Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,137,219 C→T G24R (GGG→AGG)  talC ← putative transaldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,137,2190CT99.1% 1565.0 / ‑3.4 436G24R (GGG→AGG) talCputative transaldolase
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base T (199/232);  total (201/235)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 451 total aligned reads displayed.

CCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTC  >  NC_000913/4137128‑4137308
                                                                                           |                                                                                         
 ccTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTgg                                                                                         >  2:2297697/1‑93 (MQ=255)
  cTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGc                                                                                        >  1:3676092/1‑93 (MQ=255)
  cTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGc                                                                                        >  1:6462003/1‑93 (MQ=255)
    catcaCCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCaa                                                                                      <  1:3072669/93‑1 (MQ=255)
      tcaCCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATg                                                                                    >  1:6747274/1‑93 (MQ=255)
         ccAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATgggg                                                                                 <  1:4768731/93‑1 (MQ=255)
           aaTCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGaa                                                                               <  2:1540019/93‑1 (MQ=255)
            aTCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAat                                                                              <  1:5895812/93‑1 (MQ=255)
            aTCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAat                                                                              >  1:8914278/1‑93 (MQ=255)
             tCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAata                                                                             <  2:5044076/93‑1 (MQ=255)
             acGCTTTTTGCAGACGCGGCAGCCCTTCCCAGATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAata                                                                             <  2:4465667/92‑1 (MQ=255)
              ggCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAACGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAatat                                                                            <  1:9160141/92‑1 (MQ=255)
               gCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATg                                                                           <  1:8592889/93‑1 (MQ=255)
               gCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATg                                                                           >  2:6989697/1‑93 (MQ=255)
               gCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATg                                                                           >  1:6188099/1‑93 (MQ=255)
               gCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATg                                                                           <  2:7546727/93‑1 (MQ=255)
               gCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATg                                                                           <  1:1856085/93‑1 (MQ=255)
                 tttttGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCg                                                                         >  2:3783477/1‑93 (MQ=255)
                 tttttGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCg                                                                         <  1:3938560/93‑1 (MQ=255)
                 tttttGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCg                                                                         >  1:5253485/1‑93 (MQ=255)
                  ttttGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGt                                                                        <  1:9743801/93‑1 (MQ=255)
                      gCAGACGCTGCAGCACTTTCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGCATATGCGTGCCa                                                                    >  1:4456402/1‑93 (MQ=255)
                      gCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCa                                                                    >  2:3367142/1‑93 (MQ=255)
                       cAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAg                                                                   >  2:468559/1‑93 (MQ=255)
                         gACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGAc                                                                 >  2:5382812/1‑93 (MQ=255)
                         gACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGAc                                                                 >  1:6592092/1‑93 (MQ=255)
                          aCGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACg                                                                <  2:3657819/93‑1 (MQ=255)
                           cgcgGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCATCCTGGCAATGGGGAATATGCGTGCCAGACGt                                                               <  1:771323/93‑1 (MQ=255)
                            gcgGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGtt                                                              >  2:9290601/1‑93 (MQ=255)
                              ggCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTGGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCg                                                            <  2:7778660/93‑1 (MQ=255)
                               gcagcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCgc                                                           >  1:1167191/1‑92 (MQ=255)
                               gcagcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGa                                                           <  2:5196589/93‑1 (MQ=255)
                                cagcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGAc                                                          <  1:1987837/93‑1 (MQ=255)
                                 agcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACt                                                         <  1:4652485/93‑1 (MQ=255)
                                  gcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACtt                                                        >  2:5853841/1‑93 (MQ=255)
                                   caCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTc                                                       <  2:8600217/93‑1 (MQ=255)
                                    aCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCt                                                      >  2:7116033/1‑93 (MQ=255)
                                     cTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTg                                                     <  2:4310642/93‑1 (MQ=255)
                                      ttCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGc                                                    >  2:4124192/1‑93 (MQ=255)
                                           atatGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGt                                               >  2:6277592/1‑93 (MQ=255)
                                           atatGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGt                                               <  1:5704792/93‑1 (MQ=255)
                                            tatGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGtt                                              <  2:6119515/93‑1 (MQ=255)
                                              tGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAg                                            <  2:1113035/93‑1 (MQ=255)
                                                gACTCGTTGCTGGCAGCGATAATGCTCGGGGTGGTTGGCACCCTGGCAATGGGGAATAGGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCg                                          <  1:8185799/93‑1 (MQ=255)
                                                gACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCg                                          >  1:6935904/1‑93 (MQ=255)
                                                gACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCg                                          >  2:4107473/1‑93 (MQ=255)
                                                 gcTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCgg                                         <  2:3544084/92‑1 (MQ=255)
                                                 aCTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCgg                                         <  1:9605608/93‑1 (MQ=255)
                                                 aCTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCgg                                         <  2:3849640/93‑1 (MQ=255)
                                                  cTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGgt                                        <  2:3007667/93‑1 (MQ=255)
                                                  cTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGgt                                        >  2:2724320/1‑93 (MQ=255)
                                                  cTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGgt                                        >  1:5534566/1‑93 (MQ=255)
                                                   tCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGgtg                                       >  1:7391685/1‑93 (MQ=255)
                                                   tCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGgtg                                       <  1:8827749/93‑1 (MQ=255)
                                                         cTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGa                                 <  2:6356402/93‑1 (MQ=255)
                                                         cTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGa                                 <  1:1675200/93‑1 (MQ=255)
                                                           ggCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATa                               <  1:3309083/93‑1 (MQ=255)
                                                            gCAGGGATAATGCTCGGGTTGGTTGGCCCCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAc                              <  2:8308141/93‑1 (MQ=255)
                                                            gCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAc                              <  2:1742351/93‑1 (MQ=255)
                                                            gCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAc                              <  2:8250583/93‑1 (MQ=255)
                                                            gCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAc                              <  1:6964011/93‑1 (MQ=255)
                                                             cAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACa                             <  1:3441616/93‑1 (MQ=255)
                                                             cAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACa                             <  1:9225943/93‑1 (MQ=255)
                                                              aGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAg                            >  1:5805328/1‑93 (MQ=255)
                                                               gCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGt                           >  1:2331678/1‑93 (MQ=255)
                                                               gCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGt                           <  2:2917921/93‑1 (MQ=255)
                                                               gCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGt                           <  2:1301919/93‑1 (MQ=255)
                                                                cGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGtt                          <  2:8999134/93‑1 (MQ=255)
                                                                cGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGtt                          >  1:4970919/1‑93 (MQ=255)
                                                                 gATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTc                         <  2:9899876/93‑1 (MQ=255)
                                                                  aTAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTcc                        <  1:8044093/93‑1 (MQ=255)
                                                                   tAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCa                       >  1:6102731/1‑93 (MQ=255)
                                                                   tAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCa                       <  1:10016065/93‑1 (MQ=255)
                                                                   tAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCa                       >  2:7652632/1‑93 (MQ=255)
                                                                    aaTGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCat                      >  2:660323/1‑93 (MQ=255)
                                                                     aTGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCatg                     >  2:7379725/1‑93 (MQ=255)
                                                                        gtCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCatgatg                  <  2:6710689/92‑1 (MQ=255)
                                                                          cGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGtt                <  1:8460598/93‑1 (MQ=255)
                                                                          cGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGtt                <  1:20897/93‑1 (MQ=255)
                                                                          cGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGtt                <  2:9741150/93‑1 (MQ=255)
                                                                            ggttggttGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTc              <  2:10035304/93‑1 (MQ=255)
                                                                            ggttggttGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTc              >  2:5699186/1‑93 (MQ=255)
                                                                            ggttggttGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTc              >  2:2090309/1‑93 (MQ=255)
                                                                              ttggTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTACGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCt            <  2:87495/90‑1 (MQ=255)
                                                                               tggTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCtt           >  1:2878967/3‑93 (MQ=255)
                                                                                tgTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCttt          <  2:4909427/92‑1 (MQ=255)
                                                                                ggTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCttt          <  2:4634533/92‑1 (MQ=255)
                                                                                 gTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCtttt         <  1:4254167/93‑1 (MQ=255)
                                                                                    gTCGCCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAca      <  2:1809511/93‑1 (MQ=255)
                                                                                    gTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAca      <  1:6420701/93‑1 (MQ=255)
                                                                                    gTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAca      <  2:944470/93‑1 (MQ=255)
                                                                                    gTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAca      >  1:9897148/1‑93 (MQ=255)
                                                                                     tccccctGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCGGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcag     <  1:1458904/90‑1 (MQ=255)
                                                                                     tCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcag     >  1:353210/1‑93 (MQ=255)
                                                                                     tCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcag     <  1:1393473/93‑1 (MQ=255)
                                                                                      cACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcagt    >  1:7230543/1‑93 (MQ=255)
                                                                                       aCCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTTCGTTTAcagtt   >  2:6849038/1‑93 (MQ=255)
                                                                                       aCCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcagtt   >  1:2640329/1‑93 (MQ=255)
                                                                                        ccctGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcagttc  >  1:3852413/1‑93 (MQ=255)
                                                                                        ccctGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAcagttc  >  1:7903238/1‑93 (MQ=255)
                                                                                           |                                                                                         
CCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTC  >  NC_000913/4137128‑4137308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.
TGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGT  >  NC_000913/4137126‑4137312
                                                                                             |                                                                                             
ctCCCTCATCACCAATCTCTTTTTGCAGACGCCGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCT                                                                                               <  SRR4302540.4561320/92‑1 (MQ=60)
TGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCT                                                                                               <  SRR4302540.4561321/94‑1 (MQ=60)
TGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCT                                                                                               <  SRR4302540.9079546/94‑1 (MQ=60)
 GCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTG                                                                                              <  SRR4302540.2951190/94‑1 (MQ=60)
   CCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGC                                                                                            >  SRR4302540.6533920/1‑94 (MQ=60)
   CCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGC                                                                                            >  SRR4302540.3716286/1‑94 (MQ=60)
    CTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCA                                                                                           >  SRR4302540.3675881/1‑94 (MQ=60)
    CTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCA                                                                                           <  SRR4302540.3356125/94‑1 (MQ=60)
    CTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCA                                                                                           >  SRR4302540.3485446/1‑94 (MQ=60)
    CTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCA                                                                                           >  SRR4302540.5512706/1‑94 (MQ=60)
      CATCCCCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAAT                                                                                         <  SRR4302540.3560898/94‑1 (MQ=60)
      CATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAAT                                                                                         <  SRR4302540.3560899/94‑1 (MQ=60)
      CATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAAT                                                                                         <  SRR4302540.3106381/94‑1 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATTGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        >  SRR4302540.5831230/1‑94 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        <  SRR4302540.7129377/94‑1 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        >  SRR4302540.6527327/1‑94 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        >  SRR4302540.5712711/1‑94 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        >  SRR4302540.6821826/1‑94 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        >  SRR4302540.167178/1‑94 (MQ=60)
       ATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACGCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATG                                                                                        <  SRR4302540.4307067/94‑1 (MQ=60)
        TCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGG                                                                                       <  SRR4302540.331060/94‑1 (MQ=60)
        TCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGG                                                                                       >  SRR4302540.3935865/1‑94 (MQ=60)
         CACCAATCGCTTTTTGCAGACGGGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGG                                                                                      >  SRR4302540.1856282/1‑94 (MQ=60)
         CACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGG                                                                                      <  SRR4302540.9172520/94‑1 (MQ=60)
         CACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGG                                                                                      >  SRR4302540.2686705/1‑94 (MQ=60)
          ACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGG                                                                                     >  SRR4302540.2440351/1‑94 (MQ=60)
           CCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGA                                                                                    >  SRR4302540.7674440/1‑94 (MQ=60)
           CCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGA                                                                                    <  SRR4302540.4819661/94‑1 (MQ=60)
            CAATCGCTTTTTGCAGACGCGGCAGCACTTCCCTTATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAA                                                                                   <  SRR4302540.9786271/94‑1 (MQ=60)
            CAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAA                                                                                   >  SRR4302540.729322/1‑94 (MQ=60)
             AATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAAT                                                                                  <  SRR4302540.3387316/94‑1 (MQ=60)
             AATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAAT                                                                                  >  SRR4302540.9017513/1‑94 (MQ=60)
              ATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATA                                                                                 <  SRR4302540.5960924/94‑1 (MQ=60)
              ATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATA                                                                                 >  SRR4302540.3882434/1‑94 (MQ=60)
              ATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATA                                                                                 >  SRR4302540.319707/1‑94 (MQ=60)
              ATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATA                                                                                 >  SRR4302540.7347452/1‑94 (MQ=60)
               TCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATAT                                                                                <  SRR4302540.1520380/94‑1 (MQ=60)
               TCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATAT                                                                                <  SRR4302540.2706812/94‑1 (MQ=60)
               TCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATAT                                                                                <  SRR4302540.6657484/94‑1 (MQ=60)
               TCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATAT                                                                                <  SRR4302540.4951658/94‑1 (MQ=60)
               TCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGAAATAT                                                                                <  SRR4302540.589572/94‑1 (MQ=60)
                GGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAACGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATG                                                                               <  SRR4302540.9270084/94‑1 (MQ=60)
                CGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATG                                                                               >  SRR4302540.6257003/1‑94 (MQ=60)
                CGCTTTGTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATG                                                                               <  SRR4302540.8538901/94‑1 (MQ=60)
                 GCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGC                                                                              <  SRR4302540.8692778/94‑1 (MQ=60)
                 GCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGC                                                                              <  SRR4302540.383559/94‑1 (MQ=60)
                 GCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGC                                                                              <  SRR4302540.1876441/94‑1 (MQ=60)
                  CTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCG                                                                             >  SRR4302540.5310789/1‑94 (MQ=60)
                   TTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGT                                                                            <  SRR4302540.3981113/94‑1 (MQ=60)
                   TTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGT                                                                            >  SRR4302540.5672253/1‑94 (MQ=60)
                    TTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTG                                                                           <  SRR4302540.5855325/94‑1 (MQ=60)
                    TTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTG                                                                           <  SRR4302540.9858162/94‑1 (MQ=60)
                     TTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGC                                                                          <  SRR4302540.5170344/94‑1 (MQ=60)
                        GCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAG                                                                       <  SRR4302540.5934376/94‑1 (MQ=60)
                        GCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAG                                                                       >  SRR4302540.266356/1‑94 (MQ=60)
                          AGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGAC                                                                     >  SRR4302540.10059257/1‑94 (MQ=60)
                          AGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGAC                                                                     >  SRR4302540.966583/1‑94 (MQ=60)
                          AGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGAC                                                                     >  SRR4302540.6665100/1‑94 (MQ=60)
                             CGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCATCCTGGCAATGGGGAATATGCGTGCCAGACGTT                                                                  <  SRR4302540.779529/94‑1 (MQ=60)
                             CGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTT                                                                  <  SRR4302540.9326472/94‑1 (MQ=60)
                             CGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTT                                                                  <  SRR4302540.856385/94‑1 (MQ=60)
                              GCGGGAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTC                                                                 <  SRR4302540.309537/94‑1 (MQ=60)
                              GCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTC                                                                 <  SRR4302540.8378384/94‑1 (MQ=60)
                              GCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTC                                                                 >  SRR4302540.6140115/1‑94 (MQ=60)
                              GCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTC                                                                 <  SRR4302540.6214424/94‑1 (MQ=60)
                               CGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCG                                                                <  SRR4302540.8905520/94‑1 (MQ=60)
                               CGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCG                                                                <  SRR4302540.1899527/94‑1 (MQ=60)
                               CGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCG                                                                <  SRR4302540.5841830/94‑1 (MQ=60)
                                GGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGC                                                               >  SRR4302540.1179289/1‑94 (MQ=60)
                                GGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGC                                                               >  SRR4302540.6723922/1‑94 (MQ=60)
                                GGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGA                                                               <  SRR4302540.8218918/94‑1 (MQ=60)
                                 gcaggagtttccatattggcttCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGAC                                                              <  SRR4302540.1164480/72‑1 (MQ=60)
                                 GCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGAC                                                              <  SRR4302540.4132914/94‑1 (MQ=60)
                                  CAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACT                                                             <  SRR4302540.2009382/94‑1 (MQ=60)
                                  CAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACT                                                             >  SRR4302540.2070255/1‑94 (MQ=60)
                                   AGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTT                                                            <  SRR4302540.4702273/94‑1 (MQ=60)
                                     CACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCT                                                          >  SRR4302540.935156/1‑94 (MQ=60)
                                     CACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCT                                                          <  SRR4302540.219218/94‑1 (MQ=60)
                                     CACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCT                                                          >  SRR4302540.6409108/1‑94 (MQ=60)
                                     CACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCT                                                          >  SRR4302540.2749782/1‑94 (MQ=60)
                                       CTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGC                                                        <  SRR4302540.8043758/94‑1 (MQ=60)
                                       CTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGC                                                        >  SRR4302540.143769/1‑94 (MQ=60)
                                        TTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCG                                                       >  SRR4302540.6204931/1‑94 (MQ=60)
                                          CCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGAC                                                     <  SRR4302540.6822778/94‑1 (MQ=60)
                                           CCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACG                                                    >  SRR4302540.6874059/1‑94 (MQ=60)
                                           CCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACG                                                    >  SRR4302540.8275164/1‑94 (MQ=60)
                                            CATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGT                                                   >  SRR4302540.4842063/1‑94 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  >  SRR4302540.2141218/1‑94 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  <  SRR4302540.4574971/94‑1 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  >  SRR4302540.2080711/1‑94 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  >  SRR4302540.6260925/1‑94 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  >  SRR4302540.4054800/1‑94 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  <  SRR4302540.2528337/94‑1 (MQ=60)
                                             ATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTT                                                  >  SRR4302540.155478/1‑94 (MQ=60)
                                              TATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTA                                                 >  SRR4302540.8726641/1‑94 (MQ=60)
                                               ATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAG                                                <  SRR4302540.8975424/94‑1 (MQ=60)
                                               ATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAG                                                >  SRR4302540.8677724/1‑94 (MQ=60)
                                                TGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGC                                               >  SRR4302540.1001774/1‑94 (MQ=60)
                                                 GGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCG                                              <  SRR4302540.5346018/94‑1 (MQ=60)
                                                 GGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCG                                              <  SRR4302540.2997123/94‑1 (MQ=60)
                                                 GGACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCG                                              >  SRR4302540.7013108/1‑94 (MQ=60)
                                                  GACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGG                                             <  SRR4302540.2006694/94‑1 (MQ=60)
                                                  GACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGG                                             >  SRR4302540.4725087/1‑94 (MQ=60)
                                                   ACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGT                                            >  SRR4302540.5595512/1‑94 (MQ=60)
                                                   ACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGT                                            <  SRR4302540.9718896/94‑1 (MQ=60)
                                                   ACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGT                                            >  SRR4302540.9776960/1‑94 (MQ=60)
                                                   ACTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGT                                            >  SRR4302540.1639626/1‑94 (MQ=60)
                                                    CTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTG                                           >  SRR4302540.8561451/1‑94 (MQ=60)
                                                    CTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTG                                           >  SRR4302540.7474049/1‑94 (MQ=60)
                                                    CTCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTG                                           <  SRR4302540.4343619/94‑1 (MQ=60)
                                                    CTCCTTGCTGGCAGCGATAAGGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTG                                           >  SRR4302540.9855498/1‑94 (MQ=60)
                                                     TCCTTGCTGGCAGCGATAATGCTCGGTTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGT                                          >  SRR4302540.6514479/1‑94 (MQ=60)
                                                     TCCTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGT                                          <  SRR4302540.8929837/94‑1 (MQ=60)
                                                     TCCGTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGT                                          <  SRR4302540.136406/94‑1 (MQ=60)
                                                       CTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCC                                        <  SRR4302540.9714757/94‑1 (MQ=60)
                                                       CTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCC                                        >  SRR4302540.7840465/1‑94 (MQ=60)
                                                       CTTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCC                                        <  SRR4302540.8876461/94‑1 (MQ=60)
                                                        TTGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCA                                       <  SRR4302540.5904416/94‑1 (MQ=60)
                                                         TGCTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCAAG                                      >  SRR4302540.3863433/1‑94 (MQ=60)
                                                           GTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    <  SRR4302540.8070303/94‑1 (MQ=60)
                                                           CTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    <  SRR4302540.1693398/94‑1 (MQ=60)
                                                           CTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    >  SRR4302540.9326515/1‑94 (MQ=60)
                                                           CTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    <  SRR4302540.7217178/94‑1 (MQ=60)
                                                           CTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    <  SRR4302540.4656229/94‑1 (MQ=60)
                                                           CTGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGAT                                    <  SRR4302540.5711888/94‑1 (MQ=60)
                                                            TGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATA                                   >  SRR4302540.4578955/1‑94 (MQ=60)
                                                            TGGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATA                                   >  SRR4302540.7023697/1‑94 (MQ=60)
                                                             GGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAC                                  <  SRR4302540.3345338/94‑1 (MQ=60)
                                                             GGCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATAC                                  <  SRR4302540.1165151/94‑1 (MQ=60)
                                                              GCAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACA                                 <  SRR4302540.7439452/94‑1 (MQ=60)
                                                               CAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAG                                <  SRR4302540.9336560/94‑1 (MQ=60)
                                                               CAGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAG                                <  SRR4302540.3479033/94‑1 (MQ=60)
                                                                AGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGT                               >  SRR4302540.2356800/1‑94 (MQ=60)
                                                                AGCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGT                               >  SRR4302540.3583307/1‑94 (MQ=60)
                                                                 GCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCTACTTCTGCGACGTTAGCGGTGTCCAGATACAGTT                              <  SRR4302540.4855954/94‑1 (MQ=60)
                                                                 GCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTT                              >  SRR4302540.7015110/1‑94 (MQ=60)
                                                                 GCGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTT                              >  SRR4302540.5024707/1‑94 (MQ=60)
                                                                  CGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTC                             >  SRR4302540.3119627/1‑94 (MQ=60)
                                                                  CGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTC                             <  SRR4302540.1473304/94‑1 (MQ=60)
                                                                  CGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTC                             >  SRR4302540.6047304/1‑94 (MQ=60)
                                                                  CGATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTC                             >  SRR4302540.8940741/1‑94 (MQ=60)
                                                                   GATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCC                            <  SRR4302540.8172170/94‑1 (MQ=60)
                                                                   GATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCC                            >  SRR4302540.740368/1‑94 (MQ=60)
                                                                    ATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCA                           >  SRR4302540.8805018/1‑94 (MQ=60)
                                                                    ATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCA                           <  SRR4302540.8137552/94‑1 (MQ=60)
                                                                    ATAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCA                           >  SRR4302540.6170688/1‑94 (MQ=60)
                                                                     aaagcgtcggggtgGTTGTCACCCTGGCAATTGGGAATATGAGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCAT                          <  SRR4302540.945681/80‑1 (MQ=60)
                                                                     TAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCAT                          <  SRR4302540.10132656/94‑1 (MQ=60)
                                                                     TAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCAT                          >  SRR4302540.6543983/1‑94 (MQ=60)
                                                                     TAATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCAT                          >  SRR4302540.6543982/1‑94 (MQ=60)
                                                                       ATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGA                        >  SRR4302540.9151164/1‑94 (MQ=60)
                                                                       ATGCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGA                        >  SRR4302540.7878968/1‑94 (MQ=60)
                                                                         GCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATG                      >  SRR4302540.1740930/1‑94 (MQ=60)
                                                                         GCTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATG                      >  SRR4302540.8465245/1‑94 (MQ=60)
                                                                          CTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGT                     >  SRR4302540.5061548/1‑94 (MQ=60)
                                                                          CTCGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGT                     <  SRR4302540.6762181/94‑1 (MQ=60)
                                                                            CGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCTGACGTTCTACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTT                   <  SRR4302540.4330145/94‑1 (MQ=60)
                                                                            CGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTT                   <  SRR4302540.10072182/94‑1 (MQ=60)
                                                                            CGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTT                   <  SRR4302540.8558830/94‑1 (MQ=60)
                                                                            CGGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTT                   <  SRR4302540.21125/94‑1 (MQ=60)
                                                                             GGGTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTC                  >  SRR4302540.2310010/1‑94 (MQ=60)
                                                                               GTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTGGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCT                >  SRR4302540.1897613/1‑94 (MQ=60)
                                                                               GTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCT                >  SRR4302540.7308184/1‑94 (MQ=60)
                                                                               GTTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCT                >  SRR4302540.8329888/1‑94 (MQ=60)
                                                                                TTGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTT               >  SRR4302540.2910278/1‑94 (MQ=60)
                                                                                 TGGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTT              <  SRR4302540.1246798/94‑1 (MQ=60)
                                                                                  GGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTT             <  SRR4302540.7028466/94‑1 (MQ=60)
                                                                                  GGTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTT             <  SRR4302540.7664729/94‑1 (MQ=60)
                                                                                   GTTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTA            <  SRR4302540.4300454/94‑1 (MQ=60)
                                                                                    TTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAC           <  SRR4302540.1340586/94‑1 (MQ=60)
                                                                                    TTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAC           <  SRR4302540.4807649/94‑1 (MQ=60)
                                                                                    TTGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCAACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTAC           <  SRR4302540.5804675/94‑1 (MQ=60)
                                                                                     TGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACA          <  SRR4302540.9868020/94‑1 (MQ=60)
                                                                                     TGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACA          >  SRR4302540.8076442/1‑94 (MQ=60)
                                                                                     TGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACA          <  SRR4302540.6039116/94‑1 (MQ=60)
                                                                                     TGTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACA          >  SRR4302540.10012743/1‑94 (MQ=60)
                                                                                      GTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAG         >  SRR4302540.356833/1‑94 (MQ=60)
                                                                                      GTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAG         <  SRR4302540.6492164/94‑1 (MQ=60)
                                                                                      GTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAG         <  SRR4302540.6492163/94‑1 (MQ=60)
                                                                                      GTCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAG         <  SRR4302540.3943919/94‑1 (MQ=60)
                                                                                       TCCCCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCGGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGT        <  SRR4302540.1474785/94‑1 (MQ=60)
                                                                                       TCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGT        <  SRR4302540.4098528/94‑1 (MQ=60)
                                                                                       TCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGT        <  SRR4302540.1408405/94‑1 (MQ=60)
                                                                                       TCACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGT        <  SRR4302540.9254879/94‑1 (MQ=60)
                                                                                       TCACACTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGT        <  SRR4302540.9942431/94‑1 (MQ=60)
                                                                                        CACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTT       >  SRR4302540.694524/1‑94 (MQ=60)
                                                                                        CACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTT       >  SRR4302540.5353425/1‑94 (MQ=60)
                                                                                         ACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTC      >  SRR4302540.7995409/1‑94 (MQ=60)
                                                                                         ACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTC      >  SRR4302540.3894296/1‑94 (MQ=60)
                                                                                         ACCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTC      >  SRR4302540.4724376/1‑94 (MQ=60)
                                                                                          CCCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCC     <  SRR4302540.3282999/94‑1 (MQ=60)
                                                                                           CCTGGCATTGGGTAATATGCTTGCCAGACGTTCTACTTCTGCGTCGTTAGCGTTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGCTCCA    <  SRR4302540.3136744/94‑1 (MQ=60)
                                                                                           CCTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCA    >  SRR4302540.3301692/1‑94 (MQ=60)
                                                                                            CTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAG   <  SRR4302540.2028980/94‑1 (MQ=60)
                                                                                            CTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAG   >  SRR4302540.8513313/1‑94 (MQ=60)
                                                                                            CTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAG   <  SRR4302540.2810517/94‑1 (MQ=60)
                                                                                            CTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAG   >  SRR4302540.633292/1‑94 (MQ=60)
                                                                                            CTGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAG   <  SRR4302540.4381888/94‑1 (MQ=60)
                                                                                             TGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGT  >  SRR4302540.3091737/1‑94 (MQ=60)
                                                                                             TGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGT  >  SRR4302540.5412028/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGT  >  NC_000913/4137126‑4137312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑