Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,261,143 T→C E223G (GAA→GGA)  qor ← quinone oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,261,1430TC99.7% 1230.4 / ‑5.0 387E223G (GAA→GGA) qorquinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (180/206);  total (181/206)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.81e-01

Only 100 of 413 total aligned reads displayed.

AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA  >  NC_000913/4261053‑4261232
                                                                                          |                                                                                         
agaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTccc                                                                                         >  1:1517193/1‑93 (MQ=255)
agaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTccc                                                                                         <  2:1361622/93‑1 (MQ=255)
 gaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc                                                                                        >  2:8346502/1‑93 (MQ=255)
     gCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgt                                                                                    <  1:6939592/93‑1 (MQ=255)
        tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc                                                                                 >  2:1666951/1‑93 (MQ=255)
        tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc                                                                                 <  2:6417341/93‑1 (MQ=255)
          aGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtctc                                                                               <  2:5462628/93‑1 (MQ=255)
          aGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtctc                                                                               <  1:2830197/93‑1 (MQ=255)
           gTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTctct                                                                              <  1:134874/93‑1 (MQ=255)
           gTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTctct                                                                              >  2:188242/1‑93 (MQ=255)
              cacaCCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGcc                                                                           <  2:2574760/93‑1 (MQ=255)
                cacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCa                                                                         <  2:7566017/93‑1 (MQ=255)
                 acCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAc                                                                        <  2:9728365/93‑1 (MQ=255)
                 acCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAc                                                                        <  2:6113631/93‑1 (MQ=255)
                  ccGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACg                                                                       <  2:1454711/93‑1 (MQ=255)
                        aCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCg                                                                 >  1:2700118/1‑93 (MQ=255)
                        aCCGCACCTCATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCg                                                                 <  1:8527093/93‑1 (MQ=255)
                          cGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTa                                                               <  1:7740752/93‑1 (MQ=255)
                          cGCACCTGATGAGTCGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTa                                                               <  1:5690046/93‑1 (MQ=255)
                           gCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTac                                                              <  1:7545097/93‑1 (MQ=255)
                            cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca                                                             >  2:3351629/1‑93 (MQ=255)
                            cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca                                                             <  2:3188864/93‑1 (MQ=255)
                            cACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTaca                                                             <  1:3943640/93‑1 (MQ=255)
                              ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc                                                           <  2:4821441/93‑1 (MQ=255)
                              ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc                                                           >  2:598620/1‑93 (MQ=255)
                              ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGGCTCTGCCCACGGAATCGTAcacc                                                           >  2:5563061/1‑93 (MQ=255)
                               cTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGCCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacca                                                          <  2:3993289/93‑1 (MQ=255)
                               cTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacca                                                          >  2:7589739/1‑93 (MQ=255)
                               cTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacca                                                          <  2:1143667/93‑1 (MQ=255)
                                tgatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcaccac                                                         <  1:2236419/93‑1 (MQ=255)
                                tgatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcaccac                                                         >  2:7819633/1‑93 (MQ=255)
                                tgatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGGCTCTGCCCACGGAATCGTAcaccac                                                         >  1:9448585/1‑93 (MQ=255)
                                tgatgaGTTGCAAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcaccac                                                         <  1:7183929/93‑1 (MQ=255)
                                   tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg                                                      >  2:6673127/1‑93 (MQ=255)
                                   tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg                                                      >  1:4770821/1‑93 (MQ=255)
                                   tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg                                                      >  1:8436632/1‑93 (MQ=255)
                                    gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc                                                     <  1:9756775/93‑1 (MQ=255)
                                    gaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACgcgc                                                     >  2:7035977/1‑93 (MQ=255)
                                      gTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAc                                                   <  1:688282/93‑1 (MQ=255)
                                      gTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAc                                                   <  1:2516417/93‑1 (MQ=255)
                                           cAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGTATCGTACACCACGCGCACTTTCt                                              >  2:7202557/1‑93 (MQ=255)
                                            aaaaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCtt                                             >  2:4226297/1‑93 (MQ=255)
                                             aaaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTa                                            <  1:9166519/93‑1 (MQ=255)
                                              aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc                                           >  1:5544618/1‑93 (MQ=255)
                                              aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc                                           >  1:7315390/1‑93 (MQ=255)
                                              aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc                                           <  2:3461937/93‑1 (MQ=255)
                                               aCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAcc                                          >  2:7496023/1‑93 (MQ=255)
                                               aCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAcc                                          >  1:4325461/1‑93 (MQ=255)
                                               aCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAcc                                          >  1:8993971/1‑93 (MQ=255)
                                                cTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccg                                         <  2:375531/93‑1 (MQ=255)
                                                cTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccg                                         >  1:4497398/1‑93 (MQ=255)
                                                 tGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccgc                                        <  2:2054176/93‑1 (MQ=255)
                                                     cATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGt                                    <  2:5091265/93‑1 (MQ=255)
                                                      aTTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTg                                   >  1:10032446/1‑93 (MQ=255)
                                                      aTTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTg                                   >  2:9559800/1‑93 (MQ=255)
                                                       ttAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGa                                  >  1:6618635/1‑93 (MQ=255)
                                                       ttAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGa                                  >  1:2430873/1‑93 (MQ=255)
                                                        tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAt                                 >  1:6198699/1‑93 (MQ=255)
                                                         aaGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAtc                                <  1:602931/93‑1 (MQ=255)
                                                         aaGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAtc                                >  1:1664983/1‑93 (MQ=255)
                                                           gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAtctc                              >  2:1648273/1‑93 (MQ=255)
                                                           gCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAtctc                              >  1:4569702/1‑93 (MQ=255)
                                                            ccGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATctct                             <  2:9002849/93‑1 (MQ=255)
                                                            cagcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATctct                             <  1:6791573/91‑1 (MQ=255)
                                                              gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt                           >  1:6523671/1‑93 (MQ=255)
                                                              gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt                           <  2:8025300/93‑1 (MQ=255)
                                                              gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt                           >  1:8201119/1‑93 (MQ=255)
                                                                ggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTa                         <  1:4143812/93‑1 (MQ=255)
                                                                  cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAc                       <  1:7835098/93‑1 (MQ=255)
                                                                  cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAc                       <  1:8871237/93‑1 (MQ=255)
                                                                   gTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAcc                      <  1:1294569/93‑1 (MQ=255)
                                                                   gTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAcc                      <  2:4410703/93‑1 (MQ=255)
                                                                   gTTGCAGGCAATCCAGCGACCGGCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAcc                      >  1:5849129/1‑93 (MQ=255)
                                                                     tGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGc                    >  1:4739343/1‑93 (MQ=255)
                                                                       cAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTc                  <  2:3587152/93‑1 (MQ=255)
                                                                        aGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAGCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCg                 >  1:6369251/1‑93 (MQ=255)
                                                                         ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCgc                >  2:2244484/1‑92 (MQ=255)
                                                                         ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGa                <  2:9266216/93‑1 (MQ=255)
                                                                         ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGa                >  1:9578793/1‑93 (MQ=255)
                                                                         ggCAATCCAGCGACCGTCCCCAGGAGTCTCTGCCCACGGAATCGTACACCACGCGAACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCgc                >  1:2087777/1‑92 (MQ=255)
                                                                         ggCAATCAAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGa                >  2:4657677/1‑93 (MQ=255)
                                                                          gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAc               >  2:9402041/1‑93 (MQ=255)
                                                                           cAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAcc              <  2:7968647/93‑1 (MQ=255)
                                                                            aaTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCa             >  1:9834469/1‑93 (MQ=255)
                                                                             aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg            <  2:3072034/93‑1 (MQ=255)
                                                                             aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg            <  1:1909623/93‑1 (MQ=255)
                                                                             aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg            <  2:6292897/93‑1 (MQ=255)
                                                                             aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTCACCGCCGGTGATCTCTTTTAACCGCTCGACCAg            >  1:2604201/1‑93 (MQ=255)
                                                                              tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGa           <  1:4946621/93‑1 (MQ=255)
                                                                                cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAta         >  2:5837722/1‑92 (MQ=255)
                                                                                cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATc         >  1:3468132/1‑93 (MQ=255)
                                                                                cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATc         <  2:8854610/93‑1 (MQ=255)
                                                                                cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATc         <  1:7381422/93‑1 (MQ=255)
                                                                                  gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCct       >  1:7248899/1‑93 (MQ=255)
                                                                                  gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCct       <  1:7934342/93‑1 (MQ=255)
                                                                                    gACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGCTCctct     >  1:322356/1‑93 (MQ=255)
                                                                                    gACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCctct     >  1:356706/1‑93 (MQ=255)
                                                                                    gACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCctct     <  1:5269345/93‑1 (MQ=255)
                                                                                     aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCtt    >  2:8593930/1‑93 (MQ=255)
                                                                                      ccGTCCCCAGGTGCCTCTGCCCACGGAATTGTACACCACGCGCACTTTCTTACCGCCGGCGATCTCTTTTAACCGCTCGACCAGAGCctctcc   >  2:8238842/1‑91 (MQ=255)
                                                                                          |                                                                                         
AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA  >  NC_000913/4261053‑4261232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 233 total aligned reads displayed.
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT  >  NC_000913/4261050‑4261236
                                                                                             |                                                                                             
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTC                                                                                               >  SRR4302540.7589280/1‑94 (MQ=60)
 TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC                                                                                              <  SRR4302540.5853165/94‑1 (MQ=60)
 TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC                                                                                              >  SRR4302540.517496/1‑94 (MQ=60)
  GAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCC                                                                                             <  SRR4302540.8760457/94‑1 (MQ=60)
   AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCC                                                                                            >  SRR4302540.3731383/1‑94 (MQ=60)
   AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCC                                                                                            <  SRR4302540.5242313/94‑1 (MQ=60)
   AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCC                                                                                            >  SRR4302540.1462418/1‑94 (MQ=60)
     AATGCCTTAGGTCACACCGGTAACCATGCCGGAAGAGTTGCCAAAACTGCCCATTAAGCCGCGGCGGTGCAGGCAATCCAGCGACCGTCCCCAG                                                                                          <  SRR4302540.1521113/94‑1 (MQ=44)
     AATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAG                                                                                          <  SRR4302540.2162277/94‑1 (MQ=60)
     AATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAG                                                                                          <  SRR4302540.2166594/94‑1 (MQ=60)
      ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGG                                                                                         >  SRR4302540.4808857/1‑94 (MQ=60)
        GCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTG                                                                                       <  SRR4302540.7016835/94‑1 (MQ=60)
        GCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGCG                                                                                       >  SRR4302540.615004/1‑94 (MQ=60)
         CCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGT                                                                                      >  SRR4302540.6762711/1‑94 (MQ=60)
          CTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTC                                                                                     >  SRR4302540.4816908/1‑94 (MQ=60)
          CTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTC                                                                                     <  SRR4302540.3228189/94‑1 (MQ=60)
          CTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTC                                                                                     >  SRR4302540.1982711/1‑94 (MQ=60)
           TAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCT                                                                                    >  SRR4302540.3710228/1‑94 (MQ=60)
           TAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCT                                                                                    >  SRR4302540.5927384/1‑94 (MQ=60)
            AAGTGCACACCGGTAACCGCACCTGATGAGTTGCCAAATCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTC                                                                                   <  SRR4302540.587004/94‑1 (MQ=60)
             AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT                                                                                  <  SRR4302540.4171451/94‑1 (MQ=60)
             AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT                                                                                  <  SRR4302540.7267435/94‑1 (MQ=60)
             AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT                                                                                  <  SRR4302540.2860810/94‑1 (MQ=60)
              GTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTG                                                                                 <  SRR4302540.136288/94‑1 (MQ=60)
               TTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGC                                                                                >  SRR4302540.1279569/1‑94 (MQ=60)
                TCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCC                                                                               <  SRR4302540.1632095/94‑1 (MQ=60)
                 CACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCC                                                                              >  SRR4302540.1493396/1‑94 (MQ=60)
                  ACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCA                                                                             >  SRR4302540.7555491/1‑94 (MQ=60)
                    ACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACG                                                                           >  SRR4302540.2640230/1‑94 (MQ=60)
                     CCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGG                                                                          <  SRR4302540.8989179/94‑1 (MQ=60)
                     CCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGG                                                                          >  SRR4302540.1591460/1‑94 (MQ=60)
                     CCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGG                                                                          >  SRR4302540.3056707/1‑94 (MQ=60)
                      CGNTNNNCGNACCTGATNAGNNNCCNAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGA                                                                         <  SRR4302540.932966/94‑1 (MQ=60)
                      CGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGA                                                                         >  SRR4302540.7801839/1‑94 (MQ=60)
                       GGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAA                                                                        <  SRR4302540.5496564/94‑1 (MQ=60)
                        GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT                                                                       >  SRR4302540.4495916/1‑94 (MQ=60)
                        GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT                                                                       <  SRR4302540.7400122/94‑1 (MQ=60)
                        GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT                                                                       <  SRR4302540.6968080/94‑1 (MQ=60)
                        GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT                                                                       <  SRR4302540.6968079/94‑1 (MQ=60)
                        GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT                                                                       >  SRR4302540.6665616/1‑94 (MQ=60)
                          AACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG                                                                     >  SRR4302540.7880545/1‑94 (MQ=60)
                          AACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG                                                                     >  SRR4302540.2729259/1‑94 (MQ=60)
                           ACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGT                                                                    <  SRR4302540.8626175/94‑1 (MQ=60)
                           ACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGT                                                                    <  SRR4302540.5864565/94‑1 (MQ=60)
                           ACCGCACCTCATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGT                                                                    <  SRR4302540.8626174/94‑1 (MQ=60)
                            CCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTA                                                                   <  SRR4302540.9924984/94‑1 (MQ=60)
                             CGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAC                                                                  <  SRR4302540.2819557/94‑1 (MQ=60)
                             CGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAC                                                                  >  SRR4302540.2495927/1‑94 (MQ=60)
                             CGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAC                                                                  <  SRR4302540.7831124/94‑1 (MQ=60)
                             CGCACCTGATGAGTCGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAC                                                                  <  SRR4302540.5752684/94‑1 (MQ=60)
                              GCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACA                                                                 <  SRR4302540.7629653/94‑1 (MQ=60)
                               CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC                                                                <  SRR4302540.9348045/94‑1 (MQ=60)
                               CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC                                                                >  SRR4302540.9093366/1‑94 (MQ=60)
                               CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC                                                                <  SRR4302540.605779/94‑1 (MQ=60)
                               CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC                                                                <  SRR4302540.3986233/94‑1 (MQ=60)
                                ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC                                                               >  SRR4302540.7356283/1‑94 (MQ=60)
                                ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC                                                               <  SRR4302540.1511955/94‑1 (MQ=60)
                                ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC                                                               >  SRR4302540.4422510/1‑94 (MQ=60)
                                 CCTGATGATTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCTAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA                                                              <  SRR4302540.9308673/94‑1 (MQ=60)
                                 CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA                                                              >  SRR4302540.1592790/1‑94 (MQ=60)
                                 CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA                                                              <  SRR4302540.5905737/94‑1 (MQ=60)
                                  CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC                                                             <  SRR4302540.463854/94‑1 (MQ=60)
                                  CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC                                                             >  SRR4302540.3695935/1‑94 (MQ=60)
                                  CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGGCTCTGCCCACGGAATCGTACACCAC                                                             >  SRR4302540.9560748/1‑94 (MQ=60)
                                   TGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACG                                                            <  SRR4302540.2260476/94‑1 (MQ=60)
                                   TGATGAGTTGCAAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACG                                                            <  SRR4302540.7264014/94‑1 (MQ=60)
                                     ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG                                                          <  SRR4302540.2644722/94‑1 (MQ=60)
                                     ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG                                                          >  SRR4302540.4821782/1‑94 (MQ=60)
                                     ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG                                                          <  SRR4302540.8860107/94‑1 (MQ=60)
                                     ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG                                                          >  SRR4302540.8534576/1‑94 (MQ=60)
                                     ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG                                                          >  SRR4302540.2576011/1‑94 (MQ=60)
                                      TGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGC                                                         >  SRR4302540.1729830/1‑94 (MQ=60)
                                      TGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGC                                                         <  SRR4302540.2571258/94‑1 (MQ=60)
                                       GAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCA                                                        <  SRR4302540.9871235/94‑1 (MQ=60)
                                        AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAC                                                       >  SRR4302540.4939203/1‑94 (MQ=60)
                                        AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAC                                                       >  SRR4302540.1358160/1‑94 (MQ=60)
                                         GTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACT                                                      >  SRR4302540.3581455/1‑94 (MQ=60)
                                         GTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACT                                                      <  SRR4302540.2543599/94‑1 (MQ=60)
                                         GTT‑CCAAAACTGACCATTAACCCGGGGCGTGGCAGGCAATCCAGCGACCGGCCCCAGGTGGCTCTGCCCACGGAATCGTACACCACGCGCACTT                                                     <  SRR4302540.8611855/94‑1 (MQ=60)
                                          TTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTT                                                     >  SRR4302540.9016446/1‑94 (MQ=60)
                                          TTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTT                                                     <  SRR4302540.6827855/94‑1 (MQ=60)
                                            GCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTC                                                   <  SRR4302540.6850729/94‑1 (MQ=60)
                                            GCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTC                                                   >  SRR4302540.4329987/1‑94 (MQ=60)
                                             CCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCT                                                  <  SRR4302540.6119151/94‑1 (MQ=60)
                                             CCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCT                                                  <  SRR4302540.9233178/94‑1 (MQ=60)
                                              CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT                                                 <  SRR4302540.4582430/94‑1 (MQ=60)
                                              CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT                                                 >  SRR4302540.9824184/1‑94 (MQ=60)
                                              CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT                                                 >  SRR4302540.1989467/1‑94 (MQ=60)
                                               AAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTA                                                >  SRR4302540.3501923/1‑94 (MQ=60)
                                                AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCCCTTTCTTAC                                               >  SRR4302540.5605696/1‑94 (MQ=60)
                                                AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC                                               >  SRR4302540.5605695/1‑94 (MQ=60)
                                                AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC                                               <  SRR4302540.9276499/94‑1 (MQ=60)
                                                AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC                                               >  SRR4302540.7397079/1‑94 (MQ=60)
                                                AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCACACGGAATCCTACAACACGCGCCCTTTCTTAC                                               >  SRR4302540.5605697/1‑94 (MQ=60)
                                                 AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              <  SRR4302540.1748340/94‑1 (MQ=60)
                                                 AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              <  SRR4302540.3165169/94‑1 (MQ=60)
                                                 AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              <  SRR4302540.9697882/94‑1 (MQ=60)
                                                 AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              >  SRR4302540.9101859/1‑94 (MQ=60)
                                                 AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              >  SRR4302540.4372554/1‑94 (MQ=60)
                                                 AACTGACCATGAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC                                              <  SRR4302540.9885603/94‑1 (MQ=60)
                                                  ACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCG                                             >  SRR4302540.4546156/1‑94 (MQ=60)
                                                  ACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCC                                             >  SRR4302540.1139084/1‑94 (MQ=60)
                                                   CTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGC                                            >  SRR4302540.7248698/1‑94 (MQ=60)
                                                   CTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGC                                            <  SRR4302540.8626118/94‑1 (MQ=60)
                                                    TGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCC                                           >  SRR4302540.7451202/1‑94 (MQ=60)
                                                      ACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGG                                         >  SRR4302540.7453120/1‑94 (MQ=60)
                                                      ACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGG                                         >  SRR4302540.7403853/1‑94 (MQ=60)
                                                        CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTG                                       >  SRR4302540.8142988/1‑94 (MQ=60)
                                                        CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTG                                       >  SRR4302540.10149143/1‑94 (MQ=60)
                                                         ATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGA                                      >  SRR4302540.6691928/1‑94 (MQ=60)
                                                          TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT                                     >  SRR4302540.6267704/1‑94 (MQ=60)
                                                          TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT                                     >  SRR4302540.7915483/1‑94 (MQ=60)
                                                          TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT                                     <  SRR4302540.6873494/94‑1 (MQ=60)
                                                           TAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATC                                    >  SRR4302540.1683109/1‑94 (MQ=60)
                                                            AAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCT                                   <  SRR4302540.9637338/94‑1 (MQ=60)
                                                            AAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCT                                   <  SRR4302540.609388/94‑1 (MQ=60)
                                                             AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTC                                  >  SRR4302540.4619029/1‑94 (MQ=60)
                                                              GCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCT                                 >  SRR4302540.8451827/1‑94 (MQ=60)
                                                              GCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCT                                 <  SRR4302540.2301558/94‑1 (MQ=60)
                                                              GCCGCGGCGTTGCAGGCAATCCAGCCACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCT                                 <  SRR4302540.2406538/94‑1 (MQ=60)
                                                               CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTT                                <  SRR4302540.7860236/94‑1 (MQ=60)
                                                               CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTT                                <  SRR4302540.5141906/94‑1 (MQ=60)
                                                               CAGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTT                                <  SRR4302540.6866686/94‑1 (MQ=60)
                                                                CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGTTCTCTTT                               >  SRR4302540.3883906/1‑94 (MQ=60)
                                                                CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT                               <  SRR4302540.9107397/94‑1 (MQ=60)
                                                                CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT                               >  SRR4302540.7278911/1‑94 (MQ=60)
                                                                CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT                               >  SRR4302540.6596127/1‑94 (MQ=60)
                                                                CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT                               >  SRR4302540.8296422/1‑94 (MQ=60)
                                                                 GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTT                              <  SRR4302540.987536/94‑1 (MQ=60)
                                                                  CGTCGTTGCAGGCGATCCAGCGCCCGTCCCCAGGTGTCTCTGGCCGCGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTA                             <  SRR4302540.718543/94‑1 (MQ=60)
                                                                   GTCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCTACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.5492285/94‑1 (MQ=60)
                                                                   GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.3526034/94‑1 (MQ=60)
                                                                   GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.3299178/94‑1 (MQ=60)
                                                                   GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.4188655/94‑1 (MQ=60)
                                                                   GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.7743021/94‑1 (MQ=60)
                                                                   GGCGGTGCATGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGTAATCGTACGCCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA                            <  SRR4302540.4188654/94‑1 (MQ=60)
                                                                    GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAC                           >  SRR4302540.4553625/1‑94 (MQ=60)
                                                                    GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAC                           <  SRR4302540.2025180/94‑1 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGTCCCCAGTTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          <  SRR4302540.6626738/94‑1 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          <  SRR4302540.8339767/94‑1 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          <  SRR4302540.7926644/94‑1 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          >  SRR4302540.6982683/1‑94 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          <  SRR4302540.8973900/94‑1 (MQ=60)
                                                                     CGTTGCAGGCAATCCAGCGACCGGCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          >  SRR4302540.5913819/1‑94 (MQ=60)
                                                                     CGTTGCAGCCAATCCAGCGACCGTCCCCAGGTGTCTCTGACCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC                          <  SRR4302540.9219723/94‑1 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         >  SRR4302540.2477201/1‑94 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         >  SRR4302540.7591304/1‑94 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         >  SRR4302540.665903/1‑94 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         <  SRR4302540.1307968/94‑1 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         >  SRR4302540.6511178/1‑94 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         >  SRR4302540.6511180/1‑94 (MQ=60)
                                                                      GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG                         <  SRR4302540.1307969/94‑1 (MQ=60)
                                                                       TTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGC                        >  SRR4302540.4789924/1‑94 (MQ=60)
                                                                       TTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGC                        <  SRR4302540.2739877/94‑1 (MQ=60)
                                                                        TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCT                       >  SRR4302540.7490727/1‑94 (MQ=60)
                                                                        TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCT                       <  SRR4302540.4490135/94‑1 (MQ=60)
                                                                          CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAGCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCG                     >  SRR4302540.6440179/1‑94 (MQ=60)
                                                                          CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCG                     <  SRR4302540.2433739/94‑1 (MQ=60)
                                                                          CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCG                     <  SRR4302540.5070313/94‑1 (MQ=60)
                                                                           CGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGA                    <  SRR4302540.5588943/94‑1 (MQ=60)
                                                                           AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGA                    >  SRR4302540.9691915/1‑94 (MQ=60)
                                                                           AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGA                    <  SRR4302540.6873790/94‑1 (MQ=60)
                                                                           AGGCAATCCAGCGACCGTCCCCAGGAGTCTCTGCCCACGGAATCGTACACCACGCGAACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGC                    >  SRR4302540.2110211/1‑94 (MQ=60)
                                                                            GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAC                   <  SRR4302540.81782/94‑1 (MQ=60)
                                                                            GGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAC                   <  SRR4302540.2280247/94‑1 (MQ=60)
                                                                             GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACC                  >  SRR4302540.6442353/1‑94 (MQ=60)
                                                                              CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCA                 >  SRR4302540.9949477/1‑94 (MQ=60)
                                                                               AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG                >  SRR4302540.6410275/1‑94 (MQ=60)
                                                                               AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTCACCGCCGGTGATCTCTTTTAACCGCTCGACCAG                >  SRR4302540.2632295/1‑94 (MQ=60)
                                                                               AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAAGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG                >  SRR4302540.5266320/1‑94 (MQ=60)
                                                                                ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCTGGTGATCTCTTTTAACCGCTCGACCAGA               >  SRR4302540.1280133/1‑94 (MQ=60)
                                                                                ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGA               <  SRR4302540.1930485/94‑1 (MQ=60)
                                                                                 TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT              >  SRR4302540.7365891/1‑94 (MQ=60)
                                                                                 TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT              <  SRR4302540.4726638/94‑1 (MQ=60)
                                                                                 TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT              <  SRR4302540.5000030/94‑1 (MQ=60)
                                                                                 TCCAGCGACCGTCCCCAGGGGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTAACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT              <  SRR4302540.4726639/94‑1 (MQ=60)
                                                                                  CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC             <  SRR4302540.8013158/94‑1 (MQ=60)
                                                                                  CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC             <  SRR4302540.4333917/94‑1 (MQ=60)
                                                                                  CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC             <  SRR4302540.2704282/94‑1 (MQ=60)
                                                                                  CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC             >  SRR4302540.3505888/1‑94 (MQ=60)
                                                                                   CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCC            >  SRR4302540.3508099/1‑94 (MQ=60)
                                                                                   CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCC            >  SRR4302540.9676395/1‑94 (MQ=60)
                                                                                   CAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCAACCAGATCC            >  SRR4302540.8746143/1‑94 (MQ=60)
                                                                                    AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCT           >  SRR4302540.7329783/1‑94 (MQ=60)
                                                                                    AGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCT           >  SRR4302540.4839369/1‑94 (MQ=60)
                                                                                     GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTC          <  SRR4302540.8026818/94‑1 (MQ=60)
                                                                                     GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTC          <  SRR4302540.8026819/94‑1 (MQ=60)
                                                                                     GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTCATCTCTTTTAACCGCTCGACCAGATCCTC          >  SRR4302540.6944894/1‑94 (MQ=60)
                                                                                      CGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGCTCCTCT         >  SRR4302540.325577/1‑94 (MQ=60)
                                                                                       GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACTGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTT        >  SRR4302540.7294004/1‑94 (MQ=60)
                                                                                       GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTT        >  SRR4302540.6359920/1‑94 (MQ=60)
                                                                                       GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTT        <  SRR4302540.4149052/94‑1 (MQ=60)
                                                                                        ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTC       >  SRR4302540.6233346/1‑94 (MQ=60)
                                                                                        ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTC       <  SRR4302540.8418454/94‑1 (MQ=60)
                                                                                         CCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA      <  SRR4302540.9685859/94‑1 (MQ=60)
                                                                                          CGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAC     <  SRR4302540.2532492/94‑1 (MQ=60)
                                                                                           GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG    >  SRR4302540.471982/1‑94 (MQ=60)
                                                                                           GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG    >  SRR4302540.8133833/1‑94 (MQ=60)
                                                                                             CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT  <  SRR4302540.3792287/94‑1 (MQ=60)
                                                                                             CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT  >  SRR4302540.10045760/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT  >  NC_000913/4261050‑4261236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑