Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,219,434	A→G	A211A (GCT→GCC)	arp ←	Arp

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,219,434	0	A	G	99.8%	2034.7 / ‑5.4	620	A211A (GCT→GCC)	arp	Arp
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (325/294); total (326/294)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01

Only 100 of 679 total aligned reads displayed.

CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC  >  NC_000913/4219344‑4219523

 cccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGgcggca                                                                                        <  2:2897797/92‑1 (MQ=255)

 accaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAggcggcc                                                                                        >  2:5968249/1‑92 (MQ=255)

 accaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCACgcggca                                                                                        >  1:9116133/1‑93 (MQ=255)

  ccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaa                                                                                       <  2:6953214/93‑1 (MQ=255)

   caGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaac                                                                                      >  1:8738043/1‑93 (MQ=255)

     gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgc                                                                                    <  1:5952277/93‑1 (MQ=255)

      tAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgca                                                                                   >  1:6099837/1‑93 (MQ=255)

       aaTATGGCTGCCATAAGACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaa                                                                                  <  2:9857929/93‑1 (MQ=255)

       aaTATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaa                                                                                  <  1:6458111/93‑1 (MQ=255)

        atatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaac                                                                                 >  2:3946591/1‑93 (MQ=255)

         tatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGcaacgcaacg                                                                                >  2:6685470/1‑93 (MQ=255)

          atGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCaacgcaacgc                                                                               <  2:7736887/93‑1 (MQ=255)

          atGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCaacgcaacgc                                                                               >  2:5397447/1‑93 (MQ=255)

           tGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGcc                                                                              >  1:4310642/1‑93 (MQ=255)

              cTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCt                                                                           <  2:3004040/93‑1 (MQ=255)

              cTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCt                                                                           <  2:4736079/93‑1 (MQ=255)

               tggcATAACACGTGTGCCATTTGATTCCATCTTGTCAAAAGATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc                                                                          <  1:2631739/90‑1 (MQ=255)

                gCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCa                                                                         <  1:6805542/93‑1 (MQ=255)

                 ccATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAg                                                                        <  2:5186985/93‑1 (MQ=255)

                 ccATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAg                                                                        >  2:1925491/1‑93 (MQ=255)

                  cATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAgg                                                                       <  2:331254/93‑1 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAggc                                                                      >  1:4591008/1‑92 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      <  1:3580352/93‑1 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      <  2:8780382/93‑1 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      >  1:1580212/1‑93 (MQ=255)

                   aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGa                                                                      <  1:2950097/93‑1 (MQ=255)

                    tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc                                                                     <  1:4412286/93‑1 (MQ=255)

                    tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc                                                                     >  2:4550475/1‑93 (MQ=255)

                    tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc                                                                     <  2:2060741/93‑1 (MQ=255)

                      acacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACgg                                                                   >  1:5228336/1‑93 (MQ=255)

                      acacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACgg                                                                   <  2:2437530/93‑1 (MQ=255)

                       cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc                                                                  <  1:2243652/93‑1 (MQ=255)

                       cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc                                                                  <  2:5038367/93‑1 (MQ=255)

                         cTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTg                                                                <  1:5426432/93‑1 (MQ=255)

                          tGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTgg                                                               >  1:7134944/1‑93 (MQ=255)

                          tGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTgg                                                               <  1:80399/93‑1 (MQ=255)

                           gATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGa                                                              >  2:819299/1‑93 (MQ=255)

                           gATGCCATTTGATCCCATCTTGTCAAAATATGCTTTCATAACTACCCCGAAAGCACCGCAGGCGGCAACGCAACGCCCCTTAGGACGGCTAGa                                                              <  2:3724367/93‑1 (MQ=255)

                             tGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGaaa                                                            >  2:2841161/1‑93 (MQ=255)

                              gCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAc                                                           >  1:6879753/1‑93 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        <  2:7914851/93‑1 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        >  1:8786204/1‑93 (MQ=255)

                                 aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa                                                        <  1:9701406/93‑1 (MQ=255)

                                  tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc                                                       <  2:7639827/93‑1 (MQ=255)

                                   ttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACg                                                      <  1:3894795/93‑1 (MQ=255)

                                    tGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGc                                                     <  1:7238414/93‑1 (MQ=255)

                                    tGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGc                                                     <  2:125563/93‑1 (MQ=255)

                                       ttCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaa                                                  <  1:9294592/93‑1 (MQ=255)

                                       ttCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaa                                                  >  2:1476482/1‑93 (MQ=255)

                                        tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa                                                 <  2:8374756/93‑1 (MQ=255)

                                           aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc                                              >  2:5736235/1‑93 (MQ=255)

                                            tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             <  2:3460297/93‑1 (MQ=255)

                                            tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             <  1:1745019/93‑1 (MQ=255)

                                            tCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCt                                             >  2:7347348/1‑93 (MQ=255)

                                             cTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTg                                            >  1:3476920/1‑93 (MQ=255)

                                             cTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTg                                            >  2:9617519/1‑93 (MQ=255)

                                              ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg                                           >  1:1392932/1‑93 (MQ=255)

                                              ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg                                           >  1:2833071/1‑93 (MQ=255)

                                                 tCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttt                                        >  2:4291566/1‑93 (MQ=255)

                                                  cAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGtttt                                       >  2:1083320/1‑93 (MQ=255)

                                                   aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt                                      <  2:2220346/93‑1 (MQ=255)

                                                   aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt                                      >  2:4844591/1‑93 (MQ=255)

                                                   aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt                                      >  1:8455746/1‑93 (MQ=255)

                                                    aaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTg                                     >  2:9056900/1‑93 (MQ=255)

                                                     aaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc                                    >  1:7413191/1‑93 (MQ=255)

                                                      atatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCa                                   >  1:1969758/1‑93 (MQ=255)

                                                      atatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCa                                   <  1:9801150/93‑1 (MQ=255)

                                                       tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTGTGCAt                                  >  1:8961355/1‑93 (MQ=255)

                                                          gCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGCTTTTGCAtttt                               >  2:9277072/1‑93 (MQ=255)

                                                            tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt                             <  1:4081132/93‑1 (MQ=255)

                                                            tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt                             >  1:2437450/1‑93 (MQ=255)

                                                             ttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttg                            <  2:8651999/93‑1 (MQ=255)

                                                             ttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttg                            <  1:3113059/93‑1 (MQ=255)

                                                              tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt                           <  1:10011310/93‑1 (MQ=255)

                                                                 tAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGa                        <  1:8288393/93‑1 (MQ=255)

                                                                 tAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGa                        >  2:894454/1‑93 (MQ=255)

                                                                  aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa                       >  1:5603197/1‑93 (MQ=255)

                                                                   aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg                      >  2:3188453/1‑93 (MQ=255)

                                                                    cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAgg                     >  2:8538432/1‑92 (MQ=255)

                                                                    atAGCCCGACATCCCCCCAGGCGGTAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt                     <  1:9866076/92‑1 (MQ=255)

                                                                     tAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTg                    >  1:5871187/1‑93 (MQ=255)

                                                                      aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc                   <  2:6523455/93‑1 (MQ=255)

                                                                      aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc                   <  2:266533/93‑1 (MQ=255)

                                                                      aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc                   <  1:7833190/93‑1 (MQ=255)

                                                                       gCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCg                  >  1:9511853/1‑93 (MQ=255)

                                                                        cccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGt                 >  2:7043403/1‑93 (MQ=255)

                                                                        cccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGt                 <  1:4877905/93‑1 (MQ=255)

                                                                         ccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTg                <  1:102398/93‑1 (MQ=255)

                                                                         cagAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAATGCCAAAGGCTGGTTTTTGCATTTTTTGTTGAAGTGCGTg                >  2:6408/3‑93 (MQ=255)

                                                                          cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga               >  1:1638835/1‑93 (MQ=255)

                                                                          cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga               <  2:9418746/93‑1 (MQ=255)

                                                                          cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga               >  1:7497992/1‑93 (MQ=255)

                                                                               tCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAt          >  1:3298547/1‑93 (MQ=255)

                                                                               tCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAt          >  1:7600251/1‑93 (MQ=255)

                                                                                cACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtt         >  1:5045207/1‑93 (MQ=255)

                                                                                  ccGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtttt       >  1:6396969/1‑93 (MQ=255)

                                                                                    gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc     <  2:8077605/93‑1 (MQ=255)

                                                                                     caggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCa    <  1:1216836/93‑1 (MQ=255)

                                                                                       ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc  >  2:5814219/1‑93 (MQ=255)

                                                                                       ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc  >  1:3752085/1‑93 (MQ=255)

CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC  >  NC_000913/4219344‑4219523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 368 total aligned reads displayed.

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA  >  NC_000913/4219341‑4219527

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG                                                                                               <  SRR4302540.3285626/94‑1 (MQ=60)

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG                                                                                               <  SRR4302540.9146509/94‑1 (MQ=60)

   CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCACGCGGCA                                                                                            >  SRR4302540.9225709/1‑94 (MQ=60)

    ccaAGTAATATGTCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAA                                                                                           <  SRR4302540.4042129/91‑1 (MQ=60)

    ACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAA                                                                                           >  SRR4302540.5288817/1‑94 (MQ=60)

     CCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAC                                                                                          <  SRR4302540.9054486/94‑1 (MQ=60)

      CAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACG                                                                                         <  SRR4302540.3564078/94‑1 (MQ=60)

      CAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACG                                                                                         <  SRR4302540.1443109/94‑1 (MQ=60)

       AGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGC                                                                                        >  SRR4302540.9291572/1‑94 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       >  SRR4302540.8726957/1‑94 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       >  SRR4302540.6167743/1‑94 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       <  SRR4302540.6018109/94‑1 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       <  SRR4302540.2071415/94‑1 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       >  SRR4302540.4451441/1‑94 (MQ=60)

        GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA                                                                                       >  SRR4302540.4614012/1‑94 (MQ=60)

         TAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAA                                                                                      <  SRR4302540.4775664/94‑1 (MQ=60)

         TAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAA                                                                                      >  SRR4302540.2643080/1‑94 (MQ=60)

          AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC                                                                                     >  SRR4302540.5404446/1‑94 (MQ=60)

          AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC                                                                                     >  SRR4302540.5565662/1‑94 (MQ=60)

           ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG                                                                                    >  SRR4302540.2326148/1‑94 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                  <  SRR4302540.6723626/94‑1 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                  >  SRR4302540.4357566/1‑94 (MQ=60)

             ATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCC                                                                                  <  SRR4302540.1553497/94‑1 (MQ=60)

              TGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCC                                                                                 <  SRR4302540.6523285/94‑1 (MQ=60)

              TGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCC                                                                                 <  SRR4302540.4092111/94‑1 (MQ=60)

                GCGGCCATAACGCTGATGCCATCTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAACCACCGTAGGCGGCAACGCAACGCCCCT                                                                               <  SRR4302540.5953641/94‑1 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                              >  SRR4302540.5885712/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                              >  SRR4302540.7659453/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                              <  SRR4302540.8847929/94‑1 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                              >  SRR4302540.9411920/1‑94 (MQ=60)

                 CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC                                                                              >  SRR4302540.6126536/1‑94 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCG                                                                             >  SRR4302540.8824142/1‑94 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                             >  SRR4302540.4135286/1‑94 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                             <  SRR4302540.7794514/94‑1 (MQ=60)

                  TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA                                                                             <  SRR4302540.1722025/94‑1 (MQ=60)

                   GCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAG                                                                            <  SRR4302540.4270578/94‑1 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCTTAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                           >  SRR4302540.2312592/1‑94 (MQ=60)

                    CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG                                                                           >  SRR4302540.1910303/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTTTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                          <  SRR4302540.1685612/94‑1 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                          >  SRR4302540.8428211/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                          >  SRR4302540.7329263/1‑94 (MQ=60)

                     CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA                                                                          >  SRR4302540.7048033/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTGAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         >  SRR4302540.3450757/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCCGGAC                                                                         >  SRR4302540.3631956/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         <  SRR4302540.3619457/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         >  SRR4302540.6538045/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         <  SRR4302540.500740/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         >  SRR4302540.5649716/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         <  SRR4302540.7499540/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         <  SRR4302540.2982569/94‑1 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         >  SRR4302540.3913350/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         >  SRR4302540.9049018/1‑94 (MQ=60)

                      ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC                                                                         <  SRR4302540.9368296/94‑1 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                        <  SRR4302540.751240/94‑1 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                        >  SRR4302540.3322955/1‑94 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                        <  SRR4302540.4460107/94‑1 (MQ=60)

                       TAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACG                                                                        <  SRR4302540.8984947/94‑1 (MQ=60)

                        AACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGG                                                                       >  SRR4302540.5272601/1‑94 (MQ=60)

                         ACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGC                                                                      <  SRR4302540.5914231/94‑1 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                     <  SRR4302540.10010204/94‑1 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                     <  SRR4302540.2267766/94‑1 (MQ=60)

                          CACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCT                                                                     <  SRR4302540.7484578/94‑1 (MQ=60)

                           ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG                                                                    >  SRR4302540.5151440/1‑94 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                   >  SRR4302540.7214438/1‑94 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                   >  SRR4302540.9683120/1‑94 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                   <  SRR4302540.5486112/94‑1 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                   <  SRR4302540.5486113/94‑1 (MQ=60)

                            CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG                                                                   >  SRR4302540.2949509/1‑94 (MQ=60)

                             TGATTCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                  <  SRR4302540.2336297/94‑1 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                  <  SRR4302540.3257091/94‑1 (MQ=60)

                             TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA                                                                  <  SRR4302540.81239/94‑1 (MQ=60)

                              GATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAA                                                                 <  SRR4302540.666500/94‑1 (MQ=60)

                                 GCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACC                                                              <  SRR4302540.1158791/94‑1 (MQ=60)

                                 GCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACC                                                              <  SRR4302540.146666/94‑1 (MQ=60)

                                  CCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCA                                                             <  SRR4302540.9522938/94‑1 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                            <  SRR4302540.20477/94‑1 (MQ=60)

                                   CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA                                                            >  SRR4302540.8887885/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           <  SRR4302540.882900/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           <  SRR4302540.994037/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.4851553/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.178392/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.1935664/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.4193529/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           <  SRR4302540.6327334/94‑1 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.7866601/1‑94 (MQ=60)

                                    ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC                                                           >  SRR4302540.7681541/1‑94 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                          >  SRR4302540.4414203/1‑94 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                          >  SRR4302540.8093709/1‑94 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                          >  SRR4302540.7301484/1‑94 (MQ=60)

                                     TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG                                                          <  SRR4302540.2907653/94‑1 (MQ=60)

                                      TTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGC                                                         <  SRR4302540.3937071/94‑1 (MQ=60)

                                      TTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGC                                                         >  SRR4302540.10147254/1‑94 (MQ=60)

                                       TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC                                                        <  SRR4302540.7319146/94‑1 (MQ=60)

                                       TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC                                                        >  SRR4302540.9863428/1‑94 (MQ=60)

                                         ATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAA                                                      <  SRR4302540.9963284/94‑1 (MQ=60)

                                          TTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAA                                                     >  SRR4302540.7267545/1‑94 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                    >  SRR4302540.6855413/1‑94 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG                                                    <  SRR4302540.9890475/94‑1 (MQ=60)

                                           TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAAGCACCGCAGGCGGCAACGCAACGCACCTCAGGACGGCTGGAAACCAACGCCAAAG                                                    <  SRR4302540.3366943/94‑1 (MQ=60)

                                             CATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC                                                  >  SRR4302540.1306373/1‑94 (MQ=60)

                                             CATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC                                                  >  SRR4302540.3135858/1‑94 (MQ=60)

                                             CATCTTGTCAAAATATGCTTTCATAACCAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC                                                  <  SRR4302540.5352494/94‑1 (MQ=60)

                                              ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCG                                                 >  SRR4302540.1209156/1‑94 (MQ=60)

                                               TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG                                                <  SRR4302540.7563139/94‑1 (MQ=60)

                                               TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG                                                <  SRR4302540.1641859/94‑1 (MQ=60)

                                                CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGCAACCAACGCCAAAGTCTGG                                               >  SRR4302540.9926539/1‑94 (MQ=60)

                                                CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG                                               >  SRR4302540.1407853/1‑94 (MQ=60)

                                                CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG                                               >  SRR4302540.6517755/1‑94 (MQ=60)

                                                CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG                                               >  SRR4302540.2863712/1‑94 (MQ=60)

                                                 TTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGT                                              >  SRR4302540.8856371/1‑94 (MQ=60)

                                                  TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT                                             <  SRR4302540.3092307/94‑1 (MQ=60)

                                                  TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT                                             >  SRR4302540.2764081/1‑94 (MQ=60)

                                                  TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT                                             >  SRR4302540.3530019/1‑94 (MQ=60)

                                                    TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT                                           <  SRR4302540.9845553/94‑1 (MQ=60)

                                                    TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT                                           >  SRR4302540.4714387/1‑94 (MQ=60)

                                                    TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT                                           <  SRR4302540.3765345/94‑1 (MQ=60)

                                                     CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT                                          >  SRR4302540.5942540/1‑94 (MQ=60)

                                                      AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTG                                         <  SRR4302540.2909835/94‑1 (MQ=60)

                                                       AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC                                        >  SRR4302540.2591520/1‑94 (MQ=60)

                                                       AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC                                        >  SRR4302540.6166136/1‑94 (MQ=60)

                                                        AATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCA                                       >  SRR4302540.7402660/1‑94 (MQ=60)

                                                        AATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCA                                       >  SRR4302540.3233187/1‑94 (MQ=60)

                                                         ATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAGACCAACGCCAAAGTCTGGTTTTTGCAT                                      >  SRR4302540.5208176/1‑94 (MQ=60)

                                                         ATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTGTGCAT                                      >  SRR4302540.9067399/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGTAACCAACGCCACAGTCTGGTTTTTGCCTT                                     >  SRR4302540.7249135/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     >  SRR4302540.8575532/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     >  SRR4302540.5741399/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     >  SRR4302540.6387728/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     >  SRR4302540.797678/1‑94 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     <  SRR4302540.1033488/94‑1 (MQ=60)

                                                          TATGCTTTCATAACTAGCCCGAAAGCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT                                     <  SRR4302540.3514356/94‑1 (MQ=60)

                                                           ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT                                    >  SRR4302540.4398090/1‑94 (MQ=60)

                                                           ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT                                    <  SRR4302540.4652257/94‑1 (MQ=60)

                                                           ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT                                    >  SRR4302540.8179103/1‑94 (MQ=60)

                                                            TGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTT                                   <  SRR4302540.6925095/94‑1 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                 <  SRR4302540.5090048/94‑1 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                 >  SRR4302540.4533078/1‑94 (MQ=60)

                                                              CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT                                 >  SRR4302540.2463698/1‑94 (MQ=60)

                                                               TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG                                >  SRR4302540.1643188/1‑94 (MQ=60)

                                                               TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG                                >  SRR4302540.9132396/1‑94 (MQ=60)

                                                                TGCATAACTAGCCCGAAATCACCTCAGGCGGCAACTCAACGCCCCTCAGCACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGT                               <  SRR4302540.8234778/94‑1 (MQ=60)

                                                                 TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT                              <  SRR4302540.9364502/94‑1 (MQ=60)

                                                                 TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT                              >  SRR4302540.6299823/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                            >  SRR4302540.9713942/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                            >  SRR4302540.7572534/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                            >  SRR4302540.1150441/1‑94 (MQ=60)

                                                                   ATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGA                            >  SRR4302540.9583207/1‑94 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCACCGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           >  SRR4302540.9796418/1‑94 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           <  SRR4302540.8384646/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           >  SRR4302540.6978662/1‑94 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           <  SRR4302540.2166501/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           <  SRR4302540.3226862/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           <  SRR4302540.3654330/94‑1 (MQ=60)

                                                                    TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA                           >  SRR4302540.5664853/1‑94 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG                          <  SRR4302540.1290565/94‑1 (MQ=60)

                                                                     AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG                          <  SRR4302540.3603861/94‑1 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                         <  SRR4302540.2780015/94‑1 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                         >  SRR4302540.2651210/1‑94 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                         <  SRR4302540.1703650/94‑1 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                         >  SRR4302540.1012660/1‑94 (MQ=60)

                                                                      ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT                         >  SRR4302540.10084363/1‑94 (MQ=60)

                                                                       CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG                        >  SRR4302540.8485513/1‑94 (MQ=60)

                                                                       CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG                        <  SRR4302540.4932985/94‑1 (MQ=60)

                                                                         AGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCG                      >  SRR4302540.9624518/1‑94 (MQ=60)

                                                                           CGCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAACCCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG                    <  SRR4302540.3899780/94‑1 (MQ=60)

                                                                           CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG                    >  SRR4302540.127339/1‑94 (MQ=60)

                                                                            CCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGACACCAACGCCCAGGTCTGGTTTTTGAATTTTTTGTTagggtcctgaa                   >  SRR4302540.7581767/1‑83 (MQ=60)

                                                                            CCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGA                   >  SRR4302540.1656753/1‑94 (MQ=60)

                                                                            CCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGA                   <  SRR4302540.103490/94‑1 (MQ=60)

                                                                              GAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGA                 <  SRR4302540.8163077/94‑1 (MQ=60)

                                                                               AAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAA                <  SRR4302540.8041848/94‑1 (MQ=60)

                                                                               AAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAA                >  SRR4302540.8495328/1‑94 (MQ=60)

                                                                               AAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAA                <  SRR4302540.2792460/94‑1 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT              >  SRR4302540.1827860/1‑94 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT              >  SRR4302540.8863496/1‑94 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT              >  SRR4302540.7685651/1‑94 (MQ=60)

                                                                                 ATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAT              >  SRR4302540.1603454/1‑94 (MQ=60)

                                                                                  TCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATT             <  SRR4302540.6020652/94‑1 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT            >  SRR4302540.6492878/1‑94 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT            >  SRR4302540.9821602/1‑94 (MQ=60)

                                                                                   CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT            <  SRR4302540.7032590/94‑1 (MQ=60)

                                                                                    ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTT           >  SRR4302540.6468184/1‑94 (MQ=60)

                                                                                       GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA        <  SRR4302540.9180496/94‑1 (MQ=60)

                                                                                       GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA        >  SRR4302540.3974757/1‑94 (MQ=60)

                                                                                        CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG       <  SRR4302540.1229299/94‑1 (MQ=60)

                                                                                        CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG       <  SRR4302540.6914925/94‑1 (MQ=60)

                                                                                        CAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAG       <  SRR4302540.4484155/94‑1 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      >  SRR4302540.3835883/1‑94 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      >  SRR4302540.5121273/1‑94 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      >  SRR4302540.3793018/1‑94 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      >  SRR4302540.6947089/1‑94 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      <  SRR4302540.7594413/94‑1 (MQ=60)

                                                                                         AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC      <  SRR4302540.7900651/94‑1 (MQ=60)

                                                                                          GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT     >  SRR4302540.5991662/1‑94 (MQ=60)

                                                                                          GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT     <  SRR4302540.3064532/94‑1 (MQ=60)

                                                                                           GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG    <  SRR4302540.5886269/94‑1 (MQ=60)

                                                                                            CGGCAACGCAACGCCCCTCAGGACGGCTGGCAACCAACGCCACAGTCTGGTTTTTGCATTTTTTGTTGAAGTACGTGAGAACTTTTTCAGCTGA   >  SRR4302540.3397255/1‑94 (MQ=60)

                                                                                            CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGGCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA   >  SRR4302540.4021982/1‑94 (MQ=60)

                                                                                            CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA   >  SRR4302540.7123907/1‑94 (MQ=60)

                                                                                             GGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA  <  SRR4302540.9460010/94‑1 (MQ=60)

ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA  >  NC_000913/4219341‑4219527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`