Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,185,074	A→G	Q716R (CAG→CGG)	rpoC →	RNA polymerase beta prime subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,185,074	0	A	G	99.5%	1280.1 / NA	401	Q716R (CAG→CGG)	rpoC	RNA polymerase beta prime subunit
Reads supporting (aligned to +/- strand): ref base A (1/0); major base G (184/214); minor base T (0/2); total (185/216)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 417 total aligned reads displayed.

GGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTC  >  NC_000913/4184984‑4185163

 ggCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGt                                                                                        >  1:4830583/1‑93 (MQ=255)

    tGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTc                                                                                     >  1:1895672/1‑93 (MQ=255)

    tGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTc                                                                                     >  1:640845/1‑93 (MQ=255)

     gcggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTcc                                                                                    <  2:8720615/93‑1 (MQ=255)

     gcggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTcc                                                                                    >  2:9410413/1‑93 (MQ=255)

      cggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCt                                                                                   <  1:2090259/93‑1 (MQ=255)

      cggcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCt                                                                                   <  2:8356143/93‑1 (MQ=255)

        gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTc                                                                                 >  2:5427092/1‑93 (MQ=255)

        gcgAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGGCAGGAAGAGAAGCGGGTTTCCTTc                                                                                 <  2:7051527/93‑1 (MQ=255)

          gAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCaa                                                                               >  1:8589259/1‑93 (MQ=255)

           aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                                              >  1:10020099/1‑93 (MQ=255)

           aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                                              <  2:4702547/93‑1 (MQ=255)

           aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                                              <  2:8246545/93‑1 (MQ=255)

           aaCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAc                                                                              <  2:5035685/93‑1 (MQ=255)

            aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa                                                                             <  1:2418829/93‑1 (MQ=255)

            aCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACa                                                                             <  2:3839427/93‑1 (MQ=255)

              gATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc                                                                           <  2:7589528/93‑1 (MQ=255)

              gATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGc                                                                           >  2:6685912/1‑93 (MQ=255)

               aTCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCa                                                                          >  2:3972093/1‑93 (MQ=255)

                tCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAt                                                                         <  2:4848863/93‑1 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAATCTGAAACCGTGATTAGCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      <  1:5565706/93‑1 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      >  1:4135648/1‑93 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      >  2:8197763/1‑93 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      <  2:20824/93‑1 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      >  2:1740529/1‑93 (MQ=255)

                   tgtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTa                                                                      <  2:8412495/93‑1 (MQ=255)

                    gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                                     <  1:110180/93‑1 (MQ=255)

                    gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                                     >  1:4417213/1‑93 (MQ=255)

                    gtATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAc                                                                     <  1:7362877/93‑1 (MQ=255)

                     tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa                                                                    >  1:6149803/1‑93 (MQ=255)

                     tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa                                                                    >  1:6875653/1‑93 (MQ=255)

                     tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACa                                                                    <  1:4013355/93‑1 (MQ=255)

                        ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                                 <  2:7295192/93‑1 (MQ=255)

                        ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                                 <  2:1782773/93‑1 (MQ=255)

                        ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                                 >  2:6143414/1‑93 (MQ=255)

                        ccAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatga                                                                 <  2:6262453/93‑1 (MQ=255)

                         cAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACatgat                                                                <  1:9820074/93‑1 (MQ=255)

                           aaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATgg                                                              <  1:5296641/93‑1 (MQ=255)

                           aaGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATgg                                                              >  1:8061164/1‑93 (MQ=255)

                              cGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCg                                                           <  1:9408398/93‑1 (MQ=255)

                                  gatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTc                                                       >  1:3363580/1‑93 (MQ=255)

                                  gatgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGCACGACTc                                                       >  1:1452333/1‑93 (MQ=255)

                                    tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCg                                                     >  2:1881850/1‑93 (MQ=255)

                                    tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCg                                                     >  2:6388072/1‑93 (MQ=255)

                                    tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCg                                                     >  2:4425106/1‑93 (MQ=255)

                                    tgGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGACTCCg                                                     >  2:92756/1‑93 (MQ=255)

                                     ggATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCgg                                                    >  1:2905230/1‑93 (MQ=255)

                                      gATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCggg                                                   >  2:7988779/1‑92 (MQ=255)

                                       aTAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTg                                                  >  1:2205003/1‑93 (MQ=255)

                                           ccTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGcgcg                                              >  1:9628638/1‑93 (MQ=255)

                                           ccTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGACAAGCTGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGcgcg                                              <  1:3224009/93‑1 (MQ=255)

                                            cTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGt                                             <  1:7182617/93‑1 (MQ=255)

                                            cTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGt                                             <  2:4112111/93‑1 (MQ=255)

                                            cTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGt                                             >  1:5662553/1‑93 (MQ=255)

                                            cTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGt                                             >  2:5239648/1‑93 (MQ=255)

                                              gCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTgg                                           <  1:6626528/93‑1 (MQ=255)

                                                  aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATTTACATGATGGCCGACTTCGGTGCGCGTGGTTCt                                       >  1:8983686/1‑93 (MQ=255)

                                                  aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCt                                       <  1:4629208/93‑1 (MQ=255)

                                                  aCTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCt                                       <  1:2767058/93‑1 (MQ=255)

                                                   ctaaaaCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTg                                      <  2:4305608/90‑1 (MQ=255)

                                                     gAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCg                                    >  2:2843464/1‑93 (MQ=255)

                                                     gAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCg                                    >  2:9537630/1‑93 (MQ=255)

                                                        aCCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGca                                 <  1:1028881/93‑1 (MQ=255)

                                                            tGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAgc                             >  2:3604999/1‑92 (MQ=255)

                                                            tGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGa                             <  2:1631853/93‑1 (MQ=255)

                                                             gATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAt                            <  1:9379703/93‑1 (MQ=255)

                                                             gATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAt                            <  2:5661236/93‑1 (MQ=255)

                                                               ttAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTc                          >  1:8776918/1‑93 (MQ=255)

                                                               atAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTc                          <  1:3127586/92‑1 (MQ=255)

                                                                tAACCGTGATGGTCAGGAAGAGGAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTct                         >  2:9827155/1‑92 (MQ=255)

                                                                tAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCg                         >  1:4983742/1‑93 (MQ=255)

                                                                 aaCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGt                        <  2:2761957/93‑1 (MQ=255)

                                                                   ccGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCa                      <  2:2653466/93‑1 (MQ=255)

                                                                   ccGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCa                      <  1:3700097/93‑1 (MQ=255)

                                                                   ccGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCCTGGTTCTGCGGACCAGAGTCGTCa                      >  2:3410854/1‑93 (MQ=255)

                                                                    cGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAg                     >  2:7841491/1‑93 (MQ=255)

                                                                     gTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGc                    >  2:10040622/1‑93 (MQ=255)

                                                                     gTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGc                    <  2:6828686/93‑1 (MQ=255)

                                                                      tGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCt                   <  1:1401060/93‑1 (MQ=255)

                                                                      tGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCt                   <  1:2661223/93‑1 (MQ=255)

                                                                        atggTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTg                 >  1:5104503/3‑93 (MQ=255)

                                                                         tggTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGc                <  1:3561556/92‑1 (MQ=255)

                                                                          ggTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCt               >  2:7629617/1‑93 (MQ=255)

                                                                          ggTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCt               <  2:1122360/93‑1 (MQ=255)

                                                                          ggTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCCACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCt               <  2:8847544/93‑1 (MQ=255)

                                                                           gTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTg              >  2:2203357/1‑93 (MQ=255)

                                                                            tCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTgg             <  1:8245433/93‑1 (MQ=255)

                                                                            tCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTgg             >  1:7671168/1‑93 (MQ=255)

                                                                            gcAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTgg             <  1:7830906/92‑1 (MQ=255)

                                                                              aGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTa           <  1:3819299/93‑1 (MQ=255)

                                                                              aGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTa           <  2:3150715/93‑1 (MQ=255)

                                                                               ggAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAt          >  1:9170248/1‑93 (MQ=255)

                                                                                gAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATg         <  1:6771588/93‑1 (MQ=255)

                                                                                  agagAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCg       >  2:1337767/1‑93 (MQ=255)

                                                                                  agagAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCg       >  1:124564/1‑93 (MQ=255)

                                                                                    agaAGCGTGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTg     <  1:8496318/93‑1 (MQ=255)

                                                                                    agaAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTg     <  2:5570971/93‑1 (MQ=255)

                                                                                     gaAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTgg    <  1:9103828/93‑1 (MQ=255)

                                                                                       aGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTc  <  2:738323/93‑1 (MQ=255)

                                                                                       aGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTc  <  2:9088613/93‑1 (MQ=255)

GGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTC  >  NC_000913/4184984‑4185163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 234 total aligned reads displayed.

TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  >  NC_000913/4184981‑4185167

TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                                               <  SRR4302540.7286370/94‑1 (MQ=60)

TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                                               <  SRR4302540.1340800/94‑1 (MQ=60)

TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                                               <  SRR4302540.4543925/94‑1 (MQ=60)

ACTGGCCTGCGGCGAACGATCGTGTATCCAAAGCCATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCG                                                                                               <  SRR4302540.7286369/94‑1 (MQ=60)

 CTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGG                                                                                              <  SRR4302540.8478434/94‑1 (MQ=60)

   GGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGT                                                                                            >  SRR4302540.4882325/1‑94 (MQ=60)

    GGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTT                                                                                           <  SRR4302540.1399932/94‑1 (MQ=60)

      CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                                         >  SRR4302540.1916415/1‑94 (MQ=60)

      CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                                         <  SRR4302540.6259034/94‑1 (MQ=60)

      CTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTC                                                                                         >  SRR4302540.647674/1‑94 (MQ=60)

       TGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCC                                                                                        <  SRR4302540.3414629/94‑1 (MQ=60)

       TGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCC                                                                                        <  SRR4302540.6794155/94‑1 (MQ=60)

        GCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCT                                                                                       <  SRR4302540.4453237/94‑1 (MQ=60)

        GCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCT                                                                                       <  SRR4302540.9241008/94‑1 (MQ=60)

         CGGCGAACGATCGTGTATCCAACGCGATGATGGATAACCTGCAAACTGAAACCGTGATTACCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT                                                                                      <  SRR4302540.9071531/94‑1 (MQ=60)

         CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT                                                                                      <  SRR4302540.2345202/94‑1 (MQ=60)

         CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT                                                                                      <  SRR4302540.2112711/94‑1 (MQ=60)

         CGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTT                                                                                      <  SRR4302540.2112710/94‑1 (MQ=60)

          GGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTC                                                                                     >  SRR4302540.906688/1‑94 (MQ=60)

          GGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTC                                                                                     <  SRR4302540.8198525/94‑1 (MQ=60)

           GCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCA                                                                                    >  SRR4302540.4571878/1‑94 (MQ=60)

           GCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCA                                                                                    <  SRR4302540.5037119/94‑1 (MQ=60)

            CGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAA                                                                                   >  SRR4302540.4819131/1‑94 (MQ=60)

            CGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAA                                                                                   >  SRR4302540.8689108/1‑94 (MQ=60)

             GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGNANGAGNAGCGGGTTTNCTTanan                                                                                  >  SRR4302540.8440775/1‑90 (MQ=60)

             GAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAAC                                                                                  >  SRR4302540.10136717/1‑94 (MQ=60)

              AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                                 <  SRR4302540.2447041/94‑1 (MQ=60)

              AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                                 >  SRR4302540.8768615/1‑94 (MQ=60)

              AACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACA                                                                                 <  SRR4302540.978851/94‑1 (MQ=60)

               actaatgtgtatcacaagggattattgatacCCTGCAAACTGAAACCGTGATTAGCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG                                                                                <  SRR4302540.2444902/63‑1 (MQ=60)

               ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCCACAG                                                                                >  SRR4302540.741246/1‑94 (MQ=60)

               ACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAG                                                                                <  SRR4302540.2444903/94‑1 (MQ=60)

                CGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGC                                                                               >  SRR4302540.7889533/1‑94 (MQ=60)

                 GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA                                                                              <  SRR4302540.6724426/94‑1 (MQ=60)

                 GATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCA                                                                              >  SRR4302540.958908/1‑94 (MQ=60)

                  ATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAT                                                                             >  SRR4302540.1049012/1‑94 (MQ=60)

                  ATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGGGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCAT                                                                             >  SRR4302540.510638/1‑94 (MQ=60)

                   TCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATC                                                                            <  SRR4302540.1039940/94‑1 (MQ=60)

                    CGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCT                                                                           <  SRR4302540.3199760/94‑1 (MQ=60)

                     GTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTA                                                                          >  SRR4302540.4370304/1‑94 (MQ=60)

                     GTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTA                                                                          >  SRR4302540.4180394/1‑94 (MQ=60)

                     GTGGATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGGTTCCTTCAACCGCATATA                                                                          >  SRR4302540.8669664/1‑94 (MQ=60)

                      TGTATCCAAAGCGATGATGGATAACCTGCAATCTGAAACCGTGATTAGCCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                                         <  SRR4302540.5626995/94‑1 (MQ=60)

                      TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                                         <  SRR4302540.4117873/94‑1 (MQ=60)

                      TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                                         >  SRR4302540.4465075/1‑94 (MQ=60)

                      TGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTAC                                                                         >  SRR4302540.570540/1‑94 (MQ=60)

                      TGTATCCAAAGCGATGATGGAAAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGCGAAGCGGGTTTGTGTCAACAGCATCTAC                                                                         >  SRR4302540.4499154/1‑94 (MQ=60)

                       GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                                        >  SRR4302540.6951856/1‑94 (MQ=60)

                       GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                                        <  SRR4302540.111354/94‑1 (MQ=60)

                       GTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACA                                                                        <  SRR4302540.7444977/94‑1 (MQ=60)

                        TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                                       <  SRR4302540.4056582/94‑1 (MQ=60)

                        TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                                       <  SRR4302540.10164073/94‑1 (MQ=60)

                        TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                                       >  SRR4302540.9842956/1‑94 (MQ=60)

                        TATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACAT                                                                       <  SRR4302540.4955695/94‑1 (MQ=60)

                           CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT                                                                    <  SRR4302540.3891131/94‑1 (MQ=60)

                           CCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGAT                                                                    <  SRR4302540.6060031/94‑1 (MQ=60)

                            CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                                   <  SRR4302540.3857347/94‑1 (MQ=60)

                            CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                                   <  SRR4302540.3825780/94‑1 (MQ=60)

                            CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                                   <  SRR4302540.9934974/94‑1 (MQ=60)

                            CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                                   <  SRR4302540.9356917/94‑1 (MQ=60)

                            CAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATG                                                                   >  SRR4302540.10139637/1‑94 (MQ=60)

                             AAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGG                                                                  >  SRR4302540.8154739/1‑94 (MQ=60)

                              AAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGC                                                                 <  SRR4302540.9818844/94‑1 (MQ=60)

                              AAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGC                                                                 <  SRR4302540.5354579/94‑1 (MQ=60)

                               AGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCC                                                                <  SRR4302540.6258632/94‑1 (MQ=60)

                                 CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                                              <  SRR4302540.9520281/94‑1 (MQ=60)

                                 CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                                              >  SRR4302540.2879983/1‑94 (MQ=60)

                                 CGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGA                                                              >  SRR4302540.3986536/1‑94 (MQ=60)

                                   ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                                            >  SRR4302540.8023357/1‑94 (MQ=60)

                                   ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                                            >  SRR4302540.8446632/1‑94 (MQ=60)

                                   ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                                            <  SRR4302540.5695583/94‑1 (MQ=60)

                                   ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                                            >  SRR4302540.3024274/1‑94 (MQ=60)

                                   ATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACT                                                            <  SRR4302540.5448765/94‑1 (MQ=60)

                                    TGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTC                                                           >  SRR4302540.3400390/1‑94 (MQ=60)

                                    TGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGCACGACTC                                                           >  SRR4302540.1468128/1‑94 (MQ=60)

                                       TGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGG                                                        >  SRR4302540.2936945/1‑94 (MQ=60)

                                       TGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGG                                                        >  SRR4302540.9226696/1‑94 (MQ=60)

                                       TGGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGG                                                        <  SRR4302540.1680733/94‑1 (MQ=60)

                                        GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT                                                       >  SRR4302540.861335/1‑94 (MQ=60)

                                        GGATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGT                                                       <  SRR4302540.214692/94‑1 (MQ=60)

                                         GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG                                                      >  SRR4302540.2228824/1‑94 (MQ=60)

                                         GATAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTG                                                      >  SRR4302540.2226712/1‑94 (MQ=60)

                                           AAACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCG                                                    <  SRR4302540.7883040/94‑1 (MQ=60)

                                            AACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGC                                                   >  SRR4302540.885108/1‑94 (MQ=60)

                                             ACCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCG                                                  >  SRR4302540.9742102/1‑94 (MQ=60)

                                              CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGT                                                 >  SRR4302540.5724906/1‑94 (MQ=60)

                                              CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGG                                                 >  SRR4302540.1964103/1‑94 (MQ=60)

                                              CCTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGACAAGCTGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGT                                                 <  SRR4302540.3259055/94‑1 (MQ=60)

                                               CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                                                <  SRR4302540.7262693/94‑1 (MQ=60)

                                               CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                                                >  SRR4302540.1932788/1‑94 (MQ=60)

                                               CTGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTG                                                <  SRR4302540.1207608/94‑1 (MQ=60)

                                                TGCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGG                                               >  SRR4302540.7494093/1‑94 (MQ=60)

                                                 ggacactgcaacggtgcgtaacagtgatGGTCAGGAAGAGAAGGGGGTTTCCTTGAACGGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                                              <  SRR4302540.4924019/66‑1 (MQ=60)

                                                 GCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                                              <  SRR4302540.6699888/94‑1 (MQ=60)

                                                 GCAAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGT                                              <  SRR4302540.1874977/94‑1 (MQ=60)

                                                   AAACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                                            <  SRR4302540.7691979/94‑1 (MQ=60)

                                                   AAACTGAAACCGTGATCAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTC                                            >  SRR4302540.9629713/1‑94 (MQ=60)

                                                    AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATTTACATGATGGCCGACTTCGGTGCGCGTGGTTCT                                           >  SRR4302540.9090888/1‑94 (MQ=60)

                                                    AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCT                                           <  SRR4302540.4764931/94‑1 (MQ=60)

                                                    AACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCT                                           <  SRR4302540.3683294/94‑1 (MQ=60)

                                                     ACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTG                                          <  SRR4302540.4678795/94‑1 (MQ=60)

                                                     ACTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTG                                          <  SRR4302540.3817565/94‑1 (MQ=60)

                                                      CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGG                                         >  SRR4302540.4073795/1‑94 (MQ=60)

                                                      CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGC                                         <  SRR4302540.14616/94‑1 (MQ=60)

                                                      CTGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGC                                         <  SRR4302540.7377362/94‑1 (MQ=60)

                                                       TGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG                                        <  SRR4302540.3630476/94‑1 (MQ=60)

                                                       TGAAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCG                                        >  SRR4302540.3151417/1‑94 (MQ=60)

                                                         AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGC                                      >  SRR4302540.6027118/1‑94 (MQ=60)

                                                         AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGC                                      >  SRR4302540.2912762/1‑94 (MQ=60)

                                                         AAACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGCTTCTGCCGC                                      >  SRR4302540.3688043/1‑94 (MQ=60)

                                                          ACCCGTGACTAACCGTGATGGCCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGCCTCCGGTGCGCGTGGTTCTGCGGCA                                     <  SRR4302540.9270639/94‑1 (MQ=60)

                                                           ACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCAC                                    >  SRR4302540.7117524/1‑94 (MQ=60)

                                                           ACCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCAC                                    <  SRR4302540.4071493/94‑1 (MQ=60)

                                                            CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                                   <  SRR4302540.9588806/94‑1 (MQ=60)

                                                            CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                                   >  SRR4302540.9312708/1‑94 (MQ=60)

                                                            CCGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACA                                   <  SRR4302540.3260038/94‑1 (MQ=60)

                                                            CCGGGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGACCGACTCCGGTGCGCGTGGTTCTGCGGCACA                                   <  SRR4302540.3260036/94‑1 (MQ=60)

                                                             CGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAG                                  <  SRR4302540.829659/94‑1 (MQ=60)

                                                             CGTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAG                                  >  SRR4302540.6306105/1‑94 (MQ=60)

                                                              GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA                                 <  SRR4302540.2764056/94‑1 (MQ=60)

                                                              GTGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGA                                 >  SRR4302540.130078/1‑94 (MQ=60)

                                                               TGATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAT                                >  SRR4302540.6650699/1‑94 (MQ=60)

                                                                GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT                               <  SRR4302540.9491355/94‑1 (MQ=60)

                                                                GATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATT                               <  SRR4302540.9491630/94‑1 (MQ=60)

                                                                 ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCAGGTGCGCGTGGTTCTGCGGCACAGATTC                              >  SRR4302540.5423401/1‑94 (MQ=60)

                                                                 ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC                              >  SRR4302540.8878572/1‑94 (MQ=60)

                                                                 ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC                              >  SRR4302540.2217377/1‑94 (MQ=60)

                                                                 ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTC                              >  SRR4302540.2746843/1‑94 (MQ=60)

                                                                 ATTAACCGTGATGGTCAGGAAGAGAAGCGGGTTCACTTACACAGCATCTACATGATGGCCGACTACGGTGgccgcggttatgcgacacaatttg                              >  SRR4302540.2746844/1‑70 (MQ=32)

                                                                  TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG                             >  SRR4302540.8189401/1‑94 (MQ=60)

                                                                  TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG                             >  SRR4302540.5037696/1‑94 (MQ=60)

                                                                  TTAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG                             <  SRR4302540.105008/94‑1 (MQ=60)

                                                                  ATAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCG                             <  SRR4302540.3161732/94‑1 (MQ=60)

                                                                   TAACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT                            <  SRR4302540.8941302/94‑1 (MQ=60)

                                                                     ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA                          <  SRR4302540.101329/94‑1 (MQ=60)

                                                                     ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA                          >  SRR4302540.6964698/1‑94 (MQ=60)

                                                                     ACCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCA                          <  SRR4302540.1759356/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.1446866/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.9190525/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.5373054/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.1446867/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.3740486/94‑1 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         >  SRR4302540.7587112/1‑94 (MQ=60)

                                                                      CCGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAG                         <  SRR4302540.7767203/94‑1 (MQ=60)

                                                                       CGTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGC                        <  SRR4302540.5132951/94‑1 (MQ=60)

                                                                        GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT                       <  SRR4302540.4372787/94‑1 (MQ=60)

                                                                        GTGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCT                       <  SRR4302540.6403017/94‑1 (MQ=60)

                                                                         TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT                      <  SRR4302540.2757730/94‑1 (MQ=60)

                                                                         TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT                      <  SRR4302540.1416127/94‑1 (MQ=60)

                                                                         TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT                      >  SRR4302540.3570089/1‑94 (MQ=60)

                                                                         TGATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTT                      <  SRR4302540.2690092/94‑1 (MQ=60)

                                                                          GATGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTG                     >  SRR4302540.5159762/1‑94 (MQ=60)

                                                                            TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT                   <  SRR4302540.3600463/94‑1 (MQ=60)

                                                                            TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT                   >  SRR4302540.115745/1‑94 (MQ=60)

                                                                            TGGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT                   <  SRR4302540.2652119/94‑1 (MQ=60)

                                                                            TGGTCAGGAAGAGAAGCGGGGTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCT                   <  SRR4302540.509569/94‑1 (MQ=60)

                                                                             GGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTG                  <  SRR4302540.8521284/94‑1 (MQ=60)

                                                                             GGTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTG                  >  SRR4302540.6912789/1‑94 (MQ=60)

                                                                              GTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGG                 >  SRR4302540.4685771/1‑94 (MQ=60)

                                                                              GTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGG                 <  SRR4302540.8732245/94‑1 (MQ=60)

                                                                              GTCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGG                 <  SRR4302540.3259182/94‑1 (MQ=60)

                                                                               TCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGT                <  SRR4302540.8341268/94‑1 (MQ=60)

                                                                               TCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGT                <  SRR4302540.684504/94‑1 (MQ=60)

                                                                               GCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGT                <  SRR4302540.7922406/94‑1 (MQ=60)

                                                                               GCAGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGT                <  SRR4302540.7922405/94‑1 (MQ=60)

                                                                                 AGGAAGAGAAGCGGTTTTCCTTCAACCGCATCTCCACGGTGGCGGTGTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              <  SRR4302540.5417368/94‑1 (MQ=53)

                                                                                 AGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              >  SRR4302540.6152184/1‑94 (MQ=60)

                                                                                 AGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              <  SRR4302540.3860877/94‑1 (MQ=60)

                                                                                 AGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              <  SRR4302540.3183364/94‑1 (MQ=60)

                                                                                 AGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              <  SRR4302540.9195480/94‑1 (MQ=60)

                                                                                 AGGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTAT              >  SRR4302540.6640981/1‑94 (MQ=60)

                                                                                  GGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATG             <  SRR4302540.9512305/94‑1 (MQ=60)

                                                                                  GGAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATG             <  SRR4302540.2328366/94‑1 (MQ=60)

                                                                                   GAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGC            <  SRR4302540.9340/94‑1 (MQ=60)

                                                                                   GAAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGC            <  SRR4302540.6846422/94‑1 (MQ=60)

                                                                                    AAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCG           >  SRR4302540.5213112/1‑94 (MQ=60)

                                                                                    AAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCG           >  SRR4302540.6848999/1‑94 (MQ=60)

                                                                                    AAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCG           >  SRR4302540.2831653/1‑94 (MQ=60)

                                                                                    AAGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCG           >  SRR4302540.125886/1‑94 (MQ=60)

                                                                                     AGAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGT          <  SRR4302540.1393418/94‑1 (MQ=60)

                                                                                      GAGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTG         >  SRR4302540.10107739/1‑94 (MQ=60)

                                                                                       AGAAGCGTGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGG        <  SRR4302540.8595044/94‑1 (MQ=60)

                                                                                       AGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGG        >  SRR4302540.2880563/1‑94 (MQ=60)

                                                                                       AGAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGG        >  SRR4302540.7500351/1‑94 (MQ=60)

                                                                                        GAAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGT       <  SRR4302540.9213224/94‑1 (MQ=60)

                                                                                         AAGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTC      >  SRR4302540.5340783/1‑94 (MQ=60)

                                                                                          AGCGGTTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCT     <  SRR4302540.6306478/94‑1 (MQ=60)

                                                                                          AGCGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCT     >  SRR4302540.1962333/1‑94 (MQ=60)

                                                                                            CGGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGA   >  SRR4302540.1944921/1‑94 (MQ=60)

                                                                                             TGGTTTCCTTAAACAGCATCAACATGATGGCCGACTACGGTGCGCGTGGTTCTACGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.4061019/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTCTGCGTGGTCTGAG  >  SRR4302540.715384/1‑94 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.8716086/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.4951452/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.3231935/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.9306690/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  >  SRR4302540.6809306/1‑94 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.10146946/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.9306689/94‑1 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAG  >  SRR4302540.9047439/1‑94 (MQ=60)

                                                                                             GGGTTTCCTTCAACAGCAGCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  <  SRR4302540.2325434/94‑1 (MQ=60)

TCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGAT  >  NC_000913/4184981‑4185167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`