Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,152,979 G→A G134S (GGT→AGT)  argC → N‑acetyl‑gamma‑glutamylphosphate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,152,9790GA99.8% 1462.1 / NA 396G134S (GGT→AGT) argCN‑acetyl‑gamma‑glutamylphosphate reductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (178/217);  minor base T (0/1);  total (178/218)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 403 total aligned reads displayed.

GGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTG  >  NC_000913/4152889‑4153068
                                                                                          |                                                                                         
ggCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGt                                                                                         <  2:3750728/93‑1 (MQ=255)
ggCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGt                                                                                         <  2:4561740/93‑1 (MQ=255)
 gcgcGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTc                                                                                        <  1:2489901/93‑1 (MQ=255)
    cgTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTgg                                                                                     <  2:2188519/93‑1 (MQ=255)
     gTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGc                                                                                    <  1:4838860/93‑1 (MQ=255)
      tttCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCg                                                                                   >  2:5828162/1‑93 (MQ=255)
      tttCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCg                                                                                   >  1:9181663/1‑93 (MQ=255)
       ttCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCgg                                                                                  >  2:6281921/1‑93 (MQ=255)
        tCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCggt                                                                                 >  2:3014027/1‑92 (MQ=255)
        tCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATAACCGGAACTGTTGGAACAGGGAGCCTACAGTCTGGCggg                                                                                 >  1:6268894/1‑92 (MQ=255)
          gtgtTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAgg                                                                               >  1:9362779/1‑92 (MQ=255)
            gtTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCCGCCTACAGTCTGGCGGAgggg                                                                             >  1:3339962/1‑93 (MQ=255)
             ttAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAgtggg                                                                            >  1:4344342/1‑92 (MQ=255)
             ttAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAgtggg                                                                            >  1:5191235/1‑92 (MQ=255)
                 cgacgCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCgg                                                                        <  1:8548075/93‑1 (MQ=255)
                 cgacgCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGTGCgg                                                                        >  2:3998190/1‑93 (MQ=255)
                   acgCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGta                                                                      <  1:5971121/93‑1 (MQ=255)
                   acgCCACCCTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGta                                                                      <  2:3382921/93‑1 (MQ=255)
                    ctctaCCTGCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGACCAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGtaa                                                                     <  2:5201073/89‑1 (MQ=255)
                     gCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGtaat                                                                    >  1:3939247/1‑93 (MQ=255)
                     gCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGtaat                                                                    >  2:5444330/1‑93 (MQ=255)
                      ccACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGCTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGtaata                                                                   <  1:1708009/93‑1 (MQ=255)
                       cACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGtaataa                                                                  >  2:7408467/1‑93 (MQ=255)
                        aCCTTCTATGAAAAATATTACGGCTTTGCCCATCAATACCCGGAACTGTTGGGACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATaaa                                                                 >  2:9106140/1‑93 (MQ=255)
                        aCCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATaaa                                                                 >  2:4364309/1‑93 (MQ=255)
                         ccTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAt                                                                >  2:88113/1‑93 (MQ=255)
                         ccTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAt                                                                >  1:5648808/1‑93 (MQ=255)
                          cTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAtt                                                               <  1:5499849/93‑1 (MQ=255)
                           ttCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTa                                                              >  2:6050840/1‑93 (MQ=255)
                           ttCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTa                                                              >  2:1655525/1‑93 (MQ=255)
                           ttCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTa                                                              <  2:3089370/93‑1 (MQ=255)
                            tCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTaa                                                             <  1:87797/93‑1 (MQ=255)
                              tATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTaaaa                                                           <  2:532868/93‑1 (MQ=255)
                              tATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTaaaa                                                           >  1:2935713/1‑93 (MQ=255)
                               aTGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaag                                                          <  1:1395044/93‑1 (MQ=255)
                                tGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaaga                                                         <  2:6114630/93‑1 (MQ=255)
                                tGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaaga                                                         >  2:6963004/1‑93 (MQ=255)
                                tGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaaga                                                         <  2:2472266/93‑1 (MQ=255)
                                 gAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaagaa                                                        <  1:6657802/93‑1 (MQ=255)
                                 gAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAaagaa                                                        >  2:8578090/1‑93 (MQ=255)
                                      atatTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGaa                                                   <  2:5106027/93‑1 (MQ=255)
                                      atatTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGaa                                                   <  2:7557578/93‑1 (MQ=255)
                                      atatTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGaa                                                   <  2:1447966/93‑1 (MQ=255)
                                       tatTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCATCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAAt                                                  <  1:9803163/93‑1 (MQ=255)
                                       tatTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAAt                                                  <  2:3826614/93‑1 (MQ=255)
                                         ttACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAAttt                                                <  1:10022043/93‑1 (MQ=255)
                                         ttACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAAttt                                                >  1:2179753/1‑93 (MQ=255)
                                          tACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGTCGGATCGGTGCGGGAATAAATAAAAAGAAGCGAAtgtg                                               >  2:8945594/1‑93 (MQ=255)
                                           aCGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGa                                              >  2:8377015/1‑93 (MQ=255)
                                           aCGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGa                                              <  1:7603161/93‑1 (MQ=255)
                                            cGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAt                                             <  2:9030641/93‑1 (MQ=255)
                                            cGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAACCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAt                                             <  1:2323352/93‑1 (MQ=255)
                                             ggCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAtt                                            <  1:4513889/93‑1 (MQ=255)
                                              gCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTg                                           <  1:7807257/93‑1 (MQ=255)
                                               cTTTGCCCATCAATGCCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGc                                          <  1:1241861/93‑1 (MQ=255)
                                               cTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGc                                          >  1:3060251/1‑93 (MQ=255)
                                                tttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCg                                         >  1:5758661/1‑93 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTAGAGTCTGGCGGTGAGGGGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCgc                                        >  2:1829056/1‑92 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGACACGAATTTGAATGTgg                                        >  2:6456344/1‑93 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCgg                                        <  2:2846153/93‑1 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCgg                                        >  2:8697025/1‑93 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCgg                                        <  2:7480237/93‑1 (MQ=255)
                                                 ttACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCgg                                        <  2:8162201/93‑1 (MQ=255)
                                                  tACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGt                                       <  1:7171530/93‑1 (MQ=255)
                                                     ccATCAATACCCGGAACTGTTGGAACAGGCAGGCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGcc                                    <  1:6201103/93‑1 (MQ=255)
                                                     ccATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGcc                                    <  1:5011536/93‑1 (MQ=255)
                                                      cATCAATCCCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGTGGTGCCg                                   <  2:9175226/93‑1 (MQ=255)
                                                      cATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCg                                   <  1:3520390/93‑1 (MQ=255)
                                                      cATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCg                                   <  1:2779026/93‑1 (MQ=255)
                                                      cATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGAGGTGCCg                                   >  1:7039618/1‑93 (MQ=255)
                                                       aTCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCgg                                  <  1:9561603/93‑1 (MQ=255)
                                                        tCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCggg                                 >  2:7070729/1‑93 (MQ=255)
                                                          aaTACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGCGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCt                               >  2:5919125/1‑93 (MQ=255)
                                                            tACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGt                             >  1:7435093/1‑93 (MQ=255)
                                                              cccGGAACTGTTGGAACAGGTAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTa                           >  2:4796206/1‑93 (MQ=255)
                                                              cccGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTa                           <  2:9567663/93‑1 (MQ=255)
                                                              cccGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGAGGTGCGGTAATAAATTAAAAGAAGAGAATTTGATTGCGCTGCCGGGCTGTTa                           >  1:90728/1‑93 (MQ=255)
                                                               ccGTAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTAt                          <  1:1568888/93‑1 (MQ=255)
                                                                cGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATc                         <  2:5733553/93‑1 (MQ=255)
                                                                cGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATc                         <  1:8050377/93‑1 (MQ=255)
                                                                 ggAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGGGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATcc                        >  1:369333/1‑93 (MQ=255)
                                                                 ggAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATcc                        >  2:6829190/1‑93 (MQ=255)
                                                                 ggAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATcc                        <  1:951677/93‑1 (MQ=255)
                                                                 ggAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAACTTAATTGAGGTTCCGGGTGGTTATcg                        >  2:7900044/1‑92 (MQ=255)
                                                                  gAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCg                       <  2:3612606/93‑1 (MQ=255)
                                                                   aaCTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGa                      <  2:8851300/93‑1 (MQ=255)
                                                                    aCTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGAc                     <  2:1150016/93‑1 (MQ=255)
                                                                       gTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGCcggg                  >  1:6514655/1‑92 (MQ=255)
                                                                       gTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGAcggg                  >  2:1967257/1‑92 (MQ=255)
                                                                       gTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGAcggc                  >  1:2559438/1‑93 (MQ=255)
                                                                        ttGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGAcggcg                 >  2:10043131/1‑93 (MQ=255)
                                                                          ggAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACggcggc               >  1:8965790/1‑93 (MQ=255)
                                                                          ggAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGAAGGGCTGTTATCCGACggcggc               <  1:1843806/93‑1 (MQ=255)
                                                                           gAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGca              <  1:2052039/93‑1 (MQ=255)
                                                                            aaCAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGcac             <  2:6396875/93‑1 (MQ=255)
                                                                             acagacagCTTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGcaca            <  1:4251616/93‑1 (MQ=255)
                                                                                 gCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTg        <  1:4094842/93‑1 (MQ=255)
                                                                                    gCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGgcg     >  1:1973819/1‑93 (MQ=255)
                                                                                    gCCTACAGTCTGGCGGAGTGGTGCGGGAATAAATTAAAAGGAGCGAATTTGATTGCTGTGCCGTGCTGTTATCCGGAGCAGGCGCAGCTGtcg     >  1:5810426/1‑93 (MQ=255)
                                                                                     ccTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGgcgc    >  2:9315874/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTG  >  NC_000913/4152889‑4153068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.
TCCGGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAAC  >  NC_000913/4152886‑4153072
                                                                                             |                                                                                             
TCCGGCTCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACA                                                                                               <  SRR4302540.6091201/94‑1 (MQ=60)
 CCGGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAG                                                                                              <  SRR4302540.2665553/94‑1 (MQ=60)
    GCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCT                                                                                           <  SRR4302540.751999/94‑1 (MQ=60)
    GCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCT                                                                                           <  SRR4302540.2516718/94‑1 (MQ=60)
     CGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTG                                                                                          >  SRR4302540.2007234/1‑94 (MQ=60)
     CGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTG                                                                                          <  SRR4302540.2151805/94‑1 (MQ=60)
     CGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTG                                                                                          >  SRR4302540.7196864/1‑94 (MQ=60)
      GCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGG                                                                                         <  SRR4302540.6378534/94‑1 (MQ=60)
       CGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGC                                                                                        <  SRR4302540.9546474/94‑1 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       <  SRR4302540.4890689/94‑1 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       >  SRR4302540.3674583/1‑94 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       <  SRR4302540.259556/94‑1 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       <  SRR4302540.661080/94‑1 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       >  SRR4302540.9291782/1‑94 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       <  SRR4302540.5012864/94‑1 (MQ=60)
        GTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCG                                                                                       <  SRR4302540.5887845/94‑1 (MQ=60)
         TTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGG                                                                                      >  SRR4302540.9656651/1‑94 (MQ=60)
          TTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGA                                                                                     >  SRR4302540.6338639/1‑94 (MQ=60)
          TTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATAACCGGAACTGTTGGAACAGGGAGCCTACAGTCTGGCGGG                                                                                     >  SRR4302540.6338640/1‑94 (MQ=60)
           TCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAG                                                                                    <  SRR4302540.944200/94‑1 (MQ=60)
            CGTTTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGT                                                                                   <  SRR4302540.6134989/94‑1 (MQ=60)
            CGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGG                                                                                   >  SRR4302540.9474274/1‑94 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  >  SRR4302540.4347379/1‑94 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  >  SRR4302540.509920/1‑94 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  >  SRR4302540.8921702/1‑94 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  <  SRR4302540.5612615/94‑1 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  <  SRR4302540.7002712/94‑1 (MQ=60)
             GTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTG                                                                                  >  SRR4302540.2178802/1‑94 (MQ=60)
              TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCCGCCTACAGTCTGGCGGAGGGG                                                                                 >  SRR4302540.3376623/1‑94 (MQ=60)
              TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGG                                                                                 >  SRR4302540.4092300/1‑94 (MQ=60)
              TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGG                                                                                 <  SRR4302540.3793930/94‑1 (MQ=60)
              TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGG                                                                                 >  SRR4302540.6492827/1‑94 (MQ=60)
              TGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGG                                                                                 >  SRR4302540.4092299/1‑94 (MQ=60)
               GTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGG                                                                                >  SRR4302540.4391627/1‑94 (MQ=60)
               GTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGG                                                                                >  SRR4302540.7385989/1‑94 (MQ=60)
               GTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGG                                                                                >  SRR4302540.920373/1‑94 (MQ=60)
               GTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGG                                                                                >  SRR4302540.5247758/1‑94 (MQ=60)
                TTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTG                                                                               <  SRR4302540.7465023/94‑1 (MQ=60)
                TTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTG                                                                               <  SRR4302540.9163636/94‑1 (MQ=60)
                 TAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGC                                                                              <  SRR4302540.2580173/94‑1 (MQ=60)
                  AACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCG                                                                             >  SRR4302540.7582170/1‑94 (MQ=60)
                  AACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCG                                                                             <  SRR4302540.5837057/94‑1 (MQ=60)
                    CGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGT                                                                           <  SRR4302540.8489436/94‑1 (MQ=60)
                    CGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGT                                                                           <  SRR4302540.8647377/94‑1 (MQ=60)
                     GACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTA                                                                          <  SRR4302540.443633/94‑1 (MQ=60)
                     GACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTA                                                                          <  SRR4302540.5335996/94‑1 (MQ=60)
                      ACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAA                                                                         <  SRR4302540.6037210/94‑1 (MQ=60)
                       CGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGTAACAGGCAGCCTACAGTCTGGCAGAGTGGTGAGGTAAA                                                                        >  SRR4302540.1837663/1‑94 (MQ=60)
                       CGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTCAT                                                                        >  SRR4302540.5711075/1‑94 (MQ=60)
                       CGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAAT                                                                        >  SRR4302540.3208604/1‑94 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATA                                                                       <  SRR4302540.7243772/94‑1 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATA                                                                       >  SRR4302540.2904807/1‑94 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATA                                                                       <  SRR4302540.9633324/94‑1 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATA                                                                       <  SRR4302540.8682383/94‑1 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATA                                                                       >  SRR4302540.2524510/1‑94 (MQ=60)
                        GCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGAGGTGCGGGAATA                                                                       >  SRR4302540.3013070/1‑94 (MQ=60)
                         CCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATCA                                                                      >  SRR4302540.3723219/1‑94 (MQ=60)
                         CCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAA                                                                      <  SRR4302540.9145711/94‑1 (MQ=60)
                         CCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGCTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAA                                                                      <  SRR4302540.1726466/94‑1 (MQ=60)
                          CACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAA                                                                     >  SRR4302540.4378500/1‑94 (MQ=60)
                          CACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAA                                                                     <  SRR4302540.5039332/94‑1 (MQ=60)
                          CACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAA                                                                     >  SRR4302540.1964784/1‑94 (MQ=60)
                          CACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAA                                                                     >  SRR4302540.7187925/1‑94 (MQ=60)
                           CCCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAT                                                                    <  SRR4302540.6646832/94‑1 (MQ=60)
                           ACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAT                                                                    >  SRR4302540.5710986/1‑94 (MQ=60)
                           ACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAAT                                                                    >  SRR4302540.3832148/1‑94 (MQ=60)
                             CTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTA                                                                  <  SRR4302540.9200508/94‑1 (MQ=60)
                             CTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTA                                                                  <  SRR4302540.5560407/94‑1 (MQ=60)
                             CTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTA                                                                  >  SRR4302540.7932073/1‑94 (MQ=60)
                              TTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAA                                                                 >  SRR4302540.2163812/1‑94 (MQ=60)
                               TCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAA                                                                >  SRR4302540.4314096/1‑94 (MQ=60)
                               TCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAA                                                                <  SRR4302540.88728/94‑1 (MQ=60)
                                CTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAA                                                               >  SRR4302540.2967934/1‑94 (MQ=60)
                                 TATGAAAAATATTACGGCTTTACCCATCAATCCCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAG                                                              <  SRR4302540.3499047/94‑1 (MQ=60)
                                 TATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAG                                                              <  SRR4302540.9232201/94‑1 (MQ=60)
                                 TATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAG                                                              <  SRR4302540.423942/94‑1 (MQ=60)
                                  ATTAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGCAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGA                                                             <  SRR4302540.1410004/94‑1 (MQ=60)
                                  ATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGA                                                             <  SRR4302540.1410001/94‑1 (MQ=60)
                                  ATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGA                                                             <  SRR4302540.1410002/94‑1 (MQ=60)
                                   TGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAA                                                            <  SRR4302540.3321237/94‑1 (MQ=60)
                                   TGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAA                                                            >  SRR4302540.347883/1‑94 (MQ=60)
                                    GAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAG                                                           <  SRR4302540.6731419/94‑1 (MQ=60)
                                     AAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGC                                                          >  SRR4302540.8854235/1‑94 (MQ=60)
                                     AAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGC                                                          >  SRR4302540.1266313/1‑94 (MQ=60)
                                     AAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGC                                                          <  SRR4302540.5007551/94‑1 (MQ=60)
                                     AAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGTGCGGTAATAAATTAAAAGAAGC                                                          >  SRR4302540.5610821/1‑94 (MQ=60)
                                       AAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGA                                                        >  SRR4302540.6814316/1‑94 (MQ=60)
                                        AATATTACGGCTTTACCCGTCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAA                                                       <  SRR4302540.4150052/94‑1 (MQ=60)
                                        AATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAA                                                       <  SRR4302540.9107963/94‑1 (MQ=60)
                                        AATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAA                                                       >  SRR4302540.10080970/1‑94 (MQ=60)
                                         ATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAAT                                                      <  SRR4302540.8059818/94‑1 (MQ=60)
                                          TATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCATCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATT                                                     <  SRR4302540.9917922/94‑1 (MQ=60)
                                           ATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTT                                                    <  SRR4302540.9880320/94‑1 (MQ=60)
                                           ATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTT                                                    >  SRR4302540.2203260/1‑94 (MQ=60)
                                            TTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTG                                                   <  SRR4302540.10138670/94‑1 (MQ=60)
                                              ACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAT                                                 >  SRR4302540.10079096/1‑94 (MQ=60)
                                              ACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAT                                                 <  SRR4302540.7688591/94‑1 (MQ=60)
                                              ACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAT                                                 <  SRR4302540.6089169/94‑1 (MQ=60)
                                              ACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGAT                                                 >  SRR4302540.4159439/1‑94 (MQ=60)
                                               CGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATT                                                <  SRR4302540.3068153/94‑1 (MQ=60)
                                               CGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAACCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATT                                                <  SRR4302540.2348368/94‑1 (MQ=60)
                                                GGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTG                                               <  SRR4302540.4562793/94‑1 (MQ=60)
                                                GGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTG                                               <  SRR4302540.9878780/94‑1 (MQ=60)
                                                GGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGGGCGGTAATAAATTAAAAGAAGCGAATTTGATTG                                               >  SRR4302540.1475792/1‑94 (MQ=60)
                                                 GCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGATTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGC                                              <  SRR4302540.7898492/94‑1 (MQ=60)
                                                 GCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGC                                              >  SRR4302540.5920583/1‑94 (MQ=60)
                                                 GCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGC                                              >  SRR4302540.3093823/1‑94 (MQ=60)
                                                 GCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGC                                              <  SRR4302540.7898490/94‑1 (MQ=60)
                                                  CTTTGCCCATCAATGCCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCG                                             <  SRR4302540.1254532/94‑1 (MQ=60)
                                                  CTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGTGGTAATAAATTAAAAGAAGCGAATTTGATTGCG                                             <  SRR4302540.6623706/94‑1 (MQ=60)
                                                  CTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCG                                             <  SRR4302540.1254531/94‑1 (MQ=60)
                                                  CTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCG                                             >  SRR4302540.5822233/1‑94 (MQ=60)
                                                   TTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGG                                            <  SRR4302540.1683422/94‑1 (MQ=60)
                                                   TTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAACTTGATTGCGG                                            >  SRR4302540.4639455/1‑94 (MQ=60)
                                                    TTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGT                                           <  SRR4302540.4002691/94‑1 (MQ=60)
                                                     TACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTG                                          <  SRR4302540.7251470/94‑1 (MQ=60)
                                                       CCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCC                                        >  SRR4302540.1948543/1‑94 (MQ=60)
                                                       CCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCC                                        >  SRR4302540.6589668/1‑94 (MQ=60)
                                                       CCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGGGGTGCGGTAATAACTTAAAAGAAGCGAATTTGATTGCGGTGCG                                        >  SRR4302540.5170945/1‑94 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGGCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCG                                       <  SRR4302540.6270133/94‑1 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCG                                       <  SRR4302540.2363396/94‑1 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCG                                       >  SRR4302540.1784999/1‑94 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCG                                       <  SRR4302540.5065797/94‑1 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCG                                       <  SRR4302540.357150/94‑1 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGAGGTGCCG                                       >  SRR4302540.7117880/1‑94 (MQ=60)
                                                        CCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACACTCTGGCGGATGTTTGCGGTAATAAATTAACAGAAGCGAATTTTATTGGGCTGCCG                                       >  SRR4302540.1784998/1‑94 (MQ=46)
                                                         CATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGG                                      <  SRR4302540.2809055/94‑1 (MQ=60)
                                                         CATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGG                                      <  SRR4302540.3558751/94‑1 (MQ=60)
                                                          ATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGG                                     <  SRR4302540.9674639/94‑1 (MQ=60)
                                                          ATCAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGG                                     >  SRR4302540.1692010/1‑94 (MQ=60)
                                                            CAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCT                                   <  SRR4302540.9600348/94‑1 (MQ=60)
                                                            CAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCT                                   <  SRR4302540.9600347/94‑1 (MQ=60)
                                                            CAATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCT                                   <  SRR4302540.4684631/94‑1 (MQ=60)
                                                             AATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTG                                  <  SRR4302540.8677207/94‑1 (MQ=60)
                                                              ATACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGT                                 >  SRR4302540.7517927/1‑94 (MQ=60)
                                                               TACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTT                                <  SRR4302540.2029092/94‑1 (MQ=60)
                                                                ACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTA                               <  SRR4302540.291653/94‑1 (MQ=60)
                                                                ACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTA                               <  SRR4302540.2001771/94‑1 (MQ=60)
                                                                ACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTA                               <  SRR4302540.1212476/94‑1 (MQ=60)
                                                                ACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTA                               <  SRR4302540.6882838/94‑1 (MQ=60)
                                                                ACCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGAGGTGCGGTAATAAATTAAAAGAAGAGAATTTGATTGCGCTGCCGGGCTGTTA                               >  SRR4302540.91687/1‑94 (MQ=60)
                                                                 CCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGTCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTAT                              <  SRR4302540.2428766/94‑1 (MQ=60)
                                                                 CCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTAT                              >  SRR4302540.5765558/1‑94 (MQ=60)
                                                                 CCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTAT                              <  SRR4302540.2538496/94‑1 (MQ=60)
                                                                 CCCGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTAT                              <  SRR4302540.3062100/94‑1 (MQ=60)
                                                                  CCGTAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATC                             <  SRR4302540.1586090/94‑1 (MQ=60)
                                                                  CCGGAACTGTAGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATC                             <  SRR4302540.2722409/94‑1 (MQ=60)
                                                                   CGGAGCTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCTGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCC                            <  SRR4302540.5755615/94‑1 (MQ=60)
                                                                   CGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGGGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCC                            >  SRR4302540.373141/1‑94 (MQ=60)
                                                                   CGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCC                            <  SRR4302540.8143882/94‑1 (MQ=60)
                                                                   CGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCC                            <  SRR4302540.6193381/94‑1 (MQ=60)
                                                                   CGGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCC                            <  SRR4302540.1613480/94‑1 (MQ=60)
                                                                    GGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCG                           <  SRR4302540.2302357/94‑1 (MQ=60)
                                                                    GGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCG                           >  SRR4302540.9831677/1‑94 (MQ=60)
                                                                    GGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCG                           >  SRR4302540.3418526/1‑94 (MQ=60)
                                                                    GGAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCG                           <  SRR4302540.961564/94‑1 (MQ=60)
                                                                    GCAACTGTTTGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCG                           <  SRR4302540.961565/94‑1 (MQ=60)
                                                                     GAACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGA                          <  SRR4302540.3896172/94‑1 (MQ=60)
                                                                      AACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGAC                         >  SRR4302540.4554179/1‑94 (MQ=60)
                                                                       ACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACG                        <  SRR4302540.5483373/94‑1 (MQ=60)
                                                                       ACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACG                        >  SRR4302540.2859004/1‑94 (MQ=60)
                                                                       ACTGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACG                        <  SRR4302540.2497163/94‑1 (MQ=60)
                                                                        CTGTTGGAACAGGCAGCCTACAGTCTGGCGGCGGGGTGCGGTTATAAATTAAAAGAAGCGAATTTGATTGCTGTGCCGGGCTGTTATCCGAGGG                       >  SRR4302540.5620528/1‑94 (MQ=60)
                                                                         TGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGccggg                      >  SRR4302540.6587025/1‑89 (MQ=60)
                                                                         TGTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGC                      >  SRR4302540.2587026/1‑94 (MQ=60)
                                                                          GTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCG                     <  SRR4302540.9370222/94‑1 (MQ=60)
                                                                          GTTGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCG                     <  SRR4302540.601301/94‑1 (MQ=60)
                                                                            TGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGC                   <  SRR4302540.9369001/94‑1 (MQ=60)
                                                                            TGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGC                   <  SRR4302540.1398243/94‑1 (MQ=60)
                                                                            TGGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGC                   >  SRR4302540.9072048/1‑94 (MQ=60)
                                                                             GGAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGAAGGGCTGTTATCCGACGGCGGCA                  <  SRR4302540.1864007/94‑1 (MQ=60)
                                                                              GAACAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCAC                 <  SRR4302540.2074130/94‑1 (MQ=60)
                                                                                ACAGACAGCTTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAG               <  SRR4302540.4297870/94‑1 (MQ=60)
                                                                                 CAGGCAGCCTACAGTCTGGCGTAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACACC              >  SRR4302540.7745785/1‑94 (MQ=60)
                                                                                 CAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGC              >  SRR4302540.5836457/1‑94 (MQ=60)
                                                                                 CAGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGC              >  SRR4302540.3366759/1‑94 (MQ=60)
                                                                                  AGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCT             >  SRR4302540.2239707/1‑94 (MQ=60)
                                                                                  AGGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCT             <  SRR4302540.7732896/94‑1 (MQ=60)
                                                                                   GGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTG            <  SRR4302540.4530517/94‑1 (MQ=60)
                                                                                   GGCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTG            <  SRR4302540.6583340/94‑1 (MQ=60)
                                                                                    GCAGCCTACAGTCTGGCGGAGTGGTGCTGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGG           <  SRR4302540.1449117/94‑1 (MQ=60)
                                                                                    GCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGG           <  SRR4302540.4139022/94‑1 (MQ=60)
                                                                                    GCAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGG           <  SRR4302540.8165401/94‑1 (MQ=60)
                                                                                     CAGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGC          <  SRR4302540.7582049/94‑1 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCG         >  SRR4302540.5874644/1‑94 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCG         >  SRR4302540.1995243/1‑94 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCG         >  SRR4302540.1046826/1‑94 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCG         >  SRR4302540.6338060/1‑94 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCG         >  SRR4302540.6338061/1‑94 (MQ=60)
                                                                                      AGCCTACAGTCTGGCGGAGTGGTGCGGGAATAAATTAAAAGGAGCGAATTTGATTGCTGTGCCGTGCTGTTATCCGgagcaggcgcagctgtcg         >  SRR4302540.5874645/1‑76 (MQ=60)
                                                                                       GCCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGC        <  SRR4302540.4823245/94‑1 (MQ=60)
                                                                                        CCTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCT       >  SRR4302540.8184089/1‑94 (MQ=60)
                                                                                        CCTACAGTCTGGCGGAGGGGCGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCT       >  SRR4302540.5536839/1‑94 (MQ=60)
                                                                                         CTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTG      >  SRR4302540.2314042/1‑94 (MQ=60)
                                                                                         CTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTG      <  SRR4302540.7891834/94‑1 (MQ=60)
                                                                                         CTACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTG      >  SRR4302540.8981122/1‑94 (MQ=60)
                                                                                           ACAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAA    >  SRR4302540.3286163/1‑94 (MQ=60)
                                                                                            CAGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAA   <  SRR4302540.8653383/94‑1 (MQ=60)
                                                                                             AGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAAC  <  SRR4302540.5928985/94‑1 (MQ=60)
                                                                                             AGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAAC  >  SRR4302540.1578245/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCCGGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAAC  >  NC_000913/4152886‑4153072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑