Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,261,143 |
T→C |
E223G (GAA→GGA) |
qor ← |
quinone oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,261,143 | 0 | T | C | 100.0%
| 682.3
/ NA
| 215 | E223G (GAA→GGA) | qor | quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/91); total (124/91) |
Only 100 of 226 total aligned reads displayed.
AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA > NC_000913/4261053‑4261232
|
gaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc < 1:4301134/93‑1 (MQ=255)
gaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc > 2:2934699/1‑93 (MQ=255)
gaATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTcccc > 2:3166583/1‑93 (MQ=255)
aaTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCa > 1:2633684/1‑93 (MQ=255)
aaTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCa > 1:4892289/1‑93 (MQ=255)
aTGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAg < 1:361136/93‑1 (MQ=255)
tGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCTAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg < 1:1681810/93‑1 (MQ=255)
tGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg > 1:3909758/1‑93 (MQ=255)
agCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAgg < 1:5032828/92‑1 (MQ=255)
cTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgtgt > 2:3502629/1‑93 (MQ=255)
cTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgtgt < 2:309399/93‑1 (MQ=255)
cTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgtgt > 2:5058787/1‑93 (MQ=255)
cTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgtgt > 2:5031539/1‑93 (MQ=255)
cTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGgtgt > 2:478708/1‑93 (MQ=255)
tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc > 2:3661666/1‑93 (MQ=255)
tAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtc > 1:3451573/1‑93 (MQ=255)
aGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtctc < 1:1462774/93‑1 (MQ=255)
aGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGtctc > 2:6210893/1‑93 (MQ=255)
gTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTctct < 2:4628261/93‑1 (MQ=255)
gTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTctct < 1:3796410/93‑1 (MQ=255)
gTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTctct > 1:5611853/1‑93 (MQ=255)
ttCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTg > 2:722927/1‑93 (MQ=255)
tCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGc > 1:2490513/1‑93 (MQ=255)
cacaCCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGcc < 2:5697115/93‑1 (MQ=255)
acacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGccc < 2:117003/93‑1 (MQ=255)
cacCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCa > 1:5792105/1‑93 (MQ=255)
acCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCAc > 2:5822383/1‑93 (MQ=255)
ccGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACg > 2:2730034/1‑93 (MQ=255)
cGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACgg < 2:2552031/93‑1 (MQ=255)
ggTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGa < 2:1411563/93‑1 (MQ=255)
ggTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGa < 2:5233427/93‑1 (MQ=255)
ggTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGa > 1:1231258/1‑93 (MQ=255)
gTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGaa > 2:4174648/1‑93 (MQ=255)
tAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAt > 1:1531237/1‑93 (MQ=255)
aaCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATc > 1:6084942/1‑93 (MQ=255)
aCCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCg < 2:4132100/93‑1 (MQ=255)
cccTGATGAGTACCCAAAACTGACCATTAAGCCGCCGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTacac < 1:5311169/92‑1 (MQ=255)
ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc > 1:2414901/1‑93 (MQ=255)
ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc > 2:2208206/1‑93 (MQ=255)
ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacc > 1:749573/1‑93 (MQ=255)
ccTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGATGTCTCTGCCCACGGAATCGTAcacc > 1:5162964/1‑93 (MQ=255)
cTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcacca < 2:1636984/93‑1 (MQ=255)
tgatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAcaccac > 2:774468/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTATACCAcg > 1:879310/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcg > 2:4021417/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcg > 2:1011329/1‑93 (MQ=255)
gatgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGGCTCTGCCCACGGAATCGTAcaccacc > 2:3824338/1‑92 (MQ=255)
atgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgc > 2:1776655/1‑93 (MQ=255)
tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg > 2:496054/1‑93 (MQ=255)
tgaGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAcgcg > 2:2432681/1‑93 (MQ=255)
aGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCa < 2:5424287/93‑1 (MQ=255)
gTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAc > 1:953163/1‑93 (MQ=255)
ttGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACt > 2:3995933/1‑93 (MQ=255)
gCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACttt < 2:160227/93‑1 (MQ=255)
cAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCt < 1:5860719/93‑1 (MQ=255)
cAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCt < 2:4617427/93‑1 (MQ=255)
aaaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTa < 1:2695745/93‑1 (MQ=255)
aaaCTGACCATTAAGCCGCGGAGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTa > 1:2158740/1‑93 (MQ=255)
aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc < 1:1005061/93‑1 (MQ=255)
aaCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAc > 2:5998375/1‑93 (MQ=255)
aCTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAcc > 1:1395633/1‑93 (MQ=255)
gACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAccgcc < 2:2633684/93‑1 (MQ=255)
aCCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACAACGCGCACTTTCTTAccgccg > 1:2066223/1‑93 (MQ=255)
aCCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCACACGGAATCGTACACCACGCGCACTTTCTTAccgccg > 1:334873/1‑93 (MQ=255)
cATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGt > 1:5227177/1‑93 (MQ=255)
aTTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAGACCACGCGCACTTTCTTACCGCCGGTg > 1:3070632/1‑93 (MQ=255)
ttAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGa > 2:2419026/1‑93 (MQ=255)
tAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAt > 1:5560779/1‑93 (MQ=255)
ccGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATctct < 1:2780723/93‑1 (MQ=255)
ccGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATctct < 1:4692631/93‑1 (MQ=255)
ccGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTGCTTACCGCCGGTGATctct < 2:6120527/93‑1 (MQ=255)
cgcgGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCtt < 1:5095728/93‑1 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt > 2:2450006/1‑93 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt > 2:4463786/1‑93 (MQ=255)
gcggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCttt > 2:2072946/1‑93 (MQ=255)
cggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCtttt < 1:4342318/93‑1 (MQ=255)
ggcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTa < 2:2336885/93‑1 (MQ=255)
gcgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTaa < 2:3787414/93‑1 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAc > 1:1854123/1‑93 (MQ=255)
cgTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAc < 2:2140795/93‑1 (MQ=255)
gTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAcc < 2:111252/93‑1 (MQ=255)
gTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAcc < 1:2997610/93‑1 (MQ=255)
gCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCt < 1:3243670/93‑1 (MQ=255)
cAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTc > 2:5126099/1‑93 (MQ=255)
ggCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGa > 1:6040776/1‑93 (MQ=255)
gCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAc < 1:1914311/93‑1 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg < 2:2026926/93‑1 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg > 1:1597901/1‑93 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg > 1:198667/1‑93 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg > 1:3578308/1‑93 (MQ=255)
aTCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAg < 1:5284662/93‑1 (MQ=255)
tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGa < 1:309931/93‑1 (MQ=255)
tCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGa < 2:3928147/93‑1 (MQ=255)
ccAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTGCCGCCGGTGATCTCTTTTAACCGCTCGACCAGAt < 1:1052733/93‑1 (MQ=255)
cAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATc > 2:1824977/1‑93 (MQ=255)
aGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATcc < 2:5579958/93‑1 (MQ=255)
aGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATcc < 2:1357778/93‑1 (MQ=255)
gCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCct < 1:663478/93‑1 (MQ=255)
aCCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCtt < 1:1333513/93‑1 (MQ=255)
ccGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTc < 2:4892289/93‑1 (MQ=255)
|
AGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCA > NC_000913/4261053‑4261232
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > NC_000913/4261050‑4261236
|
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTC < SRR4302533.4569254/94‑1 (MQ=60)
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC > SRR4302533.2695195/1‑94 (MQ=60)
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC > SRR4302533.2758145/1‑94 (MQ=60)
TGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCC > SRR4302533.1651641/1‑94 (MQ=60)
GAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCC > SRR4302533.5706977/1‑94 (MQ=60)
GAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCA > SRR4302533.2649870/1‑94 (MQ=60)
GAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCA < SRR4302533.298108/94‑1 (MQ=60)
GAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCA < SRR4302533.4327004/94‑1 (MQ=60)
GAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCA > SRR4302533.4921932/1‑94 (MQ=60)
ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGG > SRR4302533.1056819/1‑94 (MQ=60)
ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGG < SRR4302533.363332/94‑1 (MQ=60)
ATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGG > SRR4302533.3933636/1‑94 (MQ=60)
TGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCTAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGT < SRR4302533.1691997/94‑1 (MQ=60)
AGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGT < SRR4302533.5063317/94‑1 (MQ=60)
CCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGT > SRR4302533.4585032/1‑94 (MQ=60)
CTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTC > SRR4302533.3472886/1‑94 (MQ=60)
TAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCT > SRR4302533.2570534/1‑94 (MQ=60)
AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT < SRR4302533.5437927/94‑1 (MQ=60)
AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT < SRR4302533.1471591/94‑1 (MQ=60)
AGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCT > SRR4302533.5645772/1‑94 (MQ=60)
GTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTG < SRR4302533.3819648/94‑1 (MQ=60)
TTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGC > SRR4302533.2505853/1‑94 (MQ=60)
ACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCA > SRR4302533.5827096/1‑94 (MQ=60)
ACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACG > SRR4302533.1893638/1‑94 (MQ=60)
ACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACG > SRR4302533.5894270/1‑94 (MQ=60)
CGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGA > SRR4302533.1238629/1‑94 (MQ=60)
GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT < SRR4302533.2092596/94‑1 (MQ=60)
GTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAAT > SRR4302533.1540440/1‑94 (MQ=60)
TAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATC < SRR4302533.5446256/94‑1 (MQ=60)
TAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATC > SRR4302533.6121732/1‑94 (MQ=60)
AACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCG > SRR4302533.141636/1‑94 (MQ=60)
CACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACAC > SRR4302533.4345594/1‑94 (MQ=60)
CCCTGATGAGTACCCAAAACTGACCATTAAGCCGCCGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC < SRR4302533.5342997/94‑1 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.4574514/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.3472100/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.3296826/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.753988/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.2429818/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACC > SRR4302533.2235658/1‑94 (MQ=60)
ACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGATGTCTCTGCCCACGGAATCGTACACC > SRR4302533.5194138/1‑94 (MQ=60)
CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA > SRR4302533.1667627/1‑94 (MQ=60)
CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA > SRR4302533.1614340/1‑94 (MQ=60)
CCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCA > SRR4302533.3567298/1‑94 (MQ=60)
CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC > SRR4302533.3134880/1‑94 (MQ=60)
CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC > SRR4302533.3870512/1‑94 (MQ=60)
CTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCAC > SRR4302533.3727892/1‑94 (MQ=60)
TGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTATACCACG > SRR4302533.884471/1‑94 (MQ=60)
TGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACG > SRR4302533.3722501/1‑94 (MQ=60)
TATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGC < SRR4302533.1480709/94‑1 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG > SRR4302533.3464371/1‑94 (MQ=60)
ATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCG > SRR4302533.1822315/1‑94 (MQ=60)
TGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGC > SRR4302533.510187/1‑94 (MQ=60)
AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAC > SRR4302533.958762/1‑94 (MQ=60)
AGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCAC > SRR4302533.2709255/1‑94 (MQ=60)
GCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTC > SRR4302533.1332453/1‑94 (MQ=60)
CCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCT < SRR4302533.1391458/94‑1 (MQ=60)
CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT < SRR4302533.5896154/94‑1 (MQ=60)
CAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTT > SRR4302533.2011485/1‑94 (MQ=60)
AAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTA > SRR4302533.6180647/1‑94 (MQ=60)
AAAACTGACCATTAAGCCGCGGAGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTA > SRR4302533.2172032/1‑94 (MQ=60)
AAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTAC < SRR4302533.2712267/94‑1 (MQ=60)
AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC < SRR4302533.1010939/94‑1 (MQ=60)
AACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACC > SRR4302533.1404044/1‑94 (MQ=60)
ACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCG < SRR4302533.2786383/94‑1 (MQ=60)
TGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCC > SRR4302533.3605570/1‑94 (MQ=60)
GACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACAACGCGCACTTTCTTACCGCCG > SRR4302533.2078956/1‑94 (MQ=60)
GACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCACACGGAATCGTACACCACGCGCACTTTCTTACCGCCG > SRR4302533.336919/1‑94 (MQ=60)
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGT > SRR4302533.5258628/1‑94 (MQ=60)
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGT > SRR4302533.108434/1‑94 (MQ=60)
CCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGGGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGG > SRR4302533.6038513/1‑94 (MQ=60)
CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTAGACCACGCGCACTTTCTTACCGCCGGTG > SRR4302533.3089485/1‑94 (MQ=60)
CATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTG < SRR4302533.2582578/94‑1 (MQ=60)
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT > SRR4302533.5594384/1‑94 (MQ=60)
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT < SRR4302533.3111159/94‑1 (MQ=60)
TTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGAT < SRR4302533.1589754/94‑1 (MQ=60)
AGCCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTC > SRR4302533.5167781/1‑94 (MQ=60)
CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTT < SRR4302533.4721070/94‑1 (MQ=60)
CCGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTT < SRR4302533.2797806/94‑1 (MQ=60)
CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT < SRR4302533.5126518/94‑1 (MQ=60)
CGCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTT < SRR4302533.781040/94‑1 (MQ=60)
GCGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTT < SRR4302533.780327/94‑1 (MQ=60)
CGGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTA < SRR4302533.4368487/94‑1 (MQ=60)
GGCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAA > SRR4302533.5332771/1‑94 (MQ=60)
GCGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAAC > SRR4302533.1865427/1‑94 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC < SRR4302533.6007758/94‑1 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC > SRR4302533.52629/1‑94 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC > SRR4302533.5601751/1‑94 (MQ=60)
CGTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACC < SRR4302533.2460413/94‑1 (MQ=60)
GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG < SRR4302533.3015938/94‑1 (MQ=60)
GTTGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCG > SRR4302533.667948/1‑94 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCT < SRR4302533.305687/94‑1 (MQ=60)
TGCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCC > SRR4302533.6084097/1‑94 (MQ=60)
GCAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTC < SRR4302533.3263660/94‑1 (MQ=60)
CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCG < SRR4302533.5128712/94‑1 (MQ=60)
CAGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCG < SRR4302533.900542/94‑1 (MQ=60)
AGGCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGA > SRR4302533.6077383/1‑94 (MQ=60)
GGCAACCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGAC < SRR4302533.5214119/94‑1 (MQ=60)
GCAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACC < SRR4302533.1925995/94‑1 (MQ=60)
CAATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCA > SRR4302533.2044354/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG > SRR4302533.1607575/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG > SRR4302533.3600358/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG > SRR4302533.199922/1‑94 (MQ=60)
AATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAG < SRR4302533.4144008/94‑1 (MQ=60)
ATCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGA < SRR4302533.5316318/94‑1 (MQ=60)
TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT > SRR4302533.491491/1‑94 (MQ=60)
TCCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGAT < SRR4302533.311827/94‑1 (MQ=60)
CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTGCCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC < SRR4302533.1058933/94‑1 (MQ=60)
CCAGCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATC < SRR4302533.1384441/94‑1 (MQ=60)
GCGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTC < SRR4302533.667395/94‑1 (MQ=60)
CGACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCT > SRR4302533.1931699/1‑94 (MQ=60)
GACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTT < SRR4302533.4976375/94‑1 (MQ=60)
ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTC < SRR4302533.1341517/94‑1 (MQ=60)
ACCGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTC > SRR4302533.3070624/1‑94 (MQ=60)
CGTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCAC < SRR4302533.98913/94‑1 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG < SRR4302533.6109861/94‑1 (MQ=60)
GTCCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACG > SRR4302533.1746179/1‑94 (MQ=60)
CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > SRR4302533.3113394/1‑94 (MQ=60)
CCCCAGGTGTCTCTGCCCACGGAATCGTACACCACACGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > SRR4302533.3051278/1‑94 (MQ=60)
|
TTGAGAATGCCTAAGTTCACACCGGTAACCGCACCTGATGAGTTGCCAAAACTGACCATTAAGCCGCGGCGTTGCAGGCAATCCAGCGACCGTTCCCAGGTGTCTCTGCCCACGGAATCGTACACCACGCGCACTTTCTTACCGCCGGTGATCTCTTTTAACCGCTCGACCAGATCCTCTTCACGAT > NC_000913/4261050‑4261236
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
