACtt                                                                                  >  1:1542139/1‑93 (MQ=255)
             aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtg                                                                                >  1:8912405/1‑93 (MQ=255)
              tttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtgt                                                                               <  2:891011/93‑1 (MQ=255)
               ttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtgtg                                                                              >  1:1765567/1‑93 (MQ=255)
               ttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtgtg                                                                              >  2:7446655/1‑93 (MQ=255)
                tacaTGGAACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTgtgt                                                                             <  2:5596186/90‑1 (MQ=255)
                tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTgtgt                                                                             >  1:1989942/1‑93 (MQ=255)
                 aGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGtt                                                                            <  1:296/93‑1 (MQ=255)
                   aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTg                                                                          <  1:5662891/93‑1 (MQ=255)
                   aTGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTg                                                                          <  2:8780578/93‑1 (MQ=255)
                     ggCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCg                                                                        >  1:7262782/1‑93 (MQ=255)
                     ggCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCg                                                                        >  2:9448150/1‑93 (MQ=255)
                         cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCg                                                                    >  1:2805753/1‑93 (MQ=255)
                         cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCg                                                                    >  1:1134833/1‑93 (MQ=255)
                          gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCACCTTTGGGTTTGCGACCgg                                                                   >  1:8385498/1‑93 (MQ=255)
                          gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCgg                                                                   >  1:8210874/1‑93 (MQ=255)
                          gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCgg                                                                   <  1:5816980/93‑1 (MQ=255)
                          gTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCgg                                                                   >  1:1287493/1‑93 (MQ=255)
                           ttACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgt                                                                  <  1:326131/93‑1 (MQ=255)
                            tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtc                                                                 >  2:10013774/1‑93 (MQ=255)
                            tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtc                                                                 <  2:4283285/93‑1 (MQ=255)
                             tcTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcg                                                                <  1:6034495/92‑1 (MQ=255)
                              cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgt                                                               >  2:6884459/1‑93 (MQ=255)
                               tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgtc                                                              <  2:1360091/93‑1 (MQ=255)
                               tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgtc                                                              >  2:1241548/1‑93 (MQ=255)
                                     ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg                                                        >  2:5200784/1‑93 (MQ=255)
                                     ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg                                                        >  1:7888808/1‑93 (MQ=255)
                                     ccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACg                                                        <  1:7431144/93‑1 (MQ=255)
                                       gACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt                                                      <  2:7246233/93‑1 (MQ=255)
                                       caCCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGtt                                                      <  1:7541917/92‑1 (MQ=255)
                                        aCCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTg                                                     >  1:8170825/1‑93 (MQ=255)
                                          cATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAt                                                   <  1:6338166/93‑1 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  >  1:4372397/1‑93 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  <  1:225363/93‑1 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  >  2:1970408/1‑93 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTCCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  >  2:1874023/1‑93 (MQ=255)
                                            tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt                                                 >  1:4037169/1‑93 (MQ=255)
                                            tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt                                                 >  1:242429/1‑93 (MQ=255)
                                            tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt                                                 >  1:4500463/1‑93 (MQ=255)
                                             aCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgtg                                                <  2:3434050/93‑1 (MQ=255)
                                               gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg                                              >  1:6657743/1‑93 (MQ=255)
                                               gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg                                              >  2:7719247/1‑93 (MQ=255)
                                                ttATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTgggg                                             >  1:4925395/1‑93 (MQ=255)
                                                 tATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGc                                            >  2:28987/1‑93 (MQ=255)
                                                    ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa                                         <  2:8214330/93‑1 (MQ=255)
                                                     cccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAt                                        <  2:6512998/93‑1 (MQ=255)
                                                     cccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAt                                        >  2:9658915/1‑93 (MQ=255)
                                                      ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt                                       >  2:9814676/1‑93 (MQ=255)
                                                      ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt                                       >  2:1553828/1‑93 (MQ=255)
                                                      ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt                                       >  2:9394004/1‑93 (MQ=255)
                                                       cTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc                                      >  2:3091966/1‑93 (MQ=255)
                                                       cTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc                                      >  2:8063045/1‑93 (MQ=255)
                                                       cTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc                                      >  1:5299358/1‑93 (MQ=255)
                                                       cTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGATGATGTGGGGCAAATTc                                      >  1:8804282/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCACATTcg                                     >  1:9924382/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg                                     >  2:335410/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg                                     >  2:241804/1‑93 (MQ=255)
                                                         tACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcgc                                    >  2:3738106/1‑93 (MQ=255)
                                                           cGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGa                                  >  1:4734812/1‑93 (MQ=255)
                                                             ccAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATa                                >  2:5862122/1‑93 (MQ=255)
                                                              cAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa                               >  2:7010098/1‑93 (MQ=255)
                                                              cAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATaa                               <  2:31336/93‑1 (MQ=255)
                                                               aaaGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt                              >  2:1689783/1‑93 (MQ=255)
                                                                aaGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCACATTCGCGATAATc                             >  1:9291507/1‑93 (MQ=255)
                                                                aaGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATc                             >  1:9545837/1‑93 (MQ=255)
                                                                  gAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg                           <  1:713986/93‑1 (MQ=255)
                                                                    acctcaGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga                         <  2:2721982/91‑1 (MQ=255)
                                                                    aaCTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga                         <  1:9754982/93‑1 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    <  2:9753178/93‑1 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    >  1:5024975/1‑93 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    <  1:8655160/93‑1 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGAGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    <  1:9686044/93‑1 (MQ=255)
                                                                          gAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa                   <  1:5158945/93‑1 (MQ=255)
                                                                          gAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa                   >  1:91156/1‑93 (MQ=255)
                                                                            aGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt                 <  1:1043581/93‑1 (MQ=255)
                                                                            aGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt                 >  2:6070353/1‑93 (MQ=255)
                                                                             gctgctCTCCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTc                <  1:10014713/93‑1 (MQ=255)
                                                                              ctgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCt               >  1:5945720/1‑93 (MQ=255)
                                                                              ctgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCt               <  1:3873162/93‑1 (MQ=255)
                                                                              ctgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCt               <  2:4927230/93‑1 (MQ=255)
                                                                               tgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt              >  1:9417861/1‑93 (MQ=255)
                                                                               tgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt              >  1:2633020/1‑93 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             <  1:6785016/93‑1 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             <  2:6263772/93‑1 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             >  2:4514713/1‑93 (MQ=255)
                                                                                  accgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATg         >  1:4220726/5‑93 (MQ=255)
                                                                                  accgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATg         <  2:6620963/89‑1 (MQ=255)
                                                                                  accgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATg         >  1:36482/5‑93 (MQ=255)
                                                                                   ccgcgcgcgT‑‑CATCAACTTTGTGTTTGCGACCGGTTGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGa        <  1:2565373/90‑1 (MQ=255)
                                                                                     gcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAtt      >  2:4034410/2‑93 (MQ=255)
                                                                                      cgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTa     <  1:6563620/93‑1 (MQ=255)
                                                                                      cgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTa     >  2:7831889/1‑93 (MQ=255)
                                                                                       gcgcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc    <  2:7366123/93‑1 (MQ=255)
                                                                                        cgcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAcc   <  1:1398512/93‑1 (MQ=255)
                                                                                         gcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCt  >  1:854383/1‑93 (MQ=255)
                                                                                         gcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCt  >  2:5290472/1‑93 (MQ=255)
                                                                                             ||                                                                                         
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT  >  NC_000913/4007815‑4007996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 292 total aligned reads displayed.
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  >  NC_000913/4007814‑4008000
                                                                                                   |                                                                                               
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC                                                                                                 >  SRR4302540.2588721/1‑94 (MQ=60)
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC                                                                                                 <  SRR4302540.1818146/94‑1 (MQ=60)
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC                                                                                                 >  SRR4302540.9548996/1‑94 (MQ=60)
 GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCACAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC‑‑G                                                                                              >  SRR4302540.1444798/1‑94 (MQ=60)
 GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC‑‑G                                                                                              <  SRR4302540.4890056/94‑1 (MQ=60)
 GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC‑‑G                                                                                              >  SRR4302540.5951859/1‑94 (MQ=60)
   TGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATACCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCggc                                                                                              >  SRR4302540.5746471/1‑91 (MQ=60)
    GTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTGAC‑‑C‑‑GCGC‑‑GCggca                                                                                             <  SRR4302540.769979/94‑5 (MQ=60)
      TGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATC                                                                                           >  SRR4302540.2824252/1‑94 (MQ=60)
      TGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATC                                                                                           <  SRR4302540.917048/94‑1 (MQ=60)
       GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCA                                                                                          <  SRR4302540.616055/94‑1 (MQ=60)
       GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCA                                                                                          <  SRR4302540.1544840/94‑1 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAAC                                                                                        >  SRR4302540.2094407/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAAC                                                                                        >  SRR4302540.8365920/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAAC                                                                                        >  SRR4302540.5401733/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAAC                                                                                        >  SRR4302540.606761/1‑94 (MQ=60)
          TCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACT                                                                                       >  SRR4302540.4152995/1‑94 (MQ=60)
           CTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTT                                                                                      >  SRR4302540.8720309/1‑94 (MQ=60)
           CTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTT                                                                                      >  SRR4302540.1708246/1‑94 (MQ=60)
           CTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTT                                                                                      >  SRR4302540.1559174/1‑94 (MQ=60)
           CTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTT                                                                                      >  SRR4302540.1533123/1‑94 (MQ=60)
            TGATTTAGATGGCACGTTGCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTT                                                                                     <  SRR4302540.2600184/94‑1 (MQ=60)
            TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTT                                                                                     >  SRR4302540.6791725/1‑94 (MQ=60)
            TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTT                                                                                     >  SRR4302540.9868546/1‑94 (MQ=60)
              ATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAA‑‑C‑‑GCGC‑‑GCGGCATCCACTTTGT                                                                                   >  SRR4302540.9293075/1‑94 (MQ=60)
               TTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTG                                                                                  >  SRR4302540.4384873/1‑94 (MQ=60)
               TTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTG                                                                                  <  SRR4302540.872980/94‑1 (MQ=60)
                 TAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTT                                                                                >  SRR4302540.9431640/1‑94 (MQ=60)
                  AGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTT                                                                               <  SRR4302540.3687983/94‑1 (MQ=60)
                  AGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTT                                                                               <  SRR4302540.300/94‑1 (MQ=60)
                  AGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTT                                                                               <  SRR4302540.8793155/94‑1 (MQ=60)
                  AGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGAATCAACTGTGTGTTT                                                                               >  SRR4302540.9861147/1‑94 (MQ=60)
                     TGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCG                                                                            <  SRR4302540.1691408/94‑1 (MQ=60)
                     TGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCG                                                                            >  SRR4302540.7343821/1‑94 (MQ=60)
                      GGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGA                                                                           <  SRR4302540.9711060/94‑1 (MQ=60)
                      GGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGA                                                                           <  SRR4302540.7462120/94‑1 (MQ=60)
                       GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGAC                                                                          <  SRR4302540.6714569/94‑1 (MQ=60)
                       GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGAC                                                                          <  SRR4302540.8797133/94‑1 (MQ=60)
                       GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTAAC‑‑C‑‑GCGC‑‑GCGGAATCAACTTTGTGTTTGCGCC                                                                          >  SRR4302540.8558966/1‑94 (MQ=60)
                        CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACC                                                                         <  SRR4302540.5252213/94‑1 (MQ=60)
                        CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACC                                                                         <  SRR4302540.6098089/94‑1 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCG                                                                        >  SRR4302540.2836054/1‑94 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCG                                                                        >  SRR4302540.1315828/1‑94 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCG                                                                        >  SRR4302540.2344992/1‑94 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCG                                                                        <  SRR4302540.1155662/94‑1 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCG                                                                        >  SRR4302540.1146665/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGG                                                                       >  SRR4302540.1300779/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGG                                                                       >  SRR4302540.8482792/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGG                                                                       >  SRR4302540.1458099/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGG                                                                       >  SRR4302540.8306309/1‑94 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCCAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGAgcggc                                                                      >  SRR4302540.8909590/1‑89 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      >  SRR4302540.8909584/1‑94 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      <  SRR4302540.5881281/94‑1 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      <  SRR4302540.109120/94‑1 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     <  SRR4302540.9564709/94‑1 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     <  SRR4302540.329398/94‑1 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     <  SRR4302540.520395/94‑1 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     <  SRR4302540.9115467/94‑1 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     >  SRR4302540.6908227/1‑94 (MQ=60)
                              TCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGT                                                                   <  SRR4302540.6101473/94‑1 (MQ=60)
                              ACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGT                                                                   <  SRR4302540.6666695/94‑1 (MQ=60)
                               CTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTC                                                                  <  SRR4302540.7517799/94‑1 (MQ=60)
                                   CTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCC                                                              >  SRR4302540.1317047/1‑94 (MQ=60)
                                    TCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC                                                             <  SRR4302540.8429385/94‑1 (MQ=60)
                                     CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG                                                            <  SRR4302540.8289416/94‑1 (MQ=60)
                                     CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG                                                            >  SRR4302540.7980889/1‑94 (MQ=60)
                                      CCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGT                                                           <  SRR4302540.7513925/94‑1 (MQ=60)
                                      CCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGT                                                           >  SRR4302540.7559826/1‑94 (MQ=60)
                                      CCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGT                                                           >  SRR4302540.2542765/1‑94 (MQ=60)
                                       CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCNC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGNNNNCGNCCGGTCGNCNCCNCNNN                                                          >  SRR4302540.7375806/1‑94 (MQ=60)
                                       CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT                                                          <  SRR4302540.4054362/94‑1 (MQ=60)
                                        GACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGCGGGG‑‑CATCAACTTTGCGTTTGCGACCGGTCGTCACCACGTTG                                                         >  SRR4302540.5226601/1‑94 (MQ=60)
                                        GACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTG                                                         >  SRR4302540.8265719/1‑94 (MQ=60)
                                        GACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTG                                                         >  SRR4302540.2225483/1‑94 (MQ=60)
                                        CACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTG                                                         <  SRR4302540.7626415/94‑1 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       >  SRR4302540.6411031/1‑94 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       <  SRR4302540.7361672/94‑1 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       <  SRR4302540.926357/94‑1 (MQ=60)
                                           CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG                                                      >  SRR4302540.4419891/1‑94 (MQ=60)
                                           CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG                                                      >  SRR4302540.1072429/1‑94 (MQ=60)
                                           CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG                                                      >  SRR4302540.5013952/1‑94 (MQ=60)
                                           CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG                                                      <  SRR4302540.6408750/94‑1 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302540.244770/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     <  SRR4302540.227541/94‑1 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302540.4549250/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302540.4080697/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     <  SRR4302540.6255509/94‑1 (MQ=60)
                                             TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG                                                    <  SRR4302540.2329903/94‑1 (MQ=60)
                                              ACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGG                                                   <  SRR4302540.3029260/94‑1 (MQ=60)
                                               CGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGG                                                  <  SRR4302540.8292369/94‑1 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302540.6858158/1‑94 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302540.4978478/1‑94 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 <  SRR4302540.3779238/94‑1 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302540.8829015/1‑94 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302540.2869524/1‑94 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302540.8612296/1‑94 (MQ=60)
                                                 TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC                                                >  SRR4302540.6742406/1‑94 (MQ=60)
                                                 TTATCACCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑CGAGCGC‑‑GG‑‑CGTCAACTTTGTGTTTGCGACCGGACGTCACCAAGTTGATATGGGGC                                                >  SRR4302540.5134206/1‑94 (MQ=60)
                                                 TTAGCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC                                                <  SRR4302540.8171873/94‑1 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               <  SRR4302540.10154798/94‑1 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               >  SRR4302540.9031340/1‑94 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               <  SRR4302540.9324673/94‑1 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               <  SRR4302540.101665/94‑1 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               >  SRR4302540.9872484/1‑94 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               <  SRR4302540.6438911/94‑1 (MQ=60)
                                                   ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA                                              >  SRR4302540.4259710/1‑94 (MQ=60)
                                                   ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA                                              <  SRR4302540.6040473/94‑1 (MQ=60)
                                                    TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA                                             <  SRR4302540.4462853/94‑1 (MQ=60)
                                                    TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA                                             <  SRR4302540.4462852/94‑1 (MQ=60)
                                                    TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA                                             >  SRR4302540.7882759/1‑94 (MQ=60)
                                                      CCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATT                                           >  SRR4302540.5493515/1‑94 (MQ=60)
                                                      CCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATT                                           <  SRR4302540.4919680/94‑1 (MQ=60)
                                                       CCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTC                                          >  SRR4302540.5357338/1‑94 (MQ=60)
                                                        CTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCACATTCG                                         >  SRR4302540.10040254/1‑94 (MQ=60)
                                                        CTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG                                         >  SRR4302540.5080115/1‑94 (MQ=60)
                                                         TTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGC                                        >  SRR4302540.2982744/1‑94 (MQ=60)
                                                           ACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGA                                      >  SRR4302540.4785367/1‑94 (MQ=60)
                                                           ACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGA                                      >  SRR4302540.4785366/1‑94 (MQ=60)
                                                             GCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATA                                    <  SRR4302540.129390/94‑1 (MQ=60)
                                                             GCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATA                                    >  SRR4302540.2954378/1‑94 (MQ=60)
                                                              CCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAT                                   >  SRR4302540.2652892/1‑94 (MQ=60)
                                                               CAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAT                                  <  SRR4302540.205370/94‑1 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCACATTCGCGATAATC                                 >  SRR4302540.9402542/1‑94 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 >  SRR4302540.9658776/1‑94 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 >  SRR4302540.5317192/1‑94 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 <  SRR4302540.10009103/94‑1 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 >  SRR4302540.5534966/1‑94 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 >  SRR4302540.6163360/1‑94 (MQ=60)
                                                                 AAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCT                                <  SRR4302540.172524/94‑1 (MQ=60)
                                                                 AAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCT                                >  SRR4302540.3906092/1‑94 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               <  SRR4302540.3647132/94‑1 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               >  SRR4302540.6637631/1‑94 (MQ=60)
                                                                   GAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG                              <  SRR4302540.721653/94‑1 (MQ=60)
                                                                   GAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG                              >  SRR4302540.7314612/1‑94 (MQ=60)
                                                                    AAGCTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             <  SRR4302540.1971335/94‑1 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             >  SRR4302540.9033918/1‑94 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             >  SRR4302540.3955619/1‑94 (MQ=60)
                                                                     ATCTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG                            <  SRR4302540.10000473/94‑1 (MQ=60)
                                                                     AACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG                            <  SRR4302540.6984785/94‑1 (MQ=60)
                                                                     AACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG                            <  SRR4302540.737702/94‑1 (MQ=60)
                                                                     AACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAG                            <  SRR4302540.9869428/94‑1 (MQ=60)
                                                                      ACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGA                           >  SRR4302540.2614303/1‑94 (MQ=60)
                                                                       CTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGCT                          >  SRR4302540.1884955/1‑94 (MQ=60)
                                                                       CTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302540.1422479/1‑94 (MQ=60)
                                                                       CTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302540.10107788/1‑94 (MQ=60)
                                                                       CTCTGAAACTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCCACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302540.1422475/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.4282420/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.2678199/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.10086586/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.5079368/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.5897218/1‑94 (MQ=60)
                                                                         CTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302540.5727652/1‑94 (MQ=60)
                                                                          cggAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA                       <  SRR4302540.559723/91‑1 (MQ=60)
                                                                          TGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA                       <  SRR4302540.8755701/94‑1 (MQ=60)
                                                                          TGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA                       >  SRR4302540.9520317/1‑94 (MQ=60)
                                                                          TGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGAGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA                       <  SRR4302540.9799992/94‑1 (MQ=60)
                                                                           GAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAG                      >  SRR4302540.1900403/1‑94 (MQ=60)
                                                                           GAAGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAG                      >  SRR4302540.4129584/1‑94 (MQ=60)
                                                                             AGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC                    <  SRR4302540.1054187/94‑1 (MQ=60)
                                                                             AGCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC                    <  SRR4302540.4301460/94‑1 (MQ=60)
                                                                              GCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCT                   >  SRR4302540.6011450/1‑94 (MQ=60)
                                                                              GCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCT                   >  SRR4302540.125211/1‑94 (MQ=60)
                                                                              GCTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCT                   <  SRR4302540.3155698/94‑1 (MQ=60)
                                                                               CTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302540.9529808/1‑94 (MQ=60)
                                                                               CTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302540.4650549/1‑94 (MQ=60)
                                                                               CTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302540.2661531/1‑94 (MQ=60)
                                                                               CTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302540.3678773/1‑94 (MQ=60)
                                                                               CTGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  <  SRR4302540.8983535/94‑1 (MQ=60)
                                                                                TGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA                 >  SRR4302540.9777658/1‑94 (MQ=60)
                                                                                TGCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA                 <  SRR4302540.5575319/94‑1 (MQ=60)
                                                                                 GCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTAC                <  SRR4302540.7267288/94‑1 (MQ=60)
                                                                                 GCTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTAC                <  SRR4302540.6860042/94‑1 (MQ=60)
                                                                                  CTCACCTC‑‑GCGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA               >  SRR4302540.8471542/1‑94 (MQ=60)
                                                                                  CTCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA               >  SRR4302540.4698657/1‑94 (MQ=60)
                                                                                   TCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTGACGATAATCTGGAGATTAAGTCTTACAT              >  SRR4302540.3253610/1‑94 (MQ=60)
                                                                                   TCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302540.5777911/94‑1 (MQ=60)
                                                                                   TCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGGGTTTGCGAACGGTCGTCACCCCGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302540.2074232/94‑1 (MQ=60)
                                                                                   CCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302540.1725627/94‑1 (MQ=60)
                                                                                   CCAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGGTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302540.5777910/94‑1 (MQ=60)
                                                                                    CAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTGGCGATACTCTGGAGtttcagcgttacatg             >  SRR4302540.7911746/1‑79 (MQ=60)
                                                                                    CAC‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATG             <  SRR4302540.1085929/94‑1 (MQ=60)
                                                                                     gcaccgaGCGC‑‑GG‑‑CATCAACTTTGGGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302540.8472358/87‑1 (MQ=60)
                                                                                      G‑‑C‑‑GCGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTA         <  SRR4302540.503949/94‑1 (MQ=60)
                                                                                      G‑‑C‑‑GCGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTA         <  SRR4302540.4730244/94‑1 (MQ=60)
                                                                                      C‑‑C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACACGAT           <  SRR4302540.9509837/94‑1 (MQ=60)
                                                                                         C‑‑GCGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAC        <  SRR4302540.6636367/94‑1 (MQ=60)
                                                                                         C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          <  SRR4302540.8122318/94‑1 (MQ=60)
                                                                                         C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          >  SRR4302540.8563098/1‑94 (MQ=60)
                                                                                         C‑‑GCGC‑‑GCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          <  SRR4302540.2812741/94‑1 (MQ=60)
                                                                                             CGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCACATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      >  SRR4302540.6461288/1‑94 (MQ=60)
                                                                                             CGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      >  SRR4302540.863455/1‑94 (MQ=60)
                                                                                             CGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      <  SRR4302540.1413530/94‑1 (MQ=60)
                                                                                             CGC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      <  SRR4302540.5900314/94‑1 (MQ=60)
                                                                                              GC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC     <  SRR4302540.3890154/94‑1 (MQ=60)
                                                                                              GC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC     <  SRR4302540.4072101/94‑1 (MQ=60)
                                                                                              GC‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC     >  SRR4302540.2581778/1‑94 (MQ=60)
                                                                                               C‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    >  SRR4302540.1329847/1‑94 (MQ=60)
                                                                                               C‑‑GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    >  SRR4302540.2162421/1‑94 (MQ=60)
                                                                                                  GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCA   >  SRR4302540.9346100/1‑94 (MQ=60)
                                                                                                   G‑‑CATCAACTTTGTGTGTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  <  SRR4302540.2032588/94‑1 (MQ=60)
                                                                                                   |                                                                                               
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCAC‑‑C‑‑GCGC‑‑GC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  >  NC_000913/4007814‑4008000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑