Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,108,133	A→G	G208G (GGA→GGG)	cdh →	CDP‑diacylglycerol phosphotidylhydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,108,133	0	A	G	100.0%	1343.6 / NA	414	G208G (GGA→GGG)	cdh	CDP‑diacylglycerol phosphotidylhydrolase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (223/191); total (223/191)

Only 100 of 433 total aligned reads displayed.

GCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC  >  NC_000913/4108044‑4108222

 cgcgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCt                                                                                       <  1:5551999/93‑1 (MQ=255)

  gcgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTa                                                                                      >  1:1134228/1‑93 (MQ=255)

   cgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGCAGTACCTGAGGCGCGGGAACATATGGGGCGCTAc                                                                                     >  1:8795711/1‑93 (MQ=255)

   cgTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAc                                                                                     <  2:5366121/93‑1 (MQ=255)

    gTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACg                                                                                    <  2:9242286/93‑1 (MQ=255)

    gTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACg                                                                                    <  1:6216794/93‑1 (MQ=255)

       gggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGc                                                                                 >  2:6657738/1‑93 (MQ=255)

        ggTAGCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCt                                                                                >  2:6487419/1‑93 (MQ=255)

        ggTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCt                                                                                >  1:996140/1‑93 (MQ=255)

         gTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTg                                                                               >  2:1022870/1‑93 (MQ=255)

         gTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTg                                                                               >  2:4843882/1‑93 (MQ=255)

          tAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTgg                                                                              <  2:9127872/93‑1 (MQ=255)

           aaCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGc                                                                             <  2:8030657/93‑1 (MQ=255)

            aCGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCg                                                                            >  1:2517335/1‑93 (MQ=255)

              ggAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          <  1:10043742/93‑1 (MQ=255)

              ggAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGAt                                                                          <  2:5003939/93‑1 (MQ=255)

               gAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATg                                                                         <  2:8895060/93‑1 (MQ=255)

                aaaGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATgg                                                                        <  1:7080413/93‑1 (MQ=255)

                 aaGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGt                                                                       <  2:253923/93‑1 (MQ=255)

                  aGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTa                                                                      <  2:4221236/93‑1 (MQ=255)

                   gCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAc                                                                     <  1:362551/93‑1 (MQ=255)

                     gAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACgg                                                                   <  2:7514889/93‑1 (MQ=255)

                        cTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCag                                                                >  2:8558012/1‑93 (MQ=255)

                        cTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCag                                                                >  1:6296225/1‑93 (MQ=255)

                           gTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGCACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGt                                                             >  1:3063864/1‑93 (MQ=255)

                              cAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAt                                                          <  1:4963399/93‑1 (MQ=255)

                              cAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAt                                                          <  1:157275/93‑1 (MQ=255)

                              cAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGAt                                                          <  1:6552572/93‑1 (MQ=255)

                               aaCGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATa                                                         <  1:4550760/93‑1 (MQ=255)

                               aaCGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATa                                                         <  2:5998310/93‑1 (MQ=255)

                               aaCGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGACAGAGTGATa                                                         >  1:9409307/1‑93 (MQ=255)

                                aCGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATaa                                                        >  2:4605760/1‑93 (MQ=255)

                                     gCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAt                                                   >  2:1193638/1‑93 (MQ=255)

                                     gCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAt                                                   >  1:3949530/1‑93 (MQ=255)

                                      cccATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAtt                                                  >  2:7701977/1‑93 (MQ=255)

                                       ccATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAttt                                                 >  1:5737959/1‑93 (MQ=255)

                                        cATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTg                                                >  2:3403431/1‑93 (MQ=255)

                                        cATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTg                                                >  2:3031983/1‑93 (MQ=255)

                                         aTTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGt                                               <  1:4699006/93‑1 (MQ=255)

                                         aTTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGt                                               <  2:372792/93‑1 (MQ=255)

                                         aTTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGt                                               <  1:8196002/93‑1 (MQ=255)

                                         aTTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGt                                               <  2:6944879/93‑1 (MQ=255)

                                          tttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGGGGGAAAACTCATTTgca                                              >  1:7915385/1‑91 (MQ=255)

                                          tttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGtt                                              >  2:2270825/1‑92 (MQ=255)

                                          tttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTa                                              >  1:7782458/1‑93 (MQ=255)

                                          tttAGGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTa                                              <  2:7795412/93‑1 (MQ=255)

                                           ttATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAt                                             >  2:2712627/1‑93 (MQ=255)

                                            tATGATGCTGGCAGAAGAAGTACATGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAtt                                            <  2:6900150/93‑1 (MQ=255)

                                             atgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTg                                           >  2:3227846/1‑93 (MQ=255)

                                              tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          <  1:3347427/93‑1 (MQ=255)

                                              tgatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGc                                          >  1:3866369/1‑93 (MQ=255)

                                               gatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCt                                         <  2:161476/93‑1 (MQ=255)

                                               gatgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCt                                         >  1:4290522/1‑93 (MQ=255)

                                                atgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTg                                        >  1:9705240/1‑93 (MQ=255)

                                                atgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTg                                        >  1:9835108/1‑93 (MQ=255)

                                                atgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTg                                        <  1:3399962/93‑1 (MQ=255)

                                                atgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTg                                        <  1:6862786/93‑1 (MQ=255)

                                                 tgCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTgg                                       <  2:187814/93‑1 (MQ=255)

                                                    tGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGa                                    <  1:8668359/93‑1 (MQ=255)

                                                        agaagaAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGAcaca                                >  1:9214687/1‑93 (MQ=255)

                                                        agaagaAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGAcaca                                >  1:7229567/1‑93 (MQ=255)

                                                         gaagaaGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACaa                               >  1:5419491/1‑93 (MQ=255)

                                                          aagaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAc                              >  1:7587371/1‑93 (MQ=255)

                                                           agaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACg                             >  1:713387/1‑93 (MQ=255)

                                                            gaagTACCTGAGGCGCGGGCACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGa                            >  2:9729221/1‑93 (MQ=255)

                                                            gaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGa                            >  2:2438894/1‑93 (MQ=255)

                                                            gaagTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGa                            >  2:7233634/1‑93 (MQ=255)

                                                              agTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGaaa                          >  1:9279472/1‑93 (MQ=255)

                                                              agTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGaaa                          >  1:1736334/1‑93 (MQ=255)

                                                                tACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATc                        >  1:268588/1‑93 (MQ=255)

                                                                tACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGGGATAACTCATTTGTATTGCTGGCCACACAACGAAATc                        >  2:5465047/1‑93 (MQ=255)

                                                                  ccTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTa                      <  2:9666931/93‑1 (MQ=255)

                                                                   cTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAc                     <  1:3814482/93‑1 (MQ=255)

                                                                   cTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAc                     <  1:6113245/93‑1 (MQ=255)

                                                                   cTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAc                     <  1:6631984/93‑1 (MQ=255)

                                                                   cTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAc                     >  1:7433352/1‑93 (MQ=255)

                                                                    tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGTTGGTACGGCAGAGTGAGAACTCAGTTGTATTGCTGGCGACACAACGAAATCTACt                    >  1:2913907/1‑93 (MQ=255)

                                                                    tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    >  2:5176907/1‑93 (MQ=255)

                                                                    tGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACt                    >  1:3173005/1‑93 (MQ=255)

                                                                      aGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGa                  >  1:8019354/1‑93 (MQ=255)

                                                                       ggCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAc                 <  1:8455401/93‑1 (MQ=255)

                                                                           cgGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTATTGACGttt             >  2:8701629/1‑93 (MQ=255)

                                                                           cgGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCtt             >  2:397936/1‑93 (MQ=255)

                                                                            gggAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTa            <  2:3557833/93‑1 (MQ=255)

                                                                             ggAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTaa           >  2:9545663/1‑93 (MQ=255)

                                                                              gAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAc          >  1:1894492/1‑93 (MQ=255)

                                                                              gAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAc          <  1:2028519/93‑1 (MQ=255)

                                                                              gAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAc          <  1:5118383/93‑1 (MQ=255)

                                                                              gAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAc          <  2:4769417/93‑1 (MQ=255)

                                                                                aCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCg        >  2:2939058/1‑93 (MQ=255)

                                                                                aCATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCg        <  2:6231666/93‑1 (MQ=255)

                                                                                 cATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGt       >  2:6048933/1‑93 (MQ=255)

                                                                                 cATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGt       <  1:5834346/93‑1 (MQ=255)

                                                                                  atatGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTg      >  1:8599799/1‑93 (MQ=255)

                                                                                   tatGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGc     >  2:3821020/1‑93 (MQ=255)

                                                                                    atGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCt    <  1:2304932/93‑1 (MQ=255)

                                                                                     tGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCtt   <  1:4097023/93‑1 (MQ=255)

                                                                                      ggggCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTc  <  2:5874002/93‑1 (MQ=255)

                                                                                      ggggCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTc  >  2:4469285/1‑93 (MQ=255)

                                                                                      ggggCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTc  <  2:1813915/93‑1 (MQ=255)

GCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC  >  NC_000913/4108044‑4108222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 243 total aligned reads displayed.

CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  >  NC_000913/4108040‑4108226

CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGG                                                                                               >  SRR4302540.4439136/1‑94 (MQ=60)

 CTGGCGCGTCGGGTAACGGAAATCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGC                                                                                              >  SRR4302540.8658343/1‑94 (MQ=60)

 CTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGC                                                                                              >  SRR4302540.918421/1‑94 (MQ=60)

     CGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTA                                                                                          <  SRR4302540.5613158/94‑1 (MQ=60)

     CGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTA                                                                                          <  SRR4302540.7053983/94‑1 (MQ=60)

     CGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTA                                                                                          >  SRR4302540.1146050/1‑94 (MQ=60)

      GCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGCAGTACCTGAGGCGCGGGAACATATGGGGCGCTAC                                                                                         >  SRR4302540.8897426/1‑94 (MQ=60)

      GCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTAC                                                                                         <  SRR4302540.3234344/94‑1 (MQ=60)

       CGTCGGGTAACGGAAAGCGAACTGGTACAACGAAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACG                                                                                        >  SRR4302540.6881523/1‑94 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       >  SRR4302540.7023487/1‑94 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       >  SRR4302540.8472294/1‑94 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       <  SRR4302540.6285961/94‑1 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       <  SRR4302540.5988091/94‑1 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       >  SRR4302540.9928296/1‑94 (MQ=60)

        GTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGG                                                                                       >  SRR4302540.5931582/1‑94 (MQ=60)

           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCT                                                                                    >  SRR4302540.2538380/1‑94 (MQ=60)

           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCT                                                                                    >  SRR4302540.1006281/1‑94 (MQ=60)

           GGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCG                                                                                    >  SRR4302540.434831/1‑94 (MQ=60)

            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   >  SRR4302540.1164985/1‑94 (MQ=60)

            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   <  SRR4302540.3984286/94‑1 (MQ=60)

            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   <  SRR4302540.500749/94‑1 (MQ=60)

            GGTAACGGAAAGCGAACTGGTACAACGCAGCCCATGTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTG                                                                                   <  SRR4302540.3111850/94‑1 (MQ=60)

             GTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGG                                                                                  >  SRR4302540.6179976/1‑94 (MQ=60)

              TAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 >  SRR4302540.1066519/1‑94 (MQ=60)

              TAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGC                                                                                 <  SRR4302540.4959421/94‑1 (MQ=60)

               AACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCG                                                                                >  SRR4302540.2544524/1‑94 (MQ=60)

               AACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCG                                                                                >  SRR4302540.734176/1‑94 (MQ=60)

                  GGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATG                                                                             >  SRR4302540.4009278/1‑94 (MQ=60)

                   GAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            >  SRR4302540.8387517/1‑94 (MQ=60)

                   GAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGG                                                                            >  SRR4302540.5073392/1‑94 (MQ=60)

                    AAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGT                                                                           >  SRR4302540.8811592/1‑94 (MQ=60)

                    AAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGT                                                                           <  SRR4302540.7461392/94‑1 (MQ=60)

                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         <  SRR4302540.8602037/94‑1 (MQ=60)

                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         <  SRR4302540.8553446/94‑1 (MQ=60)

                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         <  SRR4302540.2804472/94‑1 (MQ=60)

                      AGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTAC                                                                         >  SRR4302540.4282219/1‑94 (MQ=60)

                       GCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACG                                                                        <  SRR4302540.366272/94‑1 (MQ=60)

                         GAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGC                                                                      >  SRR4302540.6208232/1‑94 (MQ=60)

                         GAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGC                                                                      >  SRR4302540.950179/1‑94 (MQ=60)

                          AACTGGTACAACGCAGCCCATTTATGATGCTGGTAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCA                                                                     <  SRR4302540.9247614/94‑1 (MQ=60)

                          AACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCA                                                                     <  SRR4302540.663195/94‑1 (MQ=60)

                           ACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAG                                                                    <  SRR4302540.3416090/94‑1 (MQ=60)

                           ACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAG                                                                    >  SRR4302540.6366331/1‑94 (MQ=60)

                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   >  SRR4302540.8624253/1‑94 (MQ=60)

                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   <  SRR4302540.6515993/94‑1 (MQ=60)

                            CTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGA                                                                   >  SRR4302540.3246657/1‑94 (MQ=60)

                             TGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTCCGGGAGAG                                                                  >  SRR4302540.3090365/1‑94 (MQ=60)

                             TGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAG                                                                  >  SRR4302540.3868668/1‑94 (MQ=60)

                              GGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGCACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGT                                                                 >  SRR4302540.3097479/1‑94 (MQ=60)

                              GGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGGGGTGGTACGGCAGAGG                                                                 >  SRR4302540.2240492/1‑94 (MQ=60)

                               GTACAACGCAGCCCATTTATGATGTTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                >  SRR4302540.6810330/1‑94 (MQ=60)

                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302540.3565574/94‑1 (MQ=60)

                               GTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTG                                                                <  SRR4302540.8744821/94‑1 (MQ=60)

                                 ACAACGCATCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGGGCGGGAACATATGGGCCGCTAGGGGCTGGCGcagggcgggcagggggat                                                              >  SRR4302540.3506267/1‑76 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATA                                                             <  SRR4302540.7450610/94‑1 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATA                                                             <  SRR4302540.158866/94‑1 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATA                                                             <  SRR4302540.6625244/94‑1 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATA                                                             <  SRR4302540.5017083/94‑1 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATA                                                             >  SRR4302540.8608835/1‑94 (MQ=60)

                                  CAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGACAGAGTGATA                                                             >  SRR4302540.9521196/1‑94 (MQ=60)

                                   AACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAA                                                            <  SRR4302540.4599976/94‑1 (MQ=60)

                                    ACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAAC                                                           <  SRR4302540.7553919/94‑1 (MQ=60)

                                    ACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAAC                                                           >  SRR4302540.3594572/1‑94 (MQ=60)

                                    ACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAAC                                                           <  SRR4302540.4701062/94‑1 (MQ=60)

                                    ACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAAC                                                           >  SRR4302540.5173476/1‑94 (MQ=60)

                                     CGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACT                                                          >  SRR4302540.9359054/1‑94 (MQ=60)

                                      GCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTC                                                         >  SRR4302540.5488713/1‑94 (MQ=60)

                                       CAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCA                                                        >  SRR4302540.7208583/1‑94 (MQ=60)

                                        AGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAT                                                       >  SRR4302540.3992172/1‑94 (MQ=60)

                                        AGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCAT                                                       >  SRR4302540.7687001/1‑94 (MQ=60)

                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTT                                                     >  SRR4302540.4014430/1‑94 (MQ=60)

                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTT                                                     >  SRR4302540.5801194/1‑94 (MQ=60)

                                          CCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGGGATAACTCATTT                                                     >  SRR4302540.1648577/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302540.3922559/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302540.1915729/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302540.1667974/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302540.3051047/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    >  SRR4302540.1515099/1‑94 (MQ=60)

                                           CCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTG                                                    <  SRR4302540.992351/94‑1 (MQ=60)

                                            CATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGT                                                   <  SRR4302540.10044340/94‑1 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGGGGGAAAACTCATTTGCA                                                  >  SRR4302540.8007663/1‑94 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  <  SRR4302540.7059970/94‑1 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  <  SRR4302540.8291246/94‑1 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  <  SRR4302540.3436118/94‑1 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  >  SRR4302540.7873426/1‑94 (MQ=60)

                                             ATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTA                                                  <  SRR4302540.5230135/94‑1 (MQ=60)

                                              TTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAT                                                 <  SRR4302540.5864787/94‑1 (MQ=60)

                                              TTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAT                                                 <  SRR4302540.1784279/94‑1 (MQ=60)

                                              TTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAT                                                 <  SRR4302540.7767738/94‑1 (MQ=60)

                                              TTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAT                                                 <  SRR4302540.7767740/94‑1 (MQ=60)

                                              TTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGCGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTAT                                                 <  SRR4302540.5864786/94‑1 (MQ=60)

                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                <  SRR4302540.4247633/94‑1 (MQ=60)

                                               TTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATT                                                <  SRR4302540.2633460/94‑1 (MQ=60)

                                                TATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGTGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTG                                               <  SRR4302540.700217/94‑1 (MQ=60)

                                                TATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTG                                               <  SRR4302540.104840/94‑1 (MQ=60)

                                                 ATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGC                                              >  SRR4302540.3908398/1‑94 (MQ=60)

                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302540.3384141/94‑1 (MQ=60)

                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302540.6714458/94‑1 (MQ=60)

                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             <  SRR4302540.2478373/94‑1 (MQ=60)

                                                  TGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCT                                             >  SRR4302540.4337201/1‑94 (MQ=60)

                                                   GATGCTGGCATAAGAAGTACCTGAGGCGCGGGAACATAGGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTG                                            <  SRR4302540.3681653/94‑1 (MQ=60)

                                                   GATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTG                                            <  SRR4302540.3418456/94‑1 (MQ=60)

                                                   GATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTG                                            >  SRR4302540.9819314/1‑94 (MQ=60)

                                                   GATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTG                                            >  SRR4302540.9950120/1‑94 (MQ=60)

                                                    ATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGG                                           <  SRR4302540.3435818/94‑1 (MQ=60)

                                                     TGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGC                                          <  SRR4302540.9952769/94‑1 (MQ=60)

                                                      GCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCG                                         <  SRR4302540.4771221/94‑1 (MQ=60)

                                                        TGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGAC                                       >  SRR4302540.8063389/1‑94 (MQ=60)

                                                        TGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGAC                                       <  SRR4302540.8769050/94‑1 (MQ=60)

                                                        TGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGAC                                       <  SRR4302540.6298156/94‑1 (MQ=60)

                                                          GCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACAC                                     <  SRR4302540.8133242/94‑1 (MQ=60)

                                                          GCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGCACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACAC                                     >  SRR4302540.5480708/1‑94 (MQ=60)

                                                           CAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACA                                    >  SRR4302540.8103708/1‑94 (MQ=60)

                                                           CAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACA                                    <  SRR4302540.9234534/94‑1 (MQ=60)

                                                           CAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACA                                    >  SRR4302540.9325237/1‑94 (MQ=60)

                                                           CAGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACA                                    >  SRR4302540.7310189/1‑94 (MQ=60)

                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATaagcgctagatcggaagagcggttcagcaggaatgccgagacc                                   >  SRR4302540.5563162/1‑51 (MQ=60)

                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302540.4513684/1‑94 (MQ=60)

                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   <  SRR4302540.233734/94‑1 (MQ=60)

                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302540.5476024/1‑94 (MQ=60)

                                                            AGAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAA                                   >  SRR4302540.5479079/1‑94 (MQ=60)

                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  <  SRR4302540.2777250/94‑1 (MQ=60)

                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  <  SRR4302540.10078768/94‑1 (MQ=60)

                                                             GAAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAAC                                  >  SRR4302540.3147711/1‑94 (MQ=60)

                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 <  SRR4302540.6570000/94‑1 (MQ=60)

                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 >  SRR4302540.721047/1‑94 (MQ=60)

                                                              AAGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACG                                 >  SRR4302540.8806518/1‑94 (MQ=60)

                                                               AGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGA                                >  SRR4302540.7214667/1‑94 (MQ=60)

                                                               AGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGA                                <  SRR4302540.6702630/94‑1 (MQ=60)

                                                               AGAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGA                                >  SRR4302540.6237682/1‑94 (MQ=60)

                                                                GAAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAA                               <  SRR4302540.2713419/94‑1 (MQ=60)

                                                                 AAGTACCTGAGGCGCGGGGACATATGGGGCGCTACGGGCTGGCGATGGcacgcaagagtcataacgtgtttgtattgcgcgggacagacacaca                              >  SRR4302540.1755084/1‑48 (MQ=60)

                                                                 AAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAA                              >  SRR4302540.4728334/1‑94 (MQ=60)

                                                                 AAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAA                              >  SRR4302540.9390391/1‑94 (MQ=60)

                                                                 AAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAA                              >  SRR4302540.1755083/1‑94 (MQ=60)

                                                                 AAGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAA                              >  SRR4302540.9390390/1‑94 (MQ=60)

                                                                  AGTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAAT                             >  SRR4302540.2029783/1‑94 (MQ=60)

                                                                   GTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATC                            <  SRR4302540.2294139/94‑1 (MQ=60)

                                                                   GTACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATC                            <  SRR4302540.877622/94‑1 (MQ=60)

                                                                    TAGCTGAGGCGCGGGAATATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCT                           <  SRR4302540.8731587/94‑1 (MQ=60)

                                                                    TACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCT                           <  SRR4302540.7955957/94‑1 (MQ=60)

                                                                    TACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCT                           >  SRR4302540.7944675/1‑94 (MQ=60)

                                                                     ACCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTA                          >  SRR4302540.7591409/1‑94 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         >  SRR4302540.3876265/1‑94 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         >  SRR4302540.7516166/1‑94 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         >  SRR4302540.635937/1‑94 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         <  SRR4302540.3822443/94‑1 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         >  SRR4302540.1788370/1‑94 (MQ=60)

                                                                      CCTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGGCATAACTCATTTGTATTGCTGGCGACACAACGAAATCTAC                         >  SRR4302540.1788369/1‑94 (MQ=60)

                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGTTGGTACGGCAGAGTGAGAACTCAGTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302540.2945777/1‑94 (MQ=60)

                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        <  SRR4302540.3856016/94‑1 (MQ=60)

                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        >  SRR4302540.3207497/1‑94 (MQ=60)

                                                                       CTGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACT                        <  SRR4302540.6705392/94‑1 (MQ=60)

                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       <  SRR4302540.3565846/94‑1 (MQ=60)

                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       >  SRR4302540.3061352/1‑94 (MQ=60)

                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       <  SRR4302540.7656618/94‑1 (MQ=60)

                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       >  SRR4302540.1080380/1‑94 (MQ=60)

                                                                        TGAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTG                       <  SRR4302540.10072903/94‑1 (MQ=60)

                                                                         GAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGA                      <  SRR4302540.5643832/94‑1 (MQ=60)

                                                                         GAGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGA                      >  SRR4302540.8112629/1‑94 (MQ=60)

                                                                          AGGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGAC                     <  SRR4302540.4726063/94‑1 (MQ=60)

                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACG                    >  SRR4302540.2559330/1‑94 (MQ=60)

                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACG                    >  SRR4302540.7195839/1‑94 (MQ=60)

                                                                           GGCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACG                    >  SRR4302540.9681467/1‑94 (MQ=60)

                                                                            GCGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGC                   >  SRR4302540.937287/1‑94 (MQ=60)

                                                                             CGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCT                  >  SRR4302540.932899/1‑94 (MQ=60)

                                                                             CGCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCT                  >  SRR4302540.7279945/1‑94 (MQ=60)

                                                                              GCGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTT                 <  SRR4302540.587222/94‑1 (MQ=60)

                                                                               CGGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTA                >  SRR4302540.4511125/1‑94 (MQ=60)

                                                                                GGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAA               >  SRR4302540.3897338/1‑94 (MQ=60)

                                                                                GGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAA               <  SRR4302540.290686/94‑1 (MQ=60)

                                                                                GGGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAA               >  SRR4302540.8437963/1‑94 (MQ=60)

                                                                                 GGAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAAC              >  SRR4302540.1915225/1‑94 (MQ=60)

                                                                                  GAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302540.5173800/94‑1 (MQ=60)

                                                                                  GAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302540.6240160/94‑1 (MQ=60)

                                                                                  GAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302540.2050420/94‑1 (MQ=60)

                                                                                  GAACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACC             <  SRR4302540.6163607/94‑1 (MQ=60)

                                                                                   AACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCG            >  SRR4302540.6602236/1‑94 (MQ=60)

                                                                                   AACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCG            >  SRR4302540.1918547/1‑94 (MQ=60)

                                                                                    ACATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGT           >  SRR4302540.7190280/1‑94 (MQ=60)

                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          <  SRR4302540.5898857/94‑1 (MQ=60)

                                                                                     CATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTG          >  SRR4302540.8699757/1‑94 (MQ=60)

                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         >  SRR4302540.8133457/1‑94 (MQ=60)

                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         >  SRR4302540.57013/1‑94 (MQ=60)

                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         >  SRR4302540.3851181/1‑94 (MQ=60)

                                                                                      ATATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGC         >  SRR4302540.4198543/1‑94 (MQ=60)

                                                                                       TATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCT        >  SRR4302540.9427657/1‑94 (MQ=60)

                                                                                       TAGGGGGCGCTACGGGCGGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCTACACAACGAAATCTACTGACGCTTAACCGTGCT        <  SRR4302540.7831406/94‑1 (MQ=60)

                                                                                        ATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTT       <  SRR4302540.2329733/94‑1 (MQ=60)

                                                                                        ATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTT       >  SRR4302540.9696367/1‑94 (MQ=60)

                                                                                        ATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTT       >  SRR4302540.965619/1‑94 (MQ=60)

                                                                                        ATGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTT       <  SRR4302540.4850082/94‑1 (MQ=60)

                                                                                         TGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC      <  SRR4302540.4141221/94‑1 (MQ=60)

                                                                                         TGGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTC      >  SRR4302540.7903234/1‑94 (MQ=60)

                                                                                          GGGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCA     >  SRR4302540.3905899/1‑94 (MQ=60)

                                                                                           GGGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTAAG    <  SRR4302540.564045/94‑1 (MQ=60)

                                                                                            GGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGC   <  SRR4302540.5242888/94‑1 (MQ=60)

                                                                                            GGCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGC   <  SRR4302540.6399035/94‑1 (MQ=60)

                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  <  SRR4302540.654452/94‑1 (MQ=60)

                                                                                             GCGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  >  SRR4302540.10011676/1‑94 (MQ=60)

CCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCC  >  NC_000913/4108040‑4108226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`