Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,173,376 A→G noncoding (44/76 nt) thrT → tRNA‑Thr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,173,3760AG99.7% 1235.3 / ‑5.5 387noncoding (44/76 nt)thrTtRNA‑Thr
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (209/176);  total (209/178)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01

Only 100 of 395 total aligned reads displayed.

CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT  >  NC_000913/4173287‑4173465
                                                                                         |                                                                                         
 aaGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTc                                                                                       <  2:2281233/93‑1 (MQ=255)
 aaGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTc                                                                                       >  1:3954634/1‑93 (MQ=255)
 aaGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTc                                                                                       >  2:795389/1‑93 (MQ=255)
 aaGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTc                                                                                       <  2:3371187/93‑1 (MQ=255)
 aaGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTc                                                                                       >  2:2822404/1‑93 (MQ=255)
     tgatgaTGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCa                                                                                   <  1:3070127/93‑1 (MQ=255)
     tgatgaTGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCa                                                                                   >  2:7563458/1‑93 (MQ=255)
     tgatgaTGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCa                                                                                   <  2:4319144/93‑1 (MQ=255)
      gatgatGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGACATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGAGGGGTCGGCAg                                                                                  >  1:3793786/1‑93 (MQ=255)
       atgatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGt                                                                                 <  2:860958/93‑1 (MQ=255)
        tgatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGtt                                                                                >  1:6074534/1‑93 (MQ=255)
         gatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTc                                                                               >  1:4771717/1‑93 (MQ=255)
          atgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCg                                                                              >  1:179794/1‑93 (MQ=255)
           tgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGa                                                                             >  1:1231126/1‑93 (MQ=255)
           tgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGa                                                                             >  1:5447185/1‑93 (MQ=255)
            gCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGaa                                                                            <  1:5065006/93‑1 (MQ=255)
            gCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGaa                                                                            <  1:5732437/93‑1 (MQ=255)
             cGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAt                                                                           <  1:3441379/93‑1 (MQ=255)
              gggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATc                                                                          <  2:1710721/93‑1 (MQ=255)
              gggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATc                                                                          <  1:5873780/93‑1 (MQ=255)
               ggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCt                                                                         >  2:1547150/1‑93 (MQ=255)
               ggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCt                                                                         >  1:7231500/1‑93 (MQ=255)
                gTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTg                                                                        <  1:9639855/93‑1 (MQ=255)
                 ttCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGc                                                                       >  2:8867685/1‑93 (MQ=255)
                  tCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGcc                                                                      <  1:1169292/93‑1 (MQ=255)
                  tCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGcc                                                                      <  2:2430332/93‑1 (MQ=255)
                    gATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTa                                                                    <  1:5301742/93‑1 (MQ=255)
                    gATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTa                                                                    >  2:5989903/1‑93 (MQ=255)
                    gATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTa                                                                    <  2:3722307/93‑1 (MQ=255)
                       tCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCa                                                                 <  1:3571158/93‑1 (MQ=255)
                       tCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCa                                                                 <  2:7883285/93‑1 (MQ=255)
                          cGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGca                                                              <  1:8709073/93‑1 (MQ=255)
                           gCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcac                                                             <  2:4776696/93‑1 (MQ=255)
                            cTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcacc                                                            <  1:9987236/93‑1 (MQ=255)
                            cTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcacc                                                            >  2:5838507/1‑93 (MQ=255)
                               cccGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCAct                                                         >  2:9210007/1‑93 (MQ=255)
                                 cGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtc                                                       >  1:5511980/1‑93 (MQ=255)
                                  gCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtct                                                      >  2:9486164/1‑93 (MQ=255)
                                  gCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtct                                                      >  1:8865778/1‑93 (MQ=255)
                                   cTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtctt                                                     >  1:3316877/1‑93 (MQ=255)
                                   cTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtctt                                                     >  2:3464273/1‑93 (MQ=255)
                                    tCCTAGATGTGCTGATATAGCTCAGTTGGTAGAGCTCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCttt                                                    <  2:2384881/93‑1 (MQ=255)
                                    tCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCttt                                                    >  2:351396/1‑93 (MQ=255)
                                    tCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCttt                                                    >  1:7656711/1‑93 (MQ=255)
                                     ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   >  1:2422432/1‑93 (MQ=255)
                                     ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   <  2:7734320/93‑1 (MQ=255)
                                     ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   >  2:1869145/1‑93 (MQ=255)
                                      cAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtc                                                  <  1:9812935/93‑1 (MQ=255)
                                      cAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtc                                                  <  2:7319708/93‑1 (MQ=255)
                                        aGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtctc                                                >  2:394192/1‑93 (MQ=255)
                                           tgtgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTctcctc                                             >  1:6912211/1‑93 (MQ=255)
                                            gtgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCtcctcc                                            >  1:1620860/1‑93 (MQ=255)
                                            gtgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCtcctcc                                            >  1:10010212/1‑93 (MQ=255)
                                               cTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTATTTTCTCCTCCCTg                                         <  2:3872967/93‑1 (MQ=255)
                                                 gATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtt                                       >  1:8419816/1‑93 (MQ=255)
                                                 gATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtt                                       >  1:2598547/1‑93 (MQ=255)
                                                   tataGCTCAGTTGTAAGAGCTCACCCTAGGTAAGGGTGGGGTCGGCAATTCGAATCTACCTATCAGCAACACTTCTTTTCTCCTCCCTGtttt                                     <  2:6030135/93‑1 (MQ=255)
                                                   tataGCTCAGTTGGTAGAGCTCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttt                                     <  2:9820255/93‑1 (MQ=255)
                                                   tataGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttt                                     >  2:3125437/1‑93 (MQ=255)
                                                   tataGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttt                                     >  2:6233727/1‑93 (MQ=255)
                                                   tataGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGttct                                     >  1:1453748/1‑91 (MQ=255)
                                                       gCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTcc                                 >  2:522441/1‑93 (MQ=255)
                                                          cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  1:6619378/93‑1 (MQ=255)
                                                          cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              >  1:2303957/1‑93 (MQ=255)
                                                          cAGTTGGTAGAGCGCACCCTTGGNAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  1:4233721/93‑1 (MQ=255)
                                                           aGTTGGTAGAGCGCTCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCt                             <  1:8316774/93‑1 (MQ=255)
                                                           aGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCt                             <  2:9319644/93‑1 (MQ=255)
                                                            gTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTg                            <  2:9038795/93‑1 (MQ=255)
                                                            gTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTg                            <  1:8250216/93‑1 (MQ=255)
                                                               ggTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGttt                         >  2:2942604/1‑93 (MQ=255)
                                                               ggTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGttt                         <  2:7195245/93‑1 (MQ=255)
                                                                gTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTa                        <  2:872293/93‑1 (MQ=255)
                                                                 tAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAt                       >  2:7020733/1‑93 (MQ=255)
                                                                  agagCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAtt                      >  1:2897963/1‑93 (MQ=255)
                                                                  agagCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAtt                      <  1:9206782/93‑1 (MQ=255)
                                                                   gagCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTg                     >  1:1347169/1‑93 (MQ=255)
                                                                     gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   >  1:3171500/1‑93 (MQ=255)
                                                                     gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   <  2:2710057/93‑1 (MQ=255)
                                                                     gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   <  1:7365518/93‑1 (MQ=255)
                                                                     gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   <  1:9081248/93‑1 (MQ=255)
                                                                     gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   <  1:7940278/93‑1 (MQ=255)
                                                                      cgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAt                  <  2:4615341/93‑1 (MQ=255)
                                                                       gcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAtt                 <  2:6343728/93‑1 (MQ=255)
                                                                        cACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATTAGGAGCACTTCTTTTCTCCTCTCTGTTTTTTCTTTCTGTTTATTGGAttt                >  1:2084326/1‑92 (MQ=37)
                                                                         aCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTca               >  2:1361932/1‑93 (MQ=255)
                                                                         aCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTca               >  2:5064797/1‑93 (MQ=255)
                                                                          cccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaa              >  2:6834720/1‑93 (MQ=255)
                                                                          cccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaa              >  2:5544543/1‑93 (MQ=255)
                                                                           ccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaac             <  2:210219/93‑1 (MQ=255)
                                                                            cTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaaca            <  2:5768704/93‑1 (MQ=255)
                                                                             ttGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaacaa           >  1:5212372/1‑93 (MQ=255)
                                                                              tGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAg          <  2:4045991/93‑1 (MQ=255)
                                                                               ggTGAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGt         <  2:109465/93‑1 (MQ=255)
                                                                                gTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTc        >  1:7754860/1‑93 (MQ=255)
                                                                                 tAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCg       >  2:8272287/1‑93 (MQ=255)
                                                                                 tAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCg       <  1:1974233/93‑1 (MQ=255)
                                                                                    gggTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGc    <  2:9113113/93‑1 (MQ=255)
                                                                                    gggTGGGGTCGGCAGTTCGAATCTGCCTAACAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGc    <  1:6398216/93‑1 (MQ=255)
                                                                                     ggTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCa   <  1:8096606/93‑1 (MQ=255)
                                                                                     ggTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCa   <  1:4391810/93‑1 (MQ=255)
                                                                                         |                                                                                         
CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT  >  NC_000913/4173287‑4173465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  >  NC_000913/4173283‑4173469
                                                                                             |                                                                                             
CTTCCAAGTTGAGGATGCGGTTTCGAGTCCCGCTGCCCGCTACAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGA                                                                                               <  SRR4302540.6086814/94‑1 (MQ=59)
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302540.9908021/1‑94 (MQ=60)
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302540.7875010/1‑94 (MQ=60)
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302540.911524/1‑94 (MQ=60)
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGAAAGGGTGG                                                                                               >  SRR4302540.7152389/1‑94 (MQ=60)
 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              >  SRR4302540.5512819/1‑94 (MQ=60)
 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              <  SRR4302540.3148081/94‑1 (MQ=60)
 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              <  SRR4302540.1616289/94‑1 (MQ=60)
   CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGT                                                                                            >  SRR4302540.7966819/1‑94 (MQ=60)
    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCCCCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302540.7299406/1‑94 (MQ=60)
    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302540.3997312/1‑94 (MQ=60)
    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302540.5699425/1‑94 (MQ=60)
    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           <  SRR4302540.1033467/94‑1 (MQ=60)
     AAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCG                                                                                          <  SRR4302540.5642876/94‑1 (MQ=60)
     AAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCGTGGTAAGGGGGGGGTCG                                                                                          >  SRR4302540.7797601/1‑94 (MQ=60)
       GCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGC                                                                                        >  SRR4302540.3496928/1‑94 (MQ=60)
       GCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGC                                                                                        >  SRR4302540.10090224/1‑94 (MQ=60)
        CTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCA                                                                                       <  SRR4302540.4452067/94‑1 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTCAGGGTGGGGGCGGCAG                                                                                      >  SRR4302540.1998126/1‑94 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      >  SRR4302540.4054528/1‑94 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      <  SRR4302540.3103815/94‑1 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      <  SRR4302540.5539628/94‑1 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      <  SRR4302540.1225991/94‑1 (MQ=60)
         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      <  SRR4302540.1225992/94‑1 (MQ=60)
           ATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTT                                                                                    >  SRR4302540.6142082/1‑94 (MQ=60)
            TGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTC                                                                                   >  SRR4302540.4822692/1‑94 (MQ=60)
             GATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCG                                                                                  >  SRR4302540.181582/1‑94 (MQ=60)
              ATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGA                                                                                 >  SRR4302540.1243702/1‑94 (MQ=60)
              ATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGA                                                                                 >  SRR4302540.5507124/1‑94 (MQ=60)
                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302540.5795576/94‑1 (MQ=60)
                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302540.8828646/94‑1 (MQ=60)
                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302540.5119769/94‑1 (MQ=60)
                 CGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATC                                                                              <  SRR4302540.3843649/94‑1 (MQ=60)
                 CGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATC                                                                              <  SRR4302540.3478795/94‑1 (MQ=60)
                 CGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATC                                                                              >  SRR4302540.6822680/1‑94 (MQ=60)
                 CGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATC                                                                              >  SRR4302540.219596/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302540.7312141/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302540.5806704/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302540.5938706/94‑1 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302540.3574709/94‑1 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302540.8289251/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302540.5235511/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302540.5208482/1‑94 (MQ=60)
                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302540.1863113/94‑1 (MQ=60)
                   GGTTCGATTCCCGCTGCCCGCTCCATGATGTGCTGATATAGCTCAGTTGGTAGAGCGCCCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTG                                                                            <  SRR4302540.8196084/94‑1 (MQ=60)
                    GTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGC                                                                           <  SRR4302540.534514/94‑1 (MQ=60)
                    GTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGC                                                                           >  SRR4302540.6568738/1‑94 (MQ=60)
                    GTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGC                                                                           >  SRR4302540.6568731/1‑94 (MQ=60)
                    GTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGC                                                                           <  SRR4302540.9753416/94‑1 (MQ=60)
                     TTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCC                                                                          >  SRR4302540.767186/1‑94 (MQ=60)
                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         >  SRR4302540.9354745/1‑94 (MQ=60)
                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         >  SRR4302540.8220711/1‑94 (MQ=60)
                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302540.1181402/94‑1 (MQ=60)
                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302540.7779239/94‑1 (MQ=60)
                       CGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTA                                                                        >  SRR4302540.974047/1‑94 (MQ=60)
                       CGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTA                                                                        <  SRR4302540.6851487/94‑1 (MQ=60)
                        GATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTAT                                                                       <  SRR4302540.5359753/94‑1 (MQ=60)
                         ATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATC                                                                      >  SRR4302540.9558380/1‑94 (MQ=60)
                         ATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATC                                                                      >  SRR4302540.3326507/1‑94 (MQ=60)
                           TCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAG                                                                    <  SRR4302540.3610166/94‑1 (MQ=60)
                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   >  SRR4302540.8647229/1‑94 (MQ=60)
                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   >  SRR4302540.3764000/1‑94 (MQ=60)
                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   <  SRR4302540.1979437/94‑1 (MQ=60)
                             CCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCA                                                                  >  SRR4302540.5829897/1‑94 (MQ=60)
                             CCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCA                                                                  <  SRR4302540.7874048/94‑1 (MQ=60)
                              CGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCAC                                                                 >  SRR4302540.7324129/1‑94 (MQ=60)
                              CGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCAC                                                                 <  SRR4302540.8810165/94‑1 (MQ=60)
                              CGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCAC                                                                 >  SRR4302540.3802346/1‑94 (MQ=60)
                               GCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACC                                                                <  SRR4302540.907566/94‑1 (MQ=60)
                               GCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACC                                                                >  SRR4302540.5839165/1‑94 (MQ=60)
                               GCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACC                                                                >  SRR4302540.4908760/1‑94 (MQ=60)
                                CTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCA                                                               >  SRR4302540.8122648/1‑94 (MQ=60)
                                CTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCA                                                               <  SRR4302540.10103661/94‑1 (MQ=60)
                                CTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCA                                                               <  SRR4302540.9898066/94‑1 (MQ=60)
                                 TGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCAC                                                              <  SRR4302540.345446/94‑1 (MQ=60)
                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTCTCTGCACCACTT                                                            >  SRR4302540.2514809/1‑94 (MQ=60)
                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGAAGTTCGAATCTGCCTATCAGCAACACTT                                                            >  SRR4302540.8516105/1‑94 (MQ=60)
                                    CCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTC                                                           >  SRR4302540.7310791/1‑94 (MQ=60)
                                    CCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTC                                                           >  SRR4302540.5572686/1‑94 (MQ=60)
                                    CCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTC                                                           >  SRR4302540.5326701/1‑94 (MQ=60)
                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          <  SRR4302540.3967875/94‑1 (MQ=60)
                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          >  SRR4302540.6307702/1‑94 (MQ=60)
                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          >  SRR4302540.8968370/1‑94 (MQ=60)
                                      GCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTT                                                         >  SRR4302540.3353246/1‑94 (MQ=60)
                                       CTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        >  SRR4302540.7742919/1‑94 (MQ=60)
                                       CTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        <  SRR4302540.7335754/94‑1 (MQ=60)
                                       CTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        <  SRR4302540.6214933/94‑1 (MQ=60)
                                        TCTAAGATGTGTTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGTAGTTCGAATtttcttactctcaccatttctttt                                                       >  SRR4302540.9097239/1‑70 (MQ=39)
                                        TCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTT                                                       >  SRR4302540.2448531/1‑94 (MQ=60)
                                        TCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTT                                                       >  SRR4302540.2290747/1‑94 (MQ=60)
                                        TCCAAGATGTGCTGATATAGATCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGGTCGAATCTGACTATCAGCACCACTTCTTTT                                                       >  SRR4302540.2079644/1‑94 (MQ=60)
                                         CCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTC                                                      <  SRR4302540.5402184/94‑1 (MQ=60)
                                         CCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTC                                                      >  SRR4302540.2484676/1‑94 (MQ=60)
                                         CCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGATCGAATCTGCCTATCAGCACCACTTCTTTTC                                                      >  SRR4302540.9771853/1‑94 (MQ=60)
                                          CAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCT                                                     <  SRR4302540.9927777/94‑1 (MQ=60)
                                          CAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCT                                                     >  SRR4302540.2329951/1‑94 (MQ=60)
                                           AAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTC                                                    >  SRR4302540.5038509/1‑94 (MQ=60)
                                           AAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTC                                                    >  SRR4302540.1346823/1‑94 (MQ=60)
                                           AAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTC                                                    >  SRR4302540.2024474/1‑94 (MQ=60)
                                            AGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGCGGGGTCGGCAGTTAGAATCTGCCTATCAGCGCCACTTCTTTTCTCC                                                   >  SRR4302540.7460223/1‑94 (MQ=60)
                                             GATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCT                                                  <  SRR4302540.328333/94‑1 (MQ=60)
                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 >  SRR4302540.6097308/1‑94 (MQ=60)
                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 <  SRR4302540.7545187/94‑1 (MQ=60)
                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 >  SRR4302540.6989129/1‑94 (MQ=60)
                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGCCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 <  SRR4302540.8358045/94‑1 (MQ=60)
                                              ATGTGCTGATATAGATCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 <  SRR4302540.1179066/94‑1 (MQ=60)
                                               TGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCC                                                >  SRR4302540.10126774/1‑94 (MQ=60)
                                               TGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCC                                                >  SRR4302540.1638627/1‑94 (MQ=60)
                                                GTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCC                                               <  SRR4302540.1543234/94‑1 (MQ=60)
                                                GTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCC                                               >  SRR4302540.1235468/1‑94 (MQ=60)
                                                GTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCC                                               <  SRR4302540.1543230/94‑1 (MQ=60)
                                                 TGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCT                                              <  SRR4302540.4218200/94‑1 (MQ=60)
                                                 TGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCT                                              <  SRR4302540.3008512/94‑1 (MQ=60)
                                                  GCTGATATAGCTCAGTTGGTAGAGCGCAACCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTG                                             <  SRR4302540.5378630/94‑1 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302540.806773/1‑94 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            <  SRR4302540.5532486/94‑1 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            <  SRR4302540.8850594/94‑1 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            <  SRR4302540.1660976/94‑1 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302540.10043847/1‑94 (MQ=60)
                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGGGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302540.8592745/1‑94 (MQ=60)
                                                   CTGACATAGCTCAGCTGGTAGAGCGCACCCTTGGTTAGTGTTGGGTCGGTAGTTCGAATCTGCTTATCTGCACCACTTCTTCTTTCCTCCCCGT                                            >  SRR4302540.7755249/1‑94 (MQ=22)
                                                    TGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTT                                           >  SRR4302540.8517548/1‑94 (MQ=60)
                                                    TGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTT                                           <  SRR4302540.8945845/94‑1 (MQ=60)
                                                    TGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTT                                           >  SRR4302540.1419555/1‑94 (MQ=60)
                                                     GATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTT                                          >  SRR4302540.3129107/1‑94 (MQ=60)
                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTT                                         >  SRR4302540.1744522/1‑94 (MQ=60)
                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTCT                                         >  SRR4302540.1469560/1‑94 (MQ=60)
                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGATCGAATCTGCCTATCACCACCACTTCTTTTCTCCTCCCTGTTTT                                         >  SRR4302540.1805706/1‑94 (MQ=60)
                                                        ATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTT                                       <  SRR4302540.2918474/94‑1 (MQ=60)
                                                         TAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTC                                      >  SRR4302540.1264780/1‑94 (MQ=60)
                                                         TAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTC                                      >  SRR4302540.8503528/1‑94 (MQ=60)
                                                          AGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCC                                     >  SRR4302540.6696185/1‑94 (MQ=60)
                                                          AGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCC                                     >  SRR4302540.3920350/1‑94 (MQ=60)
                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGTGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   <  SRR4302540.5991732/94‑1 (MQ=60)
                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302540.1312074/1‑94 (MQ=60)
                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302540.7380644/1‑94 (MQ=60)
                                                             TCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTC                                  >  SRR4302540.8177437/1‑94 (MQ=60)
                                                             TCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTC                                  >  SRR4302540.2415857/1‑94 (MQ=60)
                                                             TCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTC                                  <  SRR4302540.5189017/94‑1 (MQ=60)
                                                             TCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTC                                  >  SRR4302540.2328748/1‑94 (MQ=60)
                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302540.6692674/94‑1 (MQ=60)
                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 >  SRR4302540.7870444/1‑94 (MQ=60)
                                                              CAGTTGGTAGAGCGCACCCTTGGNAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302540.4279793/94‑1 (MQ=60)
                                                               AGTTGGTAGAGCGCTCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTG                                <  SRR4302540.8413319/94‑1 (MQ=60)
                                                               AGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTG                                >  SRR4302540.2178781/1‑94 (MQ=60)
                                                               AGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTG                                <  SRR4302540.8737364/94‑1 (MQ=60)
                                                                GTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGT                               <  SRR4302540.8346113/94‑1 (MQ=60)
                                                                  TGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTT                             >  SRR4302540.8362060/1‑94 (MQ=60)
                                                                    GTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAT                           >  SRR4302540.3378521/1‑94 (MQ=60)
                                                                    GTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAT                           <  SRR4302540.9273724/94‑1 (MQ=60)
                                                                    GTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAT                           >  SRR4302540.1577090/1‑94 (MQ=60)
                                                                     TAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATT                          >  SRR4302540.2929574/1‑94 (MQ=60)
                                                                      AGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTG                         >  SRR4302540.1872884/1‑94 (MQ=60)
                                                                      AGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTG                         >  SRR4302540.1361319/1‑94 (MQ=60)
                                                                      AGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTG                         <  SRR4302540.9317259/94‑1 (MQ=60)
                                                                       GAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGC                        >  SRR4302540.1447427/1‑94 (MQ=60)
                                                                       GAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGC                        >  SRR4302540.2549653/1‑94 (MQ=60)
                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCTCTTCTTTTGTGCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       >  SRR4302540.2486395/1‑94 (MQ=60)
                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       >  SRR4302540.4152949/1‑94 (MQ=60)
                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       >  SRR4302540.3205975/1‑94 (MQ=60)
                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       <  SRR4302540.5424703/94‑1 (MQ=60)
                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       >  SRR4302540.3205976/1‑94 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.9190344/94‑1 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.9190345/94‑1 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.9216905/94‑1 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.7447640/94‑1 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.8032812/94‑1 (MQ=60)
                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302540.7670941/94‑1 (MQ=60)
                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATT                     >  SRR4302540.4370831/1‑94 (MQ=60)
                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATT                     <  SRR4302540.3716009/94‑1 (MQ=60)
                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATT                     <  SRR4302540.565034/94‑1 (MQ=60)
                                                                           GCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATTAGGAGCACTTCTTTTCTCCTCTCTGTTTTTTCTTTCTGTTTATTGgattt                    >  SRR4302540.2106715/1‑89 (MQ=60)
                                                                           GCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTC                    >  SRR4302540.3061784/1‑94 (MQ=60)
                                                                            CACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCA                   <  SRR4302540.3605673/94‑1 (MQ=60)
                                                                             ACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAA                  >  SRR4302540.3027243/1‑94 (MQ=60)
                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAA               >  SRR4302540.2355475/1‑94 (MQ=60)
                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAA               >  SRR4302540.5269169/1‑94 (MQ=60)
                                                                                   GGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTC            <  SRR4302540.27980/94‑1 (MQ=60)
                                                                                   GGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTC            <  SRR4302540.4623139/94‑1 (MQ=60)
                                                                                    GTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCG           <  SRR4302540.9531375/94‑1 (MQ=60)
                                                                                    GTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCG           >  SRR4302540.4483161/1‑94 (MQ=60)
                                                                                    GTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCG           <  SRR4302540.4432080/94‑1 (MQ=60)
                                                                                      AAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGG         <  SRR4302540.6399341/94‑1 (MQ=60)
                                                                                      AAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGG         >  SRR4302540.3423413/1‑94 (MQ=60)
                                                                                        GGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCA       <  SRR4302540.6469447/94‑1 (MQ=60)
                                                                                        GGGTGGGGTCGGCAGTTCGAATCTGCCTAACAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCA       <  SRR4302540.6469446/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.8190583/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.6092565/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.5276731/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.2713978/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.4439471/94‑1 (MQ=60)
                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302540.3148245/94‑1 (MQ=60)
                                                                                           TGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGT    >  SRR4302540.1469958/1‑94 (MQ=60)
                                                                                           TGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGT    <  SRR4302540.2989818/94‑1 (MQ=60)
                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTT   <  SRR4302540.6311679/94‑1 (MQ=60)
                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTT   >  SRR4302540.9716651/1‑94 (MQ=60)
                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTT   <  SRR4302540.3138147/94‑1 (MQ=60)
                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGGTTTTTCCTTCTGTTTATTGCATTCTACTAGTCGGGCATGTT   >  SRR4302540.9030993/1‑94 (MQ=60)
                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  <  SRR4302540.3435245/94‑1 (MQ=60)
                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  <  SRR4302540.6656139/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  >  NC_000913/4173283‑4173469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑