Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,307,603 T→C E319E (GAA→GAG)  yjcW ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,307,6030TC99.6% 1397.5 / ‑5.1 441E319E (GAA→GAG) yjcWputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (217/222);  total (219/222)
Fisher's exact test for biased strand distribution p-value = 2.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 472 total aligned reads displayed.

TTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC  >  NC_000913/4307511‑4307692
                                                                                            |                                                                                         
   tCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATctct                                                                                        >  2:4091877/1‑93 (MQ=255)
   tCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATctct                                                                                        >  1:6319335/1‑93 (MQ=255)
     ccGGGGGCTTTTCATGATGTTAACCATCCCTTTTTTCAAGGGATCCAGGGGTGAACGTGGAGAGATATTTTTGCCATTAAGACGGATCTCTcc                                                                                      <  1:7950913/93‑1 (MQ=255)
     ccGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGTCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTcc                                                                                      <  2:1756921/93‑1 (MQ=255)
     ccGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTcc                                                                                      >  2:2786341/1‑93 (MQ=255)
     ccGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTcc                                                                                      <  2:743779/93‑1 (MQ=255)
              ttCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGcgcg                                                                             >  1:6831522/1‑93 (MQ=255)
               tCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATTTTTGACATTAAGACGGATCTCTCTGCCAGCGCGt                                                                            >  1:2592902/1‑93 (MQ=255)
               tCAGTGATGTAAGCCATCCCTTTGTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGt                                                                            <  2:9356804/93‑1 (MQ=255)
                cAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGtt                                                                           <  1:5191619/93‑1 (MQ=255)
                  gTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTa                                                                         >  2:8429609/1‑93 (MQ=255)
                  gTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTa                                                                         >  1:6001668/1‑93 (MQ=255)
                   tGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTAt                                                                        <  2:8669522/93‑1 (MQ=255)
                    gATGTAAGCCATCCCTTTTTTCAGGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATc                                                                       <  2:5524214/93‑1 (MQ=255)
                      tGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCa                                                                     <  1:7212078/93‑1 (MQ=255)
                        tAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACg                                                                   <  2:7885145/93‑1 (MQ=255)
                        tAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACg                                                                   >  1:5717980/1‑93 (MQ=255)
                            ccATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCaa                                                               <  1:9569500/93‑1 (MQ=255)
                              aTCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAAc                                                             >  2:3544255/1‑93 (MQ=255)
                               tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCaaa                                                              <  1:4126056/91‑1 (MQ=255)
                               tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACa                                                            >  2:6774409/1‑93 (MQ=255)
                                cccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAg                                                           <  1:2826587/93‑1 (MQ=255)
                                cccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAg                                                           <  1:7783938/93‑1 (MQ=255)
                                 ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          >  2:2215404/1‑93 (MQ=255)
                                  cTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGAc                                                         >  2:166076/1‑93 (MQ=255)
                                  cTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGAc                                                         <  2:3812096/93‑1 (MQ=255)
                                   ttttttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACa                                                        <  2:3270094/93‑1 (MQ=255)
                                   ttttttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACa                                                        <  1:5636374/93‑1 (MQ=255)
                                    tttttCAAGGCATCCAGGGGTAAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACaa                                                       <  2:4980772/93‑1 (MQ=255)
                                     ttttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAAt                                                      >  2:8936668/1‑93 (MQ=255)
                                      tttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGAGCGTTTATCCACGCCAAACAGACAAtt                                                     >  2:5037005/1‑93 (MQ=255)
                                         cACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtcat                                                  <  2:972677/93‑1 (MQ=255)
                                          aCGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtcatc                                                 <  2:7338523/93‑1 (MQ=255)
                                           cGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtcatca                                                <  1:1046674/93‑1 (MQ=255)
                                              cATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagtt                                             <  1:9525544/93‑1 (MQ=255)
                                              cATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagtt                                             <  2:9575089/93‑1 (MQ=255)
                                               ctCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttc                                            <  2:8151560/92‑1 (MQ=255)
                                               aTCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttc                                            <  2:4795928/93‑1 (MQ=255)
                                               aTCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCACCGCGTTTATCCACGCCAAACAGACAATTCAtcagttc                                            >  1:6650672/1‑93 (MQ=255)
                                                tCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttca                                           >  1:5436353/1‑93 (MQ=255)
                                                tCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttca                                           >  2:292197/1‑93 (MQ=255)
                                                tCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttca                                           >  2:2147237/1‑93 (MQ=255)
                                                 ccAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcag                                          >  1:8702701/1‑93 (MQ=255)
                                                 ccAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcag                                          <  1:3684601/93‑1 (MQ=255)
                                                   aGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        <  1:1579304/93‑1 (MQ=255)
                                                   aGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        <  2:1526946/93‑1 (MQ=255)
                                                    ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAc                                       <  1:9003653/93‑1 (MQ=255)
                                                     gggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACg                                      >  2:1309399/1‑93 (MQ=255)
                                                       gTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTc                                    <  2:233099/93‑1 (MQ=255)
                                                        tGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTcc                                   <  1:4597734/93‑1 (MQ=255)
                                                         gAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCg                                  <  2:9278122/93‑1 (MQ=255)
                                                         gAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCg                                  <  2:3991732/93‑1 (MQ=255)
                                                           aCGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGa                                >  2:6592584/1‑93 (MQ=255)
                                                            cGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGaa                               <  1:8298604/93‑1 (MQ=255)
                                                              tGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAAcc                             >  1:3060499/1‑93 (MQ=255)
                                                               ggAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCg                            <  1:6136671/93‑1 (MQ=255)
                                                               ggAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCg                            >  2:9017138/1‑93 (MQ=255)
                                                                gagagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGa                           <  2:1054116/93‑1 (MQ=255)
                                                                gagagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGa                           <  2:3103081/93‑1 (MQ=255)
                                                                  gagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGAcc                         >  2:4143542/1‑93 (MQ=255)
                                                                  gagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGAcc                         >  1:7016154/1‑93 (MQ=255)
                                                                   agaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTCTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCa                        <  2:5425643/93‑1 (MQ=255)
                                                                    gaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAg                       <  1:2259743/93‑1 (MQ=255)
                                                                    gaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAg                       >  1:1820069/1‑93 (MQ=255)
                                                                     atatCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGt                      <  2:6089770/93‑1 (MQ=255)
                                                                     atatCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGt                      >  1:5002355/1‑93 (MQ=255)
                                                                      tatCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTc                     >  1:1211031/1‑93 (MQ=255)
                                                                       atCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTcc                    <  2:716729/93‑1 (MQ=255)
                                                                          tttGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTAACCACGCCAAACAGACAATTCATACGTTCAGTCCGTCCGGAGCCGACCAGTCCGGc                 >  1:8158709/1‑93 (MQ=255)
                                                                           ttGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCa                >  2:576545/1‑93 (MQ=255)
                                                                            tGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCaa               <  1:2116342/93‑1 (MQ=255)
                                                                            tGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCaa               <  1:1146982/93‑1 (MQ=255)
                                                                            tGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCaa               <  2:1976792/93‑1 (MQ=255)
                                                                              ccATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAg             <  2:7994838/93‑1 (MQ=255)
                                                                               cATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGc            <  2:4499158/93‑1 (MQ=255)
                                                                               cATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGc            >  1:749836/1‑93 (MQ=255)
                                                                               cATTAAGACAGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGc            >  2:1462848/1‑93 (MQ=255)
                                                                                atgaaGACGCATCTCTCCGCCAGCGCGTTGATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGcc           <  2:7656330/90‑1 (MQ=255)
                                                                                ataaaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGcc           <  2:1214878/90‑1 (MQ=255)
                                                                                aTTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCACAGcc           >  1:1414902/1‑93 (MQ=255)
                                                                                aTTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGcc           >  1:9308027/1‑93 (MQ=255)
                                                                                aTTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGcc           >  1:31618/1‑93 (MQ=255)
                                                                                 ttAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCt          >  2:9219276/1‑93 (MQ=255)
                                                                                 ttAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCt          >  1:9855161/1‑93 (MQ=255)
                                                                                  tAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTa         >  1:1974266/1‑93 (MQ=255)
                                                                                   aaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTaa        <  2:34853/93‑1 (MQ=255)
                                                                                   aaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTaa        >  2:2648683/1‑93 (MQ=255)
                                                                                   aaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTaa        >  1:2436840/1‑93 (MQ=255)
                                                                                   aaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTaa        >  2:6878881/1‑93 (MQ=255)
                                                                                    aGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAat       <  1:3814343/93‑1 (MQ=255)
                                                                                    aGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAat       >  1:3366834/1‑93 (MQ=255)
                                                                                    aGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAat       <  1:4024625/93‑1 (MQ=255)
                                                                                     gACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAata      <  2:4631269/93‑1 (MQ=255)
                                                                                     gACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAata      <  2:6361496/93‑1 (MQ=255)
                                                                                     gACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAata      <  2:1846120/93‑1 (MQ=255)
                                                                                       cGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAtt    <  1:539682/93‑1 (MQ=255)
                                                                                        ggATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAttt   <  1:1367908/93‑1 (MQ=255)
                                                                                        ggATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAttt   >  1:439415/1‑93 (MQ=255)
                                                                                         gATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTtc  <  2:6235943/93‑1 (MQ=255)
                                                                                         gATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTtc  >  1:10031088/1‑93 (MQ=255)
                                                                                            |                                                                                         
TTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC  >  NC_000913/4307511‑4307692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCCC  >  NC_000913/4307510‑4307696
                                                                                             |                                                                                             
GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTCAGACGGATC                                                                                               >  SRR4302540.5170004/1‑94 (MQ=60)
GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATC                                                                                               <  SRR4302540.5345138/94‑1 (MQ=60)
 TTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCT                                                                                              >  SRR4302540.4782543/1‑94 (MQ=60)
  TATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTC                                                                                             <  SRR4302540.10152161/94‑1 (MQ=60)
  TATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTC                                                                                             >  SRR4302540.6285277/1‑94 (MQ=60)
   ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCT                                                                                            >  SRR4302540.4534401/1‑94 (MQ=60)
   ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCT                                                                                            >  SRR4302540.6389706/1‑94 (MQ=60)
   ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCT                                                                                            >  SRR4302540.8995819/1‑94 (MQ=60)
   ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCT                                                                                            <  SRR4302540.8686069/94‑1 (MQ=60)
      ccgggggcttttcatgatgttaaCCATCCCTTTTTTCAAGGGATCCAGGGGTGAACGTGGAGAGATATTTTTGCCATTAAGACGGATCTCTCCG                                                                                         <  SRR4302540.8043597/71‑1 (MQ=60)
      CCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCG                                                                                         <  SRR4302540.8820046/94‑1 (MQ=60)
       CGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGC                                                                                        >  SRR4302540.104658/1‑94 (MQ=60)
       CGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGC                                                                                        >  SRR4302540.98934/1‑94 (MQ=60)
        GGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCCGGGGTGAACGTGGCGAGATATCTTTGCCATTAAGACGGATCTCTCCGCC                                                                                       >  SRR4302540.5482192/1‑94 (MQ=60)
        GGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCC                                                                                       >  SRR4302540.9648134/1‑94 (MQ=60)
        GGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCC                                                                                       >  SRR4302540.9648133/1‑94 (MQ=60)
        GGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCC                                                                                       >  SRR4302540.4780763/1‑94 (MQ=60)
          CGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAG                                                                                     >  SRR4302540.9339821/1‑94 (MQ=60)
          CGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAG                                                                                     >  SRR4302540.8139909/1‑94 (MQ=60)
           GGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGTATCTCTCCGCCAGC                                                                                    >  SRR4302540.9563194/1‑94 (MQ=60)
           GGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGC                                                                                    >  SRR4302540.2089697/1‑94 (MQ=60)
            GCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCG                                                                                   <  SRR4302540.9777815/94‑1 (MQ=60)
            GCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTACGCCAGCG                                                                                   <  SRR4302540.6068501/94‑1 (MQ=60)
             CTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGC                                                                                  >  SRR4302540.1525798/1‑94 (MQ=60)
              TTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCG                                                                                 >  SRR4302540.6907169/1‑94 (MQ=60)
              TTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCG                                                                                 >  SRR4302540.4847243/1‑94 (MQ=60)
               TTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATTTTTGACATTAAGACGGATCTCTCTGCCAGCGCGT                                                                                >  SRR4302540.2620863/1‑94 (MQ=60)
               TTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGT                                                                                >  SRR4302540.3742087/1‑94 (MQ=60)
               TTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGT                                                                                >  SRR4302540.7208995/1‑94 (MQ=60)
                TCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTT                                                                               >  SRR4302540.5775192/1‑94 (MQ=60)
                TCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTT                                                                               >  SRR4302540.3975198/1‑94 (MQ=60)
                 CAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTT                                                                              <  SRR4302540.5248149/94‑1 (MQ=60)
                 CAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTT                                                                              <  SRR4302540.8885604/94‑1 (MQ=60)
                 CAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTT                                                                              <  SRR4302540.2061569/94‑1 (MQ=60)
                 CAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTT                                                                              <  SRR4302540.1993022/94‑1 (MQ=60)
                 CAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTT                                                                              <  SRR4302540.989839/94‑1 (MQ=60)
                  AGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTA                                                                             >  SRR4302540.7447673/1‑94 (MQ=60)
                   GTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTAT                                                                            >  SRR4302540.5473733/1‑94 (MQ=60)
                     GATGTAAGCCATCCCTTTTTTCACGGCACCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCC                                                                          >  SRR4302540.2206176/1‑94 (MQ=60)
                      ATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCA                                                                         <  SRR4302540.9257478/94‑1 (MQ=60)
                      ATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCA                                                                         >  SRR4302540.6845302/1‑94 (MQ=60)
                      ATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCA                                                                         >  SRR4302540.5128131/1‑94 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.3095727/94‑1 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.7025174/94‑1 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.2276779/94‑1 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.7292477/94‑1 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.1420282/94‑1 (MQ=60)
                       TGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        <  SRR4302540.1777854/94‑1 (MQ=60)
                       TGTAAGCCATACCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCAC                                                                        >  SRR4302540.3069859/1‑94 (MQ=60)
                        GTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACG                                                                       <  SRR4302540.1112797/94‑1 (MQ=60)
                        GTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACG                                                                       >  SRR4302540.5780918/1‑94 (MQ=60)
                          AAGCCATCCCTTTTTTCACGACATCCAGGGGTGAAAGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCC                                                                     <  SRR4302540.8736622/94‑1 (MQ=60)
                           AGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACTGATCTCTCCGCCAGCGCGTTTATCCACGCCA                                                                    >  SRR4302540.8262914/1‑94 (MQ=60)
                              TATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAAC                                                                 <  SRR4302540.4170630/94‑1 (MQ=60)
                              CATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAAC                                                                 >  SRR4302540.5279423/1‑94 (MQ=60)
                               ATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACA                                                                >  SRR4302540.1292215/1‑94 (MQ=60)
                               ATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACA                                                                >  SRR4302540.1121395/1‑94 (MQ=60)
                               ATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACA                                                                >  SRR4302540.552868/1‑94 (MQ=60)
                               ATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACA                                                                >  SRR4302540.2363864/1‑94 (MQ=60)
                               ATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGCAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACA                                                                <  SRR4302540.7022212/94‑1 (MQ=60)
                                TCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAG                                                               <  SRR4302540.8050585/94‑1 (MQ=60)
                                TCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAG                                                               <  SRR4302540.171305/94‑1 (MQ=60)
                                 CCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGA                                                              <  SRR4302540.7874917/94‑1 (MQ=60)
                                 CCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGA                                                              <  SRR4302540.2857138/94‑1 (MQ=60)
                                  CCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGAC                                                             <  SRR4302540.1572512/94‑1 (MQ=60)
                                  CCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGAC                                                             <  SRR4302540.8026992/94‑1 (MQ=60)
                                   ctgtgTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCACCAGCGCGTTTATCCACGCCAAACAGACA                                                            <  SRR4302540.5759842/89‑1 (MQ=60)
                                   CTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACA                                                            <  SRR4302540.5759843/94‑1 (MQ=60)
                                   CTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACA                                                            <  SRR4302540.1103112/94‑1 (MQ=60)
                                    TTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAA                                                           <  SRR4302540.5698404/94‑1 (MQ=60)
                                    TTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAA                                                           <  SRR4302540.6158865/94‑1 (MQ=60)
                                       TTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTC                                                        <  SRR4302540.4375260/94‑1 (MQ=60)
                                        TTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCA                                                       <  SRR4302540.260767/94‑1 (MQ=60)
                                        TTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCA                                                       <  SRR4302540.5663016/94‑1 (MQ=60)
                                         TCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAT                                                      <  SRR4302540.8632933/94‑1 (MQ=60)
                                          CACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGCTCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATC                                                     >  SRR4302540.3370387/1‑94 (MQ=60)
                                            gcttATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAG                                                   <  SRR4302540.3284439/90‑1 (MQ=60)
                                            CGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAG                                                   <  SRR4302540.6575702/94‑1 (MQ=60)
                                              GCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTT                                                 <  SRR4302540.4617436/94‑1 (MQ=60)
                                              GCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTT                                                 <  SRR4302540.2794153/94‑1 (MQ=60)
                                               CATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTC                                                >  SRR4302540.2534709/1‑94 (MQ=60)
                                               CATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTC                                                <  SRR4302540.4005231/94‑1 (MQ=60)
                                               CATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTC                                                <  SRR4302540.9638328/94‑1 (MQ=60)
                                               CATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTC                                                >  SRR4302540.3772186/1‑94 (MQ=60)
                                               CATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCACCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTC                                                >  SRR4302540.6724240/1‑94 (MQ=60)
                                                ATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCA                                               >  SRR4302540.5496148/1‑94 (MQ=60)
                                                 TCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAG                                              <  SRR4302540.4130336/94‑1 (MQ=60)
                                                 TCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAG                                              <  SRR4302540.4130337/94‑1 (MQ=60)
                                                 TCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAG                                              <  SRR4302540.6834879/94‑1 (MQ=60)
                                                 TCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAAGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAG                                              <  SRR4302540.6834880/94‑1 (MQ=60)
                                                  TCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGT                                             <  SRR4302540.3477338/94‑1 (MQ=60)
                                                  CCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGT                                             <  SRR4302540.3724868/94‑1 (MQ=60)
                                                  CCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGT                                             <  SRR4302540.6025970/94‑1 (MQ=60)
                                                   CAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTA                                            >  SRR4302540.8710735/1‑94 (MQ=60)
                                                   CAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTA                                            <  SRR4302540.8285843/94‑1 (MQ=60)
                                                   CAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTA                                            <  SRR4302540.1251289/94‑1 (MQ=60)
                                                   CAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTA                                            <  SRR4302540.2951236/94‑1 (MQ=60)
                                                    AGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAC                                           <  SRR4302540.2207492/94‑1 (MQ=60)
                                                    AGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAC                                           <  SRR4302540.2245350/94‑1 (MQ=60)
                                                    AGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAC                                           <  SRR4302540.1043874/94‑1 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          <  SRR4302540.2452403/94‑1 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          >  SRR4302540.6056379/1‑94 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          >  SRR4302540.1171585/1‑94 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          <  SRR4302540.8232287/94‑1 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          <  SRR4302540.9111671/94‑1 (MQ=60)
                                                     GGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACG                                          <  SRR4302540.3973051/94‑1 (MQ=60)
                                                       GGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTC                                        <  SRR4302540.2653872/94‑1 (MQ=60)
                                                       GGTGAACGTGGAGAGACATCTCTGCCATGAAGACTGATCTCTCCACCACCGCGTTTATCCACGCCAAACAAACAATTCATCAGTTCAGTACGTC                                        <  SRR4302540.4728267/94‑1 (MQ=60)
                                                        GTGAATGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCC                                       <  SRR4302540.2860140/94‑1 (MQ=60)
                                                        GTGAACGTGGAGAGATATCTTTGCCACTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCC                                       >  SRR4302540.1087552/1‑94 (MQ=60)
                                                          GAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGG                                     >  SRR4302540.5392187/1‑94 (MQ=60)
                                                          GAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGG                                     <  SRR4302540.5253819/94‑1 (MQ=60)
                                                          GAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGG                                     >  SRR4302540.3150467/1‑94 (MQ=60)
                                                          GAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGG                                     <  SRR4302540.1204839/94‑1 (MQ=60)
                                                          GAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGG                                     >  SRR4302540.573549/1‑94 (MQ=60)
                                                              GTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACC                                 >  SRR4302540.4904338/1‑94 (MQ=60)
                                                               TGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCG                                >  SRR4302540.1523762/1‑94 (MQ=60)
                                                                GGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGA                               <  SRR4302540.6205017/94‑1 (MQ=60)
                                                                 GAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGAC                              >  SRR4302540.1717228/1‑94 (MQ=60)
                                                                  AGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACC                             <  SRR4302540.3468300/94‑1 (MQ=60)
                                                                  AGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACC                             >  SRR4302540.7094061/1‑94 (MQ=60)
                                                                  AGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACC                             <  SRR4302540.6128842/94‑1 (MQ=60)
                                                                  AGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACC                             >  SRR4302540.5063539/1‑94 (MQ=60)
                                                                  AGAGATATCATTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACC                             <  SRR4302540.4175310/94‑1 (MQ=60)
                                                                   GAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCA                            <  SRR4302540.4123894/94‑1 (MQ=60)
                                                                   GAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCA                            >  SRR4302540.1701653/1‑94 (MQ=60)
                                                                    AGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAG                           <  SRR4302540.3629909/94‑1 (MQ=60)
                                                                    AGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAG                           <  SRR4302540.278286/94‑1 (MQ=60)
                                                                    AGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAG                           >  SRR4302540.1839952/1‑94 (MQ=60)
                                                                    AGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAG                           <  SRR4302540.6290857/94‑1 (MQ=60)
                                                                    AGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAG                           <  SRR4302540.56818/94‑1 (MQ=60)
                                                                     GATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGT                          <  SRR4302540.2283989/94‑1 (MQ=60)
                                                                     GATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGT                          >  SRR4302540.5056524/1‑94 (MQ=60)
                                                                     GATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGT                          >  SRR4302540.2977928/1‑94 (MQ=60)
                                                                      ATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTC                         >  SRR4302540.1032416/1‑94 (MQ=60)
                                                                      ATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTC                         >  SRR4302540.117043/1‑94 (MQ=60)
                                                                      ATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTC                         >  SRR4302540.1395447/1‑94 (MQ=60)
                                                                      ATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTC                         <  SRR4302540.7216092/94‑1 (MQ=60)
                                                                      ATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTC                         >  SRR4302540.1223447/1‑94 (MQ=60)
                                                                       TATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCC                        <  SRR4302540.4383152/94‑1 (MQ=60)
                                                                       TATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCC                        >  SRR4302540.7641890/1‑94 (MQ=60)
                                                                       TATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCC                        >  SRR4302540.829239/1‑94 (MQ=60)
                                                                        ATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCG                       >  SRR4302540.9688033/1‑94 (MQ=60)
                                                                        ATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCG                       >  SRR4302540.5354843/1‑94 (MQ=60)
                                                                         TCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGG                      <  SRR4302540.311257/94‑1 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGC                     >  SRR4302540.4445362/1‑94 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGC                     >  SRR4302540.7776217/1‑94 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGC                     >  SRR4302540.6601468/1‑94 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGC                     >  SRR4302540.6113735/1‑94 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGC                     >  SRR4302540.9572376/1‑94 (MQ=60)
                                                                          CTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTAACCACGCCAAACAGACAATTCATACGTTCAGTCCGTCCGGAGCCGACCAGTCCGGC                     >  SRR4302540.8253436/1‑94 (MQ=60)
                                                                           TTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTTAGTACGTCCGGAACCGACCAGTCCGGCA                    <  SRR4302540.5461226/94‑1 (MQ=60)
                                                                             TGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAC                  >  SRR4302540.9676710/1‑94 (MQ=60)
                                                                             TGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAA                  <  SRR4302540.1417290/94‑1 (MQ=60)
                                                                             TGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAA                  <  SRR4302540.2139056/94‑1 (MQ=60)
                                                                              GCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAG                 <  SRR4302540.9656694/94‑1 (MQ=60)
                                                                              GCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAG                 <  SRR4302540.1196288/94‑1 (MQ=60)
                                                                               CCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGC                >  SRR4302540.757817/1‑94 (MQ=60)
                                                                               CCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGC                <  SRR4302540.3372677/94‑1 (MQ=60)
                                                                               CCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGC                >  SRR4302540.7149970/1‑94 (MQ=60)
                                                                                CATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCACAGCC               >  SRR4302540.1430174/1‑94 (MQ=60)
                                                                                CATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCC               >  SRR4302540.249865/1‑94 (MQ=60)
                                                                                CATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCC               >  SRR4302540.6474779/1‑94 (MQ=60)
                                                                                CATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCC               >  SRR4302540.9419164/1‑94 (MQ=60)
                                                                                CATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCC               >  SRR4302540.31952/1‑94 (MQ=60)
                                                                                 ATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCT              >  SRR4302540.1545691/1‑94 (MQ=60)
                                                                                 ATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCT              <  SRR4302540.7658163/94‑1 (MQ=60)
                                                                                  TTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTA             >  SRR4302540.3934208/1‑94 (MQ=60)
                                                                                  TTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTA             <  SRR4302540.2047008/94‑1 (MQ=60)
                                                                                  TTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTA             >  SRR4302540.1995693/1‑94 (MQ=60)
                                                                                  TTAAGAAGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTA             <  SRR4302540.7936345/94‑1 (MQ=60)
                                                                                   TAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAA            <  SRR4302540.952419/94‑1 (MQ=60)
                                                                                   TAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAA            <  SRR4302540.700686/94‑1 (MQ=60)
                                                                                   TAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAA            <  SRR4302540.5983325/94‑1 (MQ=60)
                                                                                   TAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAA            <  SRR4302540.3801319/94‑1 (MQ=60)
                                                                                   TAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAA            >  SRR4302540.2463082/1‑94 (MQ=60)
                                                                                    AAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAAT           >  SRR4302540.3403664/1‑94 (MQ=60)
                                                                                     AGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATA          <  SRR4302540.4068012/94‑1 (MQ=60)
                                                                                     AGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATA          <  SRR4302540.10048325/94‑1 (MQ=60)
                                                                                     AGA‑GGATTTCTCCGCCAGCGCGTTTTTCCACCACAAGCAGACAATTCATCAGTTTAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAT         <  SRR4302540.5151669/94‑1 (MQ=60)
                                                                                      GACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAT         >  SRR4302540.792339/1‑94 (MQ=60)
                                                                                      GACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAT         <  SRR4302540.5151668/94‑1 (MQ=60)
                                                                                       ACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATT        >  SRR4302540.8679862/1‑94 (MQ=60)
                                                                                       ACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATT        >  SRR4302540.75509/1‑94 (MQ=60)
                                                                                        CGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTT       <  SRR4302540.7797515/94‑1 (MQ=60)
                                                                                        CGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTT       <  SRR4302540.6228454/94‑1 (MQ=60)
                                                                                        CGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTT       >  SRR4302540.444087/1‑94 (MQ=60)
                                                                                         GGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC      >  SRR4302540.10147773/1‑94 (MQ=60)
                                                                                         GGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC      >  SRR4302540.8910225/1‑94 (MQ=60)
                                                                                         GGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC      >  SRR4302540.184181/1‑94 (MQ=60)
                                                                                         GGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC      <  SRR4302540.1382392/94‑1 (MQ=60)
                                                                                          GATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCT     >  SRR4302540.9124448/1‑94 (MQ=60)
                                                                                          GATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCT     >  SRR4302540.3450897/1‑94 (MQ=60)
                                                                                           ATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTC    >  SRR4302540.9960649/1‑94 (MQ=60)
                                                                                            TCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCC   >  SRR4302540.7134981/1‑94 (MQ=60)
                                                                                            TCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCC   >  SRR4302540.4020996/1‑94 (MQ=60)
                                                                                             CTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAGGCCTAATATTTCTtgc  >  SRR4302540.1140818/1‑91 (MQ=60)
                                                                                             CTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCCC  <  SRR4302540.3031846/94‑1 (MQ=60)
                                                                                             CTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCCC  <  SRR4302540.2577731/94‑1 (MQ=60)
                                                                                             CTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCCC  >  SRR4302540.1140819/1‑94 (MQ=60)
                                                                                             |                                                                                             
GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTCTCCC  >  NC_000913/4307510‑4307696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑