Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,071,901 |
G→A |
A197T (GCC→ACC) |
yihV → |
putative kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,071,901 | 0 | G | A | 100.0%
| 806.8
/ NA
| 221 | A197T (GCC→ACC) | yihV | putative kinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (115/106); total (115/106) |
Only 100 of 225 total aligned reads displayed.
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG > NC_000913/4071811‑4071989
|
cgcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCa > 2:532431/1‑93 (MQ=255)
gcAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAg < 1:1753311/93‑1 (MQ=255)
cAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGt < 2:392592/93‑1 (MQ=255)
aGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTg > 2:6197503/1‑93 (MQ=255)
ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc > 2:4950637/1‑93 (MQ=255)
ggATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgc > 2:5271496/1‑93 (MQ=255)
gATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTgcg > 2:3564882/1‑93 (MQ=255)
tatCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCt > 2:586974/1‑93 (MQ=255)
atCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTa < 1:2286722/93‑1 (MQ=255)
tCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaa > 2:4155567/1‑93 (MQ=255)
cAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaa > 1:1942571/1‑93 (MQ=255)
cAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTaaa > 2:5356473/1‑93 (MQ=255)
gTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAc > 1:3648208/1‑93 (MQ=255)
tGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACa > 2:4649999/1‑93 (MQ=255)
gAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAg < 1:6278444/93‑1 (MQ=255)
gAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAg > 1:3239139/1‑93 (MQ=255)
gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc < 1:769414/93‑1 (MQ=255)
gCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGc > 1:1163928/1‑93 (MQ=255)
cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca < 1:4944718/93‑1 (MQ=255)
cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca > 1:5869533/1‑93 (MQ=255)
cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca < 1:1032036/93‑1 (MQ=255)
cTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGca < 1:2265181/93‑1 (MQ=255)
gtggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaa < 1:3721310/93‑1 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa < 2:5051328/93‑1 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa < 1:4388014/93‑1 (MQ=255)
tggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACaaa < 2:4018887/93‑1 (MQ=255)
ggCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAc < 1:398136/93‑1 (MQ=255)
gCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACg > 2:3473719/1‑93 (MQ=255)
cATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGc > 2:3187541/1‑93 (MQ=255)
aTTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCt > 2:4507458/1‑93 (MQ=255)
ttAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc > 1:351922/1‑93 (MQ=255)
ttAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTc > 1:3929483/1‑93 (MQ=255)
tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca < 1:2574/93‑1 (MQ=255)
tAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTca < 1:2765735/93‑1 (MQ=255)
tAAGCGATCACGCGGCCTTTTCAGAACCGGGCCTGGCGCGCTTAACGGGCGTGAAAGAGAGGACCAGTGCGCTAAAACAGGCACAAACGCTca > 2:3791265/1‑93 (MQ=255)
gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt > 1:263818/1‑93 (MQ=255)
gATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAt < 1:671016/93‑1 (MQ=255)
aTCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATg > 2:2032928/1‑93 (MQ=255)
tCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATgg < 1:1389491/93‑1 (MQ=255)
cACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGt > 1:6196021/1‑93 (MQ=255)
aCGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTc > 1:3858807/1‑93 (MQ=255)
aCGCGGCCTTTGCAGAGCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAAAAATGGTc < 2:2727986/93‑1 (MQ=255)
cgcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCa < 2:927718/93‑1 (MQ=255)
cgcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCa > 1:2886380/1‑93 (MQ=255)
cgcgCCTTTTTCAGAACGGGGTCTGGCGCGTTAAACGGGCGTGAAAGAGAGGCCCAGTGCGCAAAAACAGGCACAAACGCTCACAAATGGTCa < 2:4723758/93‑1 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt < 1:5848673/93‑1 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt < 2:3674904/93‑1 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt > 2:3826992/1‑93 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt < 2:4119204/93‑1 (MQ=255)
gcgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAt > 2:6080798/1‑93 (MQ=255)
cgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATg < 1:1701025/93‑1 (MQ=255)
cgGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATg > 2:1679246/1‑93 (MQ=255)
gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc > 2:2996523/1‑93 (MQ=255)
gCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTc > 2:2676935/1‑93 (MQ=255)
ccTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCTCAAACGCTCACAAATGGTCATGTCt > 1:6086625/1‑93 (MQ=255)
cTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTATAACAGGCACAAACGCTCACAAATGGTCATGTCTa > 1:4820487/1‑93 (MQ=255)
cTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTa > 2:154641/1‑93 (MQ=255)
cTTTTCAGAACCGGGTCTGGCGCGCTTAAAGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTa > 1:1556549/1‑93 (MQ=255)
ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt > 1:1208793/1‑93 (MQ=255)
ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt > 1:5919019/1‑93 (MQ=255)
ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt > 1:4535345/1‑93 (MQ=255)
ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAt > 2:2433908/1‑93 (MQ=255)
ttttCAGAACCGGGTCTGGCGCGCTTAACGGGCGGGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGCCATGTCTAt > 1:4073145/1‑93 (MQ=255)
tCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAtgtg < 1:2392813/93‑1 (MQ=255)
gAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAcc > 1:1880011/1‑93 (MQ=255)
aaCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTATATGTGAccc > 1:858299/1‑93 (MQ=255)
aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCa > 2:544600/1‑93 (MQ=255)
aCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCa > 2:5727401/1‑93 (MQ=255)
gggTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAggg < 1:5224070/93‑1 (MQ=255)
gTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTa > 2:4209228/1‑93 (MQ=255)
tGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAgcg > 2:701434/1‑93 (MQ=255)
gcgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCa > 2:613164/1‑93 (MQ=255)
cgcgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAg < 1:5732162/93‑1 (MQ=255)
cgcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGc > 1:2204313/1‑93 (MQ=255)
gcTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCt > 1:5420187/1‑93 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg > 2:6264263/1‑93 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg > 2:226845/1‑93 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg < 1:2027030/93‑1 (MQ=255)
cTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTg < 2:248921/93‑1 (MQ=255)
ttAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGc > 1:214137/1‑93 (MQ=255)
tAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCg < 1:5467275/93‑1 (MQ=255)
aaCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGa < 1:5616164/93‑1 (MQ=255)
aCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAc < 1:3084131/93‑1 (MQ=255)
aCGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAc < 1:2831742/93‑1 (MQ=255)
gggCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActg > 2:5582279/1‑93 (MQ=255)
ggCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActgg > 2:5519240/1‑93 (MQ=255)
gTGAAAGAGATGAGCAGTGCGCTAAAACAGGGACAAACGCTCACAAATGGTCATGGCTATGTGACCCAGGGTAGGGCAGGCTGCGActggctg > 2:108164/1‑93 (MQ=255)
gTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctg < 2:4459100/93‑1 (MQ=255)
tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg > 2:186753/1‑93 (MQ=255)
tGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGActggctgg > 1:5050773/1‑93 (MQ=255)
aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa > 2:1261392/1‑93 (MQ=255)
aaaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaa < 2:1843230/93‑1 (MQ=255)
aaGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaa > 1:1074676/1‑93 (MQ=255)
agagATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGaaaa < 2:2841474/93‑1 (MQ=255)
gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt < 1:3049395/93‑1 (MQ=255)
gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt < 2:3045735/93‑1 (MQ=255)
gagaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAACGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAt < 1:5794911/93‑1 (MQ=255)
agaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtg > 1:6025595/1‑93 (MQ=255)
gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg > 2:1578959/1‑93 (MQ=255)
gaTGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAAtgg > 2:2581349/1‑93 (MQ=255)
|
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG > NC_000913/4071811‑4071989
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG > NC_000913/4071808‑4071993
|
ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGAGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGA > SRR4302533.3398117/1‑94 (MQ=60)
CGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGAC > SRR4302533.3769630/1‑94 (MQ=60)
CCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCA > SRR4302533.5666392/1‑94 (MQ=60)
GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT > SRR4302533.4876936/1‑94 (MQ=60)
GCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGT < SRR4302533.1763991/94‑1 (MQ=60)
GGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCG > SRR4302533.5801711/1‑94 (MQ=60)
ATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAA < SRR4302533.2300876/94‑1 (MQ=60)
TCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAA > SRR4302533.1954421/1‑94 (MQ=60)
TCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAA < SRR4302533.5113756/94‑1 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC > SRR4302533.5867885/1‑94 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC < SRR4302533.1965869/94‑1 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC > SRR4302533.2430977/1‑94 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC > SRR4302533.4550928/1‑94 (MQ=60)
AGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAAC > SRR4302533.3670639/1‑94 (MQ=60)
GTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACA < SRR4302533.3796235/94‑1 (MQ=60)
TGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAG > SRR4302533.3259102/1‑94 (MQ=60)
GAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGG < SRR4302533.6315928/94‑1 (MQ=60)
AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC > SRR4302533.6313131/1‑94 (MQ=60)
AGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGC > SRR4302533.1170908/1‑94 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA < SRR4302533.773945/94‑1 (MQ=60)
GCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCA > SRR4302533.5905009/1‑94 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC < SRR4302533.4974646/94‑1 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC < SRR4302533.1038104/94‑1 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC < SRR4302533.2279197/94‑1 (MQ=60)
CTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCCGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCAC > SRR4302533.3411147/1‑94 (MQ=60)
TGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACA > SRR4302533.414019/1‑94 (MQ=60)
GTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAA < SRR4302533.3744149/94‑1 (MQ=60)
TGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAAC < SRR4302533.4414506/94‑1 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG > SRR4302533.820234/1‑94 (MQ=60)
GGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACG < SRR4302533.400541/94‑1 (MQ=60)
CATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCT < SRR4302533.1728052/94‑1 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302533.3953472/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302533.354069/1‑94 (MQ=60)
ATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTC > SRR4302533.109176/1‑94 (MQ=60)
TAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAC < SRR4302533.2593/94‑1 (MQ=60)
TAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCAC < SRR4302533.2782692/94‑1 (MQ=60)
AGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAA > SRR4302533.6253412/1‑94 (MQ=60)
CGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAAT > SRR4302533.265418/1‑94 (MQ=60)
GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG < SRR4302533.674979/94‑1 (MQ=60)
GATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATG < SRR4302533.320000/94‑1 (MQ=60)
TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT > SRR4302533.6233194/1‑94 (MQ=60)
TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGT < SRR4302533.1397861/94‑1 (MQ=60)
TCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGC > SRR4302533.1274772/1‑94 (MQ=60)
CACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTC > SRR4302533.3882367/1‑94 (MQ=60)
ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA < SRR4302533.5902628/94‑1 (MQ=60)
ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA > SRR4302533.2904130/1‑94 (MQ=60)
ACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCA < SRR4302533.997013/94‑1 (MQ=60)
CGCGGCCTTTTCAGACCCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT < SRR4302533.3524134/94‑1 (MQ=60)
CGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCAT < SRR4302533.4013661/94‑1 (MQ=60)
GCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATG < SRR4302533.5884031/94‑1 (MQ=60)
CGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGT < SRR4302533.1711334/94‑1 (MQ=60)
GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCTCAAACGCTCACAAATGGTCATGTCT > SRR4302533.6123422/1‑94 (MQ=60)
GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT < SRR4302533.5384791/94‑1 (MQ=60)
GCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCT < SRR4302533.5605524/94‑1 (MQ=60)
CCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTATAACAGGCACAAACGCTCACAAATGGTCATGTCTA > SRR4302533.4849696/1‑94 (MQ=60)
CCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTA < SRR4302533.5730697/94‑1 (MQ=60)
CCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTA > SRR4302533.617991/1‑94 (MQ=60)
CCTTTTCAGAACCGGGTCTGGCGCGCTTAAAGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTA > SRR4302533.1565919/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCCCAAACGCTCACAAATGGTCATGTCTAT > SRR4302533.1885202/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT > SRR4302533.4562806/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT < SRR4302533.4447229/94‑1 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT > SRR4302533.5954793/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT > SRR4302533.1210252/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT < SRR4302533.2302980/94‑1 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTAT > SRR4302533.1216053/1‑94 (MQ=60)
CTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGGGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGCCATGTCTAT > SRR4302533.4097940/1‑94 (MQ=60)
TTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATG < SRR4302533.2853197/94‑1 (MQ=60)
TTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTG > SRR4302533.3905146/1‑94 (MQ=60)
TCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGA < SRR4302533.2407583/94‑1 (MQ=60)
CAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAC < SRR4302533.2828673/94‑1 (MQ=60)
CAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGAC > SRR4302533.5475381/1‑94 (MQ=60)
AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC > SRR4302533.1891463/1‑94 (MQ=60)
AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC < SRR4302533.2278940/94‑1 (MQ=60)
AGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACC < SRR4302533.3543835/94‑1 (MQ=60)
GAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTATATGTGACCC > SRR4302533.863326/1‑94 (MQ=60)
AACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCA < SRR4302533.219063/94‑1 (MQ=60)
CCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGG < SRR4302533.6093662/94‑1 (MQ=60)
CGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGG < SRR4302533.205703/94‑1 (MQ=60)
GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT < SRR4302533.5255496/94‑1 (MQ=60)
GGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGT > SRR4302533.2861244/1‑94 (MQ=60)
GGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTA < SRR4302533.1079618/94‑1 (MQ=60)
GGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTA < SRR4302533.3974071/94‑1 (MQ=60)
TCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGC > SRR4302533.1830758/1‑94 (MQ=60)
TCTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGC < SRR4302533.3076980/94‑1 (MQ=60)
CTGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCG < SRR4302533.2443718/94‑1 (MQ=60)
TGGCGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGC > SRR4302533.1525080/1‑94 (MQ=60)
CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG > SRR4302533.4838922/1‑94 (MQ=60)
CGCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGG < SRR4302533.5766767/94‑1 (MQ=60)
GCGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGC > SRR4302533.2217899/1‑94 (MQ=60)
CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT < SRR4302533.4988565/94‑1 (MQ=60)
CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT < SRR4302533.667944/94‑1 (MQ=60)
CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT < SRR4302533.1954032/94‑1 (MQ=60)
CGCTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCT > SRR4302533.5452802/1‑94 (MQ=60)
CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC > SRR4302533.215485/1‑94 (MQ=60)
CTTAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGC < SRR4302533.2039545/94‑1 (MQ=60)
TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA < SRR4302533.5500227/94‑1 (MQ=60)
TAACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGA > SRR4302533.5950730/1‑94 (MQ=60)
AACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAC < SRR4302533.5650114/94‑1 (MQ=60)
AACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGAC < SRR4302533.2207261/94‑1 (MQ=60)
ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT < SRR4302533.3103092/94‑1 (MQ=60)
ACGGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACT < SRR4302533.2849165/94‑1 (MQ=60)
GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGG > SRR4302533.3739401/1‑94 (MQ=60)
GGGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAAGCTGCGACTGG > SRR4302533.723331/1‑94 (MQ=60)
GGCGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGC > SRR4302533.602450/1‑94 (MQ=60)
CGTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTG > SRR4302533.272599/1‑94 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG < SRR4302533.1653326/94‑1 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG > SRR4302533.3910455/1‑94 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG < SRR4302533.5910347/94‑1 (MQ=60)
GTGAAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGG > SRR4302533.5081317/1‑94 (MQ=60)
AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA > SRR4302533.1081011/1‑94 (MQ=60)
AAAGAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAA > SRR4302533.2292629/1‑94 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG > SRR4302533.6062107/1‑94 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302533.2623985/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302533.3068059/94‑1 (MQ=60)
GAGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAACGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATG < SRR4302533.5829920/94‑1 (MQ=60)
AGATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGG < SRR4302533.5195415/94‑1 (MQ=60)
GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGT < SRR4302533.2967949/94‑1 (MQ=60)
GATGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGG > SRR4302533.1322103/1‑94 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG < SRR4302533.3737745/94‑1 (MQ=60)
TGACCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGG < SRR4302533.1410626/94‑1 (MQ=60)
GACCAGTGCGCTAAAACAGGCACAATCGCTCACAGATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG < SRR4302533.1883791/94‑1 (MQ=60)
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ACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGG > NC_000913/4071808‑4071993
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
