Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1624	250.6	12620048	98.0%	12367647	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,333,152	A→G	L16P (CTA→CCA)	yjdB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,333,152	0	A	G	100.0%	851.1 / NA	263	L16P (CTA→CCA)	yjdB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (126/137); total (126/137)

Only 100 of 288 total aligned reads displayed.

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

acCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggt                                                                                         <  1:3794996/93‑1 (MQ=255)

acCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggt                                                                                         >  2:3526787/1‑93 (MQ=255)

acCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggt                                                                                         <  2:3548712/93‑1 (MQ=255)

acCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggt                                                                                         >  1:2792689/1‑93 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        >  2:1233848/1‑93 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        >  1:5235479/1‑93 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        <  1:4398859/93‑1 (MQ=255)

 ccTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggta                                                                                        >  1:205626/1‑93 (MQ=255)

  cTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggtag                                                                                       <  2:1628148/93‑1 (MQ=255)

  cTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTtggtag                                                                                       <  1:3567895/93‑1 (MQ=255)

   tGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAgg                                                                                      >  1:4826727/1‑93 (MQ=255)

      ttAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGgcgc                                                                                   >  2:1482215/1‑93 (MQ=255)

         aaaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTc                                                                                <  1:4341290/93‑1 (MQ=255)

         aaaaaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTc                                                                                <  1:3124868/93‑1 (MQ=255)

            aaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAc                                                                             <  1:6257850/93‑1 (MQ=255)

            aaGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAc                                                                             <  2:6221241/93‑1 (MQ=255)

             aGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACa                                                                            <  2:4453166/93‑1 (MQ=255)

             aGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACa                                                                            <  2:6101641/93‑1 (MQ=255)

              ggCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAt                                                                           >  2:4638996/1‑93 (MQ=255)

              ggCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACAt                                                                           >  2:2625873/1‑93 (MQ=255)

               gCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATc                                                                          >  2:344242/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      >  2:3939430/1‑93 (MQ=255)

                   tatTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACgg                                                                      <  1:1968600/93‑1 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     <  2:475392/93‑1 (MQ=255)

                    atTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgt                                                                     >  2:5348196/1‑93 (MQ=255)

                     ttCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtg                                                                    >  1:769307/1‑93 (MQ=255)

                      tCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtgt                                                                   <  1:236855/93‑1 (MQ=255)

                      tCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtgt                                                                   <  2:4081336/93‑1 (MQ=255)

                      tCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGgtgt                                                                   <  1:4278733/93‑1 (MQ=255)

                          gCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTcc                                                               <  2:2640439/93‑1 (MQ=255)

                          gCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTcc                                                               <  2:5576665/93‑1 (MQ=255)

                           cAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCa                                                              >  2:2030173/1‑93 (MQ=255)

                            aGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAt                                                             >  1:5644017/1‑93 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            <  2:5260950/93‑1 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATc                                                            <  2:5899239/93‑1 (MQ=255)

                             gATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGAGCTTCAACATCACGGTGATTCCATc                                                            >  1:951158/1‑93 (MQ=255)

                               tAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGa                                                          >  1:1477379/1‑93 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGTGCTTCAACATCACGGTGTTTCCATCGaa                                                         <  1:3878300/93‑1 (MQ=255)

                                agagATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGaa                                                         <  2:489132/93‑1 (MQ=255)

                                 gagaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAc                                                        >  1:5877309/1‑93 (MQ=255)

                                 gagaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAc                                                        <  2:4350685/93‑1 (MQ=255)

                                   gaTATAAAAAGCGGCCCACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGTGGTTTCCATCGaaaca                                                      >  1:1711164/1‑90 (MQ=255)

                                   gaTATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACaa                                                      >  2:3236065/1‑93 (MQ=255)

                                    atatAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACaaa                                                     <  1:5015984/93‑1 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    >  1:1646720/1‑93 (MQ=255)

                                     tataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAg                                                    <  1:5061593/93‑1 (MQ=255)

                                      ataAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGt                                                   >  1:2424052/1‑93 (MQ=255)

                                       taAAAATCGTCAAACAATAGCCAGGCGAGGAAATTCAAAGAGGGACTTTTTTGAATGCGCTTCAACATCACGGTGTTTCCATCAAACAAAgac                                                  >  2:5702579/1‑91 (MQ=255)

                                       taAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTg                                                  >  2:1881321/1‑93 (MQ=255)

                                       taAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTg                                                  >  1:1125537/1‑93 (MQ=255)

                                       taAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTg                                                  >  1:1254167/1‑93 (MQ=255)

                                         aaaaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTgcg                                                >  2:308922/1‑93 (MQ=255)

                                           aaGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCa                                              >  2:3313965/1‑93 (MQ=255)

                                            aGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCat                                             <  1:1531440/93‑1 (MQ=255)

                                             gCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCata                                            <  1:1186333/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          <  1:1730506/93‑1 (MQ=255)

                                               ggCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATg                                          <  1:4710958/93‑1 (MQ=255)

                                                gCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGc                                         >  1:400491/1‑93 (MQ=255)

                                                gCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGc                                         <  2:2570589/93‑1 (MQ=255)

                                                gCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGc                                         <  2:3874554/93‑1 (MQ=255)

                                                 ccAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCt                                        <  1:143476/93‑1 (MQ=255)

                                                  caacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTc                                       <  2:6172218/93‑1 (MQ=255)

                                                   aacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCg                                      >  1:5812733/1‑93 (MQ=255)

                                                   aacaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCg                                      >  1:1032608/1‑93 (MQ=255)

                                                    acaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgc                                     >  1:5325643/1‑93 (MQ=255)

                                                    acaaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgc                                     <  1:2082712/93‑1 (MQ=255)

                                                     caaTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgca                                    <  2:5751972/93‑1 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  >  1:2651802/1‑93 (MQ=255)

                                                       aTAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaa                                  <  1:3330966/93‑1 (MQ=255)

                                                         aGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagc                                <  1:3505611/93‑1 (MQ=255)

                                                          gCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagca                               >  2:108084/1‑93 (MQ=255)

                                                            cAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCgcaaagaaaa                             <  1:6101830/93‑1 (MQ=255)

                                                               gCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAtt                          >  2:4695985/1‑93 (MQ=255)

                                                                 gAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTaa                        <  1:2691988/93‑1 (MQ=255)

                                                                 gAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTaa                        >  1:2239929/1‑93 (MQ=255)

                                                                  aGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAg                       >  2:1337428/1‑93 (MQ=255)

                                                                   gTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGc                      >  2:3351414/1‑93 (MQ=255)

                                                                   gTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGc                      <  2:1368967/93‑1 (MQ=255)

                                                                       aTTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAc                  <  1:3729704/93‑1 (MQ=255)

                                                                       aTTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAc                  <  1:4069306/93‑1 (MQ=255)

                                                                        ttCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAcc                 <  2:1126227/93‑1 (MQ=255)

                                                                          cAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCtt               >  1:3161653/1‑93 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             <  1:5390472/93‑1 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             <  1:5494916/93‑1 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             <  1:2512224/93‑1 (MQ=255)

                                                                            aaGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaa             <  1:4906645/93‑1 (MQ=255)

                                                                             agagGGTCTTTTTGGTAGGCGCTTCAACATCACGGCGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTaat            >  1:192735/1‑92 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  2:1033089/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           >  1:2824637/1‑93 (MQ=255)

                                                                              gagGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGt           <  1:4569227/93‑1 (MQ=255)

                                                                               agGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGtt          >  2:846310/1‑93 (MQ=255)

                                                                                  gTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCtt       <  2:517934/93‑1 (MQ=255)

                                                                                  gTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCtt       <  2:2732979/93‑1 (MQ=255)

                                                                                  gTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCtt       <  1:596843/93‑1 (MQ=255)

                                                                                    cTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTaa     <  2:5642880/93‑1 (MQ=255)

                                                                                    cTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTaa     <  2:2315030/93‑1 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTCAGTTCTTAAg    >  2:5795844/1‑93 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    >  2:2773996/1‑93 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    >  1:862870/1‑93 (MQ=255)

                                                                                     tttttGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGGGCGCATATGTTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAg    >  2:5080417/1‑93 (MQ=255)

ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGT  >  NC_000913/4333062‑4333241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGG  >  NC_000913/4333059‑4333244

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                              >  SRR4302533.3443651/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTG                                                                                              <  SRR4302533.4436889/94‑1 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                             <  SRR4302533.1026980/94‑1 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                             >  SRR4302533.1133340/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                             >  SRR4302533.619126/1‑94 (MQ=60)

 ACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGG                                                                                             >  SRR4302533.701320/1‑94 (MQ=60)

  CACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGT                                                                                            >  SRR4302533.2809866/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                           >  SRR4302533.5869082/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                           >  SRR4302533.206929/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                           <  SRR4302533.3818222/94‑1 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                           >  SRR4302533.5266959/1‑94 (MQ=60)

   ACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTA                                                                                           >  SRR4302533.5007111/1‑94 (MQ=60)

    CCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAG                                                                                          <  SRR4302533.4425417/94‑1 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         >  SRR4302533.5886257/1‑94 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         >  SRR4302533.2091135/1‑94 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         <  SRR4302533.5460695/94‑1 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         >  SRR4302533.4855976/1‑94 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         <  SRR4302533.3589883/94‑1 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         <  SRR4302533.3943173/94‑1 (MQ=60)

     CTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGG                                                                                         >  SRR4302533.4069449/1‑94 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCG                                                                                       >  SRR4302533.2710749/1‑94 (MQ=60)

       GTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCG                                                                                       >  SRR4302533.775586/1‑94 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTT                                                                                    >  SRR4302533.3466943/1‑94 (MQ=60)

          TAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGAGAGTAAATTAAAAGAGGGACTTTTTGGTACGCGCTT                                                                                    >  SRR4302533.4033128/1‑94 (MQ=60)

           AAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTC                                                                                   <  SRR4302533.1692678/94‑1 (MQ=60)

            AAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCA                                                                                  <  SRR4302533.3144075/94‑1 (MQ=60)

            AAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCA                                                                                  <  SRR4302533.2361256/94‑1 (MQ=60)

            AAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCA                                                                                  <  SRR4302533.4367454/94‑1 (MQ=60)

              AAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAC                                                                                <  SRR4302533.5540326/94‑1 (MQ=60)

              AAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAAC                                                                                >  SRR4302533.3489656/1‑94 (MQ=60)

               AAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACA                                                                               <  SRR4302533.6295272/94‑1 (MQ=60)

                   CAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCAC                                                                           <  SRR4302533.4742112/94‑1 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                          <  SRR4302533.5131897/94‑1 (MQ=60)

                    AATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACG                                                                          <  SRR4302533.4233756/94‑1 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                        <  SRR4302533.1980637/94‑1 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                        <  SRR4302533.1150416/94‑1 (MQ=60)

                      TATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGT                                                                        >  SRR4302533.113326/1‑94 (MQ=60)

                       ATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTG                                                                       >  SRR4302533.773838/1‑94 (MQ=60)

                         TCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTT                                                                     <  SRR4302533.238320/94‑1 (MQ=60)

                         TCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTT                                                                     <  SRR4302533.4304464/94‑1 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                    <  SRR4302533.1585998/94‑1 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                    <  SRR4302533.3144203/94‑1 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                    >  SRR4302533.6017176/1‑94 (MQ=60)

                          CAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTT                                                                    <  SRR4302533.1698851/94‑1 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                <  SRR4302533.5058520/94‑1 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                >  SRR4302533.5678137/1‑94 (MQ=60)

                              CAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCAT                                                                >  SRR4302533.3698254/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                               >  SRR4302533.2861269/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                               >  SRR4302533.860450/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                               >  SRR4302533.3883999/1‑94 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATC                                                               <  SRR4302533.2671111/94‑1 (MQ=60)

                               AGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGAGCTTCAACATCACGGTGATTCCATC                                                               >  SRR4302533.956747/1‑94 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                             >  SRR4302533.3759588/1‑94 (MQ=60)

                                 ATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGA                                                             >  SRR4302533.1486307/1‑94 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAA                                                            >  SRR4302533.4637885/1‑94 (MQ=60)

                                  TAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAA                                                            >  SRR4302533.5744726/1‑94 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGTGCTTCAACATCACGGTGTTTCCATCGAAC                                                           <  SRR4302533.3901967/94‑1 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                           >  SRR4302533.5912836/1‑94 (MQ=60)

                                   AGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAAC                                                           >  SRR4302533.3170745/1‑94 (MQ=60)

                                     AGATATAAAAAGCGGCCCACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGTGGTTTCCATCGAAaca                                                         >  SRR4302533.1721533/1‑91 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                       <  SRR4302533.5046372/94‑1 (MQ=60)

                                       ATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAG                                                       >  SRR4302533.1656692/1‑94 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                      <  SRR4302533.502026/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                      <  SRR4302533.5092179/94‑1 (MQ=60)

                                        TATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGT                                                      >  SRR4302533.2439016/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                     >  SRR4302533.1261666/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                     >  SRR4302533.1132217/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                     >  SRR4302533.5338160/1‑94 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                     <  SRR4302533.2688180/94‑1 (MQ=60)

                                         ATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTG                                                     >  SRR4302533.1488501/1‑94 (MQ=60)

                                           AAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCG                                                   <  SRR4302533.1518330/94‑1 (MQ=60)

                                           AAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCG                                                   <  SRR4302533.3578405/94‑1 (MQ=60)

                                            AAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGC                                                  <  SRR4302533.237375/94‑1 (MQ=60)

                                              AAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                <  SRR4302533.2836368/94‑1 (MQ=60)

                                              AAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                <  SRR4302533.1737209/94‑1 (MQ=60)

                                              AAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCAT                                                >  SRR4302533.4394872/1‑94 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                               <  SRR4302533.2789583/94‑1 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                               >  SRR4302533.5950625/1‑94 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                               <  SRR4302533.1224638/94‑1 (MQ=60)

                                               AGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATA                                               <  SRR4302533.1540644/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                              <  SRR4302533.1193454/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                              <  SRR4302533.2550872/94‑1 (MQ=60)

                                                GCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATAT                                              <  SRR4302533.2820682/94‑1 (MQ=60)

                                                 CGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATG                                             >  SRR4302533.4790077/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                            <  SRR4302533.1740996/94‑1 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                            >  SRR4302533.402908/1‑94 (MQ=60)

                                                  GGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGC                                            <  SRR4302533.4739510/94‑1 (MQ=60)

                                                   GCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCT                                           <  SRR4302533.1582747/94‑1 (MQ=60)

                                                    GCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                          <  SRR4302533.174783/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                          <  SRR4302533.144396/94‑1 (MQ=60)

                                                    CCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTC                                          <  SRR4302533.206453/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         >  SRR4302533.4255419/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         <  SRR4302533.5249843/94‑1 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         >  SRR4302533.5847839/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         >  SRR4302533.1038680/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         >  SRR4302533.1108039/1‑94 (MQ=60)

                                                     CAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCG                                         <  SRR4302533.1453023/94‑1 (MQ=60)

                                                      AACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGC                                        <  SRR4302533.953446/94‑1 (MQ=60)

                                                      AACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGC                                        >  SRR4302533.5357559/1‑94 (MQ=60)

                                                      AACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGC                                        >  SRR4302533.1849838/1‑94 (MQ=60)

                                                       ACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCA                                       <  SRR4302533.2095531/94‑1 (MQ=60)

                                                        CAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAA                                      >  SRR4302533.3835436/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                     >  SRR4302533.2075045/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                     >  SRR4302533.5453328/1‑94 (MQ=60)

                                                         AATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAA                                     >  SRR4302533.2668092/1‑94 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                    <  SRR4302533.3669762/94‑1 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                    <  SRR4302533.3351556/94‑1 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                    <  SRR4302533.5762545/94‑1 (MQ=60)

                                                          ATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAG                                    >  SRR4302533.4722535/1‑94 (MQ=60)

                                                           TAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGC                                   >  SRR4302533.956928/1‑94 (MQ=60)

                                                           TAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGC                                   <  SRR4302533.2028704/94‑1 (MQ=60)

                                                            AGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCA                                  <  SRR4302533.3527220/94‑1 (MQ=60)

                                                            AGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCA                                  >  SRR4302533.4305266/1‑94 (MQ=60)

                                                             GCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAA                                 >  SRR4302533.1953854/1‑94 (MQ=60)

                                                              CCAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAA                                >  SRR4302533.4496502/1‑94 (MQ=60)

                                                               CAGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGAAAAA                               <  SRR4302533.6138670/94‑1 (MQ=60)

                                                                AGGCGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAAT                              >  SRR4302533.6071296/1‑94 (MQ=60)

                                                                   CGAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAA                           >  SRR4302533.2253771/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                          <  SRR4302533.2708487/94‑1 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                          >  SRR4302533.6258638/1‑94 (MQ=60)

                                                                    GAGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAG                          <  SRR4302533.1408065/94‑1 (MQ=60)

                                                                     AGTAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGC                         <  SRR4302533.5392140/94‑1 (MQ=60)

                                                                       TAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCA                       <  SRR4302533.504595/94‑1 (MQ=60)

                                                                       TAAATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCA                       <  SRR4302533.4349014/94‑1 (MQ=60)

                                                                         AATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAAC                     >  SRR4302533.920534/1‑94 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                    <  SRR4302533.1440028/94‑1 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                    <  SRR4302533.4094077/94‑1 (MQ=60)

                                                                          ATTCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACC                    <  SRR4302533.3752584/94‑1 (MQ=60)

                                                                            TCAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTT                  >  SRR4302533.3181110/1‑94 (MQ=60)

                                                                             CAAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTA                 >  SRR4302533.2185687/1‑94 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                >  SRR4302533.4871852/1‑94 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                >  SRR4302533.5551279/1‑94 (MQ=60)

                                                                              AAAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGATTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAA                >  SRR4302533.4871683/1‑94 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.3949029/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.3219630/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.5422863/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.5528063/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.4936372/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAG               <  SRR4302533.2527702/94‑1 (MQ=60)

                                                                               AAGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGCGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAT               >  SRR4302533.193949/1‑94 (MQ=60)

                                                                                AGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT              <  SRR4302533.126113/94‑1 (MQ=60)

                                                                                AGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT              >  SRR4302533.2842018/1‑94 (MQ=60)

                                                                                AGAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT              <  SRR4302533.3763904/94‑1 (MQ=60)

                                                                                AGAGAGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGT              <  SRR4302533.2423853/94‑1 (MQ=60)

                                                                                 GAGGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTT             <  SRR4302533.4596918/94‑1 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT           <  SRR4302533.196876/94‑1 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT           <  SRR4302533.2434560/94‑1 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT           <  SRR4302533.2965899/94‑1 (MQ=60)

                                                                                   GGGTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCT           >  SRR4302533.1448921/1‑94 (MQ=60)

                                                                                     GTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTA         <  SRR4302533.3332058/94‑1 (MQ=60)

                                                                                     GTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTA         <  SRR4302533.600362/94‑1 (MQ=60)

                                                                                     GTCTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTA         >  SRR4302533.6183244/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG       >  SRR4302533.867927/1‑94 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG       <  SRR4302533.2192977/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG       <  SRR4302533.2575516/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG       <  SRR4302533.6306066/94‑1 (MQ=60)

                                                                                       CTTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAG       >  SRR4302533.4509721/1‑94 (MQ=60)

                                                                                        TTTTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGG      >  SRR4302533.5386914/1‑94 (MQ=60)

                                                                                        TTTTTGGTAGGCGCTTCAACATCACGGCGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGG      <  SRR4302533.2505933/94‑1 (MQ=60)

                                                                                          TTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTT    >  SRR4302533.1554502/1‑94 (MQ=60)

                                                                                          TTTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTT    <  SRR4302533.5925420/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG   <  SRR4302533.754972/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG   <  SRR4302533.2363903/94‑1 (MQ=60)

                                                                                           TTGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTG   <  SRR4302533.5081870/94‑1 (MQ=60)

                                                                                            TGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGG  <  SRR4302533.2836168/94‑1 (MQ=60)

                                                                                            TGGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGG  >  SRR4302533.2188500/1‑94 (MQ=60)

AACACCTGTTTAAAAAAGGCAATATTCAGGCAGATAGAGATATAAAAAGCGGCCAACAATAGCCAGGCGAGTAAATTCAAAGAGGGTCTTTTTAGTAGGCGCTTCAACATCACGGTGTTTCCATCGAACAAAGTGCGCATATGCTCGCAAAGCAAAATTAAGCCAACCTTAAGTTCTTAAGGTTGG  >  NC_000913/4333059‑4333244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`