Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,008,525 +G intergenic (+92/‑141) b4555 → / → yigM hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,008,5241.G100.0% 1315.3 / NA 398intergenic (+91/‑142)b4555/yigMhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (214/184);  total (214/184)

Only 100 of 433 total aligned reads displayed.

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611
                                                                                             |                                                                                       
  ggATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg                                                                                       >  2:3033846/1‑92 (MQ=255)
  ggATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg                                                                                       >  2:4201697/1‑92 (MQ=255)
   gATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga                                                                                      >  2:3884933/1‑91 (MQ=255)
    aTGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa                                                                                     <  2:7266780/93‑4 (MQ=255)
    aTGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa                                                                                     <  1:2792070/93‑4 (MQ=255)
     tGAGCGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag                                                                                    <  1:4050853/93‑5 (MQ=255)
     tGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag                                                                                    <  2:2070297/93‑5 (MQ=255)
     tGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag                                                                                    >  1:6916590/1‑89 (MQ=255)
       aaCGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg                                                                                   >  1:5440669/1‑93 (MQ=255)
        acgacgCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa                                                                                  <  1:6076560/93‑1 (MQ=255)
        acgacgCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa                                                                                  >  2:4539476/1‑93 (MQ=255)
         cgacgCAGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt                                                                                 <  1:4798201/93‑1 (MQ=255)
           acgCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg                                                                               >  2:4711466/1‑93 (MQ=255)
             gCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt                                                                             >  2:1897124/1‑93 (MQ=255)
             gCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt                                                                             >  2:8597625/1‑93 (MQ=255)
               cGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc                                                                           <  1:1418269/93‑1 (MQ=255)
                gAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt                                                                          >  1:9007313/1‑93 (MQ=255)
                 aaaTGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa                                                                         >  2:6802947/1‑93 (MQ=255)
                  aaTGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa                                                                        <  2:1532792/93‑1 (MQ=255)
                   aTGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       >  1:4513659/1‑93 (MQ=255)
                     gCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc                                                                     >  2:6495390/1‑93 (MQ=255)
                     gCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc                                                                     <  1:1967598/93‑1 (MQ=255)
                       tGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg                                                                   >  1:5763405/1‑93 (MQ=255)
                       tGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg                                                                   <  1:6426782/93‑1 (MQ=255)
                        gTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga                                                                  >  2:7352723/1‑93 (MQ=255)
                        gTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga                                                                  <  1:7204039/93‑1 (MQ=255)
                         tCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac                                                                 >  1:9472067/1‑93 (MQ=255)
                           gATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               >  1:6622385/1‑93 (MQ=255)
                           gATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               >  2:8910148/1‑93 (MQ=255)
                           gATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               <  2:8553131/93‑1 (MQ=255)
                            aTGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac                                                              >  2:1784020/1‑93 (MQ=255)
                            aTGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac                                                              >  2:6387962/1‑93 (MQ=255)
                                  gggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg                                                        >  2:620650/1‑93 (MQ=255)
                                   ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc                                                       >  1:2404432/1‑93 (MQ=255)
                                   ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc                                                       <  2:1664095/93‑1 (MQ=255)
                                       aggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCa                                                   <  1:549981/91‑1 (MQ=255)
                                        ggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt                                                  >  1:1594991/2‑93 (MQ=255)
                                        ggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt                                                  >  1:4696041/2‑93 (MQ=255)
                                          cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa                                                <  2:7815344/93‑1 (MQ=255)
                                          cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa                                                <  1:2998038/93‑1 (MQ=255)
                                           tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               >  2:267313/1‑93 (MQ=255)
                                            gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              <  2:2270325/93‑1 (MQ=255)
                                             cATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCt                                             <  2:5581610/93‑1 (MQ=255)
                                               ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           <  1:7850854/93‑1 (MQ=255)
                                               ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc                                           >  2:7899036/1‑93 (MQ=255)
                                                tATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg                                          >  1:8036280/1‑93 (MQ=255)
                                                tATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg                                          >  2:6553481/1‑93 (MQ=255)
                                                  tGGGCAGTGCGCCCCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        <  1:2286238/93‑1 (MQ=255)
                                                  tGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        <  2:1344794/93‑1 (MQ=255)
                                                  tGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        <  1:6348818/93‑1 (MQ=255)
                                                  tGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGAGTa                                        >  2:9217027/1‑93 (MQ=255)
                                                   gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       <  2:5242627/93‑1 (MQ=255)
                                                   gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       >  2:1230418/1‑93 (MQ=255)
                                                    ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa                                      <  2:6062765/93‑1 (MQ=255)
                                                     gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     >  2:9517499/1‑93 (MQ=255)
                                                         tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 >  1:3978188/5‑93 (MQ=255)
                                                         tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 >  2:7948942/5‑93 (MQ=255)
                                                         tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 >  2:5784540/5‑93 (MQ=255)
                                                         tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 >  1:7449919/5‑93 (MQ=255)
                                                            gcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAttt                              <  1:1207000/92‑1 (MQ=255)
                                                            gcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAttt                              >  1:836812/2‑93 (MQ=255)
                                                             caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGCCGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  1:3508941/93‑1 (MQ=255)
                                                             caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGATGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             >  1:9668821/1‑93 (MQ=255)
                                                             caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGGCGCATTATCTGCGTAAACTCTATTTa                             >  1:4268455/1‑93 (MQ=255)
                                                             caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  1:7298652/93‑1 (MQ=255)
                                                              accaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            <  1:990688/93‑1 (MQ=255)
                                                               ccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATc                           >  2:8666083/1‑93 (MQ=255)
                                                               ccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATc                           >  2:7624786/1‑93 (MQ=255)
                                                                  gCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTa                        >  2:8313257/1‑93 (MQ=255)
                                                                  gCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTa                        <  2:7105649/93‑1 (MQ=255)
                                                                      cTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGTCGCATTATCTGCGTAAACTCTATTTATCGTAATCg                    >  2:3984949/1‑93 (MQ=255)
                                                                      cTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCg                    >  2:9751283/1‑93 (MQ=255)
                                                                      cTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCg                    >  2:6261891/1‑93 (MQ=255)
                                                                         aaaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 <  2:4397894/93‑1 (MQ=255)
                                                                          aaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCt                >  1:5007471/1‑93 (MQ=255)
                                                                           aGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               <  2:5377371/93‑1 (MQ=255)
                                                                           aGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               <  1:6486778/93‑1 (MQ=255)
                                                                           aGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTACCGTAATCGATcat               >  2:368968/1‑91 (MQ=255)
                                                                            gACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCttt              >  2:2546470/1‑93 (MQ=255)
                                                                               cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  1:5931018/93‑1 (MQ=255)
                                                                               cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  2:4988595/93‑1 (MQ=255)
                                                                               cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  1:7594436/93‑1 (MQ=255)
                                                                                ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          <  1:7625289/93‑1 (MQ=255)
                                                                                ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          >  1:3275163/1‑93 (MQ=255)
                                                                                ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          >  2:318371/1‑93 (MQ=255)
                                                                                ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          >  2:5879858/1‑93 (MQ=255)
                                                                                 tCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTg         >  2:3796169/1‑93 (MQ=255)
                                                                                   aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTgtt       >  2:8121419/1‑91 (MQ=255)
                                                                                    tCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTc      >  1:8799005/1‑93 (MQ=255)
                                                                                    tCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTc      >  1:360609/1‑93 (MQ=255)
                                                                                    tCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCCCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTc      >  1:5260276/1‑93 (MQ=255)
                                                                                     cccTAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  2:9392923/93‑1 (MQ=255)
                                                                                     cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  2:9116102/93‑1 (MQ=255)
                                                                                     cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     >  2:3422047/1‑93 (MQ=255)
                                                                                     cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  1:5164054/93‑1 (MQ=255)
                                                                                     cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGAGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  1:2206663/93‑1 (MQ=255)
                                                                                      ccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAg    >  1:9285977/1‑93 (MQ=255)
                                                                                      ccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAg    >  1:10020404/1‑93 (MQ=255)
                                                                                       cGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTATTCGTTCTTTATTTGGTCAGt   >  2:2446518/1‑93 (MQ=255)
                                                                                       cGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGt   <  1:8520703/93‑1 (MQ=255)
                                                                                             |                                                                                       
CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 228 total aligned reads displayed.
CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  NC_000913/4008434‑4008618
                                                                                                 |                                                                                              
CGGGATGAACGACGCCGAAATGCTGTCGATGGCAGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G                                                                                                >  SRR4302540.3015681/1‑94 (MQ=60)
CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G                                                                                                >  SRR4302540.7421548/1‑94 (MQ=60)
  GGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G‑GA                                                                                             >  SRR4302540.2276130/1‑94 (MQ=60)
  GGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G‑GA                                                                                             <  SRR4302540.6113400/94‑1 (MQ=60)
  GGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGCGCAGTGCGCACTAGCGTCTGAAAGAGCTTCATCCCGCGCT‑G‑GA                                                                                             >  SRR4302540.3192065/1‑94 (MQ=48)
    ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCCTCCCGAGCT‑Ggagg                                                                                            >  SRR4302540.3302961/1‑90 (MQ=60)
    ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAG                                                                                            >  SRR4302540.53393/1‑94 (MQ=60)
    ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAG                                                                                            <  SRR4302540.2822214/94‑1 (MQ=60)
    ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAG                                                                                            >  SRR4302540.3302962/1‑94 (MQ=60)
     TGAGCGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGT                                                                                           <  SRR4302540.4094527/94‑1 (MQ=60)
     TGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGT                                                                                           >  SRR4302540.4262227/1‑94 (MQ=60)
     TGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGT                                                                                           >  SRR4302540.4357610/1‑94 (MQ=60)
      GAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTG                                                                                          >  SRR4302540.5500529/1‑94 (MQ=60)
        ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGAT                                                                                        >  SRR4302540.6127303/1‑94 (MQ=60)
        ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGAT                                                                                        <  SRR4302540.6144132/94‑1 (MQ=60)
        ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGAT                                                                                        <  SRR4302540.9699911/94‑1 (MQ=60)
        ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGAT                                                                                        <  SRR4302540.6819551/94‑1 (MQ=60)
        ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGAT                                                                                        >  SRR4302540.9504132/1‑94 (MQ=60)
         CGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATG                                                                                       >  SRR4302540.3527390/1‑94 (MQ=60)
         CGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATT                                                                                       <  SRR4302540.7482590/94‑1 (MQ=60)
         CGACGCAGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATT                                                                                       <  SRR4302540.4849549/94‑1 (MQ=60)
          GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTG                                                                                      >  SRR4302540.4760294/1‑94 (MQ=60)
          GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTG                                                                                      <  SRR4302540.976255/94‑1 (MQ=60)
           ACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGG                                                                                     <  SRR4302540.1956128/94‑1 (MQ=60)
            CGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGT                                                                                    <  SRR4302540.6500538/94‑1 (MQ=60)
            CGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGT                                                                                    >  SRR4302540.4424276/1‑94 (MQ=60)
             GCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTA                                                                                   <  SRR4302540.8671317/94‑1 (MQ=60)
             GCCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTA                                                                                   <  SRR4302540.8671318/94‑1 (MQ=60)
              CCGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTAC                                                                                  >  SRR4302540.9951468/1‑94 (MQ=60)
               CGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACT                                                                                 >  SRR4302540.9115372/1‑94 (MQ=60)
               CGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACT                                                                                 <  SRR4302540.1433600/94‑1 (MQ=60)
               CGAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACT                                                                                 >  SRR4302540.5125342/1‑94 (MQ=60)
                GAAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTA                                                                                >  SRR4302540.4864797/1‑94 (MQ=60)
                 AAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAA                                                                               <  SRR4302540.2339518/94‑1 (MQ=60)
                 AAATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAA                                                                               >  SRR4302540.7664788/1‑94 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.1092993/94‑1 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              >  SRR4302540.4562562/1‑94 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.3486396/94‑1 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.9594037/94‑1 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.4819319/94‑1 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.8502593/94‑1 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGAAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              >  SRR4302540.1692599/1‑94 (MQ=60)
                  AATGCTGTCGATGGC‑GGGGAAAA‑‑GCTGCATTATGGGGAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAAT                                                                              <  SRR4302540.2308784/94‑1 (MQ=60)
                   ATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATG                                                                             >  SRR4302540.4671167/1‑94 (MQ=60)
                   ATGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATG                                                                             >  SRR4302540.9205391/1‑94 (MQ=60)
                    TGCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGC                                                                            <  SRR4302540.4878703/94‑1 (MQ=60)
                     GCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCC                                                                           <  SRR4302540.1988968/94‑1 (MQ=60)
                     GCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCC                                                                           >  SRR4302540.5349607/1‑94 (MQ=60)
                     GCTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCC                                                                           >  SRR4302540.2454403/1‑94 (MQ=60)
                      CTGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCG                                                                          >  SRR4302540.5827041/1‑94 (MQ=60)
                       TGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGA                                                                         >  SRR4302540.2126164/1‑94 (MQ=60)
                       TGTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGA                                                                         <  SRR4302540.6498317/94‑1 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGGCCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302540.654996/94‑1 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        >  SRR4302540.9584414/1‑94 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302540.7711930/94‑1 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        >  SRR4302540.4478859/1‑94 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        >  SRR4302540.3558263/1‑94 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        >  SRR4302540.3558261/1‑94 (MQ=60)
                        GTCGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302540.7284352/94‑1 (MQ=60)
                          CGATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGA                                                                      >  SRR4302540.6695708/1‑94 (MQ=60)
                           GATGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGAC                                                                     <  SRR4302540.2869215/94‑1 (MQ=60)
                            tcgatgtgtgggaaaggctgcattatgcgcagttcgccaCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACG                                                                       <  SRR4302540.7043824/55‑1 (MQ=60)
                             TGGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGC                                                                   >  SRR4302540.6683588/1‑94 (MQ=60)
                              GGC‑GGGGAAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCG                                                                  >  SRR4302540.7294416/1‑94 (MQ=60)
                               GG‑GGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGT                                                                <  SRR4302540.464678/94‑1 (MQ=60)
                               GG‑GGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGT                                                                <  SRR4302540.2376231/94‑1 (MQ=60)
                                  GGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGC                                                              >  SRR4302540.7461626/1‑94 (MQ=60)
                                  GGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGC                                                              >  SRR4302540.2430363/1‑94 (MQ=60)
                                  GGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGC                                                              >  SRR4302540.5150653/1‑94 (MQ=60)
                                   GG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCC                                                             <  SRR4302540.1570114/94‑1 (MQ=60)
                                   GG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCC                                                             >  SRR4302540.9593833/1‑94 (MQ=60)
                                   GG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCC                                                             <  SRR4302540.3858440/94‑1 (MQ=60)
                                   GG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCC                                                             <  SRR4302540.8968753/94‑1 (MQ=60)
                                    ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302540.880245/86‑1 (MQ=60)
                                    ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302540.654686/86‑1 (MQ=60)
                                    G‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCG                                                            <  SRR4302540.731494/94‑1 (MQ=60)
                                    G‑‑AAAAGGCTGCATTATGTGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAATGATTGGTACTAATGCCGACGACGCGGTGCC                                                             <  SRR4302540.3858442/94‑1 (MQ=60)
                                       AAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCA                                                          >  SRR4302540.8054694/1‑94 (MQ=60)
                                       AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           >  SRR4302540.6181887/1‑94 (MQ=60)
                                       AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           >  SRR4302540.438000/1‑94 (MQ=60)
                                        AG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT                                                         >  SRR4302540.7680122/1‑94 (MQ=60)
                                        AG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT                                                         <  SRR4302540.555972/94‑1 (MQ=60)
                                        AG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT                                                         >  SRR4302540.1612420/1‑94 (MQ=60)
                                        AG‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAT                                                         >  SRR4302540.6823199/1‑94 (MQ=60)
                                         G‑‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT                                                        <  SRR4302540.5284871/94‑1 (MQ=60)
                                            GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTA                                                       >  SRR4302540.5962625/1‑94 (MQ=60)
                                             CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAT                                                      <  SRR4302540.3031069/94‑1 (MQ=60)
                                             CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAT                                                      >  SRR4302540.8186554/1‑94 (MQ=60)
                                             CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATCAT                                                      <  SRR4302540.2988283/94‑1 (MQ=60)
                                              TGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC                                                     >  SRR4302540.590847/1‑94 (MQ=60)
                                               GCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT                                                    <  SRR4302540.5745880/94‑1 (MQ=60)
                                               GCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT                                                    <  SRR4302540.7107307/94‑1 (MQ=60)
                                                CATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG                                                   <  SRR4302540.10151544/94‑1 (MQ=60)
                                                CATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG                                                   <  SRR4302540.8414917/94‑1 (MQ=60)
                                                 ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  <  SRR4302540.9490683/94‑1 (MQ=60)
                                                 ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  >  SRR4302540.2050286/1‑94 (MQ=60)
                                                 ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  >  SRR4302540.5993643/1‑94 (MQ=60)
                                                  TTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG                                                 <  SRR4302540.7942594/94‑1 (MQ=60)
                                                  TTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG                                                 <  SRR4302540.6475924/94‑1 (MQ=60)
                                                  TTATGGGCAGTGCGCACCAACGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG                                                 <  SRR4302540.1376188/94‑1 (MQ=60)
                                                   TATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGT                                                >  SRR4302540.1499457/1‑94 (MQ=60)
                                                    ATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTA                                               >  SRR4302540.8006520/1‑94 (MQ=60)
                                                     TGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAA                                              <  SRR4302540.6419520/94‑1 (MQ=60)
                                                     TGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAA                                              <  SRR4302540.9281025/94‑1 (MQ=60)
                                                       GGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAC                                            >  SRR4302540.6439402/1‑94 (MQ=60)
                                                        GCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT                                           <  SRR4302540.2196522/94‑1 (MQ=60)
                                                         gagtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          <  SRR4302540.3095709/87‑1 (MQ=60)
                                                         CAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          >  SRR4302540.4512171/1‑94 (MQ=60)
                                                          AGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCT                                         >  SRR4302540.8100683/1‑94 (MQ=60)
                                                          AGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGAGTAAACTCT                                         >  SRR4302540.521497/1‑94 (MQ=60)
                                                           gtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA                                        >  SRR4302540.4021042/6‑94 (MQ=60)
                                                           gtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA                                        >  SRR4302540.4021043/6‑94 (MQ=60)
                                                           gtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA                                        >  SRR4302540.5443885/6‑94 (MQ=60)
                                                           gtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA                                        >  SRR4302540.7532957/6‑94 (MQ=60)
                                                            tgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAT                                       <  SRR4302540.2424318/90‑1 (MQ=60)
                                                             gcgccaCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATT                                      <  SRR4302540.4027844/88‑1 (MQ=60)
                                                              cgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTT                                     >  SRR4302540.845701/3‑94 (MQ=60)
                                                              cgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTT                                     >  SRR4302540.691388/3‑94 (MQ=60)
                                                               GCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGATGCGGTGCCGCATTATCTGCGTAAACTCTATTTA                                    >  SRR4302540.9782623/1‑94 (MQ=60)
                                                               GCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGGCGCATTATCTGCGTAAACTCTATTTA                                    >  SRR4302540.4314877/1‑94 (MQ=60)
                                                               GCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTA                                    <  SRR4302540.1219387/94‑1 (MQ=60)
                                                               GCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTA                                    >  SRR4302540.7904923/1‑94 (MQ=60)
                                                                CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGCCGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302540.3547162/94‑1 (MQ=60)
                                                                CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302540.1403597/94‑1 (MQ=60)
                                                                CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302540.6725605/94‑1 (MQ=60)
                                                                CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302540.7380116/94‑1 (MQ=60)
                                                                CACAAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302540.7380107/94‑1 (MQ=60)
                                                                 ACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC                                  <  SRR4302540.1000798/94‑1 (MQ=60)
                                                                  CCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCG                                 <  SRR4302540.4763520/94‑1 (MQ=60)
                                                                  CCAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCG                                 >  SRR4302540.558792/1‑94 (MQ=60)
                                                                   CAGCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGT                                <  SRR4302540.491531/94‑1 (MQ=60)
                                                                     GCGTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAA                              <  SRR4302540.7142995/94‑1 (MQ=60)
                                                                       GTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATC                            >  SRR4302540.8198912/1‑94 (MQ=60)
                                                                       GTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATC                            >  SRR4302540.4141526/1‑94 (MQ=60)
                                                                       GTCTGAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATC                            >  SRR4302540.4141527/1‑94 (MQ=60)
                                                                           GAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTC                        <  SRR4302540.8539369/94‑1 (MQ=60)
                                                                           GAAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTC                        >  SRR4302540.5183688/1‑94 (MQ=60)
                                                                            AAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCT                       <  SRR4302540.2520619/94‑1 (MQ=60)
                                                                            AAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCT                       >  SRR4302540.9047500/1‑94 (MQ=60)
                                                                            AAAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCT                       >  SRR4302540.5061703/1‑94 (MQ=60)
                                                                             AAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302540.7795124/94‑1 (MQ=60)
                                                                             AAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      >  SRR4302540.6456858/1‑94 (MQ=60)
                                                                             AAGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      >  SRR4302540.2301730/1‑94 (MQ=60)
                                                                              AGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302540.10080215/94‑1 (MQ=60)
                                                                              AGACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302540.6558920/94‑1 (MQ=60)
                                                                              AGACCTTCATCCCGAGCT‑GAAAGTGATGGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302540.7095381/94‑1 (MQ=60)
                                                                               AACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTA                    <  SRR4302540.754557/94‑1 (MQ=60)
                                                                                gccctcatccccaggtgG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAT                   <  SRR4302540.8074868/77‑1 (MQ=60)
                                                                                ACCTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAT                   <  SRR4302540.9926368/94‑1 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.4046433/94‑1 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.3602394/94‑1 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302540.3310928/1‑94 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302540.922042/1‑94 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.7679757/94‑1 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.7679758/94‑1 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302540.5698461/1‑94 (MQ=60)
                                                                                  CTTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.5996557/94‑1 (MQ=60)
                                                                                  CTTCATCACTAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTTCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302540.7679759/94‑1 (MQ=60)
                                                                                   gtgatcgcgagctgG‑AAGTGATTGGTACTAATGCCGACGCCGCGGTCCCGCAGTATCTGCGTAAACTCTATTGATCGTAATCGTTCTTTATTTG                <  SRR4302540.5518609/80‑1 (MQ=60)
                                                                                   TTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                <  SRR4302540.5518608/94‑1 (MQ=60)
                                                                                   TTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                <  SRR4302540.7513725/94‑1 (MQ=60)
                                                                                   TTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                >  SRR4302540.1359646/1‑94 (MQ=60)
                                                                                   TTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                >  SRR4302540.1622272/1‑94 (MQ=60)
                                                                                   TTCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                <  SRR4302540.7711041/94‑1 (MQ=60)
                                                                                    TCATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGG               <  SRR4302540.3146773/94‑1 (MQ=60)
                                                                                     CATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGT              >  SRR4302540.2341765/1‑94 (MQ=60)
                                                                                     CATCCCCAGCTGG‑AAGTGATTGGTACTAATGCCGGCGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGT              <  SRR4302540.165922/94‑1 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             <  SRR4302540.3877697/94‑1 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302540.364313/1‑94 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302540.8900739/1‑94 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302540.5252518/1‑94 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302540.663574/1‑94 (MQ=60)
                                                                                      ATCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCCCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302540.5317668/1‑94 (MQ=60)
                                                                                       TCCCGAGCTGG‑AAGTGATTGTTCCTAATGCCGACGACGCGGTGCCGCATgctctccttagcctccactgagcgaaattgttgtttattcggcca            >  SRR4302540.9963042/1‑49 (MQ=53)
                                                                                       TCCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCA            >  SRR4302540.8547659/1‑94 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302540.5460909/94‑1 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           >  SRR4302540.10137023/1‑94 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           >  SRR4302540.9396947/1‑94 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302540.9846009/94‑1 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302540.5220207/94‑1 (MQ=60)
                                                                                        CCCGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGAGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302540.2230500/94‑1 (MQ=60)
                                                                                          CGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT         <  SRR4302540.8619724/94‑1 (MQ=60)
                                                                                          CGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT         <  SRR4302540.6026680/94‑1 (MQ=60)
                                                                                          CGAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT         >  SRR4302540.1152260/1‑94 (MQ=60)
                                                                                           GAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTG        >  SRR4302540.4519457/1‑94 (MQ=60)
                                                                                           GAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTG        <  SRR4302540.4058402/94‑1 (MQ=60)
                                                                                           GAGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTG        <  SRR4302540.4058401/94‑1 (MQ=60)
                                                                                           GAGCTGG‑AAGTGATTGATACTAATGCCGACGACGCAGTCCCGCTTTATCTGAATAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTG        <  SRR4302540.6180760/94‑1 (MQ=60)
                                                                                            AGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGT       >  SRR4302540.9340001/1‑94 (MQ=60)
                                                                                            AGCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGC       >  SRR4302540.6785468/1‑94 (MQ=60)
                                                                                             GCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTC      >  SRR4302540.6333593/1‑94 (MQ=60)
                                                                                             GCTGG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTC      <  SRR4302540.9500750/94‑1 (MQ=60)
                                                                                              ctgG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCA     >  SRR4302540.1539608/4‑94 (MQ=60)
                                                                                               tgG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAA    >  SRR4302540.1181255/3‑94 (MQ=60)
                                                                                               tgG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAA    >  SRR4302540.4493819/3‑94 (MQ=60)
                                                                                               tgG‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAA    >  SRR4302540.8867117/3‑94 (MQ=60)
                                                                                               G‑G‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAAC   >  SRR4302540.2778236/1‑94 (MQ=60)
                                                                                                 G‑AAGTGATTGGTACTAATGCCGACGACGGCGTGCCGCATTATCCTCGTAAACTCTATTTATCCTAATCGTTCTTTATTTGGTCAGTTGTCAACC  <  SRR4302540.6585661/94‑1 (MQ=60)
                                                                                                 G‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  SRR4302540.2194476/1‑94 (MQ=60)
                                                                                                 G‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  SRR4302540.9260978/1‑94 (MQ=60)
                                                                                                 |                                                                                              
CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G‑AAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  NC_000913/4008434‑4008618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑