Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,215,052	A→G	E122G (GAG→GGG)	aceA →	isocitrate lyase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,215,052	0	A	G	99.7%	981.2 / NA	307	E122G (GAG→GGG)	aceA	isocitrate lyase
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (137/169); minor base T (1/0); total (138/169)
Fisher's exact test for biased strand distribution p-value = 4.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

GATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCC  >  NC_000913/4214962‑4215141

gATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGc                                                                                         <  2:1898137/93‑1 (MQ=255)

 aTGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCg                                                                                        <  2:8843310/93‑1 (MQ=255)

 aTGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCg                                                                                        <  1:3326023/93‑1 (MQ=255)

     cAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATc                                                                                    <  1:1015089/93‑1 (MQ=255)

     cAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATc                                                                                    <  1:4892445/93‑1 (MQ=255)

     cAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATc                                                                                    <  1:2151517/93‑1 (MQ=255)

      aGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATca                                                                                   >  1:7922126/1‑93 (MQ=255)

       ggTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATcaa                                                                                  <  2:7393633/93‑1 (MQ=255)

       ggTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATcaa                                                                                  >  1:8630061/1‑93 (MQ=255)

       ggTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATcaa                                                                                  >  2:3264899/1‑93 (MQ=255)

        gTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGGCGGATcaa                                                                                  >  2:583930/1‑93 (MQ=255)

         tAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATcaaca                                                                                <  1:8395592/93‑1 (MQ=255)

          aGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATcaacaa                                                                               <  2:130450/93‑1 (MQ=255)

           gcggcgGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCaacaac                                                                              <  2:6611217/93‑1 (MQ=255)

           gcggcgGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCaacaac                                                                              >  1:1378696/1‑93 (MQ=255)

             ggcggACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAacac                                                                            <  2:8342730/93‑1 (MQ=255)

             ggcggACGCTAACCTGGCGGCCAGCATGTAACCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAacac                                                                            <  2:1958843/93‑1 (MQ=255)

              gcggACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACAcc                                                                           <  2:3411039/93‑1 (MQ=255)

               cggACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCt                                                                          >  1:9582032/1‑93 (MQ=255)

                 gACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTc                                                                        <  2:2099268/93‑1 (MQ=255)

                 gACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTc                                                                        >  1:4755283/1‑93 (MQ=255)

                   cGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcg                                                                      <  1:9932185/93‑1 (MQ=255)

                   cGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcg                                                                      <  1:5722202/93‑1 (MQ=255)

                    gCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgt                                                                     <  2:2239378/93‑1 (MQ=255)

                    gCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgt                                                                     <  1:1678412/93‑1 (MQ=255)

                    gCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCGATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgt                                                                     <  2:3693245/93‑1 (MQ=255)

                     cTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgtc                                                                    >  1:9744960/1‑93 (MQ=255)

                      tAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgtcg                                                                   >  1:5992642/1‑93 (MQ=255)

                       aaCCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCcgtcgt                                                                  >  2:5600684/1‑93 (MQ=255)

                        aCCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTg                                                                 >  1:9290197/1‑93 (MQ=255)

                         gcTGGCGGGCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACCCGGTGCCGGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGc                                                                <  1:2649820/92‑1 (MQ=255)

                         ccTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGTGCGGATCAACAACACCTTCCGTCGTGc                                                                >  1:6082960/1‑93 (MQ=255)

                            ggcggcGAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGa                                                             >  2:9880147/1‑93 (MQ=255)

                              cggcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAATCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATc                                                           <  2:3070905/93‑1 (MQ=255)

                              cggcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATc                                                           <  1:2691285/93‑1 (MQ=255)

                               ggcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCa                                                          >  2:8221132/1‑93 (MQ=255)

                                gcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAg                                                         >  2:9458729/1‑93 (MQ=255)

                                gcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAg                                                         <  2:5537319/93‑1 (MQ=255)

                                gcCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAg                                                         <  1:6154368/93‑1 (MQ=255)

                                cccAGCATTTATCCCGATAAGCCGCTCTATAACGAAAACTCGGAGACAGCTGAGGC‑GGACCGGATCAACAACACTTTCCGCCGCGCACATCAg                                                         >  2:4436345/2‑93 (MQ=255)

                                 ccAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGa                                                        >  2:5420633/1‑93 (MQ=255)

                                 ccAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGa                                                        >  2:4181158/1‑93 (MQ=255)

                                 ccAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGa                                                        >  2:4488644/1‑93 (MQ=255)

                                  cAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGAt                                                       >  1:4209164/1‑93 (MQ=255)

                                  cAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGAt                                                       <  2:2732469/93‑1 (MQ=255)

                                  cAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGAt                                                       >  2:9066539/1‑93 (MQ=255)

                                    gCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCATATcc                                                     <  2:4588156/93‑1 (MQ=255)

                                    gCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATcc                                                     >  1:9452755/1‑93 (MQ=255)

                                      aTGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCaa                                                   <  1:6596062/93‑1 (MQ=255)

                                       tGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAt                                                  <  2:5023716/93‑1 (MQ=255)

                                       tGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAt                                                  >  2:394815/1‑93 (MQ=255)

                                       tGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAt                                                  >  2:2920150/1‑93 (MQ=255)

                                       tGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAt                                                  >  1:3199620/1‑93 (MQ=255)

                                       tGTATCCGGATCAGGCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTACCGTCGTGCCGATCAGATCCAAt                                                  >  2:6910536/1‑93 (MQ=255)

                                        gTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATg                                                 >  1:4851125/1‑93 (MQ=255)

                                         tATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATgg                                                <  2:6436338/93‑1 (MQ=255)

                                          aTCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATggc                                               >  1:3831969/1‑92 (MQ=255)

                                          aTCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGt                                               >  1:6371998/1‑93 (MQ=255)

                                           tCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTc                                              <  2:6338485/93‑1 (MQ=255)

                                            ccGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTcc                                             <  1:4581249/93‑1 (MQ=255)

                                                aTCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCgg                                         >  1:7020719/1‑93 (MQ=255)

                                                aTCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCgg                                         <  1:6264976/93‑1 (MQ=255)

                                                 tCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCggg                                        >  2:7460174/1‑93 (MQ=255)

                                                  cAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGc                                       >  1:8280001/1‑93 (MQ=255)

                                                   aGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCa                                      <  1:2608020/93‑1 (MQ=255)

                                                    gTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCAt                                     <  2:6177753/93‑1 (MQ=255)

                                                       gCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGa                                  >  1:3470170/1‑93 (MQ=255)

                                                        ctctATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCTATGGTCCGCGGGCATTGAg                                 <  1:4647504/93‑1 (MQ=255)

                                                        ctctATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAg                                 >  2:7578608/1‑93 (MQ=255)

                                                         tctATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGc                                >  2:7170332/1‑93 (MQ=255)

                                                         tctATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGc                                <  2:5684318/93‑1 (MQ=255)

                                                         tctATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGc                                <  2:9174908/93‑1 (MQ=255)

                                                           tATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCg                              <  1:2506845/93‑1 (MQ=255)

                                                            aTCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCgg                             >  1:7057758/1‑93 (MQ=255)

                                                             tCCGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCggg                            <  2:2271407/93‑1 (MQ=255)

                                                              cccgCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACCCCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGc                           <  2:8568718/90‑1 (MQ=255)

                                                              ccGGCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGc                           <  1:7626689/93‑1 (MQ=255)

                                                                ggCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGa                         <  1:6439287/93‑1 (MQ=255)

                                                                 gCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACACCACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGAt                        <  1:5607140/93‑1 (MQ=255)

                                                                 gCAAACTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGAt                        <  1:4461081/93‑1 (MQ=255)

                                                                   aaaCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATcc                      <  2:7765690/93‑1 (MQ=255)

                                                                    acttCGGTCGCAGCTGTGGC‑GGGGCGGACCAACTACACCTTCCGTCGTGCCCATCAGACCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcg                     <  1:9683613/90‑1 (MQ=255)

                                                                    aaCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcg                     <  1:9049069/93‑1 (MQ=255)

                                                                    aaCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcg                     <  1:2910569/93‑1 (MQ=255)

                                                                    aaCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcg                     >  2:4868052/1‑93 (MQ=255)

                                                                    aaCTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcg                     >  1:6814982/1‑93 (MQ=255)

                                                                      cTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCcgcg                   >  1:8922555/1‑93 (MQ=255)

                                                                      cTCGGTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCCGGCATTGAGCCGGGCGATCcgcg                   >  2:9222034/1‑93 (MQ=255)

                                                                         ggTGCCAGCTGTGGT‑GGGGCGGATCAACAACCCCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTa                <  1:5496303/93‑1 (MQ=255)

                                                                         ggTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTa                <  1:7424678/93‑1 (MQ=255)

                                                                         ggTGCCAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTa                <  1:2260940/93‑1 (MQ=255)

                                                                              cAGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCg           >  1:883871/1‑93 (MQ=255)

                                                                               aGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGa          <  1:1547468/93‑1 (MQ=255)

                                                                               aGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGa          <  2:1055225/93‑1 (MQ=255)

                                                                               aGCTGTGGT‑GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGa          >  1:8075461/1‑93 (MQ=255)

                                                                                   gtggt‑gGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTAc      <  1:5222805/93‑1 (MQ=255)

                                                                                     ggt‑ggGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACtt    <  2:1565430/93‑1 (MQ=255)

                                                                                      gt‑ggGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTc   <  2:5173026/93‑1 (MQ=255)

                                                                                       t‑ggGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTcc  >  1:2774188/1‑93 (MQ=255)

                                                                                       t‑ggGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTcc  <  1:1266443/93‑1 (MQ=255)

GATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGT‑GGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCC  >  NC_000913/4214962‑4215141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCC  >  NC_000913/4214959‑4215145

CGGGATGGTAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGG                                                                                               >  SRR4302540.615379/1‑94 (MQ=60)

CGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGG                                                                                               <  SRR4302540.9927607/94‑1 (MQ=60)

CGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTCTGGTGGG                                                                                               >  SRR4302540.10030344/1‑94 (MQ=60)

 GGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGG                                                                                              >  SRR4302540.8482180/1‑94 (MQ=60)

  GGATGGCAGTTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCTCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGC                                                                                             <  SRR4302540.4137179/94‑1 (MQ=60)

  GGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGC                                                                                             <  SRR4302540.6265515/94‑1 (MQ=60)

    GTGGCCGGTAGCGGCGGACGCTAACCTGGCGTCCAGCATGTATCCGGATCAGTCGCTCTATGCGGCAACCTCGGTGCCAGCTGTGGTGGGGCGG                                                                                           <  SRR4302540.2964509/94‑1 (MQ=60)

    ATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGG                                                                                           <  SRR4302540.3362521/94‑1 (MQ=60)

    ATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGG                                                                                           >  SRR4302540.9615993/1‑94 (MQ=60)

    ATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGGGGGGCGG                                                                                           >  SRR4302540.7521048/1‑94 (MQ=60)

     TGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGA                                                                                          <  SRR4302540.2275191/94‑1 (MQ=60)

      GGGAGGTAGCGGCGGACGCTAAGCTGGGGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGAT                                                                                         <  SRR4302540.2729857/94‑1 (MQ=60)

       GCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATC                                                                                        <  SRR4302540.4049361/94‑1 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       <  SRR4302540.1025378/94‑1 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       >  SRR4302540.8014475/1‑94 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       >  SRR4302540.125677/1‑94 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       >  SRR4302540.5049291/1‑94 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       <  SRR4302540.4945054/94‑1 (MQ=60)

        CAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCA                                                                                       <  SRR4302540.2174653/94‑1 (MQ=60)

         AGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAA                                                                                      >  SRR4302540.8730302/1‑94 (MQ=60)

         AGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAA                                                                                      >  SRR4302540.2429679/1‑94 (MQ=60)

          GGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAAC                                                                                     <  SRR4302540.4882618/94‑1 (MQ=60)

            TAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAA                                                                                   <  SRR4302540.8493018/94‑1 (MQ=60)

            GAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAA                                                                                   <  SRR4302540.8403334/94‑1 (MQ=60)

             AGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAAC                                                                                  >  SRR4302540.1393389/1‑94 (MQ=60)

             AGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAAC                                                                                  >  SRR4302540.1928065/1‑94 (MQ=60)

                GGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACC                                                                               >  SRR4302540.1418164/1‑94 (MQ=60)

                GGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACC                                                                               >  SRR4302540.6477481/1‑94 (MQ=60)

                 GCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCT                                                                              >  SRR4302540.9695177/1‑94 (MQ=60)

                  CGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTT                                                                             <  SRR4302540.2680952/94‑1 (MQ=60)

                  CGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTT                                                                             <  SRR4302540.4921677/94‑1 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            >  SRR4302540.3277654/1‑94 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            <  SRR4302540.5720913/94‑1 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            <  SRR4302540.7988315/94‑1 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            <  SRR4302540.7526815/94‑1 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            <  SRR4302540.3957991/94‑1 (MQ=60)

                   GGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTC                                                                            >  SRR4302540.4806022/1‑94 (MQ=60)

                     ACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCG                                                                          <  SRR4302540.9340746/94‑1 (MQ=60)

                     ACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCG                                                                          <  SRR4302540.1330111/94‑1 (MQ=60)

                      CGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGT                                                                         <  SRR4302540.6279755/94‑1 (MQ=60)

                      CGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGT                                                                         <  SRR4302540.5785191/94‑1 (MQ=60)

                      CGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGT                                                                         <  SRR4302540.10048106/94‑1 (MQ=60)

                      CGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGT                                                                         >  SRR4302540.5513944/1‑94 (MQ=60)

                      CGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGC                                                                         >  SRR4302540.9751283/1‑94 (MQ=60)

                       GCTAACCTGGCGGCCAGCATTTATCCGGATCAGTCGCTCTATACGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTC                                                                        >  SRR4302540.6831291/1‑94 (MQ=60)

                       GCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACACCACCTCCCGTC                                                                        >  SRR4302540.4751247/1‑94 (MQ=60)

                       GCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTC                                                                        <  SRR4302540.1696635/94‑1 (MQ=60)

                       GCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTC                                                                        <  SRR4302540.6424255/94‑1 (MQ=60)

                       GCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTC                                                                        >  SRR4302540.9859328/1‑94 (MQ=60)

                        CTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCG                                                                       >  SRR4302540.5583563/1‑94 (MQ=60)

                        CTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCG                                                                       <  SRR4302540.8979172/94‑1 (MQ=60)

                        CTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCG                                                                       >  SRR4302540.6059031/1‑94 (MQ=60)

                         TAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGT                                                                      >  SRR4302540.2839943/1‑94 (MQ=60)

                          AACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTG                                                                     >  SRR4302540.940119/1‑94 (MQ=60)

                          AACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTG                                                                     >  SRR4302540.9401223/1‑94 (MQ=60)

                           ACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGTGCGGATCAACAACACCTTCCGTCGTGC                                                                    >  SRR4302540.6150650/1‑94 (MQ=60)

                           ACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGC                                                                    >  SRR4302540.462439/1‑94 (MQ=60)

                           ACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGC                                                                    >  SRR4302540.3751200/1‑94 (MQ=60)

                           ACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGC                                                                    >  SRR4302540.5769966/1‑94 (MQ=60)

                           ACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGC                                                                    >  SRR4302540.6150651/1‑94 (MQ=60)

                            GCTGGCGGGCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACCCGGTGCCGGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCC                                                                   <  SRR4302540.2678564/94‑1 (MQ=60)

                            CCTGTCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCC                                                                   <  SRR4302540.2520504/94‑1 (MQ=60)

                            CCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTGCTGCC                                                                   >  SRR4302540.4534798/1‑94 (MQ=60)

                            CCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCC                                                                   <  SRR4302540.2678565/94‑1 (MQ=60)

                             CTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCG                                                                  >  SRR4302540.58194/1‑94 (MQ=60)

                             CTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCG                                                                  >  SRR4302540.156216/1‑94 (MQ=60)

                             CTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCG                                                                  <  SRR4302540.2005139/94‑1 (MQ=60)

                              TGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGA                                                                 >  SRR4302540.1622524/1‑94 (MQ=60)

                               GGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGAT                                                                <  SRR4302540.484191/94‑1 (MQ=60)

                                 CGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCA                                                              <  SRR4302540.2720358/94‑1 (MQ=60)

                                 CGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCA                                                              <  SRR4302540.633783/94‑1 (MQ=60)

                                  GGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAG                                                             <  SRR4302540.9779496/94‑1 (MQ=60)

                                   GCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGA                                                            >  SRR4302540.3337956/1‑94 (MQ=60)

                                   GCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGA                                                            <  SRR4302540.6222928/94‑1 (MQ=60)

                                    CCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGAT                                                           <  SRR4302540.1063583/94‑1 (MQ=60)

                                    CCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGAT                                                           >  SRR4302540.4254987/1‑94 (MQ=60)

                                     CAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATC                                                          >  SRR4302540.3474855/1‑94 (MQ=60)

                                     CAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATC                                                          >  SRR4302540.6312533/1‑94 (MQ=60)

                                      AGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCC                                                         >  SRR4302540.9564951/1‑94 (MQ=60)

                                       GCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCA                                                        >  SRR4302540.7380706/1‑94 (MQ=60)

                                       GCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCA                                                        >  SRR4302540.7116331/1‑94 (MQ=60)

                                       GCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCA                                                        <  SRR4302540.8390771/94‑1 (MQ=60)

                                        CATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAA                                                       >  SRR4302540.8984918/1‑94 (MQ=60)

                                         ATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAT                                                      <  SRR4302540.6669107/94‑1 (MQ=60)

                                         ATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAT                                                      >  SRR4302540.3234370/1‑94 (MQ=60)

                                         ATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAT                                                      >  SRR4302540.881306/1‑94 (MQ=60)

                                         ATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAT                                                      >  SRR4302540.8743120/1‑94 (MQ=60)

                                         ATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAAT                                                      <  SRR4302540.6859926/94‑1 (MQ=60)

                                          TGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTTGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATG                                                     <  SRR4302540.3034169/94‑1 (MQ=60)

                                          TGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATG                                                     <  SRR4302540.4668019/94‑1 (MQ=60)

                                          TGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATG                                                     >  SRR4302540.4903108/1‑94 (MQ=60)

                                          TGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATG                                                     >  SRR4302540.6082366/1‑94 (MQ=60)

                                           GTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGG                                                    <  SRR4302540.7101254/94‑1 (MQ=60)

                                            TATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGT                                                   >  SRR4302540.6442948/1‑94 (MQ=60)

                                            TATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGT                                                   <  SRR4302540.993972/94‑1 (MQ=60)

                                            TATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGC                                                   >  SRR4302540.3873671/1‑94 (MQ=60)

                                            TATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGC                                                   >  SRR4302540.3365118/1‑94 (MQ=60)

                                               CCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCG                                                <  SRR4302540.4630634/94‑1 (MQ=60)

                                               CCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCG                                                >  SRR4302540.4671521/1‑94 (MQ=60)

                                                 GGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCG                                              >  SRR4302540.8099418/1‑94 (MQ=60)

                                                  GATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGG                                             >  SRR4302540.2208613/1‑94 (MQ=60)

                                                  GATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGG                                             >  SRR4302540.7098696/1‑94 (MQ=60)

                                                   ATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGG                                            <  SRR4302540.6334671/94‑1 (MQ=60)

                                                   ATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGG                                            >  SRR4302540.413134/1‑94 (MQ=60)

                                                    TCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGC                                           >  SRR4302540.8376168/1‑94 (MQ=60)

                                                    TCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGC                                           >  SRR4302540.2570225/1‑94 (MQ=60)

                                                    TCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGC                                           <  SRR4302540.7064638/94‑1 (MQ=60)

                                                      AGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCAT                                         <  SRR4302540.2636169/94‑1 (MQ=60)

                                                      AGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCAT                                         <  SRR4302540.2636168/94‑1 (MQ=60)

                                                      AGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCAT                                         >  SRR4302540.4295457/1‑94 (MQ=60)

                                                      AGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCAT                                         <  SRR4302540.9276935/94‑1 (MQ=60)

                                                       GTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACTCCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATT                                        <  SRR4302540.500207/94‑1 (MQ=60)

                                                       GTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATT                                        <  SRR4302540.7221561/94‑1 (MQ=60)

                                                       GTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATT                                        >  SRR4302540.6068992/1‑94 (MQ=60)

                                                        TCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTG                                       <  SRR4302540.8127071/94‑1 (MQ=60)

                                                        TCGCTCTATCCGACAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTG                                       >  SRR4302540.3796643/1‑94 (MQ=60)

                                                         CGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGA                                      >  SRR4302540.3507949/1‑94 (MQ=60)

                                                          GCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAG                                     >  SRR4302540.2647309/1‑94 (MQ=60)

                                                          GCCCTATCGGGCAAACTCGGTGGCAGCTGTGGTGCGGCGGATCAACAACGCCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAG                                     <  SRR4302540.6666685/94‑1 (MQ=60)

                                                          GCCCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAG                                     <  SRR4302540.6666684/94‑1 (MQ=60)

                                                           CTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCTATGGTCCGCGGGCATTGAGC                                    <  SRR4302540.4697252/94‑1 (MQ=60)

                                                           CTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGC                                    <  SRR4302540.9841536/94‑1 (MQ=60)

                                                            TCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCC                                   <  SRR4302540.2746230/94‑1 (MQ=60)

                                                            TCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGACCAGATCCAATGGTCCGCGGGCATTGAGCC                                   >  SRR4302540.2937461/1‑94 (MQ=60)

                                                             CTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCG                                  >  SRR4302540.1634037/1‑94 (MQ=60)

                                                             CTATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCG                                  <  SRR4302540.2869929/94‑1 (MQ=60)

                                                              TATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGG                                 >  SRR4302540.7136241/1‑94 (MQ=60)

                                                              TATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGG                                 >  SRR4302540.9846494/1‑94 (MQ=60)

                                                              TATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGG                                 >  SRR4302540.4487331/1‑94 (MQ=60)

                                                              TATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGG                                 <  SRR4302540.2533915/94‑1 (MQ=60)

                                                               ATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGG                                >  SRR4302540.963936/1‑94 (MQ=60)

                                                               ATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGG                                <  SRR4302540.9613385/94‑1 (MQ=60)

                                                               ATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGG                                <  SRR4302540.6035238/94‑1 (MQ=60)

                                                               ATCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGG                                >  SRR4302540.7853671/1‑94 (MQ=60)

                                                                TCCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGC                               >  SRR4302540.4932501/1‑94 (MQ=60)

                                                                 CCGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCG                              <  SRR4302540.7712464/94‑1 (MQ=60)

                                                                  CGGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGA                             >  SRR4302540.6533761/1‑94 (MQ=60)

                                                                   GGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGAT                            <  SRR4302540.6510951/94‑1 (MQ=60)

                                                                   GGCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGAT                            <  SRR4302540.6510952/94‑1 (MQ=60)

                                                                    GCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACACCACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATC                           <  SRR4302540.5668834/94‑1 (MQ=60)

                                                                    GCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATC                           <  SRR4302540.9563899/94‑1 (MQ=60)

                                                                    GCAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATC                           <  SRR4302540.4509444/94‑1 (MQ=60)

                                                                     CAAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCC                          <  SRR4302540.10043874/94‑1 (MQ=60)

                                                                      AAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCG                         >  SRR4302540.6890416/1‑94 (MQ=60)

                                                                      AAACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCG                         <  SRR4302540.5286473/94‑1 (MQ=60)

                                                                       acttcggtcgCAGCTGTGGCGGGGCGGACCAACTACACCTTCCGTCGTGCCCATCAGACCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGC                        <  SRR4302540.9797542/84‑1 (MQ=60)

                                                                       AACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGC                        <  SRR4302540.2942382/94‑1 (MQ=60)

                                                                       AACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGC                        >  SRR4302540.8702821/1‑94 (MQ=60)

                                                                       AACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGC                        <  SRR4302540.9157700/94‑1 (MQ=60)

                                                                        ACTCGGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCG                       >  SRR4302540.9026078/1‑94 (MQ=60)

                                                                         CTCGGTGCCAGCTGTGGGGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGC                      <  SRR4302540.4768433/94‑1 (MQ=60)

                                                                            GGTGCCAGCTGTGGTGGGGCGGATCAACAACCCCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTAT                   <  SRR4302540.5556819/94‑1 (MQ=60)

                                                                            GGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTAT                   <  SRR4302540.8218739/94‑1 (MQ=60)

                                                                            GGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTAT                   <  SRR4302540.7507385/94‑1 (MQ=60)

                                                                            GGTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTAT                   <  SRR4302540.2285196/94‑1 (MQ=60)

                                                                             GTGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATG                  <  SRR4302540.7672320/94‑1 (MQ=60)

                                                                              TGCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGT                 <  SRR4302540.913546/94‑1 (MQ=60)

                                                                               GCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTC                >  SRR4302540.9032390/1‑94 (MQ=60)

                                                                               GCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTC                >  SRR4302540.2668700/1‑94 (MQ=60)

                                                                               GCCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGACGATCCGCGCTATGTC                >  SRR4302540.133093/1‑94 (MQ=60)

                                                                                CCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCG               >  SRR4302540.893248/1‑94 (MQ=60)

                                                                                CCAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCG               >  SRR4302540.893247/1‑94 (MQ=60)

                                                                                 CAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGA              >  SRR4302540.8169171/1‑94 (MQ=60)

                                                                                 CAGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGA              <  SRR4302540.8170649/94‑1 (MQ=60)

                                                                                  AGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGAT             <  SRR4302540.6929893/94‑1 (MQ=60)

                                                                                  AGCTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGAT             <  SRR4302540.1564536/94‑1 (MQ=60)

                                                                                    CTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTA           >  SRR4302540.6051864/1‑94 (MQ=60)

                                                                                    CTGTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTA           <  SRR4302540.8527546/94‑1 (MQ=60)

                                                                                      GTGGTGGGGCGGATCAACAACCCCTTCCGCCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACT         <  SRR4302540.4920261/94‑1 (MQ=60)

                                                                                      GTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACT         <  SRR4302540.5279751/94‑1 (MQ=60)

                                                                                      GTGGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACT         >  SRR4302540.2252690/1‑94 (MQ=60)

                                                                                        GGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTC       <  SRR4302540.6222365/94‑1 (MQ=60)

                                                                                        GGTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTC       >  SRR4302540.5571603/1‑94 (MQ=60)

                                                                                         GTGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCC      >  SRR4302540.2804167/1‑94 (MQ=60)

                                                                                          TGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCT     >  SRR4302540.7122810/1‑94 (MQ=60)

                                                                                          TGGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCT     <  SRR4302540.1279467/94‑1 (MQ=60)

                                                                                           GGGGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTG    <  SRR4302540.2978882/94‑1 (MQ=60)

                                                                                           GGGGCCGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTG    <  SRR4302540.250358/94‑1 (MQ=60)

                                                                                             GGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCC  >  SRR4302540.9776764/1‑94 (MQ=60)

CGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCC  >  NC_000913/4214959‑4215145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`