Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,282,688	T→C	A35A (GCA→GCG)	yjcH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,282,688	0	T	C	93.3%	1195.9 / 53.4	430	A35A (GCA→GCG)	yjcH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (16/13); new base C (212/189); total (228/202)
Fisher's exact test for biased strand distribution p-value = 8.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 443 total aligned reads displayed.

AATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAAAT  >  NC_000913/4282598‑4282780

aaTACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGCAGGCGATCAGTAAAATCACACCGATATAAACCGc                                                                                            >  1:7771973/1‑93 (MQ=255)

aaTACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGc                                                                                            <  1:9940513/93‑1 (MQ=255)

  tACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCa                                                                                          >  2:6137581/1‑93 (MQ=255)

  tACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCa                                                                                          <  1:6076706/93‑1 (MQ=255)

  tACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCa                                                                                          >  1:8415761/1‑93 (MQ=255)

  tACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCa                                                                                          >  1:9813167/1‑93 (MQ=255)

     cgcgTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCa                                                                                       <  2:5903168/93‑1 (MQ=255)

        gtgtGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCataa                                                                                    >  2:7621212/1‑93 (MQ=255)

          gtgACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCataata                                                                                  <  1:8700209/93‑1 (MQ=255)

           tgACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCAtaataa                                                                                 <  1:3766149/93‑1 (MQ=255)

            gACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATaataat                                                                                <  2:708293/93‑1 (MQ=255)

             aCGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATc                                                                               <  1:4570619/93‑1 (MQ=255)

             aCGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATc                                                                               <  1:4738693/93‑1 (MQ=255)

             aCGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCACCATAATAATc                                                                               >  1:1913727/1‑93 (MQ=255)

              cGCTTGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCg                                                                              <  1:2429363/93‑1 (MQ=255)

               gCTGGCGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGa                                                                             <  2:2248026/93‑1 (MQ=255)

                cTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGAc                                                                            >  2:3579861/1‑93 (MQ=255)

                cTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGAc                                                                            <  2:598880/93‑1 (MQ=255)

                 tGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACa                                                                           <  1:352992/93‑1 (MQ=255)

                  ggTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAg                                                                          <  2:7914638/93‑1 (MQ=255)

                   gtgtTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAgg                                                                         >  1:10008839/1‑93 (MQ=255)

                    tgtTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGCCAGGa                                                                        >  2:2023646/1‑93 (MQ=255)

                    tgtTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAggg                                                                        >  1:7444657/1‑92 (MQ=255)

                      ttCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAtg                                                                      >  1:6435910/1‑93 (MQ=255)

                       tCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAtgg                                                                     <  2:6921560/93‑1 (MQ=255)

                        cGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAtggt                                                                    <  2:6994323/93‑1 (MQ=255)

                         ggATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGAtggtg                                                                   >  1:4150499/1‑93 (MQ=255)

                         ggATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAtggtg                                                                   <  1:15263/93‑1 (MQ=255)

                          gATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGAtggtgg                                                                  >  1:7945874/1‑93 (MQ=255)

                          gATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAtggtgg                                                                  >  1:6298008/1‑93 (MQ=255)

                           aTTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGc                                                                 <  2:2758692/93‑1 (MQ=255)

                            ttCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCa                                                                <  1:2332915/93‑1 (MQ=255)

                            ttCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCa                                                                <  1:8779151/93‑1 (MQ=255)

                             tCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCaa                                                               >  1:8117335/1‑93 (MQ=255)

                             tCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCaa                                                               >  2:8180385/1‑93 (MQ=255)

                              cAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCaaa                                                              >  2:2462706/1‑93 (MQ=255)

                                gcggcgTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCCGCATAATAATCGACAGGATGGTGGCAAAcc                                                            >  1:4993781/1‑93 (MQ=255)

                                   gcgTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGtt                                                         <  1:9357111/93‑1 (MQ=255)

                                      tGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGcc                                                      >  2:9342361/1‑93 (MQ=255)

                                       gCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGCGGCAAACCGTTGCCg                                                     >  1:2765887/1‑93 (MQ=255)

                                        cccAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGt                                                    <  1:4309041/93‑1 (MQ=255)

                                         ccagccagCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGtt                                                   >  1:387298/1‑93 (MQ=255)

                                           agccagccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGtttt                                                 >  1:5539328/1‑93 (MQ=255)

                                            gccagccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGttttt                                                <  2:4622764/93‑1 (MQ=255)

                                              cagccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCg                                              >  1:5154713/1‑93 (MQ=255)

                                              cagccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCg                                              >  1:283940/1‑93 (MQ=255)

                                               agccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGa                                             <  2:7257632/93‑1 (MQ=255)

                                                gccGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGAc                                            <  2:2884959/93‑1 (MQ=255)

                                                   gggCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTaa                                         <  1:6176520/93‑1 (MQ=255)

                                                    ggCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAAc                                        <  2:98658/93‑1 (MQ=255)

                                                    ggCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAAc                                        <  2:3358533/93‑1 (MQ=255)

                                                    ggCGCGAAGGCGAGCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAAc                                        <  1:2636133/93‑1 (MQ=255)

                                                      cgcgAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTc                                      <  1:2057910/93‑1 (MQ=255)

                                                       gcgAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTcc                                     >  2:6548934/1‑93 (MQ=255)

                                                       gcgAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTcc                                     >  1:7227793/1‑93 (MQ=255)

                                                        cgAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTccc                                    <  1:2904549/93‑1 (MQ=255)

                                                         gAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCt                                   >  1:2127840/1‑93 (MQ=255)

                                                         gAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCt                                   >  2:3242411/1‑93 (MQ=255)

                                                         gAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCt                                   >  1:3085688/1‑93 (MQ=255)

                                                         gAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGGTTTTCGACTAACTCCCt                                   >  1:6549551/1‑93 (MQ=255)

                                                         gAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATCGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCt                                   >  2:1844441/1‑93 (MQ=255)

                                                          aaGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGTCTAACTCCCTg                                  >  2:1666515/1‑93 (MQ=255)

                                                          aaGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTg                                  >  1:342885/1‑93 (MQ=255)

                                                          aaGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTg                                  >  2:8929016/1‑93 (MQ=255)

                                                          aaGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTg                                  >  2:4932046/1‑93 (MQ=255)

                                                           aGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGa                                 >  2:1084469/1‑93 (MQ=255)

                                                             gCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGaaa                               <  2:1941468/93‑1 (MQ=255)

                                                             gCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGaaa                               <  1:7022402/93‑1 (MQ=255)

                                                             gCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGaaa                               <  1:322274/93‑1 (MQ=255)

                                                              cGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTCACTCCCTGCAAt                              >  2:3936304/1‑93 (MQ=255)

                                                               gATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATg                             <  2:930231/93‑1 (MQ=255)

                                                               gATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATg                             >  2:5696563/1‑93 (MQ=255)

                                                               gATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATg                             >  1:68847/1‑93 (MQ=255)

                                                               gATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATg                             <  1:5858141/93‑1 (MQ=255)

                                                               gATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATg                             >  2:9157794/1‑93 (MQ=255)

                                                                aTCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATgc                            >  2:9645210/1‑93 (MQ=255)

                                                                aTCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATgc                            <  1:5697422/93‑1 (MQ=255)

                                                                 tCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATgcg                           >  2:3051442/1‑93 (MQ=255)

                                                                   aGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCa                         <  2:3859718/93‑1 (MQ=255)

                                                                   aGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCa                         <  1:8590398/93‑1 (MQ=255)

                                                                    gTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCAt                        >  2:1235318/1‑93 (MQ=255)

                                                                     tAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCAtt                       <  2:4399362/93‑1 (MQ=255)

                                                                      aaaaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTg                      >  2:7805066/1‑93 (MQ=255)

                                                                      aaaaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTg                      <  1:1092497/93‑1 (MQ=255)

                                                                      aaaaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTg                      >  2:1502095/1‑93 (MQ=255)

                                                                        aaTAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtc                    <  2:8845877/93‑1 (MQ=255)

                                                                        aaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtc                    <  2:64093/93‑1 (MQ=255)

                                                                        aaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtc                    >  2:5183018/1‑93 (MQ=255)

                                                                        aaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtc                    <  1:9461019/93‑1 (MQ=255)

                                                                        aaTAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtc                    >  1:4544301/1‑93 (MQ=255)

                                                                           aaaGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGtcttc                 <  2:6694623/93‑1 (MQ=255)

                                                                             aGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGGCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTa               <  2:4273320/93‑1 (MQ=255)

                                                                                cGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATcc            <  2:8406977/93‑1 (MQ=255)

                                                                                cGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATcc            >  2:8614355/1‑93 (MQ=255)

                                                                                 gATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCg           >  2:4183377/1‑93 (MQ=255)

                                                                                  atatAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGc          <  1:1181483/93‑1 (MQ=255)

                                                                                   tataAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCt         >  1:1757522/1‑93 (MQ=255)

                                                                                    atgaaCCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTg        <  1:1631053/90‑1 (MQ=255)

                                                                                    ataAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTAGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTg        >  1:4056226/1‑93 (MQ=255)

                                                                                     taAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGCAATGCGCATTGTCTTCTATCCGCTGa       >  1:5368843/1‑93 (MQ=255)

AATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAAAT  >  NC_000913/4282598‑4282780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 243 total aligned reads displayed.

TGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAAATA  >  NC_000913/4282595‑4282781

TGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACC                                                                                               <  SRR4302540.3449381/94‑1 (MQ=60)

TGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACC                                                                                               <  SRR4302540.1344819/94‑1 (MQ=60)

 GGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCG                                                                                              >  SRR4302540.6148605/1‑94 (MQ=60)

  GAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGCAGGCGATCAGTAAAATCACACCGATATAAACCGC                                                                                             >  SRR4302540.7862833/1‑94 (MQ=60)

  GAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGCAGGCGATCAGTAAAATAAAGGCGATATAAACAGC                                                                                             >  SRR4302540.1889014/1‑94 (MQ=60)

  GAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGC                                                                                             <  SRR4302540.2267115/94‑1 (MQ=60)

  GAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGC                                                                                             <  SRR4302540.8150845/94‑1 (MQ=60)

   AATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCC                                                                                            <  SRR4302540.10056616/94‑1 (MQ=60)

   AATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCC                                                                                            <  SRR4302540.3263306/94‑1 (MQ=60)

   AATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCC                                                                                            <  SRR4302540.601099/94‑1 (MQ=60)

    ATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCA                                                                                           >  SRR4302540.2905411/1‑94 (MQ=60)

    ATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCA                                                                                           >  SRR4302540.2219622/1‑94 (MQ=60)

    ATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCA                                                                                           >  SRR4302540.9928009/1‑94 (MQ=60)

     TACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAG                                                                                          <  SRR4302540.2229132/94‑1 (MQ=60)

     TACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAG                                                                                          <  SRR4302540.6144278/94‑1 (MQ=60)

      ACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGC                                                                                         <  SRR4302540.5429297/94‑1 (MQ=60)

      ACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGC                                                                                         >  SRR4302540.2963000/1‑94 (MQ=60)

      ACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGC                                                                                         <  SRR4302540.5429001/94‑1 (MQ=60)

       CCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCA                                                                                        <  SRR4302540.863646/94‑1 (MQ=60)

         GCGTGTGCCGCTGGTGTGCGGATTCAGCGGCGTGCGCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATA                                                                                      <  SRR4302540.4359598/94‑1 (MQ=60)

          CGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAA                                                                                     <  SRR4302540.7658993/94‑1 (MQ=60)

          CGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAA                                                                                     >  SRR4302540.4295047/1‑94 (MQ=60)

           GTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAAT                                                                                    <  SRR4302540.8197837/94‑1 (MQ=60)

           GTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAAT                                                                                    >  SRR4302540.8495983/1‑94 (MQ=60)

           GTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAAT                                                                                    >  SRR4302540.6213380/1‑94 (MQ=60)

           GTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAAT                                                                                    >  SRR4302540.4853698/1‑94 (MQ=60)

           GTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAAT                                                                                    >  SRR4302540.4287833/1‑94 (MQ=60)

            TGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATA                                                                                   >  SRR4302540.3893444/1‑94 (MQ=60)

            GGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATA                                                                                   <  SRR4302540.792481/94‑1 (MQ=60)

             GTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAA                                                                                  <  SRR4302540.8622/94‑1 (MQ=60)

             GTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAA                                                                                  <  SRR4302540.8801200/94‑1 (MQ=60)

             GTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAA                                                                                  >  SRR4302540.5360456/1‑94 (MQ=60)

              TGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAAT                                                                                 <  SRR4302540.3807238/94‑1 (MQ=60)

              TGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAAT                                                                                 <  SRR4302540.7867255/94‑1 (MQ=60)

              GGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAAT                                                                                 <  SRR4302540.3691628/94‑1 (MQ=60)

               GACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATC                                                                                <  SRR4302540.9741895/94‑1 (MQ=60)

               GACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATC                                                                                >  SRR4302540.7014363/1‑94 (MQ=60)

               GACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCACCATAATAATC                                                                                >  SRR4302540.1934623/1‑94 (MQ=60)

                GCGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCG                                                                               <  SRR4302540.10041835/94‑1 (MQ=60)

                ACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCG                                                                               <  SRR4302540.1179376/94‑1 (MQ=60)

                ACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCG                                                                               <  SRR4302540.4619952/94‑1 (MQ=60)

                 CGCTTGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGA                                                                              <  SRR4302540.2455533/94‑1 (MQ=60)

                  GCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGAC                                                                             >  SRR4302540.1079264/1‑94 (MQ=60)

                   CTGATGTTCGTATTCAGCGTCGTGCCCAGCCAGCCGGGCGCGAAGTCTATCAGTAAAATAAAGCCGATATAAGCCGCCAGCATAATAATCGACA                                                                            <  SRR4302540.567254/94‑1 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAG                                                                           >  SRR4302540.6976136/1‑94 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           <  SRR4302540.356611/94‑1 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           <  SRR4302540.3762797/94‑1 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           >  SRR4302540.2876879/1‑94 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           >  SRR4302540.9107113/1‑94 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           >  SRR4302540.7288856/1‑94 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAG                                                                           >  SRR4302540.2416326/1‑94 (MQ=60)

                    TGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATAGACAG                                                                           >  SRR4302540.2416334/1‑94 (MQ=60)

                     GGTGTTCGGATTCAGCGGCGTGCCCCGCCAGCCGGGCGCGAAGGCGATCAGCAAAATAAAGCCGATATAAACCGCAAGCATAATAATAGACAGG                                                                          >  SRR4302540.110001/1‑94 (MQ=60)

                     GGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGG                                                                          <  SRR4302540.9510090/94‑1 (MQ=60)

                     GGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGG                                                                          >  SRR4302540.10125392/1‑94 (MQ=60)

                      GTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGG                                                                         >  SRR4302540.7527602/1‑94 (MQ=60)

                       TGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAT                                                                        <  SRR4302540.5722854/94‑1 (MQ=60)

                       TGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGAT                                                                        >  SRR4302540.8008268/1‑94 (MQ=60)

                        GTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATG                                                                       >  SRR4302540.6121171/1‑94 (MQ=60)

                        GTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATG                                                                       <  SRR4302540.6961488/94‑1 (MQ=60)

                        GTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATG                                                                       >  SRR4302540.6507545/1‑94 (MQ=60)

                          TCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGT                                                                     <  SRR4302540.4497376/94‑1 (MQ=60)

                           CGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTG                                                                    >  SRR4302540.4195445/1‑94 (MQ=60)

                           CGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTG                                                                    <  SRR4302540.1844005/94‑1 (MQ=60)

                           CGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTG                                                                    <  SRR4302540.6651973/94‑1 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGG                                                                   >  SRR4302540.8038489/1‑94 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGG                                                                   <  SRR4302540.4405687/94‑1 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGG                                                                   >  SRR4302540.6368145/1‑94 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGG                                                                   <  SRR4302540.15435/94‑1 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGG                                                                   <  SRR4302540.3372772/94‑1 (MQ=60)

                            GGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGG                                                                   >  SRR4302540.6368144/1‑94 (MQ=60)

                             GATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGC                                                                  <  SRR4302540.8736726/94‑1 (MQ=60)

                              ATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCA                                                                 <  SRR4302540.7357002/94‑1 (MQ=60)

                               TTCAGCGGCGTGCCCAGCCAGCCGGGGTGGAAGTCGATCCGTGAAAGAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAA                                                                <  SRR4302540.2358053/94‑1 (MQ=60)

                               TTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAA                                                                <  SRR4302540.2358052/94‑1 (MQ=60)

                               TTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAA                                                                <  SRR4302540.8880808/94‑1 (MQ=60)

                               TTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAA                                                                >  SRR4302540.8211533/1‑94 (MQ=60)

                               TTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAA                                                                <  SRR4302540.8349993/94‑1 (MQ=60)

                                TCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAA                                                               <  SRR4302540.10143836/94‑1 (MQ=60)

                                  AGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCCGCATAATAATCGACAGGATGGTGGCAAACC                                                             >  SRR4302540.5047840/1‑94 (MQ=60)

                                  AGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACC                                                             <  SRR4302540.5797476/94‑1 (MQ=60)

                                  AGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACC                                                             <  SRR4302540.2772215/94‑1 (MQ=60)

                                   GCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCG                                                            <  SRR4302540.1719601/94‑1 (MQ=60)

                                   GCGGCGGGCCGAGCCGGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCG                                                            <  SRR4302540.3800777/94‑1 (MQ=60)

                                     GGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTT                                                          >  SRR4302540.1540224/1‑94 (MQ=60)

                                     GGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTT                                                          <  SRR4302540.3234405/94‑1 (MQ=60)

                                      GCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTG                                                         <  SRR4302540.9468552/94‑1 (MQ=60)

                                        GTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCC                                                       >  SRR4302540.948309/1‑94 (MQ=60)

                                        GTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCC                                                       <  SRR4302540.6361394/94‑1 (MQ=60)

                                         TGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCG                                                      <  SRR4302540.7344623/94‑1 (MQ=60)

                                         TGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGCGGCAAACCGTTGCCG                                                      >  SRR4302540.2795772/1‑94 (MQ=60)

                                          GCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGT                                                     <  SRR4302540.1766966/94‑1 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    <  SRR4302540.4009293/94‑1 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    >  SRR4302540.1822742/1‑94 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    >  SRR4302540.1266299/1‑94 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    <  SRR4302540.2908212/94‑1 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    <  SRR4302540.4355946/94‑1 (MQ=60)

                                           CCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTT                                                    <  SRR4302540.394312/94‑1 (MQ=60)

                                            CCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTT                                                   <  SRR4302540.5337644/94‑1 (MQ=60)

                                             CAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTT                                                  >  SRR4302540.8834889/1‑94 (MQ=60)

                                             CAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTT                                                  >  SRR4302540.5600342/1‑94 (MQ=60)

                                              AGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTT                                                 >  SRR4302540.3178039/1‑94 (MQ=60)

                                              AGCCAGCCGGGCGCGAAGGCGATAAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTT                                                 <  SRR4302540.2126659/94‑1 (MQ=60)

                                               GCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTC                                                <  SRR4302540.4656788/94‑1 (MQ=60)

                                               GCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTC                                                <  SRR4302540.8693575/94‑1 (MQ=60)

                                               GCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTC                                                >  SRR4302540.8350335/1‑94 (MQ=60)

                                                CCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCG                                               >  SRR4302540.286736/1‑94 (MQ=60)

                                                CCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCG                                               >  SRR4302540.5210658/1‑94 (MQ=60)

                                                CCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCG                                               >  SRR4302540.201683/1‑94 (MQ=60)

                                                  AGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGAC                                             >  SRR4302540.7658941/1‑94 (MQ=60)

                                                  AGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGAC                                             >  SRR4302540.2026874/1‑94 (MQ=60)

                                                   GCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACT                                            <  SRR4302540.2502509/94‑1 (MQ=60)

                                                    CCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTA                                           >  SRR4302540.272611/1‑94 (MQ=60)

                                                    CCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTA                                           >  SRR4302540.124341/1‑94 (MQ=60)

                                                     CGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAA                                          <  SRR4302540.1574046/94‑1 (MQ=60)

                                                     CGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAA                                          >  SRR4302540.1624031/1‑94 (MQ=60)

                                                     CGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGAAAACCGTTGCCGTTTTTCGACTAA                                          >  SRR4302540.2817835/1‑94 (MQ=60)

                                                      GGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAAC                                         <  SRR4302540.6245334/94‑1 (MQ=60)

                                                       GGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACT                                        <  SRR4302540.2664674/94‑1 (MQ=60)

                                                        GCTCGAAGGCAATCAGTAAAATAAAGCGGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTC                                       <  SRR4302540.1134991/94‑1 (MQ=60)

                                                        GCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTC                                       >  SRR4302540.1763589/1‑94 (MQ=60)

                                                         CGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCC                                      <  SRR4302540.2080060/94‑1 (MQ=60)

                                                         CGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCC                                      >  SRR4302540.7308390/1‑94 (MQ=60)

                                                          GCGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCC                                     >  SRR4302540.3913047/1‑94 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    >  SRR4302540.2150666/1‑94 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    >  SRR4302540.2150670/1‑94 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    <  SRR4302540.2936256/94‑1 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    <  SRR4302540.6276565/94‑1 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    >  SRR4302540.5818728/1‑94 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    <  SRR4302540.1706731/94‑1 (MQ=60)

                                                           CGAAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCT                                    >  SRR4302540.3119543/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAACACGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.3205631/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.8814484/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.8136465/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.6647421/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.4170528/1‑94 (MQ=60)

                                                             AAGGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGA                                  >  SRR4302540.8137064/1‑94 (MQ=60)

                                                               GGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAA                                <  SRR4302540.6068657/94‑1 (MQ=60)

                                                               GGCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAA                                <  SRR4302540.4779453/94‑1 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               <  SRR4302540.7100406/94‑1 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               <  SRR4302540.8684520/94‑1 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               >  SRR4302540.5714548/1‑94 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               <  SRR4302540.6279371/94‑1 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               <  SRR4302540.325494/94‑1 (MQ=60)

                                                                GCGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAAT                               >  SRR4302540.3482058/1‑94 (MQ=60)

                                                                 CGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATG                              >  SRR4302540.69543/1‑94 (MQ=60)

                                                                 CGATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATG                              >  SRR4302540.4594006/1‑94 (MQ=60)

                                                                  GATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGC                             >  SRR4302540.6476082/1‑94 (MQ=60)

                                                                  GATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGC                             <  SRR4302540.5922931/94‑1 (MQ=60)

                                                                   ATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCG                            >  SRR4302540.6167211/1‑94 (MQ=60)

                                                                   ATCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCG                            <  SRR4302540.5760151/94‑1 (MQ=60)

                                                                    TCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGC                           >  SRR4302540.10029213/1‑94 (MQ=60)

                                                                    TCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGC                           >  SRR4302540.2482680/1‑94 (MQ=60)

                                                                    TCAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACCCCCTGAAATGCGC                           >  SRR4302540.2441520/1‑94 (MQ=60)

                                                                     CAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCA                          >  SRR4302540.9151759/1‑94 (MQ=60)

                                                                     CAGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCA                          >  SRR4302540.4950226/1‑94 (MQ=60)

                                                                      AGTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCAT                         <  SRR4302540.8690262/94‑1 (MQ=60)

                                                                       GTAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATT                        >  SRR4302540.7527768/1‑94 (MQ=60)

                                                                        TAAAATAAATCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTG                       <  SRR4302540.3901388/94‑1 (MQ=60)

                                                                        TAAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTG                       >  SRR4302540.2820542/1‑94 (MQ=60)

                                                                         AAAATAAAGCCGATATAACCCGCCAGCATAATAATCGACAGGATGGTGGCAAGCCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGT                      <  SRR4302540.6578480/94‑1 (MQ=60)

                                                                         AAAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGT                      <  SRR4302540.1103713/94‑1 (MQ=60)

                                                                          AAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTC                     <  SRR4302540.418902/94‑1 (MQ=60)

                                                                          AAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGGCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTT                     >  SRR4302540.5059266/1‑94 (MQ=60)

                                                                          AAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTT                     >  SRR4302540.5059267/1‑94 (MQ=60)

                                                                          AAATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTC                     >  SRR4302540.4593476/1‑94 (MQ=60)

                                                                           AATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAAATCCCTGAAATGCGGATTGTCT                    >  SRR4302540.9430945/1‑94 (MQ=60)

                                                                           AATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCT                    <  SRR4302540.3419039/94‑1 (MQ=60)

                                                                           AATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCT                    <  SRR4302540.275127/94‑1 (MQ=60)

                                                                           AATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCT                    <  SRR4302540.9573276/94‑1 (MQ=60)

                                                                           AATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGATTTTCGACTAACTCCCTAAAATGCACATTGTCT                    >  SRR4302540.5181551/1‑94 (MQ=60)

                                                                            ATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTT                   >  SRR4302540.2937528/1‑94 (MQ=60)

                                                                            ATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTT                   <  SRR4302540.7153176/94‑1 (MQ=60)

                                                                            ATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTT                   >  SRR4302540.4962973/1‑94 (MQ=60)

                                                                            ATAAAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTT                   >  SRR4302540.2074591/1‑94 (MQ=60)

                                                                               AAGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTA                >  SRR4302540.3473823/1‑94 (MQ=60)

                                                                                AGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT               >  SRR4302540.4186962/1‑94 (MQ=60)

                                                                                AGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT               <  SRR4302540.7276566/94‑1 (MQ=60)

                                                                                AGCCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT               <  SRR4302540.5821963/94‑1 (MQ=60)

                                                                                AGCCGACAGAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTAT               <  SRR4302540.9654235/94‑1 (MQ=60)

                                                                                 ACCGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATC              <  SRR4302540.6575791/94‑1 (MQ=60)

                                                                                   CGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCG            <  SRR4302540.9526364/94‑1 (MQ=60)

                                                                                   CGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCG            >  SRR4302540.4731186/1‑94 (MQ=60)

                                                                                   CGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCG            >  SRR4302540.8773366/1‑94 (MQ=60)

                                                                                   CGATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCG            >  SRR4302540.5577873/1‑94 (MQ=60)

                                                                                    GATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGC           >  SRR4302540.6229265/1‑94 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          <  SRR4302540.4726502/94‑1 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          <  SRR4302540.2589611/94‑1 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          <  SRR4302540.3505965/94‑1 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          <  SRR4302540.1193683/94‑1 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          <  SRR4302540.8446877/94‑1 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          >  SRR4302540.991771/1‑94 (MQ=60)

                                                                                     ATATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCT          >  SRR4302540.4015238/1‑94 (MQ=60)

                                                                                      TATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTAGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTG         >  SRR4302540.4099957/1‑94 (MQ=60)

                                                                                       ATGAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGA        <  SRR4302540.1648904/94‑1 (MQ=60)

                                                                                       ATAAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGCAATGCGCATTGTCTTCTATCCGCTGA        >  SRR4302540.5427845/1‑94 (MQ=60)

                                                                                         AAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATA      >  SRR4302540.4610622/1‑94 (MQ=60)

                                                                                         AAACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATA      >  SRR4302540.6614521/1‑94 (MQ=60)

                                                                                          AACCGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAA     <  SRR4302540.6911159/94‑1 (MQ=60)

                                                                                             CGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAAATA  >  SRR4302540.1646439/1‑94 (MQ=60)

TGGAATACCGCGTGTGACGCTGGTGTTCGGATTCAGCGGCGTGCCCAGCCAGCCGGGCGCGAAGGCGATCAGTAAAATAAAGCCGATATAAACTGCCAGCATAATAATCGACAGGATGGTGGCAAACCGTTGCCGTTTTTCGACTAACTCCCTGAAATGCGCATTGTCTTCTATCCGCTGATAAATA  >  NC_000913/4282595‑4282781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`