Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,060,112	A→G	Y96C (TAT→TGT)	yihN →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,060,112	0	A	G	99.5%	1819.3 / ‑4.4	578	Y96C (TAT→TGT)	yihN	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (260/315); total (261/317)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 597 total aligned reads displayed.

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

ttGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGtt                                                                                         >  2:2780452/1‑93 (MQ=255)

ttGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGtt                                                                                         <  1:6319009/93‑1 (MQ=255)

ttGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGtt                                                                                         <  2:6943491/93‑1 (MQ=255)

 tGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTg                                                                                        >  1:9756187/1‑93 (MQ=255)

 tGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTg                                                                                        <  2:1219757/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  2:8997411/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       >  2:7913263/1‑93 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  2:1794206/93‑1 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       >  2:4270192/1‑93 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  2:9501334/93‑1 (MQ=255)

    cGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgggg                                                                                     >  1:5670080/1‑93 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGc                                                                                    >  1:9338696/1‑93 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGc                                                                                    >  1:9585083/1‑93 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCCCACGCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCGGGGGTGTTGGGGc                                                                                    <  2:5838671/93‑1 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCa                                                                                   >  2:1624002/1‑93 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCa                                                                                   <  2:9334784/93‑1 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCa                                                                                   >  1:2501505/1‑93 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAt                                                                                  <  2:7114691/93‑1 (MQ=255)

       tAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAt                                                                                  >  2:9766503/1‑93 (MQ=255)

        aaaCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATc                                                                                 >  2:7348874/1‑93 (MQ=255)

        aaaCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATc                                                                                 <  1:54000/93‑1 (MQ=255)

           cTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctc                                                                              <  2:8126452/93‑1 (MQ=255)

            tACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctct                                                                             <  2:8649646/93‑1 (MQ=255)

            tACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctct                                                                             >  1:7258116/1‑93 (MQ=255)

             aCCGCGCAGATACACCATGTCATTCTCACTCATTGCGACATGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCtt                                                                            >  1:3273890/1‑93 (MQ=255)

             aCCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCtt                                                                            <  2:8827083/93‑1 (MQ=255)

             aCCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCtt                                                                            >  2:4036827/1‑93 (MQ=255)

              ccGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCttt                                                                           <  1:7922771/93‑1 (MQ=255)

               cgcgCAGATCCCCCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTTTTTGACGAAAATGCCGGGTTGTTGGGGCATCCTCTTTg                                                                          <  2:7578337/93‑1 (MQ=255)

               cgcgCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTg                                                                          >  1:8126971/1‑93 (MQ=255)

                gcgcAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGt                                                                         <  2:9151842/93‑1 (MQ=255)

                   cAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTg                                                                      <  2:6881487/93‑1 (MQ=255)

                    aGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTgg                                                                     >  2:5599413/1‑93 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTggg                                                                    >  1:8635486/1‑93 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGGGTTTATTTGACGACAATGCCGGGGCGTTGGGTCATCCTATTGGCCTggg                                                                    >  1:4988790/1‑93 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   >  1:2677401/1‑93 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   <  2:4457861/93‑1 (MQ=255)

                        acacCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgcgc                                                                 >  1:5212552/1‑93 (MQ=255)

                         cacCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGCGATGGGGCATCCCCTTTGTCTGGGCGCt                                                                >  1:6120370/1‑93 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTa                                                               <  2:1444123/93‑1 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTa                                                               >  1:22469/1‑93 (MQ=255)

                           ccATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAt                                                              <  1:6918385/93‑1 (MQ=255)

                            cATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAtt                                                             <  1:8915016/93‑1 (MQ=255)

                             aTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAttt                                                            <  1:200067/93‑1 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           <  1:4275603/93‑1 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           >  1:3741580/1‑93 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           >  2:3511122/1‑93 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           >  1:2817434/1‑93 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           >  1:4664324/1‑93 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         <  2:1310651/93‑1 (MQ=255)

                                   ttCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGtt                                                      >  2:3033971/1‑93 (MQ=255)

                                   ttCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGtt                                                      <  1:3016846/93‑1 (MQ=255)

                                    tctcACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTa                                                     >  1:6604017/1‑93 (MQ=255)

                                    tctcACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTa                                                     >  2:6307051/1‑93 (MQ=255)

                                      tcactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACt                                                   >  2:9619203/1‑93 (MQ=255)

                                        actcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTg                                                 <  2:6027854/93‑1 (MQ=255)

                                        actcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTg                                                 >  1:1571417/1‑93 (MQ=255)

                                           caTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGGGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGa                                              >  1:8016630/1‑93 (MQ=255)

                                            aTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAc                                             >  2:8429092/1‑93 (MQ=255)

                                            aTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAc                                             >  1:1149117/1‑93 (MQ=255)

                                             ttGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACa                                            >  1:7599301/1‑93 (MQ=255)

                                              tGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACat                                           <  1:9107007/93‑1 (MQ=255)

                                                cGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatga                                         <  1:10028201/93‑1 (MQ=255)

                                                cGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatga                                         <  2:2619192/93‑1 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgat                                        <  2:7232312/93‑1 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgat                                        <  1:1403717/93‑1 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgat                                        <  2:6561616/93‑1 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgat                                        >  2:5477985/1‑93 (MQ=255)

                                                 gACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgat                                        >  2:3132321/1‑93 (MQ=255)

                                                  aCAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgatg                                       >  2:3288570/1‑93 (MQ=255)

                                                  aCAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgatg                                       >  2:9056155/1‑93 (MQ=255)

                                                   cAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAtgatga                                      <  1:480106/93‑1 (MQ=255)

                                                         tACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGc                                >  1:4204139/1‑93 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTGTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  2:1136231/93‑1 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  2:10011958/93‑1 (MQ=255)

                                                                tgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCtt                         >  2:5006438/1‑93 (MQ=255)

                                                                  tttATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGc                       >  1:4009520/1‑93 (MQ=255)

                                                                     aTTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTCGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCa                    <  1:9437688/93‑1 (MQ=255)

                                                                      tttGACGACAATGCTGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   <  1:3506879/93‑1 (MQ=255)

                                                                      tttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   >  1:1880951/1‑93 (MQ=255)

                                                                      tttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   >  2:2439321/1‑93 (MQ=255)

                                                                      tttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCaa                   >  2:620419/1‑93 (MQ=255)

                                                                       ttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAg                  <  1:6731572/93‑1 (MQ=255)

                                                                        tGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGt                 <  1:174062/93‑1 (MQ=255)

                                                                        tGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGt                 >  2:3783682/1‑93 (MQ=255)

                                                                        tGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGt                 <  1:7441111/93‑1 (MQ=255)

                                                                           cgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCgg              >  1:6823585/1‑93 (MQ=255)

                                                                           cgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCgg              <  2:3457975/93‑1 (MQ=255)

                                                                            gacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGt             <  2:4778730/93‑1 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            >  2:9890868/1‑93 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            <  1:4539157/93‑1 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGAGCTATTTGGCGTTACTTGCGACATGATGACCTGGCCGGTCTTGCTCAAGTCGGTa            <  2:7710417/93‑1 (MQ=255)

                                                                             acAATGCCGCGGTGTGGGGGCATCCTCTTTGGCTGGGTGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            <  1:7755301/93‑1 (MQ=255)

                                                                              cAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTaa           >  1:2350426/1‑93 (MQ=255)

                                                                               aaTGCCGGGGGGTTGGGGCATCCTCTTTGTCTAGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCCGGCTTGCTCAAGTCGGTaat          >  2:2896598/1‑92 (MQ=255)

                                                                                aTGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGt         <  2:2107010/93‑1 (MQ=255)

                                                                                   ccGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGa      <  2:5731789/93‑1 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    >  1:848683/1‑93 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    <  2:5380381/93‑1 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    >  2:3612229/1‑93 (MQ=255)

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 295 total aligned reads displayed.

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  NC_000913/4060019‑4060205

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               <  SRR4302540.8760314/94‑1 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTG                                                                                               <  SRR4302540.8760313/94‑1 (MQ=60)

 TTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGT                                                                                              >  SRR4302540.446642/1‑94 (MQ=60)

   TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTG                                                                                            >  SRR4302540.9870644/1‑94 (MQ=60)

   TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTG                                                                                            <  SRR4302540.6389374/94‑1 (MQ=60)

   TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTG                                                                                            <  SRR4302540.2659308/94‑1 (MQ=60)

   TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTG                                                                                            <  SRR4302540.5351015/94‑1 (MQ=60)

   TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTG                                                                                            <  SRR4302540.8169181/94‑1 (MQ=60)

    TGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGG                                                                                           <  SRR4302540.504399/94‑1 (MQ=60)

    TGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGG                                                                                           >  SRR4302540.9111390/1‑94 (MQ=60)

     GCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGG                                                                                          >  SRR4302540.4894665/1‑94 (MQ=60)

     GCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGG                                                                                          <  SRR4302540.9719853/94‑1 (MQ=60)

      CCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGG                                                                                         >  SRR4302540.5732518/1‑94 (MQ=60)

       CGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGC                                                                                        >  SRR4302540.4556807/1‑94 (MQ=60)

       CGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGC                                                                                        >  SRR4302540.9449994/1‑94 (MQ=60)

       CGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGC                                                                                        >  SRR4302540.9698241/1‑94 (MQ=60)

       CGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGC                                                                                        >  SRR4302540.2550572/1‑94 (MQ=60)

        GATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCA                                                                                       >  SRR4302540.297166/1‑94 (MQ=60)

        GATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCA                                                                                       >  SRR4302540.1958445/1‑94 (MQ=60)

        GATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCA                                                                                       >  SRR4302540.2528495/1‑94 (MQ=60)

        GATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCA                                                                                       <  SRR4302540.9193967/94‑1 (MQ=60)

         ATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAT                                                                                      >  SRR4302540.2326604/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    <  SRR4302540.54541/94‑1 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    >  SRR4302540.2549972/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    <  SRR4302540.10154590/94‑1 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    >  SRR4302540.6995364/1‑94 (MQ=60)

           AAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCC                                                                                    <  SRR4302540.7997280/94‑1 (MQ=60)

            AACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCT                                                                                   >  SRR4302540.3829241/1‑94 (MQ=60)

            AACTAACGCGCAGATACAGCATGTCATTCGCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCT                                                                                   <  SRR4302540.8058676/94‑1 (MQ=60)

              CTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCT                                                                                 >  SRR4302540.5483286/1‑94 (MQ=60)

               TACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACATGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTT                                                                                >  SRR4302540.3309630/1‑94 (MQ=60)

               TACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTT                                                                                <  SRR4302540.8681753/94‑1 (MQ=60)

               TACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTT                                                                                <  SRR4302540.4754452/94‑1 (MQ=60)

               TACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTT                                                                                <  SRR4302540.3939630/94‑1 (MQ=60)

               TACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTT                                                                                >  SRR4302540.4286248/1‑94 (MQ=60)

                ACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTT                                                                               <  SRR4302540.9185419/94‑1 (MQ=60)

                ACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTT                                                                               <  SRR4302540.7464052/94‑1 (MQ=60)

                ACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTT                                                                               <  SRR4302540.5290381/94‑1 (MQ=60)

                 CCGCGCAGATACACCATGTCATTCTCTCTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGTGTGTTGGGGCATCCTCTTTG                                                                              <  SRR4302540.4211775/94‑1 (MQ=60)

                 CCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTG                                                                              >  SRR4302540.8221299/1‑94 (MQ=60)

                 CCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTG                                                                              <  SRR4302540.8015123/94‑1 (MQ=60)

                  CGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGT                                                                             <  SRR4302540.2526128/94‑1 (MQ=60)

                  CGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGT                                                                             >  SRR4302540.1610379/1‑94 (MQ=60)

                  CGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGT                                                                             >  SRR4302540.1129470/1‑94 (MQ=60)

                    CGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCT                                                                           <  SRR4302540.9229880/94‑1 (MQ=60)

                    CGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCT                                                                           <  SRR4302540.379030/94‑1 (MQ=60)

                    CGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCT                                                                           <  SRR4302540.3706747/94‑1 (MQ=60)

                     GCAGATACCCCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCACTTTGTCTG                                                                          <  SRR4302540.181916/94‑1 (MQ=60)

                     GCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTG                                                                          <  SRR4302540.5227653/94‑1 (MQ=60)

                      CAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGG                                                                         <  SRR4302540.784413/94‑1 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302540.1255737/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302540.1380733/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        >  SRR4302540.10091795/1‑94 (MQ=60)

                       AGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGG                                                                        <  SRR4302540.7313547/94‑1 (MQ=60)

                        GATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGG                                                                       >  SRR4302540.9683513/1‑94 (MQ=60)

                        GATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGC                                                                       <  SRR4302540.6433123/94‑1 (MQ=60)

                        GATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGC                                                                       >  SRR4302540.2706377/1‑94 (MQ=60)

                         ATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCG                                                                      >  SRR4302540.7520811/1‑94 (MQ=60)

                          TACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGC                                                                     >  SRR4302540.5269350/1‑94 (MQ=60)

                           ACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGCGATGGGGCATCCCCTTTGTCTGGGCGCT                                                                    >  SRR4302540.6188530/1‑94 (MQ=60)

                            CACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTA                                                                   >  SRR4302540.814505/1‑94 (MQ=60)

                            CACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTA                                                                   >  SRR4302540.22720/1‑94 (MQ=60)

                              CCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATT                                                                 <  SRR4302540.6995366/94‑1 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                >  SRR4302540.3371195/1‑94 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                >  SRR4302540.4800182/1‑94 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                <  SRR4302540.41225/94‑1 (MQ=60)

                               CATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTT                                                                >  SRR4302540.9484226/1‑94 (MQ=60)

                                CTGTCATTCTCACTCATTGCGACAGGGTTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302540.8821072/94‑1 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               >  SRR4302540.3782405/1‑94 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               >  SRR4302540.4714256/1‑94 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302540.202040/94‑1 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302540.2259240/94‑1 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               >  SRR4302540.2864756/1‑94 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               >  SRR4302540.2847876/1‑94 (MQ=60)

                                ATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTG                                                               <  SRR4302540.2708955/94‑1 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              <  SRR4302540.4321846/94‑1 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              <  SRR4302540.4322109/94‑1 (MQ=60)

                                 TGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              >  SRR4302540.4398169/1‑94 (MQ=60)

                                 TGTCAGTCTCACTCATTGCGACAGGATGACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGG                                                              <  SRR4302540.4614846/94‑1 (MQ=60)

                                  GTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGC                                                             <  SRR4302540.6312763/94‑1 (MQ=60)

                                   TCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCAGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCG                                                            <  SRR4302540.768809/94‑1 (MQ=60)

                                    CATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGT                                                           >  SRR4302540.5084018/1‑94 (MQ=60)

                                    CATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGT                                                           <  SRR4302540.6735472/94‑1 (MQ=60)

                                    CATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGT                                                           >  SRR4302540.2782857/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302540.9336184/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302540.3259746/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302540.9741401/1‑94 (MQ=60)

                                     ATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGAGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTT                                                          >  SRR4302540.2501432/1‑94 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         <  SRR4302540.1767945/94‑1 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         >  SRR4302540.1820277/1‑94 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         >  SRR4302540.6677146/1‑94 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         >  SRR4302540.4406887/1‑94 (MQ=60)

                                      TTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         <  SRR4302540.3050012/94‑1 (MQ=60)

                                      GTCTCACTCATGACGACACGATTGCTGGGTGTGTATTTGACGACAATGCCGGGGTGTCGGCGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTA                                                         <  SRR4302540.3050013/94‑1 (MQ=60)

                                       TCTCGCTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTAC                                                        <  SRR4302540.6448525/94‑1 (MQ=60)

                                       TCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTAC                                                        <  SRR4302540.7361896/94‑1 (MQ=60)

                                        CTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACT                                                       <  SRR4302540.1266661/94‑1 (MQ=60)

                                        CTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACT                                                       <  SRR4302540.5892235/94‑1 (MQ=60)

                                        CTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACT                                                       >  SRR4302540.498656/1‑94 (MQ=60)

                                        CTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACT                                                       <  SRR4302540.3991793/94‑1 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      >  SRR4302540.2348367/1‑94 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      <  SRR4302540.9139765/94‑1 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      >  SRR4302540.3517093/1‑94 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      <  SRR4302540.7260249/94‑1 (MQ=60)

                                         TCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTT                                                      <  SRR4302540.7260248/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     >  SRR4302540.3001632/1‑94 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     <  SRR4302540.1500527/94‑1 (MQ=60)

                                          CACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTG                                                     >  SRR4302540.1588634/1‑94 (MQ=60)

                                           ACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGC                                                    >  SRR4302540.8240047/1‑94 (MQ=60)

                                            CTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCG                                                   <  SRR4302540.7632215/94‑1 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  <  SRR4302540.5633257/94‑1 (MQ=60)

                                             TCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGGGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGA                                                  >  SRR4302540.8109873/1‑94 (MQ=60)

                                              CATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAC                                                 >  SRR4302540.1161101/1‑94 (MQ=60)

                                              CATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGAC                                                 >  SRR4302540.6733413/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302540.2021275/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302540.870747/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302540.7684687/1‑94 (MQ=60)

                                               ATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACA                                                >  SRR4302540.3568685/1‑94 (MQ=60)

                                                TTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAT                                               <  SRR4302540.3204430/94‑1 (MQ=60)

                                                 TGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATG                                              <  SRR4302540.9216451/94‑1 (MQ=60)

                                                   CGACAGTATTACTGGTTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGAT                                            <  SRR4302540.6855526/94‑1 (MQ=60)

                                                   CGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCTTTACTTGCGACATGAT                                            <  SRR4302540.9912402/94‑1 (MQ=60)

                                                   CGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGAT                                            <  SRR4302540.10144873/94‑1 (MQ=60)

                                                   CGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGAT                                            <  SRR4302540.6855527/94‑1 (MQ=60)

                                                   CGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGAT                                            <  SRR4302540.1610854/94‑1 (MQ=60)

                                                    GACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATG                                           <  SRR4302540.1418829/94‑1 (MQ=60)

                                                     ACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGA                                          <  SRR4302540.2156478/94‑1 (MQ=60)

                                                      CAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAA                                         <  SRR4302540.485251/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302540.1925060/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302540.1865300/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302540.4765087/94‑1 (MQ=60)

                                                       AGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAAC                                        <  SRR4302540.9753199/94‑1 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       <  SRR4302540.2152825/94‑1 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       >  SRR4302540.5022719/1‑94 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       <  SRR4302540.9499292/94‑1 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       <  SRR4302540.4123780/94‑1 (MQ=60)

                                                        GGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACT                                       <  SRR4302540.8211367/94‑1 (MQ=60)

                                                          ATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGG                                     >  SRR4302540.5104290/1‑94 (MQ=60)

                                                          ATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGG                                     <  SRR4302540.6944169/94‑1 (MQ=60)

                                                           TTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGC                                    >  SRR4302540.4249896/1‑94 (MQ=60)

                                                           TTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGC                                    >  SRR4302540.8071900/1‑94 (MQ=60)

                                                           TTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGC                                    >  SRR4302540.6350144/1‑94 (MQ=60)

                                                             TCTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCG                                  <  SRR4302540.8582069/94‑1 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 >  SRR4302540.3685086/1‑94 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 >  SRR4302540.460550/1‑94 (MQ=60)

                                                              CTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGG                                 >  SRR4302540.6945549/1‑94 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                <  SRR4302540.1562426/94‑1 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                <  SRR4302540.9675279/94‑1 (MQ=60)

                                                               TGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGT                                <  SRR4302540.4283827/94‑1 (MQ=60)

                                                                GGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGGCATGATGAACTGGCCGGTT                               >  SRR4302540.2753937/1‑94 (MQ=60)

                                                                GGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTT                               >  SRR4302540.5316839/1‑94 (MQ=60)

                                                                GGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTC                               >  SRR4302540.6737540/1‑94 (MQ=60)

                                                                 GGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCT                              <  SRR4302540.247375/94‑1 (MQ=60)

                                                                 GGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCT                              >  SRR4302540.6869844/1‑94 (MQ=60)

                                                                  GTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTT                             >  SRR4302540.151624/1‑94 (MQ=60)

                                                                  GTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTT                             <  SRR4302540.1729311/94‑1 (MQ=60)

                                                                  GTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTT                             <  SRR4302540.116215/94‑1 (MQ=60)

                                                                   TGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTG                            <  SRR4302540.9530027/94‑1 (MQ=60)

                                                                   TGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTG                            >  SRR4302540.8933698/1‑94 (MQ=60)

                                                                    GTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGC                           >  SRR4302540.4052697/1‑94 (MQ=60)

                                                                     TTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCT                          <  SRR4302540.9585460/94‑1 (MQ=60)

                                                                     TTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCT                          >  SRR4302540.8636687/1‑94 (MQ=60)

                                                                      TTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTC                         >  SRR4302540.8727725/1‑94 (MQ=60)

                                                                      TTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTC                         >  SRR4302540.2318959/1‑94 (MQ=60)

                                                                      TTATTTGACGACAATGCCGGGGCGATGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCGGGTCTTGCTC                         >  SRR4302540.8992556/1‑94 (MQ=60)

                                                                       TATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCA                        <  SRR4302540.5578309/94‑1 (MQ=60)

                                                                        ATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAA                       >  SRR4302540.1901550/1‑94 (MQ=60)

                                                                        ATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAA                       <  SRR4302540.7326185/94‑1 (MQ=60)

                                                                        ATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAA                       <  SRR4302540.8025059/94‑1 (MQ=60)

                                                                        ATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTCGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAA                       <  SRR4302540.9549767/94‑1 (MQ=60)

                                                                         TTTGACGACAATGCTGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAG                      <  SRR4302540.3545081/94‑1 (MQ=60)

                                                                          TTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGT                     <  SRR4302540.6805903/94‑1 (MQ=60)

                                                                           TGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTC                    <  SRR4302540.3395489/94‑1 (MQ=60)

                                                                           TGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTC                    <  SRR4302540.7524016/94‑1 (MQ=60)

                                                                           TGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTC                    <  SRR4302540.7609451/94‑1 (MQ=60)

                                                                             ACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGG                  >  SRR4302540.6899123/1‑94 (MQ=60)

                                                                             ACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGG                  <  SRR4302540.9421871/94‑1 (MQ=60)

                                                                              CGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGT                 <  SRR4302540.8546723/94‑1 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGTCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                >  SRR4302540.6119084/1‑94 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                <  SRR4302540.10027216/94‑1 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                >  SRR4302540.7694845/1‑94 (MQ=60)

                                                                               GACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTA                >  SRR4302540.7694847/1‑94 (MQ=60)

                                                                                ACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAA               >  SRR4302540.2375735/1‑94 (MQ=60)

                                                                                ACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAA               <  SRR4302540.4588285/94‑1 (MQ=60)

                                                                                ACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAA               >  SRR4302540.7973535/1‑94 (MQ=60)

                                                                                ACAATGCCGCGGTGTGGGGGCATCCTCTTTGGCTGGGTGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAA               <  SRR4302540.7845874/94‑1 (MQ=60)

                                                                                 CAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAG              <  SRR4302540.9014871/94‑1 (MQ=60)

                                                                                  AATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGT             >  SRR4302540.5890085/1‑94 (MQ=60)

                                                                                   ATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTC            <  SRR4302540.6387225/94‑1 (MQ=60)

                                                                                    TGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCG           >  SRR4302540.4710212/1‑94 (MQ=60)

                                                                                    TGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCG           <  SRR4302540.6614318/94‑1 (MQ=60)

                                                                                       CGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATT        >  SRR4302540.857686/1‑94 (MQ=60)

                                                                                       CGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATT        <  SRR4302540.3175459/94‑1 (MQ=60)

                                                                                       CGGGGGGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATT        <  SRR4302540.8173334/94‑1 (MQ=60)

                                                                                        GGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGACCTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTG       <  SRR4302540.5818827/94‑1 (MQ=60)

                                                                                        GGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTG       <  SRR4302540.7385375/94‑1 (MQ=60)

                                                                                           GTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGC    <  SRR4302540.9590456/94‑1 (MQ=60)

                                                                                            TGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGTTTGGGCA   >  SRR4302540.6802837/1‑94 (MQ=60)

                                                                                            TGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCA   >  SRR4302540.8447445/1‑94 (MQ=60)

                                                                                             GTTGGGGCATTCTCTTTGTCGGGGCGCTATTGGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  <  SRR4302540.1641131/94‑1 (MQ=60)

ATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAA  >  NC_000913/4060019‑4060205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`