Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,071,901	G→A	A197T (GCC→ACC)	yihV →	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,071,901	0	G	A	99.4%	1267.9 / ‑4.2	356	A197T (GCC→ACC)	yihV	putative kinase
Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (184/170); total (184/172)
Fisher's exact test for biased strand distribution p-value = 2.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01

Only 100 of 361 total aligned reads displayed.

CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT  >  NC_000913/4071811‑4071990

ccgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAcc                                                                                         >  2:3354265/1‑93 (MQ=255)

ccgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAcc                                                                                         <  2:5297533/93‑1 (MQ=255)

 cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa                                                                                        <  1:1147210/93‑1 (MQ=255)

 cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa                                                                                        <  2:5397470/93‑1 (MQ=255)

 cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa                                                                                        <  2:8651179/93‑1 (MQ=255)

  gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg                                                                                       <  2:1552752/93‑1 (MQ=255)

  gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg                                                                                       <  2:2702557/93‑1 (MQ=255)

   cAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGt                                                                                      >  2:3242165/1‑93 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                     <  1:5723780/93‑1 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                     >  1:5369890/1‑93 (MQ=255)

    aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTGTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg                                                                                     <  1:7325414/93‑1 (MQ=255)

     ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc                                                                                    <  1:2881137/93‑1 (MQ=255)

      gATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcg                                                                                   >  1:3054189/1‑93 (MQ=255)

      gATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcg                                                                                   <  2:9162994/93‑1 (MQ=255)

       atatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcgc                                                                                  >  2:8171758/1‑93 (MQ=255)

        tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt                                                                                 >  1:4927318/1‑93 (MQ=255)

        tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt                                                                                 >  2:9526367/1‑93 (MQ=255)

         atCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTa                                                                                <  2:1230257/93‑1 (MQ=255)

         atCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTa                                                                                >  2:4976714/1‑93 (MQ=255)

            aGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaaa                                                                             <  1:7957883/93‑1 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                            >  2:7871469/1‑93 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                            <  2:3701466/93‑1 (MQ=255)

             gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTCAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc                                                                            <  1:1802053/93‑1 (MQ=255)

               gAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAg                                                                          >  1:7243478/1‑93 (MQ=255)

                aGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAgg                                                                         <  2:9377701/93‑1 (MQ=255)

                 gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc                                                                        >  2:5835520/1‑93 (MQ=255)

                   tggtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGcac                                                                      <  2:4865673/93‑1 (MQ=255)

                   tggtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGcac                                                                      >  2:8943524/1‑93 (MQ=255)

                    ggtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGcaca                                                                     <  2:7443984/93‑1 (MQ=255)

                    ggtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGGGCGCTAAAACAGGcaca                                                                     >  2:2496641/1‑93 (MQ=255)

                      tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGCAAGAGATGAACAGTGCGCTAACACAGGCACaaa                                                                   >  2:7062843/1‑93 (MQ=255)

                      tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa                                                                   <  2:9319788/93‑1 (MQ=255)

                       ggCATTAAGCGATCACGCGGCCTTTTCAGAACCAGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAc                                                                  <  1:7138649/93‑1 (MQ=255)

                            tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca                                                             >  1:6064347/1‑93 (MQ=255)

                             aaGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTcac                                                            <  1:7744169/93‑1 (MQ=255)

                             aaGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTcac                                                            >  2:2238266/1‑93 (MQ=255)

                             aaGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTcac                                                            <  2:6321004/93‑1 (MQ=255)

                                cGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaaa                                                         <  2:4293504/93‑1 (MQ=255)

                                cGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaaa                                                         <  1:1587002/93‑1 (MQ=255)

                                cGATCACGCGGCCTTGTCAGAACCGGGTCTGGCGCGCTTACCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACaaa                                                         <  1:6440312/93‑1 (MQ=255)

                                 gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt                                                        >  1:6656338/1‑93 (MQ=255)

                                  aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAGGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg                                                       >  2:3540557/1‑93 (MQ=255)

                                  aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg                                                       <  2:7657517/93‑1 (MQ=255)

                                  aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg                                                       >  1:9109474/1‑93 (MQ=255)

                                       gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt                                                  >  1:6771923/1‑93 (MQ=255)

                                        cgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATg                                                 >  1:9672007/1‑93 (MQ=255)

                                         ggCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGt                                                >  1:8656947/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                               >  2:6057307/1‑93 (MQ=255)

                                          gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc                                               >  2:189916/1‑93 (MQ=255)

                                           ccTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCt                                              >  1:3718270/1‑93 (MQ=255)

                                            cTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTa                                             <  1:463408/93‑1 (MQ=255)

                                             ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCGGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt                                            >  1:5273152/1‑93 (MQ=255)

                                             ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt                                            <  2:9771762/93‑1 (MQ=255)

                                             ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt                                            >  2:8021576/1‑93 (MQ=255)

                                             ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt                                            >  2:8425541/1‑93 (MQ=255)

                                              tttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtg                                           >  2:1305190/1‑93 (MQ=255)

                                              tttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtg                                           <  1:7561427/93‑1 (MQ=255)

                                                 cAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGa                                        <  2:8063724/93‑1 (MQ=255)

                                                    aaCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAccc                                     <  2:4140524/93‑1 (MQ=255)

                                                     aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAcccg                                    >  1:8427524/1‑92 (MQ=255)

                                                      ccGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAg                                   <  1:8024941/93‑1 (MQ=255)

                                                       cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg                                  <  2:4029344/93‑1 (MQ=255)

                                                       cGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgg                                  <  2:83169/93‑1 (MQ=255)

                                                        gggTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAggg                                 <  1:2037235/93‑1 (MQ=255)

                                                        gggTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAggg                                 <  2:6907532/93‑1 (MQ=255)

                                                          gTCTGGCGCGCTTAACGGGCGTAAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAgggaa                               <  1:8946140/93‑3 (MQ=255)

                                                             tGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGGAgcg                            >  1:2243005/1‑93 (MQ=255)

                                                              ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc                           <  1:3314636/93‑1 (MQ=255)

                                                              ggCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcgc                           <  2:6967585/93‑1 (MQ=255)

                                                               gcgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCa                          <  2:6472174/93‑1 (MQ=255)

                                                                 gcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAgg                        >  1:9651003/1‑93 (MQ=255)

                                                                  cgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGc                       <  2:8649394/93‑1 (MQ=255)

                                                                  cgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGc                       <  2:9639082/93‑1 (MQ=255)

                                                                   gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCt                      >  1:3853419/1‑93 (MQ=255)

                                                                    cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg                     <  2:980908/93‑1 (MQ=255)

                                                                     ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc                    <  2:7579273/93‑1 (MQ=255)

                                                                      tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg                   <  1:766590/93‑1 (MQ=255)

                                                                       aaCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGa                  <  1:8728404/93‑1 (MQ=255)

                                                                        aCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAc                 <  2:1400613/93‑1 (MQ=255)

                                                                          gggCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActg               <  1:354359/93‑1 (MQ=255)

                                                                            gCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggc             >  2:8715397/1‑93 (MQ=255)

                                                                               tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg          >  1:6222695/1‑93 (MQ=255)

                                                                               tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg          >  1:10022314/1‑93 (MQ=255)

                                                                               tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg          >  2:2352994/1‑93 (MQ=255)

                                                                               tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg          <  1:6805047/93‑1 (MQ=255)

                                                                                gAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGa         >  1:4462845/1‑93 (MQ=255)

                                                                                gAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGa         >  2:6781880/1‑93 (MQ=255)

                                                                                gAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGa         >  2:3906546/1‑93 (MQ=255)

                                                                                 aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa        >  1:4968351/1‑93 (MQ=255)

                                                                                 aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa        >  2:4564679/1‑93 (MQ=255)

                                                                                 aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa        >  2:2413576/1‑93 (MQ=255)

                                                                                  aaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaa       >  1:4145011/1‑93 (MQ=255)

                                                                                   agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa      <  1:5903033/93‑1 (MQ=255)

                                                                                   agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa      <  1:9369053/93‑1 (MQ=255)

                                                                                   agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa      >  1:1434515/1‑93 (MQ=255)

                                                                                    gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt     <  2:4325454/93‑1 (MQ=255)

                                                                                    gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt     >  2:7313583/1‑93 (MQ=255)

                                                                                      gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGACAAtgg   >  1:6270540/1‑93 (MQ=255)

                                                                                      gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg   <  1:2451679/93‑1 (MQ=255)

                                                                                      gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg   >  2:2127737/1‑93 (MQ=255)

CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT  >  NC_000913/4071811‑4071990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  NC_000913/4071808‑4071994

ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGA                                                                                               <  SRR4302540.3857344/94‑1 (MQ=60)

 CGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAC                                                                                              <  SRR4302540.6675970/94‑1 (MQ=60)

  GCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACC                                                                                             >  SRR4302540.1894549/1‑94 (MQ=60)

    CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           <  SRR4302540.1038188/94‑1 (MQ=60)

    CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           <  SRR4302540.1159179/94‑1 (MQ=60)

    CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           <  SRR4302540.7406017/94‑1 (MQ=60)

    CGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAG                                                                                           >  SRR4302540.9460158/1‑94 (MQ=60)

     GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          >  SRR4302540.6943820/1‑94 (MQ=60)

     GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT                                                                                          >  SRR4302540.8867359/1‑94 (MQ=60)

      CAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTG                                                                                         >  SRR4302540.5428906/1‑94 (MQ=60)

      CAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTG                                                                                         <  SRR4302540.7934577/94‑1 (MQ=60)

       AGGATATCAGTGAGCTGGTGGCATTAAGCGATTACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        >  SRR4302540.8869588/1‑94 (MQ=60)

       AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        <  SRR4302540.5786787/94‑1 (MQ=60)

       AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        <  SRR4302540.7407207/94‑1 (MQ=60)

       AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        <  SRR4302540.6855485/94‑1 (MQ=60)

       AGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTGTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGC                                                                                        <  SRR4302540.7407208/94‑1 (MQ=60)

        GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG                                                                                       <  SRR4302540.8473447/94‑1 (MQ=60)

        GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG                                                                                       >  SRR4302540.3087701/1‑94 (MQ=60)

        GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG                                                                                       <  SRR4302540.8473448/94‑1 (MQ=60)

        GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG                                                                                       <  SRR4302540.2912482/94‑1 (MQ=60)

         GATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGC                                                                                      >  SRR4302540.177479/1‑94 (MQ=60)

         GATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGC                                                                                      <  SRR4302540.4987709/94‑1 (MQ=60)

         GATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGC                                                                                      >  SRR4302540.7339758/1‑94 (MQ=60)

         GATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAACAGATGACCAGTGCGC                                                                                      >  SRR4302540.9176608/1‑94 (MQ=60)

          ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT                                                                                     >  SRR4302540.6824746/1‑94 (MQ=60)

          ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT                                                                                     >  SRR4302540.4980429/1‑94 (MQ=60)

          ATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCT                                                                                     <  SRR4302540.2275356/94‑1 (MQ=60)

            ATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAA                                                                                   >  SRR4302540.5894288/1‑94 (MQ=60)

            ATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAA                                                                                   <  SRR4302540.1748225/94‑1 (MQ=60)

              CAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAA                                                                                 >  SRR4302540.1910611/1‑94 (MQ=60)

               AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                >  SRR4302540.6330084/1‑94 (MQ=60)

               AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                <  SRR4302540.685896/94‑1 (MQ=60)

               AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                <  SRR4302540.6549516/94‑1 (MQ=60)

               AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                <  SRR4302540.8050639/94‑1 (MQ=60)

               AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC                                                                                <  SRR4302540.8168921/94‑1 (MQ=60)

                GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA                                                                               >  SRR4302540.7666543/1‑94 (MQ=60)

                GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTCAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA                                                                               <  SRR4302540.1821676/94‑1 (MQ=60)

                 TGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG                                                                              >  SRR4302540.7324282/1‑94 (MQ=60)

                  GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG                                                                             <  SRR4302540.4568202/94‑1 (MQ=60)

                  GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG                                                                             <  SRR4302540.6084489/94‑1 (MQ=60)

                  GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG                                                                             <  SRR4302540.9783087/94‑1 (MQ=60)

                   AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC                                                                            >  SRR4302540.6535562/1‑94 (MQ=60)

                   AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC                                                                            <  SRR4302540.4566687/94‑1 (MQ=60)

                    GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA                                                                           <  SRR4302540.9514622/94‑1 (MQ=60)

                     CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC                                                                          >  SRR4302540.1525636/1‑94 (MQ=60)

                     CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC                                                                          >  SRR4302540.9470067/1‑94 (MQ=60)

                     CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAAAGGCAC                                                                          >  SRR4302540.1525635/1‑94 (MQ=60)

                      TGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACA                                                                         >  SRR4302540.4353965/1‑94 (MQ=60)

                      TGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACA                                                                         <  SRR4302540.9770323/94‑1 (MQ=60)

                       GGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAA                                                                        >  SRR4302540.7482386/1‑94 (MQ=60)

                        GTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAA                                                                       >  SRR4302540.506424/1‑94 (MQ=60)

                         TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC                                                                      >  SRR4302540.46898/1‑94 (MQ=60)

                         TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC                                                                      <  SRR4302540.10161187/94‑1 (MQ=60)

                          GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG                                                                     >  SRR4302540.373783/1‑94 (MQ=60)

                          GGCATTAAGCGATCACGCGGCCTTTTCAGAACCAGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG                                                                     <  SRR4302540.7218176/94‑1 (MQ=60)

                           GCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGC                                                                    <  SRR4302540.6898597/94‑1 (MQ=60)

                             ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTCAAACAGGCACAAACGCTC                                                                  >  SRR4302540.8851969/1‑94 (MQ=60)

                             ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC                                                                  >  SRR4302540.9390824/1‑94 (MQ=60)

                              TTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCA                                                                 >  SRR4302540.6131762/1‑94 (MQ=60)

                               TAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAC                                                                >  SRR4302540.6454268/1‑94 (MQ=60)

                                AAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACA                                                               >  SRR4302540.2136382/1‑94 (MQ=60)

                                AAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACA                                                               <  SRR4302540.7834587/94‑1 (MQ=60)

                                AAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACA                                                               <  SRR4302540.7834588/94‑1 (MQ=60)

                                  GCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACACACGCTCACAAA                                                             >  SRR4302540.9768526/1‑94 (MQ=60)

                                   CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            >  SRR4302540.6729946/1‑94 (MQ=60)

                                   CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            >  SRR4302540.4161652/1‑94 (MQ=60)

                                   CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            >  SRR4302540.7552898/1‑94 (MQ=60)

                                   CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            <  SRR4302540.1604335/94‑1 (MQ=60)

                                   CGATCACGCGGCCTTGTCAGAACCGGGTCTGGCGCGCTTACCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT                                                            <  SRR4302540.6511994/94‑1 (MQ=60)

                                    GATCACGCGGCTTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           <  SRR4302540.6119498/94‑1 (MQ=60)

                                    GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG                                                           >  SRR4302540.9218950/1‑94 (MQ=60)

                                     ATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGG                                                          <  SRR4302540.2285218/94‑1 (MQ=60)

                                      TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT                                                         <  SRR4302540.5023499/94‑1 (MQ=60)

                                       CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGGTGACCAGTGCGCTAAAACAGACACAAACGCTCACAAATGGTC                                                        >  SRR4302540.9627350/1‑94 (MQ=60)

                                       CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC                                                        <  SRR4302540.4792990/94‑1 (MQ=60)

                                         CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      >  SRR4302540.7751665/1‑94 (MQ=60)

                                         CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      <  SRR4302540.4026573/94‑1 (MQ=60)

                                         CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT                                                      >  SRR4302540.6846763/1‑94 (MQ=60)

                                          GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG                                                     <  SRR4302540.9829361/94‑1 (MQ=60)

                                          GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG                                                     >  SRR4302540.9785828/1‑94 (MQ=60)

                                           CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT                                                    <  SRR4302540.7532534/94‑1 (MQ=60)

                                           CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT                                                    >  SRR4302540.8757510/1‑94 (MQ=60)

                                            GGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTC                                                   >  SRR4302540.5910830/1‑94 (MQ=60)

                                             GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT                                                  >  SRR4302540.3758841/1‑94 (MQ=60)

                                             GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT                                                  <  SRR4302540.2735004/94‑1 (MQ=60)

                                              CCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTT                                                 >  SRR4302540.8566412/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCGGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302540.5330711/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTACAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302540.4075399/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302540.10083591/94‑1 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302540.645382/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302540.7994806/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302540.6543213/94‑1 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                >  SRR4302540.7802276/1‑94 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302540.468354/94‑1 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302540.5393411/94‑1 (MQ=60)

                                               CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT                                                <  SRR4302540.2409728/94‑1 (MQ=60)

                                                TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG                                               <  SRR4302540.8104226/94‑1 (MQ=60)

                                                 TTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGT                                              <  SRR4302540.7646238/94‑1 (MQ=60)

                                                     AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC                                          >  SRR4302540.1792128/1‑94 (MQ=60)

                                                     AGAACCGGGCCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACACTCACAAATGGACATCTCTATGTGACC                                          >  SRR4302540.2995926/1‑94 (MQ=60)

                                                       AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCG                                        >  SRR4302540.8525361/1‑94 (MQ=60)

                                                        ACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAG                                       <  SRR4302540.6828276/94‑1 (MQ=60)

                                                         CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG                                      <  SRR4302540.8118268/94‑1 (MQ=60)

                                                           GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    <  SRR4302540.2059199/94‑1 (MQ=60)

                                                           GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT                                    >  SRR4302540.2710264/1‑94 (MQ=60)

                                                             GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG                                  >  SRR4302540.6242927/1‑94 (MQ=60)

                                                             GTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAG                                  <  SRR4302540.6798458/94‑1 (MQ=60)

                                                             GTCTGGCGCGCTTAACGGGCGTAAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGAAG                                  <  SRR4302540.9051378/94‑1 (MQ=60)

                                                              TCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGC                                 <  SRR4302540.6966284/94‑1 (MQ=60)

                                                               CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG                                >  SRR4302540.3157348/1‑94 (MQ=60)

                                                               CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG                                >  SRR4302540.3059268/1‑94 (MQ=60)

                                                               CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGGAGCG                                >  SRR4302540.2267110/1‑94 (MQ=60)

                                                                TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC                               >  SRR4302540.5278491/1‑94 (MQ=60)

                                                                 GGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCA                              <  SRR4302540.3350967/94‑1 (MQ=60)

                                                                   CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG                            >  SRR4302540.9764643/1‑94 (MQ=60)

                                                                    GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC                           >  SRR4302540.9118913/1‑94 (MQ=60)

                                                                    GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC                           <  SRR4302540.809227/94‑1 (MQ=60)

                                                                    GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC                           <  SRR4302540.3650678/94‑1 (MQ=60)

                                                                    GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC                           >  SRR4302540.2922900/1‑94 (MQ=60)

                                                                     CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          >  SRR4302540.3895314/1‑94 (MQ=60)

                                                                     CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          <  SRR4302540.8768872/94‑1 (MQ=60)

                                                                     CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT                          <  SRR4302540.8816854/94‑1 (MQ=60)

                                                                      GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG                         <  SRR4302540.8790534/94‑1 (MQ=60)

                                                                      GCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTG                         >  SRR4302540.3852283/1‑94 (MQ=60)

                                                                       CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC                        >  SRR4302540.10054431/1‑94 (MQ=60)

                                                                       CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC                        >  SRR4302540.7222393/1‑94 (MQ=60)

                                                                       CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC                        >  SRR4302540.8755771/1‑94 (MQ=60)

                                                                         TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGC                      >  SRR4302540.6114920/1‑94 (MQ=60)

                                                                         TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA                      <  SRR4302540.774755/94‑1 (MQ=60)

                                                                          AACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAC                     <  SRR4302540.8829762/94‑1 (MQ=60)

                                                                           ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT                    <  SRR4302540.449639/94‑1 (MQ=60)

                                                                           ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGAGTAGCGCAGGCTGCGACT                    >  SRR4302540.217378/1‑94 (MQ=60)

                                                                            CGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTG                   >  SRR4302540.3495768/1‑94 (MQ=60)

                                                                            CGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTG                   <  SRR4302540.3097948/94‑1 (MQ=60)

                                                                             GGGCGTGAAAGGGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  >  SRR4302540.5395150/1‑94 (MQ=60)

                                                                             GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  <  SRR4302540.120814/94‑1 (MQ=60)

                                                                             GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  >  SRR4302540.1204659/1‑94 (MQ=60)

                                                                             GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  <  SRR4302540.357993/94‑1 (MQ=60)

                                                                             GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG                  <  SRR4302540.81041/94‑1 (MQ=60)

                                                                             GGGCGTGAAAGAGATGACCAGCGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCACGGTAGCGCAGGCTGCGACTGG                  >  SRR4302540.4986270/1‑94 (MQ=60)

                                                                                CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG               >  SRR4302540.1879614/1‑94 (MQ=60)

                                                                                CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG               <  SRR4302540.4775535/94‑1 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.10138944/1‑94 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.7774867/1‑94 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.5594520/1‑94 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.6291915/1‑94 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.6333734/1‑94 (MQ=60)

                                                                                 GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG              >  SRR4302540.6333735/1‑94 (MQ=60)

                                                                                  TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             >  SRR4302540.5349631/1‑94 (MQ=60)

                                                                                  TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             >  SRR4302540.7271903/1‑94 (MQ=60)

                                                                                  TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             >  SRR4302540.4511222/1‑94 (MQ=60)

                                                                                  TGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGA             <  SRR4302540.6880345/94‑1 (MQ=60)

                                                                                   GAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAA            >  SRR4302540.5022100/1‑94 (MQ=60)

                                                                                   GAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAA            >  SRR4302540.1428383/1‑94 (MQ=60)

                                                                                    AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA           <  SRR4302540.3644073/94‑1 (MQ=60)

                                                                                    AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA           >  SRR4302540.4189869/1‑94 (MQ=60)

                                                                                     AAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAA          >  SRR4302540.1450067/1‑94 (MQ=60)

                                                                                      AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAgag         >  SRR4302540.3882147/1‑91 (MQ=60)

                                                                                      AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAT         <  SRR4302540.9480602/94‑1 (MQ=60)

                                                                                      AGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAT         <  SRR4302540.5968218/94‑1 (MQ=60)

                                                                                       GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG        <  SRR4302540.6142354/94‑1 (MQ=60)

                                                                                        AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGACAATGG       >  SRR4302540.6340305/1‑94 (MQ=60)

                                                                                        AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAACATGG       >  SRR4302540.5431941/1‑94 (MQ=60)

                                                                                        AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG       >  SRR4302540.3427104/1‑94 (MQ=60)

                                                                                        AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG       <  SRR4302540.5915445/94‑1 (MQ=60)

                                                                                         GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT      <  SRR4302540.2478077/94‑1 (MQ=60)

                                                                                         GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT      <  SRR4302540.3283161/94‑1 (MQ=60)

                                                                                          ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG     >  SRR4302540.4724602/1‑94 (MQ=60)

                                                                                          ATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTG     <  SRR4302540.4348827/94‑1 (MQ=60)

                                                                                           TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG    >  SRR4302540.8800623/1‑94 (MQ=60)

                                                                                           TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG    <  SRR4302540.3236826/94‑1 (MQ=60)

                                                                                           TGACCAGTGCGCTAAAACAGGCACAAAAGCTCACCAAGCGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG    <  SRR4302540.3236824/94‑1 (MQ=60)

                                                                                            GACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG   <  SRR4302540.5553652/94‑1 (MQ=60)

                                                                                            GACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG   >  SRR4302540.2716662/1‑94 (MQ=60)

                                                                                             ACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  SRR4302540.4452518/1‑94 (MQ=60)

                                                                                             ACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  SRR4302540.4370522/1‑94 (MQ=60)

ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGC  >  NC_000913/4071808‑4071994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`