Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,112,113 T→C intergenic (‑61/+36) fpr ← / ← glpX ferredoxin‑NADP reductase/GlpX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,112,1130TC99.8% 1512.4 / NA 462intergenic (‑61/+36)fpr/glpXferredoxin‑NADP reductase/GlpX
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (227/234);  minor base A (1/0);  total (228/234)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 495 total aligned reads displayed.

AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202
                                                                                          |                                                                                         
aGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGccc                                                                                         <  2:6916416/93‑1 (MQ=255)
 gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc                                                                                        >  2:1971325/1‑93 (MQ=255)
 gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc                                                                                        >  1:2118495/1‑93 (MQ=255)
  tGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCg                                                                                       >  1:5958044/1‑93 (MQ=255)
   gACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGa                                                                                      <  1:4803072/93‑1 (MQ=255)
    aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa                                                                                     >  1:7525146/1‑93 (MQ=255)
    aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa                                                                                     >  1:4718644/1‑93 (MQ=255)
     cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg                                                                                    >  1:3168101/1‑93 (MQ=255)
       ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  >  1:8719658/1‑93 (MQ=255)
       ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  <  1:1392553/93‑1 (MQ=255)
       ttGCCTGTTACCCAATCAGCCATGTTTGTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  <  1:1964676/93‑1 (MQ=255)
        tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  1:1014487/93‑1 (MQ=255)
        tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  1:3479557/93‑1 (MQ=255)
          gcTGTTAACCAATGAGACATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTg                                                                               <  1:1609539/92‑1 (MQ=255)
          ccTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCATCCCCGAAAGACTg                                                                               >  2:6378353/1‑93 (MQ=255)
           cTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTgg                                                                              <  1:5836716/93‑1 (MQ=255)
           cTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTgg                                                                              <  2:9039400/93‑1 (MQ=255)
           cTGTTACCCAATCAGCCATGTTTTTCTCCGGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTgg                                                                              >  1:5171470/1‑93 (MQ=255)
            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:2712729/1‑93 (MQ=255)
            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             <  2:4282076/93‑1 (MQ=255)
             gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  2:478208/93‑1 (MQ=255)
             gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa                                                                            <  1:2460525/93‑1 (MQ=255)
              ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg                                                                           <  2:8076982/93‑1 (MQ=255)
               tACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAgg                                                                          >  1:6720336/1‑93 (MQ=255)
                aCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGc                                                                         >  2:6589634/1‑93 (MQ=255)
                   cAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCa                                                                      <  2:5651261/93‑1 (MQ=255)
                      tCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAAGACTGGAAGGCTCAATc                                                                   >  1:5698344/1‑93 (MQ=255)
                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  1:9095666/1‑93 (MQ=255)
                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  2:9455729/1‑93 (MQ=255)
                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              >  1:5060174/1‑93 (MQ=255)
                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              <  2:730286/93‑1 (MQ=255)
                            aTGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaa                                                             >  1:4285750/1‑93 (MQ=255)
                             tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            >  2:3506033/1‑93 (MQ=255)
                              gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  2:6741707/1‑93 (MQ=255)
                              gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  1:2312438/1‑93 (MQ=255)
                               tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAACAATTCCAGCCCCGAAGTACTCGACGACTTAATCGatcaacta                                                          >  2:7239492/1‑90 (MQ=255)
                               tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc                                                          >  1:3232836/1‑93 (MQ=255)
                                ttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatca                                                         >  2:5077142/1‑93 (MQ=255)
                                ttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatca                                                         >  2:622490/1‑93 (MQ=255)
                                   tctcCTTTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc                                                      <  1:2820391/93‑1 (MQ=255)
                                     tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  2:3815092/1‑93 (MQ=255)
                                     tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    <  2:7341583/93‑1 (MQ=255)
                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  2:5181120/93‑1 (MQ=255)
                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  1:6206315/93‑1 (MQ=255)
                                        tGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGGAGGCTCAATCGATGAAATCAATCAGAgg                                                 >  1:9777775/1‑93 (MQ=255)
                                        tGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAgg                                                 <  2:7706264/93‑1 (MQ=255)
                                         tttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:54753/92‑1 (MQ=255)
                                         gTTTTGATTTACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:8536162/93‑1 (MQ=255)
                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGGGGa                                                >  2:3148340/1‑93 (MQ=255)
                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                >  1:4575067/1‑93 (MQ=255)
                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                >  2:915341/1‑93 (MQ=255)
                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                >  1:1034399/1‑93 (MQ=255)
                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               <  2:3636845/93‑1 (MQ=255)
                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               <  2:8536318/93‑1 (MQ=255)
                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCACGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               >  2:8646125/1‑93 (MQ=255)
                                           tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg                                              <  1:8101438/93‑1 (MQ=255)
                                              gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGAACTGGAAGGCTCAATCGATCAAATCAATAAGAGGATGTGc                                           >  2:7100000/1‑93 (MQ=255)
                                               attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa                                          <  2:6511601/93‑1 (MQ=255)
                                                 tgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAcc                                        <  2:6019883/93‑1 (MQ=255)
                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt                                       >  1:6895315/1‑93 (MQ=255)
                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt                                       <  2:6101480/93‑1 (MQ=255)
                                                   aCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTg                                      <  1:176443/93‑1 (MQ=255)
                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGc                                     >  2:1825079/1‑93 (MQ=255)
                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGc                                     <  2:7500058/93‑1 (MQ=255)
                                                     ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa                                    <  2:4563146/93‑1 (MQ=255)
                                                      tGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAt                                   <  2:5377195/93‑1 (MQ=255)
                                                       gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt                                  <  2:4160398/93‑1 (MQ=255)
                                                        ccTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAttt                                 <  2:1174755/93‑1 (MQ=255)
                                                        ccTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAttt                                 >  2:8301038/1‑93 (MQ=255)
                                                        ccTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAttc                                 >  1:7722678/1‑92 (MQ=255)
                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  2:2651476/1‑93 (MQ=255)
                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                >  2:2453316/1‑93 (MQ=255)
                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGACGATGTGCACCTGCATTTc                                >  1:6531963/1‑93 (MQ=255)
                                                            aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg                             >  1:6799305/1‑93 (MQ=255)
                                                             tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            >  2:8856490/1‑93 (MQ=255)
                                                             tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            <  2:2965324/93‑1 (MQ=255)
                                                             tCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCggg                            >  2:5792609/1‑93 (MQ=255)
                                                               ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  2:1003394/1‑93 (MQ=255)
                                                                tCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCt                         <  1:3766801/93‑1 (MQ=255)
                                                                tCGTTCTCCGAACAAAAAAATGCCAGCACCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCt                         <  1:8883052/93‑1 (MQ=255)
                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       >  1:922203/1‑93 (MQ=255)
                                                                   ttCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTg                      >  1:7873315/1‑93 (MQ=255)
                                                                    tctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGc                     >  1:3918593/1‑93 (MQ=255)
                                                                      tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa                   <  2:966989/93‑1 (MQ=255)
                                                                       ccGAACAAAAAAATTCCAGCCACGAATGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAt                  <  1:2924916/93‑1 (MQ=255)
                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               <  2:1375012/93‑1 (MQ=255)
                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               <  2:1702854/93‑1 (MQ=255)
                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               <  2:3958532/93‑1 (MQ=255)
                                                                           aCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAg              >  2:3738249/1‑93 (MQ=255)
                                                                           aCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGGCTTTGCGATCCAg              >  1:8978585/1‑93 (MQ=255)
                                                                            cAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGa             <  2:1252612/93‑1 (MQ=255)
                                                                            cAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGa             <  1:7270218/93‑1 (MQ=255)
                                                                             aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt            >  1:9555519/1‑93 (MQ=255)
                                                                              aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa           <  1:4102879/93‑1 (MQ=255)
                                                                              aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa           >  2:3309885/1‑93 (MQ=255)
                                                                                    ttCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat     >  2:9349941/1‑93 (MQ=255)
                                                                                    ttCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat     <  2:4467469/93‑1 (MQ=255)
                                                                                    gtCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat     <  1:8403349/92‑1 (MQ=255)
                                                                                      ccAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatgg   >  1:1201859/1‑93 (MQ=255)
                                                                                       cAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatgga  <  1:4967429/93‑1 (MQ=255)
                                                                                          |                                                                                         
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 253 total aligned reads displayed.
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  >  NC_000913/4112020‑4112204
                                                                                              |                                                                                           
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGC                                                                                             >  SRR4302540.7522172/1‑94 (MQ=60)
 TTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCC                                                                                            >  SRR4302540.9587389/1‑94 (MQ=60)
  TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC                                                                                           <  SRR4302540.3821963/94‑1 (MQ=60)
  TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC                                                                                           >  SRR4302540.5089571/1‑94 (MQ=60)
  TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC                                                                                           <  SRR4302540.4532342/94‑1 (MQ=60)
  TAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTATCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCC                                                                                           <  SRR4302540.6254635/94‑1 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                          >  SRR4302540.688152/1‑94 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                          <  SRR4302540.484414/94‑1 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                          >  SRR4302540.2141233/1‑94 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                          >  SRR4302540.2141232/1‑94 (MQ=60)
   AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC                                                                                          <  SRR4302540.1254355/94‑1 (MQ=60)
    GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCG                                                                                         <  SRR4302540.8655063/94‑1 (MQ=60)
    GTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCG                                                                                         >  SRR4302540.6023941/1‑94 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                        >  SRR4302540.7587573/1‑94 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                        >  SRR4302540.5155811/1‑94 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                        >  SRR4302540.2036512/1‑94 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                        <  SRR4302540.5871032/94‑1 (MQ=60)
     TGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGA                                                                                        >  SRR4302540.1753335/1‑94 (MQ=60)
      GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA                                                                                       >  SRR4302540.7609345/1‑94 (MQ=60)
      GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA                                                                                       <  SRR4302540.4854476/94‑1 (MQ=60)
      GACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAA                                                                                       >  SRR4302540.4769050/1‑94 (MQ=60)
       GCTTTGGCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAG                                                                                      <  SRR4302540.1834946/94‑1 (MQ=60)
       ACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAG                                                                                      <  SRR4302540.5512808/94‑1 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                    <  SRR4302540.4522449/94‑1 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                    >  SRR4302540.8820896/1‑94 (MQ=60)
         TTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGA                                                                                    <  SRR4302540.3565344/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.6833052/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.5542558/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.8633981/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   >  SRR4302540.4675427/1‑94 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.4549301/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.1407470/94‑1 (MQ=60)
          TTGCCTGTTACCCAATCAGCCATGTTTGTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC                                                                                   <  SRR4302540.1986013/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                  <  SRR4302540.3517443/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                  <  SRR4302540.7174463/94‑1 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                  >  SRR4302540.8068093/1‑94 (MQ=60)
           TGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACT                                                                                  <  SRR4302540.1024772/94‑1 (MQ=60)
            GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG                                                                                 >  SRR4302540.7719485/1‑94 (MQ=60)
            GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG                                                                                 >  SRR4302540.7719486/1‑94 (MQ=60)
            GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG                                                                                 <  SRR4302540.9188062/94‑1 (MQ=60)
             GCTGTTAACCAATGAGACATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG                                                                                <  SRR4302540.1627166/94‑1 (MQ=60)
             CCTGTTACCCAATCAGCCATGTTTTTCTCCGGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG                                                                                >  SRR4302540.5227747/1‑94 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                               <  SRR4302540.5450327/94‑1 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                               <  SRR4302540.7524808/94‑1 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                               <  SRR4302540.5901249/94‑1 (MQ=60)
              CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                               >  SRR4302540.2741981/1‑94 (MQ=60)
              CGGTTACCCAACCAGCCATGTTTTTCTCCTGTTTTGATTGACGTGTCTAACCTTCGTTCTCCGAGCAAAAAAATTCCAGCCCCGAAGGACTGGA                                                                               <  SRR4302540.6594383/94‑1 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                              <  SRR4302540.2804406/94‑1 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                              <  SRR4302540.9935867/94‑1 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                              <  SRR4302540.1224721/94‑1 (MQ=60)
               TGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAA                                                                              >  SRR4302540.5989518/1‑94 (MQ=60)
                GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG                                                                             <  SRR4302540.2487012/94‑1 (MQ=60)
                 TTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGG                                                                            >  SRR4302540.9575520/1‑94 (MQ=60)
                 TTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGG                                                                            >  SRR4302540.4293829/1‑94 (MQ=60)
                 TTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGG                                                                            >  SRR4302540.6794501/1‑94 (MQ=60)
                     CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                        <  SRR4302540.677288/94‑1 (MQ=60)
                     CAAATAAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA                                                                        <  SRR4302540.5687658/94‑1 (MQ=60)
                      CAATCAGCCATGTTTTTCTCCTGCTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAA                                                                       >  SRR4302540.192570/1‑94 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGCAGGACTGGAAGGCTCAAT                                                                      >  SRR4302540.6156669/1‑94 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                      <  SRR4302540.2388350/94‑1 (MQ=60)
                       AATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAT                                                                      <  SRR4302540.9267174/94‑1 (MQ=60)
                        ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTTTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC                                                                     >  SRR4302540.4193236/1‑94 (MQ=60)
                        ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC                                                                     >  SRR4302540.5912138/1‑94 (MQ=60)
                        ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAAGACTGGAAGGCTCAATC                                                                     >  SRR4302540.5761083/1‑94 (MQ=60)
                         TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCCGAAGGACTGGAAGGCTCAATC                                                                     <  SRR4302540.4370895/94‑1 (MQ=60)
                         TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG                                                                    >  SRR4302540.5155059/1‑94 (MQ=60)
                         TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG                                                                    <  SRR4302540.6577990/94‑1 (MQ=60)
                         TCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG                                                                    <  SRR4302540.3870783/94‑1 (MQ=60)
                           AGCCATGTTTTTCTCCTGTTTTGATTGTCTTGCCTTATCTTCGTTCTCCGTACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT                                                                  >  SRR4302540.5063139/1‑94 (MQ=60)
                            GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC                                                                 <  SRR4302540.801267/94‑1 (MQ=60)
                            GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC                                                                 <  SRR4302540.9094312/94‑1 (MQ=60)
                            GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC                                                                 >  SRR4302540.9956759/1‑94 (MQ=60)
                             CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA                                                                >  SRR4302540.10103360/1‑94 (MQ=60)
                             CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA                                                                >  SRR4302540.5114885/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                               >  SRR4302540.4332370/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                               >  SRR4302540.3481760/1‑94 (MQ=60)
                              CATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTACTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAA                                                               <  SRR4302540.9025627/94‑1 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAA                                                              >  SRR4302540.1043320/1‑94 (MQ=60)
                               ATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGGTCTCCGAACAAAAAAATTCCAGCCCCCAAGGACTGGAAGGATCAATCGATCAAT                                                              >  SRR4302540.146429/1‑94 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                             <  SRR4302540.9322866/94‑1 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                             <  SRR4302540.3263524/94‑1 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                             <  SRR4302540.290909/94‑1 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                             <  SRR4302540.4995751/94‑1 (MQ=60)
                                TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT                                                             >  SRR4302540.2337330/1‑94 (MQ=60)
                                 GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC                                                            >  SRR4302540.1433778/1‑94 (MQ=60)
                                 GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC                                                            >  SRR4302540.3267989/1‑94 (MQ=60)
                                 GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC                                                            >  SRR4302540.3267990/1‑94 (MQ=60)
                                 GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC                                                            <  SRR4302540.3863873/94‑1 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA                                                           <  SRR4302540.3100396/94‑1 (MQ=60)
                                  TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCA                                                           >  SRR4302540.6131326/1‑94 (MQ=60)
                                    TTTCTCCTTTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAAT                                                         <  SRR4302540.8410038/94‑1 (MQ=60)
                                    TTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAAT                                                         >  SRR4302540.6537332/1‑94 (MQ=60)
                                     TTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATC                                                        <  SRR4302540.9729533/94‑1 (MQ=60)
                                      TCTCCTTTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                       <  SRR4302540.2850855/94‑1 (MQ=60)
                                      TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                       <  SRR4302540.699749/94‑1 (MQ=60)
                                      TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA                                                       <  SRR4302540.6631459/94‑1 (MQ=60)
                                        TCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGA                                                     >  SRR4302540.1439480/1‑94 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                    <  SRR4302540.6275396/94‑1 (MQ=60)
                                         CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG                                                    <  SRR4302540.3487707/94‑1 (MQ=60)
                                          CTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGGAGGCTCAATCGATGAAATCAATCAGAGG                                                   >  SRR4302540.9892388/1‑94 (MQ=60)
                                          CTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGG                                                   <  SRR4302540.5847520/94‑1 (MQ=60)
                                          CTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGG                                                   >  SRR4302540.9774356/1‑94 (MQ=60)
                                           TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA                                                  >  SRR4302540.4624421/1‑94 (MQ=60)
                                           TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA                                                  >  SRR4302540.1044916/1‑94 (MQ=60)
                                           TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA                                                  >  SRR4302540.1044917/1‑94 (MQ=60)
                                           TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA                                                  >  SRR4302540.7123655/1‑94 (MQ=60)
                                            TTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                                 <  SRR4302540.55301/94‑1 (MQ=60)
                                            GTTTTGATTTACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                                 <  SRR4302540.8635349/94‑1 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                                 <  SRR4302540.892193/94‑1 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                                 >  SRR4302540.253702/1‑94 (MQ=60)
                                            GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT                                                 <  SRR4302540.4989949/94‑1 (MQ=60)
                                             TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG                                                <  SRR4302540.5108804/94‑1 (MQ=60)
                                              TTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGT                                               <  SRR4302540.8195467/94‑1 (MQ=60)
                                              TTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGT                                               <  SRR4302540.5766884/94‑1 (MQ=60)
                                              TTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGT                                               <  SRR4302540.245308/94‑1 (MQ=60)
                                               TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG                                              <  SRR4302540.6847065/94‑1 (MQ=60)
                                               TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG                                              <  SRR4302540.1728102/94‑1 (MQ=60)
                                               TTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTG                                              >  SRR4302540.84171/1‑94 (MQ=60)
                                                 GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA                                            <  SRR4302540.8805642/94‑1 (MQ=60)
                                                  ATTGACTTGCCTTATCTTCGTTCTCCTAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAC                                           >  SRR4302540.2800572/1‑94 (MQ=60)
                                                    TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT                                         >  SRR4302540.6971840/1‑94 (MQ=60)
                                                    TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT                                         >  SRR4302540.9779267/1‑94 (MQ=60)
                                                    TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGACCCGAAGGACTGGAAGGCTCAATCGATCAAATCCATCAGAGGATGTGCACCT                                         >  SRR4302540.6971839/1‑94 (MQ=60)
                                                     GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG                                        <  SRR4302540.1857015/94‑1 (MQ=60)
                                                      ACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGC                                       <  SRR4302540.178201/94‑1 (MQ=60)
                                                      ACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGC                                       <  SRR4302540.178200/94‑1 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                    >  SRR4302540.3091900/1‑94 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                    >  SRR4302540.320126/1‑94 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                    <  SRR4302540.9271947/94‑1 (MQ=60)
                                                         TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                    >  SRR4302540.7926347/1‑94 (MQ=60)
                                                         TGCCTTATCTTCGTTCAACGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT                                    <  SRR4302540.9076018/94‑1 (MQ=60)
                                                          TCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                   <  SRR4302540.2299956/94‑1 (MQ=60)
                                                          GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                   <  SRR4302540.4017256/94‑1 (MQ=60)
                                                          GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                   >  SRR4302540.4777903/1‑94 (MQ=60)
                                                          GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                   <  SRR4302540.4017258/94‑1 (MQ=60)
                                                          GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT                                   >  SRR4302540.463427/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC                                  >  SRR4302540.3560505/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTC                                  >  SRR4302540.2191077/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGACCCTGCATTTC                                  >  SRR4302540.3560504/1‑94 (MQ=60)
                                                           CCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGACGATGTGCACCTGCATTTC                                  >  SRR4302540.6604483/1‑94 (MQ=60)
                                                            CTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCC                                 >  SRR4302540.2863120/1‑94 (MQ=60)
                                                             TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG                                <  SRR4302540.6952182/94‑1 (MQ=60)
                                                             TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG                                <  SRR4302540.5410353/94‑1 (MQ=60)
                                                             TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG                                >  SRR4302540.1118082/1‑94 (MQ=60)
                                                             TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG                                >  SRR4302540.7394414/1‑94 (MQ=60)
                                                             TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG                                >  SRR4302540.3508513/1‑94 (MQ=60)
                                                              TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG                               >  SRR4302540.9154316/1‑94 (MQ=60)
                                                              TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG                               >  SRR4302540.6874520/1‑94 (MQ=60)
                                                              TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG                               >  SRR4302540.6874519/1‑94 (MQ=60)
                                                               ATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGG                              <  SRR4302540.882253/94‑1 (MQ=60)
                                                               ATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGG                              <  SRR4302540.8964744/94‑1 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                             >  SRR4302540.905576/1‑94 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                             >  SRR4302540.6116332/1‑94 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                             <  SRR4302540.7945438/94‑1 (MQ=60)
                                                                TCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGT                             <  SRR4302540.7945440/94‑1 (MQ=60)
                                                                  TTCGTTCTCCGAACAAAAAAATTTCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT                           >  SRR4302540.2517760/1‑94 (MQ=60)
                                                                  TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT                           <  SRR4302540.1127550/94‑1 (MQ=60)
                                                                  TTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCT                           >  SRR4302540.3202620/1‑94 (MQ=60)
                                                                   TCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTT                          <  SRR4302540.3807897/94‑1 (MQ=60)
                                                                   TCGTTCTCCGAACAAAAAAATGCCAGCACCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTT                          <  SRR4302540.8985861/94‑1 (MQ=60)
                                                                    CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT                         <  SRR4302540.8004895/94‑1 (MQ=60)
                                                                    CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT                         >  SRR4302540.931930/1‑94 (MQ=60)
                                                                    CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT                         <  SRR4302540.5998142/94‑1 (MQ=60)
                                                                    CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT                         <  SRR4302540.4908348/94‑1 (MQ=60)
                                                                     GTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTG                        >  SRR4302540.7965283/1‑94 (MQ=60)
                                                                      TTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGC                       >  SRR4302540.6737347/1‑94 (MQ=60)
                                                                      TTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGC                       >  SRR4302540.3961016/1‑94 (MQ=60)
                                                                      TTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGC                       >  SRR4302540.5213097/1‑94 (MQ=60)
                                                                       TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG                      <  SRR4302540.9501593/94‑1 (MQ=60)
                                                                         TCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAT                    <  SRR4302540.2474036/94‑1 (MQ=60)
                                                                          CCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATC                   <  SRR4302540.2956981/94‑1 (MQ=60)
                                                                          CCGAACAAAAAAATTCCAGCCACGAATGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATC                   <  SRR4302540.2956976/94‑1 (MQ=60)
                                                                             AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG                <  SRR4302540.7701346/94‑1 (MQ=60)
                                                                             AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGGCTTTGCGATCCAG                >  SRR4302540.9085509/1‑94 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT              <  SRR4302540.2723047/94‑1 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT              <  SRR4302540.2209518/94‑1 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT              <  SRR4302540.7351344/94‑1 (MQ=60)
                                                                               CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT              >  SRR4302540.9668520/1‑94 (MQ=60)
                                                                               AAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT              <  SRR4302540.1338043/94‑1 (MQ=60)
                                                                                AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA             <  SRR4302540.9451415/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG            <  SRR4302540.4779871/94‑1 (MQ=60)
                                                                                 AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG            <  SRR4302540.4147142/94‑1 (MQ=60)
                                                                                   AAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTG          <  SRR4302540.4075194/94‑1 (MQ=60)
                                                                                    AAACTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGG         >  SRR4302540.8244958/1‑94 (MQ=60)
                                                                                     AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA        >  SRR4302540.9190379/1‑94 (MQ=60)
                                                                                     AATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGA        <  SRR4302540.1042715/94‑1 (MQ=60)
                                                                                      ATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGAT       >  SRR4302540.2803878/1‑94 (MQ=60)
                                                                                      ATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGAT       <  SRR4302540.2926906/94‑1 (MQ=60)
                                                                                      ATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGAT       <  SRR4302540.4208258/94‑1 (MQ=60)
                                                                                      ATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGAT       <  SRR4302540.2036185/94‑1 (MQ=60)
                                                                                       TTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCACTCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATG      <  SRR4302540.5718420/94‑1 (MQ=60)
                                                                                       TTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATG      <  SRR4302540.8501207/94‑1 (MQ=60)
                                                                                       GTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATG      <  SRR4302540.8500889/94‑1 (MQ=60)
                                                                                        TCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGG     >  SRR4302540.1214221/1‑94 (MQ=60)
                                                                                          CAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGAC   <  SRR4302540.5021161/94‑1 (MQ=60)
                                                                                          CAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGAC   <  SRR4302540.8789378/94‑1 (MQ=60)
                                                                                           AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  <  SRR4302540.8051543/94‑1 (MQ=60)
                                                                                           AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  >  SRR4302540.7878127/1‑94 (MQ=60)
                                                                                           AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  >  SRR4302540.8096769/1‑94 (MQ=60)
                                                                                           AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  >  SRR4302540.6573304/1‑94 (MQ=60)
                                                                                              |                                                                                           
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT  >  NC_000913/4112020‑4112204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: