Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,333,152	A→G	L16P (CTA→CCA)	yjdB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,333,152	0	A	G	100.0%	1693.1 / NA	524	L16P (CTA→CCA)	yjdB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (288/236); total (288/236)

Only 100 of 557 total aligned reads displayed.

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

acCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggt                                                                                         <  1:53112/93‑1 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCACAGAGGGTCTTTTtggta                                                                                        >  2:4243100/1‑93 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        <  2:8375040/93‑1 (MQ=255)

   tGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAgg                                                                                      >  1:9355221/1‑93 (MQ=255)

   tGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAgg                                                                                      <  1:5002248/93‑1 (MQ=255)

     tttAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGgcg                                                                                    >  1:6642978/1‑93 (MQ=255)

         aaaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTc                                                                                >  2:236107/1‑93 (MQ=255)

           aaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCaa                                                                              >  1:7049304/1‑93 (MQ=255)

           aaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCaa                                                                              <  2:953106/93‑1 (MQ=255)

             aGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACa                                                                            >  1:1430894/1‑93 (MQ=255)

             aGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACa                                                                            >  2:9667424/1‑93 (MQ=255)

             aGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACa                                                                            <  2:9260518/93‑1 (MQ=255)

              ggCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAt                                                                           >  1:4279019/1‑93 (MQ=255)

                 aaTATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAc                                                                        >  2:5856380/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      >  2:9178014/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      >  2:4471585/1‑93 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     <  1:468809/93‑1 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTATTTGGTAGGCGCTTCAACATGACGgt                                                                     >  1:6909565/1‑93 (MQ=255)

                      tCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtgt                                                                   <  1:2964936/93‑1 (MQ=255)

                       cAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGtt                                                                  >  1:2063578/1‑93 (MQ=255)

                        aGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGttt                                                                 <  2:4876819/93‑1 (MQ=255)

                         ggCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTc                                                                >  2:3501423/1‑93 (MQ=255)

                         ggCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTc                                                                >  2:6497525/1‑93 (MQ=255)

                          gCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTcc                                                               >  1:6549572/1‑93 (MQ=255)

                            aGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAt                                                             <  2:9841707/93‑1 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            >  1:612934/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            >  2:3274632/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            >  2:1401596/1‑93 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          <  2:3097350/93‑1 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          >  2:6458232/1‑93 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         >  2:3678209/1‑93 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         <  2:2660848/93‑1 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         >  2:7040946/1‑93 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         <  1:3211981/93‑1 (MQ=255)

                                  agaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCTCGGTGTTTCCATCGAACa                                                       <  2:6024733/93‑1 (MQ=255)

                                   gaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACaa                                                      >  2:5295170/1‑93 (MQ=255)

                                    atatAAAAAGCGGCAAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTGTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACaaa                                                     <  1:7742681/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:9145170/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    >  1:8098950/1‑93 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:1564072/93‑1 (MQ=255)

                                       taAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTg                                                  <  2:1907884/93‑1 (MQ=255)

                                        aaaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgc                                                 >  2:7571264/1‑93 (MQ=255)

                                        aaaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgc                                                 >  1:188149/1‑93 (MQ=255)

                                         aaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgcg                                                <  1:7613965/93‑1 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCGTCGAACAAAGTGCGCa                                              <  2:7661512/93‑1 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCa                                              <  2:1163401/93‑1 (MQ=255)

                                            aGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCat                                             >  1:9851319/1‑93 (MQ=255)

                                             gCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCata                                            <  1:10015909/93‑1 (MQ=255)

                                              cGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCatat                                           <  2:1320594/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          <  2:8875190/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          >  1:7932474/1‑93 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          <  1:4904860/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTGCCATCGAACAAAGTGCGCATATg                                          >  2:5518417/1‑93 (MQ=255)

                                                gCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGc                                         <  1:3532474/93‑1 (MQ=255)

                                                 ccAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCt                                        <  1:3778139/93‑1 (MQ=255)

                                                   aacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCg                                      >  1:3398843/1‑93 (MQ=255)

                                                    acaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgc                                     >  1:9560537/1‑93 (MQ=255)

                                                     caaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgca                                    >  2:8686284/1‑93 (MQ=255)

                                                     caaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgca                                    >  1:3898329/1‑93 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  <  1:8676590/93‑1 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 <  1:1130188/93‑1 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 <  1:5905849/93‑1 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 <  1:6487085/93‑1 (MQ=255)

                                                        tAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaag                                 >  2:397979/1‑93 (MQ=255)

                                                          gCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagca                               >  2:6141991/1‑93 (MQ=255)

                                                            cAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagcaaa                             >  1:4524705/1‑93 (MQ=255)

                                                            cAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagcaaa                             >  1:7312205/1‑93 (MQ=255)

                                                             aGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCaaaa                            >  2:5165191/1‑93 (MQ=255)

                                                             aGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCaaaa                            >  1:1617956/1‑93 (MQ=255)

                                                             aGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCaaaa                            <  1:5207524/93‑1 (MQ=255)

                                                               gCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAtt                          <  1:9448778/93‑1 (MQ=255)

                                                                 gAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTaa                        <  2:8098949/93‑1 (MQ=255)

                                                                 gAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTaa                        <  1:2627049/93‑1 (MQ=255)

                                                                  aGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCCTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAg                       <  1:5116463/93‑1 (MQ=255)

                                                                   gTAAATTCAAAGAGTGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGAATATGCTCGCAAAGCAAAATTAAGc                      <  1:8811665/93‑1 (MQ=255)

                                                                   gTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGc                      <  2:4347024/93‑1 (MQ=255)

                                                                    tAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGcc                     >  2:341615/1‑93 (MQ=255)

                                                                    tAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGcc                     >  2:20339/1‑93 (MQ=255)

                                                                      aaTTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCaa                   <  2:4566732/93‑1 (MQ=255)

                                                                       aTTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAc                  >  2:7739847/1‑93 (MQ=255)

                                                                        ttCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAcc                 >  1:5677614/1‑93 (MQ=255)

                                                                         tCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCt                >  1:8008791/1‑93 (MQ=255)

                                                                          cAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCtt               >  1:5518519/1‑93 (MQ=255)

                                                                          cAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCtt               >  2:565605/1‑93 (MQ=255)

                                                                          cAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCtt               <  1:7549397/93‑1 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             >  2:7460245/1‑93 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             <  1:7451705/93‑1 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  1:9643967/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  2:413081/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  2:2430677/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  2:2923908/1‑93 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          <  2:7150670/93‑1 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  1:9007508/1‑93 (MQ=255)

                                                                                gggTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATTCTCGCAAAGCAAAATTAAGCCAACCTTAAGATc         >  2:8950069/1‑93 (MQ=255)

                                                                                gggTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTc         >  2:6853280/1‑93 (MQ=255)

                                                                                gggTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTc         <  2:6643271/93‑1 (MQ=255)

                                                                                  gTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCtt       >  2:4404110/1‑93 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    >  1:2504943/1‑93 (MQ=255)

                                                                                      ttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAgg   >  2:734051/1‑93 (MQ=255)

                                                                                       tttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGt  <  1:8239118/93‑1 (MQ=255)

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 293 total aligned reads displayed.

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGGC  >  NC_000913/4333059‑4333245

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               >  SRR4302540.7493691/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               >  SRR4302540.9306058/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               >  SRR4302540.9318161/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGCCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                               >  SRR4302540.1402002/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              <  SRR4302540.3875137/94‑1 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              >  SRR4302540.9325135/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                              >  SRR4302540.1426718/1‑94 (MQ=60)

  CACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGT                                                                                             <  SRR4302540.2571231/94‑1 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302540.9867678/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            <  SRR4302540.53640/94‑1 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            <  SRR4302540.9159888/94‑1 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302540.1588459/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                            >  SRR4302540.115013/1‑94 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           <  SRR4302540.4667675/94‑1 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                           <  SRR4302540.16166/94‑1 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                          >  SRR4302540.5702519/1‑94 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         <  SRR4302540.7015143/94‑1 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         >  SRR4302540.946822/1‑94 (MQ=60)

      TGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGC                                                                                         <  SRR4302540.5056417/94‑1 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCG                                                                                        >  SRR4302540.6716481/1‑94 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCG                                                                                        >  SRR4302540.8934899/1‑94 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGATCTTTTTGGTAGGCG                                                                                        >  SRR4302540.9465909/1‑94 (MQ=60)

         TTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCT                                                                                      >  SRR4302540.5356756/1‑94 (MQ=60)

         TTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCT                                                                                      >  SRR4302540.9005567/1‑94 (MQ=60)

         TTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCT                                                                                      >  SRR4302540.3634573/1‑94 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTT                                                                                     <  SRR4302540.1867668/94‑1 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTT                                                                                     >  SRR4302540.1331320/1‑94 (MQ=60)

           AAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTC                                                                                    >  SRR4302540.8066340/1‑94 (MQ=60)

           AAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTC                                                                                    >  SRR4302540.4536252/1‑94 (MQ=60)

           AAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTC                                                                                    <  SRR4302540.8174214/94‑1 (MQ=60)

             AAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAA                                                                                  >  SRR4302540.7127698/1‑94 (MQ=60)

              AAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAC                                                                                 <  SRR4302540.7779869/94‑1 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTTGTACGCGCTTCAACA                                                                                >  SRR4302540.9655516/1‑94 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                                <  SRR4302540.9128907/94‑1 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                                >  SRR4302540.1446397/1‑94 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                                >  SRR4302540.1446398/1‑94 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               >  SRR4302540.3899840/1‑94 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               >  SRR4302540.4325562/1‑94 (MQ=60)

                AGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAT                                                                               >  SRR4302540.4580436/1‑94 (MQ=60)

                 AGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATC                                                                              <  SRR4302540.9594021/94‑1 (MQ=60)

                  GCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCA                                                                             >  SRR4302540.3011740/1‑94 (MQ=60)

                  GCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCA                                                                             <  SRR4302540.9687839/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGAGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                            >  SRR4302540.5848143/1‑94 (MQ=60)

                    CATATTCAGGCAGATAGAGATATAAATAGCGGCCAACAATAGCCAGTCCAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           <  SRR4302540.1513025/94‑1 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           <  SRR4302540.1513026/94‑1 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302540.9527435/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302540.7434898/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           >  SRR4302540.525914/1‑94 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                           <  SRR4302540.6059814/94‑1 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          <  SRR4302540.9335286/94‑1 (MQ=60)

                     ATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGG                                                                          >  SRR4302540.3914305/1‑94 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                         <  SRR4302540.5510169/94‑1 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                         >  SRR4302540.4788757/1‑94 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTATTTGGTAGGCGCTTCAACATGACGGT                                                                         >  SRR4302540.6986429/1‑94 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCCGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGGCTGTTTGGTAGGCTCTTCAACATCcaggt                                                                         >  SRR4302540.6986428/1‑89 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                        <  SRR4302540.473829/94‑1 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                        >  SRR4302540.5503526/1‑94 (MQ=60)

                        TTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGT                                                                       <  SRR4302540.7947125/94‑1 (MQ=60)

                         TCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTT                                                                      <  SRR4302540.2997649/94‑1 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                     >  SRR4302540.2498662/1‑94 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                     <  SRR4302540.1908147/94‑1 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                     >  SRR4302540.666830/1‑94 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                     >  SRR4302540.8160671/1‑94 (MQ=60)

                           AGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTC                                                                    >  SRR4302540.7158427/1‑94 (MQ=60)

                            GGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCC                                                                   >  SRR4302540.6622222/1‑94 (MQ=60)

                            GGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCC                                                                   >  SRR4302540.6622221/1‑94 (MQ=60)

                             GCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCA                                                                  >  SRR4302540.9867512/1‑94 (MQ=60)

                             GCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCA                                                                  >  SRR4302540.613918/1‑94 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                 <  SRR4302540.3302027/94‑1 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                 <  SRR4302540.724978/94‑1 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                                >  SRR4302540.10065956/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                                >  SRR4302540.5199409/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                                >  SRR4302540.619477/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGGCTTTTTGGTAGGCGCTTCAACATCACGGGGTTTCCATC                                                                >  SRR4302540.8286482/1‑94 (MQ=60)

                                GATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCTCTTCAACATCACGGTGTTTCCATCG                                                               >  SRR4302540.10018645/1‑94 (MQ=60)

                                GATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCG                                                               <  SRR4302540.2009033/94‑1 (MQ=60)

                                GATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCG                                                               >  SRR4302540.1052219/1‑94 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                              <  SRR4302540.2722697/94‑1 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                              >  SRR4302540.5157452/1‑94 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCCA                                                              >  SRR4302540.7596271/1‑94 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAA                                                             >  SRR4302540.6622255/1‑94 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGACTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAC                                                             >  SRR4302540.8711893/1‑94 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                            <  SRR4302540.878722/94‑1 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                            <  SRR4302540.3246849/94‑1 (MQ=60)

                                      GATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAA                                                         >  SRR4302540.8897175/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGCGGGTCTTTTTGGTAGCCGCTTCAACATCACGGTGTTTCGATCGAACAAAG                                                        >  SRR4302540.2630339/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        >  SRR4302540.9192791/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        <  SRR4302540.31780/94‑1 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        >  SRR4302540.8192952/1‑94 (MQ=60)

                                       ATATAAAAAGCGGCAAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTGTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                        <  SRR4302540.7833077/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCCAACAAAGT                                                       >  SRR4302540.3101206/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                      <  SRR4302540.9539949/94‑1 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                      >  SRR4302540.955782/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                      >  SRR4302540.6570410/1‑94 (MQ=60)

                                          TAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGC                                                     >  SRR4302540.373313/1‑94 (MQ=60)

                                           AAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCG                                                    >  SRR4302540.7762991/1‑94 (MQ=60)

                                           AAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCG                                                    <  SRR4302540.918033/94‑1 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                   <  SRR4302540.7860791/94‑1 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                   <  SRR4302540.7699560/94‑1 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                   >  SRR4302540.4926563/1‑94 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                   <  SRR4302540.7699561/94‑1 (MQ=60)

                                             AAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCA                                                  >  SRR4302540.829929/1‑94 (MQ=60)

                                              AAGCGGCCAACACTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                 <  SRR4302540.4609274/94‑1 (MQ=60)

                                              AAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                 <  SRR4302540.5160973/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCTCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.1778883/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.578270/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.10132499/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.2909486/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.6662367/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTAAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                               <  SRR4302540.5535757/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              <  SRR4302540.9795607/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              <  SRR4302540.5075846/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              >  SRR4302540.8024934/1‑94 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                              <  SRR4302540.9527432/94‑1 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                             >  SRR4302540.7510091/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                             <  SRR4302540.4957639/94‑1 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                            <  SRR4302540.3571034/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           <  SRR4302540.3423285/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           >  SRR4302540.4274269/1‑94 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           <  SRR4302540.5338552/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           <  SRR4302540.481114/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                           <  SRR4302540.3819354/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          <  SRR4302540.4359478/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          >  SRR4302540.3435902/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          <  SRR4302540.9433287/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                          <  SRR4302540.6155254/94‑1 (MQ=60)

                                                      AACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGC                                         >  SRR4302540.9673568/1‑94 (MQ=60)

                                                       ACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCA                                        >  SRR4302540.3940634/1‑94 (MQ=60)

                                                       ACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCA                                        >  SRR4302540.7027873/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                      >  SRR4302540.8108173/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                      >  SRR4302540.1965913/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                      >  SRR4302540.7437370/1‑94 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                     >  SRR4302540.844362/1‑94 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                     <  SRR4302540.8777363/94‑1 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                     >  SRR4302540.721151/1‑94 (MQ=60)

                                                           TAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGC                                    <  SRR4302540.1141946/94‑1 (MQ=60)

                                                           TAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGC                                    <  SRR4302540.7550904/94‑1 (MQ=60)

                                                            AGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCA                                   <  SRR4302540.3483789/94‑1 (MQ=60)

                                                              CCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAA                                 >  SRR4302540.4573702/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.4086303/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.56909/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.5021236/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.9700372/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.1635700/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAA                                >  SRR4302540.1615074/1‑94 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               <  SRR4302540.5264251/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               <  SRR4302540.4494722/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                               <  SRR4302540.8048374/94‑1 (MQ=60)

                                                                   CGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                            >  SRR4302540.5334238/1‑94 (MQ=60)

                                                                   CGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                            >  SRR4302540.7708204/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCACAATTAAG                           >  SRR4302540.5011374/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           >  SRR4302540.7941624/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                           <  SRR4302540.2655464/94‑1 (MQ=60)

                                                                     AGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGC                          <  SRR4302540.8083393/94‑1 (MQ=60)

                                                                     AGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCCTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGC                          <  SRR4302540.5171853/94‑1 (MQ=60)

                                                                      GTAAATTCAAAGAGTGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGAATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302540.8913542/94‑1 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         >  SRR4302540.902825/1‑94 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302540.1524999/94‑1 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302540.9043945/94‑1 (MQ=60)

                                                                      GTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCC                         <  SRR4302540.6820490/94‑1 (MQ=60)

                                                                       TAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCA                        <  SRR4302540.6317138/94‑1 (MQ=60)

                                                                       GAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCA                        <  SRR4302540.7622269/94‑1 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       >  SRR4302540.6840926/1‑94 (MQ=60)

                                                                        AAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAA                       <  SRR4302540.7266863/94‑1 (MQ=60)

                                                                         AATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAC                      >  SRR4302540.2222423/1‑94 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                     >  SRR4302540.5740131/1‑94 (MQ=60)

                                                                           TGCAAAGAGGGTCTTTTTGGTAGTCGCTTCAACATCACTGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCT                    <  SRR4302540.1933624/94‑1 (MQ=60)

                                                                            TCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTT                   <  SRR4302540.1022066/94‑1 (MQ=60)

                                                                            TCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTT                   >  SRR4302540.5579302/1‑94 (MQ=60)

                                                                            TCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTT                   >  SRR4302540.2562231/1‑94 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCGCGGTGTTTCCATCGAACAAAGGGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  >  SRR4302540.7543292/1‑94 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  >  SRR4302540.4292272/1‑94 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  <  SRR4302540.7634018/94‑1 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  <  SRR4302540.5934938/94‑1 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                  <  SRR4302540.8649307/94‑1 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCGAAGCAAAATTAAGCCACCCTTAA                 >  SRR4302540.1333736/1‑94 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                 <  SRR4302540.2667132/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG                <  SRR4302540.2211131/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG                >  SRR4302540.6362243/1‑94 (MQ=60)

                                                                                AGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT               >  SRR4302540.9757554/1‑94 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAGCAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT              >  SRR4302540.369859/1‑94 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT            >  SRR4302540.6603775/1‑94 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT            >  SRR4302540.3443244/1‑94 (MQ=60)

                                                                                    GGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTT           <  SRR4302540.6434725/94‑1 (MQ=60)

                                                                                     GTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTA          >  SRR4302540.1636715/1‑94 (MQ=60)

                                                                                      TCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAA         >  SRR4302540.6924047/1‑94 (MQ=60)

                                                                                      TCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAA         >  SRR4302540.336052/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        >  SRR4302540.5191899/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        >  SRR4302540.7649260/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        <  SRR4302540.971029/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG        >  SRR4302540.2531979/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGAGTTTCCATCGACCAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTCAAGTTCTTAAG        >  SRR4302540.2583230/1‑94 (MQ=60)

                                                                                        TTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGG       >  SRR4302540.641033/1‑94 (MQ=60)

                                                                                         TTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT      <  SRR4302540.8114714/94‑1 (MQ=60)

                                                                                          TTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTT     <  SRR4302540.8334874/94‑1 (MQ=60)

                                                                                          TTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTT     <  SRR4302540.5915842/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG    <  SRR4302540.2476665/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG    <  SRR4302540.3497832/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG    <  SRR4302540.1584720/94‑1 (MQ=60)

                                                                                            TGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGG   <  SRR4302540.8877428/94‑1 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGGC  >  NC_000913/4333059‑4333245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`