Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,219,434 |
A→G |
A211A (GCT→GCC) |
arp ← |
Arp |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,219,434 | 0 | A | G | 100.0%
| 776.2
/ NA
| 236 | A211A (GCT→GCC) | arp | Arp |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/119); total (117/119) |
Only 100 of 256 total aligned reads displayed.
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > NC_000913/4219344‑4219523
|
caccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAggcggc > 1:6046481/1‑93 (MQ=255)
accaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGgcggca > 2:4320699/1‑93 (MQ=255)
accaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGgcggca > 1:2356481/1‑93 (MQ=255)
ccaGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGTTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaa > 2:4346266/1‑93 (MQ=255)
caGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaac > 2:1672055/1‑93 (MQ=255)
gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgc > 2:3932310/1‑93 (MQ=255)
gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgc > 1:276989/1‑93 (MQ=255)
gTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacac > 2:1361537/1‑91 (MQ=255)
aaTATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaa < 2:6210179/93‑1 (MQ=255)
atatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGgcaacgcaac < 2:3178580/93‑1 (MQ=255)
tatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGcaacgcaacg > 1:1628090/1‑93 (MQ=255)
tatGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGcaacgcaacg > 1:2277734/1‑93 (MQ=255)
atGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCaacgcaacgc < 2:906161/93‑1 (MQ=255)
tGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGcc > 2:5277593/1‑93 (MQ=255)
cTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCt < 1:4790291/93‑1 (MQ=255)
tGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc < 2:595938/93‑1 (MQ=255)
tGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTc < 1:145416/93‑1 (MQ=255)
gCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCa < 2:4573620/93‑1 (MQ=255)
aTAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAggc > 2:5129763/1‑92 (MQ=255)
tAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAc > 1:6267502/1‑93 (MQ=255)
cacTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGc > 2:1439313/1‑93 (MQ=255)
acTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCt < 1:923621/93‑1 (MQ=255)
cTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTg > 2:3304831/1‑93 (MQ=255)
tGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGaaa < 1:1017581/93‑1 (MQ=255)
tGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGaaa > 2:2483577/1‑93 (MQ=255)
gCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACTCCCCTCAGGACGGCTGGAAAc < 1:3175791/93‑1 (MQ=255)
gCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAc > 2:5789400/1‑93 (MQ=255)
ccATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAcc < 2:1830759/93‑1 (MQ=255)
ccATGTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAcc < 2:4826455/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 2:2990226/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 2:2087694/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 2:4413035/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 2:2736446/93‑1 (MQ=255)
aTTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCaa < 1:2881950/93‑1 (MQ=255)
tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc > 2:2189827/1‑93 (MQ=255)
tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc > 2:3660783/1‑93 (MQ=255)
tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc < 2:5409262/93‑1 (MQ=255)
tttGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAc > 1:3881905/1‑93 (MQ=255)
tttGATT‑CATCTTGTCAAAATATCCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACg < 1:4953734/93‑1 (MQ=255)
tGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGc > 1:2606021/1‑93 (MQ=255)
gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc < 1:2961203/93‑1 (MQ=255)
gATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGcc > 1:4066838/1‑93 (MQ=255)
tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa < 1:54814/93‑1 (MQ=255)
tCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCaaa > 2:576370/1‑93 (MQ=255)
cATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGt > 2:3245362/1‑93 (MQ=255)
aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc < 1:5559436/93‑1 (MQ=255)
aTCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTc < 2:6026232/93‑1 (MQ=255)
cTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTg < 2:1012283/93‑1 (MQ=255)
ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg < 1:826311/93‑1 (MQ=255)
ttGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTgg < 1:1580574/93‑1 (MQ=255)
tGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGt < 1:4587851/93‑1 (MQ=255)
tGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGt < 2:4616623/93‑1 (MQ=255)
gTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGtt > 1:446622/1‑93 (MQ=255)
cAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAACCCAACGCCAAAGTCTGGtttt < 1:5011440/93‑1 (MQ=255)
aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt > 2:1610260/1‑93 (MQ=255)
aaaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGttttt < 1:1690775/93‑1 (MQ=255)
aaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTg < 2:370341/93‑1 (MQ=255)
aaaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTg < 1:6083518/93‑1 (MQ=255)
aaTATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGc < 2:5493405/93‑1 (MQ=255)
atatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGct > 2:975907/1‑92 (MQ=255)
tatGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAt < 1:1141983/93‑1 (MQ=255)
atGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtt > 2:322749/1‑93 (MQ=255)
atGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtt < 1:3936741/93‑1 (MQ=255)
atGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtt < 1:556795/93‑1 (MQ=255)
gCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttt > 2:5220393/1‑93 (MQ=255)
gCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttt > 2:3371450/1‑93 (MQ=255)
gCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttt < 1:721271/93‑1 (MQ=255)
tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt > 1:1320073/1‑93 (MQ=255)
tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt > 2:313410/1‑93 (MQ=255)
tttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCAtttttt > 2:75210/1‑93 (MQ=255)
ttCATAACTAGCCCGAAATCACCGCAGGCGGCATCGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttg < 2:2811114/93‑1 (MQ=255)
ttCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttg > 1:948029/1‑93 (MQ=255)
tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt < 1:3660308/93‑1 (MQ=255)
tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt < 2:1122489/93‑1 (MQ=255)
tCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgt > 2:4749620/1‑93 (MQ=255)
cATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACTGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgtt < 1:3374249/93‑1 (MQ=255)
cATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgtt < 1:4742721/93‑1 (MQ=255)
aTAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTttgttg > 1:5417943/1‑93 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa > 2:862229/1‑93 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa < 2:3362046/93‑1 (MQ=255)
aaCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGaa > 1:4354207/1‑93 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg < 1:764995/93‑1 (MQ=255)
aCTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAg < 1:1565563/93‑1 (MQ=255)
cTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGt < 2:4918722/93‑1 (MQ=255)
tAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTg < 2:608659/93‑1 (MQ=255)
aGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGc < 1:648388/93‑1 (MQ=255)
cccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGt > 2:4475231/1‑93 (MQ=255)
ccGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGAGCGTg > 2:1714690/1‑93 (MQ=255)
cGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTga < 1:5240901/93‑1 (MQ=255)
gAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTgag < 1:59474/93‑1 (MQ=255)
aTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGaaa > 1:2039850/1‑93 (MQ=255)
aTCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGaaa > 2:1488869/1‑93 (MQ=255)
ccGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtttt > 1:4166900/1‑93 (MQ=255)
ccGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAAtttt > 1:3769066/1‑93 (MQ=255)
gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc > 2:5944194/1‑93 (MQ=255)
gcaggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTc < 1:2388093/93‑1 (MQ=255)
caggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCa < 2:2636147/93‑1 (MQ=255)
caggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCa < 2:3795427/93‑1 (MQ=255)
aggcggCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAg > 2:7482/1‑93 (MQ=255)
ggcggcAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGc > 1:5822356/1‑93 (MQ=255)
|
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > NC_000913/4219344‑4219523
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA > NC_000913/4219341‑4219527
|
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCG < SRR4302533.1959619/94‑1 (MQ=60)
TCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGG < SRR4302533.5989179/94‑1 (MQ=60)
CCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCGAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGC > SRR4302533.4429136/1‑94 (MQ=60)
CCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGC > SRR4302533.6083112/1‑94 (MQ=60)
CACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCA > SRR4302533.2371050/1‑94 (MQ=60)
ACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAA > SRR4302533.6068374/1‑94 (MQ=60)
CCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAAC < SRR4302533.5521112/94‑1 (MQ=60)
CAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATCACTAGACCGAAATCACCGCAGGCGGCAACG > SRR4302533.4891854/1‑94 (MQ=60)
AGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGC > SRR4302533.278679/1‑94 (MQ=60)
GTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCA > SRR4302533.1575271/1‑94 (MQ=60)
TAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAA > SRR4302533.997822/1‑94 (MQ=60)
AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC < SRR4302533.430704/94‑1 (MQ=60)
AATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAAC > SRR4302533.797860/1‑94 (MQ=60)
ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG > SRR4302533.2291840/1‑94 (MQ=60)
ATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG > SRR4302533.1637949/1‑94 (MQ=60)
AGATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACG > SRR4302533.5977178/1‑94 (MQ=60)
TGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCC < SRR4302533.1120262/94‑1 (MQ=60)
GGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCC < SRR4302533.702365/94‑1 (MQ=60)
CTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTC < SRR4302533.4819312/94‑1 (MQ=60)
TGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCA < SRR4302533.146346/94‑1 (MQ=60)
CCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGG < SRR4302533.4706327/94‑1 (MQ=60)
CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA > SRR4302533.5480663/1‑94 (MQ=60)
CATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGA < SRR4302533.3725622/94‑1 (MQ=60)
ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC > SRR4302533.3266748/1‑94 (MQ=60)
ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC > SRR4302533.6304952/1‑94 (MQ=60)
ATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGAC < SRR4302533.2372142/94‑1 (MQ=60)
AACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGG > SRR4302533.2964095/1‑94 (MQ=60)
ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG > SRR4302533.3792766/1‑94 (MQ=60)
ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG < SRR4302533.929046/94‑1 (MQ=60)
ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG > SRR4302533.1634786/1‑94 (MQ=60)
ACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTG < SRR4302533.4017739/94‑1 (MQ=60)
CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG > SRR4302533.1223263/1‑94 (MQ=60)
CTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGG > SRR4302533.2704657/1‑94 (MQ=60)
TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA > SRR4302533.4432627/1‑94 (MQ=60)
TGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGA > SRR4302533.2875866/1‑94 (MQ=60)
GATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAA < SRR4302533.2402499/94‑1 (MQ=60)
TGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAC < SRR4302533.1023564/94‑1 (MQ=60)
GCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACTCCCCTCAGGACGGCTGGAAACC < SRR4302533.3195327/94‑1 (MQ=60)
GCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACC < SRR4302533.5987649/94‑1 (MQ=60)
CCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCA < SRR4302533.5584409/94‑1 (MQ=60)
CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA < SRR4302533.695553/94‑1 (MQ=60)
CATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAA > SRR4302533.5495395/1‑94 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC > SRR4302533.6108452/1‑94 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC < SRR4302533.2899680/94‑1 (MQ=60)
ATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAAC > SRR4302533.3905594/1‑94 (MQ=60)
TTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACG > SRR4302533.3651285/1‑94 (MQ=60)
TTTGATT‑CATCTTGTCAAAATATCCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGC < SRR4302533.4983740/94‑1 (MQ=60)
TTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGC > SRR4302533.2622027/1‑94 (MQ=60)
TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC < SRR4302533.4943855/94‑1 (MQ=60)
TGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCC > SRR4302533.4091596/1‑94 (MQ=60)
GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA < SRR4302533.2979306/94‑1 (MQ=60)
GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA < SRR4302533.4808520/94‑1 (MQ=60)
GATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCA < SRR4302533.1538311/94‑1 (MQ=60)
TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG < SRR4302533.336929/94‑1 (MQ=60)
TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG < SRR4302533.55186/94‑1 (MQ=60)
TCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAG < SRR4302533.5747730/94‑1 (MQ=60)
CATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTC < SRR4302533.9535/94‑1 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302533.894790/94‑1 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302533.2717278/94‑1 (MQ=60)
ATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCT < SRR4302533.5593038/94‑1 (MQ=60)
actttgCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGCCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302533.4962029/88‑1 (MQ=60)
TCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTG < SRR4302533.895010/94‑1 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG > SRR4302533.1338354/1‑94 (MQ=60)
CTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGG > SRR4302533.3982877/1‑94 (MQ=60)
TTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGT < SRR4302533.831155/94‑1 (MQ=60)
TTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGT < SRR4302533.1590092/94‑1 (MQ=60)
TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT > SRR4302533.449296/1‑94 (MQ=60)
TGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTT < SRR4302533.4615641/94‑1 (MQ=60)
TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT > SRR4302533.5068302/1‑94 (MQ=60)
TCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTT > SRR4302533.2036221/1‑94 (MQ=60)
CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAACCCAACGCCAAAGTCTGGTTTTT < SRR4302533.5041804/94‑1 (MQ=60)
CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT > SRR4302533.2491134/1‑94 (MQ=60)
CAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTT > SRR4302533.3927607/1‑94 (MQ=60)
AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTG < SRR4302533.1701018/94‑1 (MQ=60)
AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTG < SRR4302533.2910140/94‑1 (MQ=60)
AAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTC > SRR4302533.4149430/1‑94 (MQ=60)
AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC > SRR4302533.4724245/1‑94 (MQ=60)
AAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGC < SRR4302533.6120302/94‑1 (MQ=60)
AATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCA < SRR4302533.6336/94‑1 (MQ=60)
TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT < SRR4302533.6226897/94‑1 (MQ=60)
TATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATT < SRR4302533.1148791/94‑1 (MQ=60)
ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT < SRR4302533.560098/94‑1 (MQ=60)
ATGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTT < SRR4302533.3960772/94‑1 (MQ=60)
TGCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGGAACCAACGCCAAAGTCTGGTTTTTGCATTTT > SRR4302533.4573021/1‑94 (MQ=60)
GCTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTT < SRR4302533.725527/94‑1 (MQ=60)
CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT < SRR4302533.1510745/94‑1 (MQ=60)
CTTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTT > SRR4302533.1327998/1‑94 (MQ=60)
TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG > SRR4302533.6269420/1‑94 (MQ=60)
TTTCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTG > SRR4302533.953600/1‑94 (MQ=60)
TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT < SRR4302533.3682816/94‑1 (MQ=60)
TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT > SRR4302533.3037684/1‑94 (MQ=60)
TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT < SRR4302533.2242195/94‑1 (MQ=60)
TCATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTT < SRR4302533.1674678/94‑1 (MQ=60)
CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACTGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG < SRR4302533.3395086/94‑1 (MQ=60)
CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG < SRR4302533.4771471/94‑1 (MQ=60)
CATAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTG > SRR4302533.5450534/1‑94 (MQ=60)
TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA > SRR4302533.1174034/1‑94 (MQ=60)
TAACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAA > SRR4302533.4380489/1‑94 (MQ=60)
AACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAG < SRR4302533.5037308/94‑1 (MQ=60)
ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT < SRR4302533.769501/94‑1 (MQ=60)
ACTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGT < SRR4302533.1574991/94‑1 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG > SRR4302533.5656246/1‑94 (MQ=60)
CTAGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTG < SRR4302533.43370/94‑1 (MQ=60)
AGCCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCG < SRR4302533.652211/94‑1 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG > SRR4302533.5156944/1‑94 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG < SRR4302533.2214393/94‑1 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTG < SRR4302533.1604492/94‑1 (MQ=60)
CCCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAAACAACGCCAAAGTCTGGTTTTTGCATTTTTTGATGAAGTGCGTG > SRR4302533.353513/1‑94 (MQ=60)
CCGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGA > SRR4302533.1960837/1‑94 (MQ=60)
CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG > SRR4302533.767847/1‑94 (MQ=60)
CGAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAG < SRR4302533.5272407/94‑1 (MQ=60)
GAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGA > SRR4302533.1003403/1‑94 (MQ=60)
GAAATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGA < SRR4302533.59864/94‑1 (MQ=60)
AATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAA < SRR4302533.2313131/94‑1 (MQ=60)
AATCACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAA > SRR4302533.2052426/1‑94 (MQ=60)
CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT > SRR4302533.5416798/1‑94 (MQ=60)
CACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTT < SRR4302533.74103/94‑1 (MQ=60)
ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGCAGTGCGCGAGAAATTTT > SRR4302533.379579/1‑94 (MQ=60)
ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTT > SRR4302533.3792175/1‑94 (MQ=60)
ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTT > SRR4302533.559283/1‑94 (MQ=60)
ACCGCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTT > SRR4302533.4192149/1‑94 (MQ=60)
GCAGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCA < SRR4302533.2402847/94‑1 (MQ=60)
AGGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGC > SRR4302533.5857525/1‑94 (MQ=60)
GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT > SRR4302533.1038590/1‑94 (MQ=60)
GGCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGCTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCT > SRR4302533.4602019/1‑94 (MQ=60)
GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG < SRR4302533.1929060/94‑1 (MQ=60)
GCGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTG < SRR4302533.3126592/94‑1 (MQ=60)
CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA > SRR4302533.693013/1‑94 (MQ=60)
CGGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGA > SRR4302533.2876160/1‑94 (MQ=60)
GGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA < SRR4302533.2455489/94‑1 (MQ=60)
|
ATCCACCAGTAATATGGCTGCCATAACACTGATGCCATTTGATTCCATCTTGTCAAAATATGCTTTCATAACTAGCCCGAAATCACCGCAGGCAGCAACGCAACGCCCCTCAGGACGGCTGGAAACCAACGCCAAAGTCTGGTTTTTGCATTTTTTGTTGAAGTGCGTGAGAAATTTTTCAGCTGAA > NC_000913/4219341‑4219527
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
