Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,381,510	T→C	Y46H (TAC→CAC)	yjeM →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,381,510	0	T	C	99.9%	2265.3 / NA	682	Y46H (TAC→CAC)	yjeM	putative transport
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (294/386); total (294/388)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 707 total aligned reads displayed.

CCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA  >  NC_000913/4381420‑4381599

  tCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACtt                                                                                       >  2:3925231/1‑93 (MQ=255)

   cacaCGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTa                                                                                      >  1:2967470/1‑93 (MQ=255)

    acacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTaa                                                                                     <  1:1536444/93‑1 (MQ=255)

    acacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTaa                                                                                     >  2:682493/1‑93 (MQ=255)

    acacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTaa                                                                                     <  2:4605862/93‑1 (MQ=255)

    acacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTaa                                                                                     <  2:1067802/93‑1 (MQ=255)

    acacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTaa                                                                                     <  1:3066595/93‑1 (MQ=255)

     cacGATATAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAt                                                                                    >  2:8541818/1‑93 (MQ=255)

     cacGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAt                                                                                    <  2:9760900/93‑1 (MQ=255)

      acGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATg                                                                                   <  1:1156538/93‑1 (MQ=255)

      acGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATg                                                                                   <  2:9658477/93‑1 (MQ=255)

      acGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATg                                                                                   <  1:5847905/93‑1 (MQ=255)

           aaaaaaGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTta                                                                              <  1:8469776/93‑1 (MQ=255)

            aaaaaGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTtat                                                                             <  1:9013958/93‑1 (MQ=255)

              aaaGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAg                                                                           >  2:4769420/1‑93 (MQ=255)

               aaGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGt                                                                          >  1:9330969/1‑93 (MQ=255)

               aaGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGt                                                                          >  2:577722/1‑93 (MQ=255)

                aGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTg                                                                         <  2:2993758/93‑1 (MQ=255)

                 gATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGc                                                                        >  2:1812298/1‑93 (MQ=255)

                 gATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGGTATAGTgt                                                                        >  2:7709661/1‑92 (MQ=255)

                   tGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGa                                                                      <  1:6419531/93‑1 (MQ=255)

                   tGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGa                                                                      >  1:5141864/1‑93 (MQ=255)

                    gAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTGTCACTTAATGGGTTATAGTGCggt                                                                     >  2:7390319/1‑91 (MQ=255)

                      gTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTc                                                                   <  1:4773034/93‑1 (MQ=255)

                       tCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTcc                                                                  <  2:7170523/93‑1 (MQ=255)

                         tGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCt                                                                <  2:6612290/93‑1 (MQ=255)

                         tGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCt                                                                <  2:5120390/93‑1 (MQ=255)

                         tGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCt                                                                >  1:6064823/1‑93 (MQ=255)

                          gATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCtt                                                               >  2:3139613/1‑93 (MQ=255)

                           aTAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGGTATAGTGCGATTCCCttt                                                              >  2:7970395/1‑93 (MQ=255)

                            tAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCtttt                                                             <  2:7904788/93‑1 (MQ=255)

                            tAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCtttt                                                             <  1:3294138/93‑1 (MQ=255)

                             aGGAGTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTta                                                            <  2:1668057/93‑1 (MQ=255)

                              ggACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTtat                                                           <  2:5460193/93‑1 (MQ=255)

                              ggACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTtat                                                           <  2:4296523/93‑1 (MQ=255)

                                 cTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTtatata                                                        <  2:8187719/93‑1 (MQ=255)

                                  tCATATTGATGATGTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTatatat                                                       >  1:6719362/1‑93 (MQ=255)

                                  tCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTatatat                                                       >  1:7743824/1‑93 (MQ=255)

                                  tCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTatatat                                                       >  2:9454771/1‑93 (MQ=255)

                                  tCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTatatat                                                       >  2:2572405/1‑93 (MQ=255)

                                   cATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAtt                                                      <  1:2381993/93‑1 (MQ=255)

                                   cATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAtt                                                      >  1:2071518/1‑93 (MQ=255)

                                    atatTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAttt                                                     >  2:8843512/1‑93 (MQ=255)

                                    atatTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAttt                                                     <  1:617610/93‑1 (MQ=255)

                                     tatTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAtttt                                                    >  2:7527351/1‑93 (MQ=255)

                                     tatTGATGATCTTTACTTCCGTATCTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAtttt                                                    >  2:6361930/1‑93 (MQ=255)

                                       ttGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCt                                                  >  2:5862949/1‑93 (MQ=255)

                                       ttGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCt                                                  >  1:6866444/1‑93 (MQ=255)

                                        tgatgaTCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTg                                                 >  2:2731709/1‑93 (MQ=255)

                                          atgatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCa                                               >  2:8297204/1‑93 (MQ=255)

                                           tgatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCAt                                              >  1:4494541/1‑93 (MQ=255)

                                            gatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCAtt                                             <  1:5376902/93‑1 (MQ=255)

                                            gatCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCAtt                                             <  1:2727818/93‑1 (MQ=255)

                                             atCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTg                                            >  2:351823/1‑93 (MQ=255)

                                              tCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGt                                           <  2:409768/93‑1 (MQ=255)

                                              tCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGt                                           >  1:7392306/1‑93 (MQ=255)

                                                tttACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTa                                         <  1:9424398/93‑1 (MQ=255)

                                                 ttACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAt                                        >  2:9284001/1‑93 (MQ=255)

                                                 ttACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAt                                        <  2:9080732/93‑1 (MQ=255)

                                                 ttACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAt                                        >  1:3658608/1‑93 (MQ=255)

                                                  tACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAtt                                       >  1:8215933/1‑93 (MQ=255)

                                                   aCTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTc                                      <  2:4482186/93‑1 (MQ=255)

                                                   aCTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGATTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTc                                      <  1:9893261/93‑1 (MQ=255)

                                                    cTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCt                                     >  2:2083513/1‑93 (MQ=255)

                                                      tCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCttt                                   <  2:3680299/93‑1 (MQ=255)

                                                       ccGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTa                                  <  1:43295/93‑1 (MQ=255)

                                                        cGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAt                                 <  1:3846622/93‑1 (MQ=255)

                                                        cGTATTTGGATGTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAt                                 <  1:1416285/93‑1 (MQ=255)

                                                          tATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTc                               >  2:3339588/1‑93 (MQ=255)

                                                          tATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTc                               <  2:7014719/93‑1 (MQ=255)

                                                          tATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTc                               <  2:6120727/93‑1 (MQ=255)

                                                          tATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTc                               >  2:1328715/1‑93 (MQ=255)

                                                           aTTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTcc                              <  1:9142787/93‑1 (MQ=255)

                                                           aTTTGGATATGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTcc                              <  2:8954151/93‑1 (MQ=255)

                                                            tttGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCa                             >  2:5617267/1‑93 (MQ=255)

                                                            tttGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCa                             >  2:1558025/1‑93 (MQ=255)

                                                              tGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCAtt                           <  1:6986299/93‑1 (MQ=255)

                                                               ggATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTc                          <  2:5314984/93‑1 (MQ=255)

                                                               ggATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTc                          >  1:5601262/1‑93 (MQ=255)

                                                                   ttGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCt                      <  1:1702547/93‑1 (MQ=255)

                                                                     gCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTa                    >  2:123156/1‑93 (MQ=255)

                                                                       cAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAat                  >  2:2432708/1‑93 (MQ=255)

                                                                       cAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAat                  <  1:4963133/93‑1 (MQ=255)

                                                                        aaTAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAatg                 >  1:3187764/1‑93 (MQ=255)

                                                                        aaTAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAatg                 <  1:3489701/93‑1 (MQ=255)

                                                                         aTAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAatga                <  1:4021881/93‑1 (MQ=255)

                                                                           aGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAatgatg              <  1:8787261/93‑1 (MQ=255)

                                                                            gCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATgg             >  1:7219997/1‑93 (MQ=255)

                                                                             cccATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGc            <  1:1886008/93‑1 (MQ=255)

                                                                              ccATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCt           <  1:10000185/93‑1 (MQ=255)

                                                                               cATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTg          >  1:4683544/1‑93 (MQ=255)

                                                                               cATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTg          >  2:8028434/1‑93 (MQ=255)

                                                                                aTCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGa         <  1:8002902/93‑1 (MQ=255)

                                                                                aTCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGa         <  1:9695541/93‑1 (MQ=255)

                                                                                 tCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGaa        >  1:2580336/1‑93 (MQ=255)

                                                                                   ggCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAAt      >  1:7934447/1‑93 (MQ=255)

                                                                                    gCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATg     >  2:9578225/1‑93 (MQ=255)

                                                                                    gCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATg     <  2:2247324/93‑1 (MQ=255)

                                                                                       tatcaCTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGa  >  1:9547815/1‑93 (MQ=255)

                                                                                       tatcaCTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGa  >  2:4997110/1‑93 (MQ=255)

CCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA  >  NC_000913/4381420‑4381599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 362 total aligned reads displayed.

ATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTG  >  NC_000913/4381417‑4381603

ATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATC                                                                                               <  SRR4302540.2505900/94‑1 (MQ=60)

 TGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCA                                                                                              <  SRR4302540.6338292/94‑1 (MQ=60)

 TGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCA                                                                                              <  SRR4302540.4178439/94‑1 (MQ=60)

 TGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCA                                                                                              >  SRR4302540.4314032/1‑94 (MQ=60)

 TGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCA                                                                                              >  SRR4302540.1470707/1‑94 (MQ=60)

  GCCTCACACGATAAAAAAGATGAGTCTGATATGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCAC                                                                                             <  SRR4302540.877907/94‑1 (MQ=60)

  GCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCAC                                                                                             <  SRR4302540.8895794/94‑1 (MQ=60)

  GCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCAC                                                                                             <  SRR4302540.5715800/94‑1 (MQ=60)

   CCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACT                                                                                            <  SRR4302540.2309721/94‑1 (MQ=60)

   CCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACT                                                                                            <  SRR4302540.1018222/94‑1 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           >  SRR4302540.8950941/1‑94 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           >  SRR4302540.7043183/1‑94 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           >  SRR4302540.6721898/1‑94 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           >  SRR4302540.3807834/1‑94 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           <  SRR4302540.1083906/94‑1 (MQ=60)

    CTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTT                                                                                           >  SRR4302540.6219451/1‑94 (MQ=60)

     TCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTA                                                                                          >  SRR4302540.482536/1‑94 (MQ=60)

     TCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTA                                                                                          >  SRR4302540.3000237/1‑94 (MQ=60)

      CACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAA                                                                                         >  SRR4302540.5901286/1‑94 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        <  SRR4302540.1553437/94‑1 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        >  SRR4302540.6962893/1‑94 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        <  SRR4302540.3100239/94‑1 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        <  SRR4302540.184641/94‑1 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        <  SRR4302540.2655160/94‑1 (MQ=60)

       ACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAAT                                                                                        >  SRR4302540.236584/1‑94 (MQ=60)

        CACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATG                                                                                       <  SRR4302540.3048571/94‑1 (MQ=60)

         ACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGG                                                                                      >  SRR4302540.9305396/1‑94 (MQ=60)

           GATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGT                                                                                    <  SRR4302540.6987967/94‑1 (MQ=60)

           GATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGT                                                                                    <  SRR4302540.3030559/94‑1 (MQ=60)

            ATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTT                                                                                   <  SRR4302540.1667247/94‑1 (MQ=60)

              AAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTAT                                                                                 <  SRR4302540.463727/94‑1 (MQ=60)

              AAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTAT                                                                                 <  SRR4302540.8568129/94‑1 (MQ=60)

              AAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTAT                                                                                 <  SRR4302540.9584652/94‑1 (MQ=60)

               AAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATA                                                                                >  SRR4302540.5240902/1‑94 (MQ=60)

               AAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATA                                                                                <  SRR4302540.9122105/94‑1 (MQ=60)

               AAAAAGATGAGGCTGATAGGGCTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATA                                                                                <  SRR4302540.5986389/94‑1 (MQ=60)

                AAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAG                                                                               >  SRR4302540.5292474/1‑94 (MQ=60)

                AAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAG                                                                               >  SRR4302540.6362844/1‑94 (MQ=60)

                AAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAG                                                                               <  SRR4302540.1589725/94‑1 (MQ=60)

                 AAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGT                                                                              <  SRR4302540.2479910/94‑1 (MQ=60)

                 AAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGT                                                                              >  SRR4302540.9442226/1‑94 (MQ=60)

                 AAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGT                                                                              <  SRR4302540.1423271/94‑1 (MQ=60)

                  AAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTG                                                                             <  SRR4302540.3249374/94‑1 (MQ=60)

                   AGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGG                                                                            >  SRR4302540.73354/1‑94 (MQ=60)

                   AGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGC                                                                            >  SRR4302540.2241277/1‑94 (MQ=60)

                   AGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGC                                                                            <  SRR4302540.361068/94‑1 (MQ=60)

                   AGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGC                                                                            <  SRR4302540.204433/94‑1 (MQ=60)

                   AGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGC                                                                            >  SRR4302540.2641697/1‑94 (MQ=60)

                    GATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCG                                                                           >  SRR4302540.5422512/1‑94 (MQ=60)

                     ATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGA                                                                          <  SRR4302540.4819308/94‑1 (MQ=60)

                     ATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGA                                                                          >  SRR4302540.6833747/1‑94 (MQ=60)

                      TGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGAT                                                                         <  SRR4302540.4014469/94‑1 (MQ=60)

                      TGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGAT                                                                         <  SRR4302540.6490981/94‑1 (MQ=60)

                       GAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATT                                                                        <  SRR4302540.8218813/94‑1 (MQ=60)

                        AGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTC                                                                       >  SRR4302540.1186065/1‑94 (MQ=60)

                         GTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCC                                                                      >  SRR4302540.5864445/1‑94 (MQ=60)

                         GTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGAGATTCC                                                                      >  SRR4302540.356846/1‑94 (MQ=60)

                           CTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCT                                                                    >  SRR4302540.299125/1‑94 (MQ=60)

                           CTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCT                                                                    >  SRR4302540.1682216/1‑94 (MQ=60)

                           CTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCT                                                                    >  SRR4302540.2191576/1‑94 (MQ=60)

                           CTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCT                                                                    <  SRR4302540.6267610/94‑1 (MQ=60)

                            TGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTT                                                                   <  SRR4302540.446333/94‑1 (MQ=60)

                            TGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTT                                                                   >  SRR4302540.9929264/1‑94 (MQ=60)

                              ATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTT                                                                 >  SRR4302540.8091795/1‑94 (MQ=60)

                              ATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTT                                                                 >  SRR4302540.793456/1‑94 (MQ=60)

                               TAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTA                                                                <  SRR4302540.4963712/94‑1 (MQ=60)

                               TAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTA                                                                <  SRR4302540.3330183/94‑1 (MQ=60)

                               TAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTA                                                                <  SRR4302540.9827458/94‑1 (MQ=60)

                               TAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTA                                                                <  SRR4302540.3214581/94‑1 (MQ=60)

                                AGGACTCATATTTATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTAT                                                               <  SRR4302540.1857717/94‑1 (MQ=60)

                                AGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTAT                                                               <  SRR4302540.7932770/94‑1 (MQ=60)

                                 GGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATA                                                              <  SRR4302540.9630680/94‑1 (MQ=60)

                                 GGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATA                                                              <  SRR4302540.7649408/94‑1 (MQ=60)

                                 GGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATA                                                              >  SRR4302540.7108248/1‑94 (MQ=60)

                                 GGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATA                                                              <  SRR4302540.3225544/94‑1 (MQ=60)

                                 GGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATA                                                              <  SRR4302540.4552549/94‑1 (MQ=60)

                                  GACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATAT                                                             <  SRR4302540.5198321/94‑1 (MQ=60)

                                   ACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATA                                                            <  SRR4302540.183530/94‑1 (MQ=60)

                                    CTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAT                                                           <  SRR4302540.6833325/94‑1 (MQ=60)

                                    CTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAT                                                           >  SRR4302540.7834240/1‑94 (MQ=60)

                                    CTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAT                                                           >  SRR4302540.9332177/1‑94 (MQ=60)

                                    CTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATAT                                                           >  SRR4302540.7733814/1‑94 (MQ=60)

                                     TCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATT                                                          <  SRR4302540.8879919/94‑1 (MQ=60)

                                      CATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTT                                                         <  SRR4302540.2407657/94‑1 (MQ=60)

                                       ATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTT                                                        <  SRR4302540.624194/94‑1 (MQ=60)

                                       ATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTT                                                        >  SRR4302540.2084417/1‑94 (MQ=60)

                                       ATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTT                                                        >  SRR4302540.4790766/1‑94 (MQ=60)

                                       ATAATGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTT                                                        <  SRR4302540.975142/94‑1 (MQ=60)

                                        TATTGATGATCTTTACTTCCGTATTTGGATTTCCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTC                                                       >  SRR4302540.8058492/1‑94 (MQ=60)

                                         ATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCT                                                      <  SRR4302540.3073509/94‑1 (MQ=60)

                                         ATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCT                                                      <  SRR4302540.9445974/94‑1 (MQ=60)

                                         ATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCT                                                      >  SRR4302540.6942556/1‑94 (MQ=60)

                                         ATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCT                                                      <  SRR4302540.8168013/94‑1 (MQ=60)

                                          TTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTCTATATTTTCTG                                                     >  SRR4302540.3422666/1‑94 (MQ=60)

                                           TGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGC                                                    >  SRR4302540.3760276/1‑94 (MQ=60)

                                             ATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCAT                                                  >  SRR4302540.4778515/1‑94 (MQ=60)

                                             ATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCAT                                                  >  SRR4302540.3174276/1‑94 (MQ=60)

                                              TGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATT                                                 >  SRR4302540.5578004/1‑94 (MQ=60)

                                               GATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTG                                                <  SRR4302540.2757238/94‑1 (MQ=60)

                                               GATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTG                                                <  SRR4302540.3512176/94‑1 (MQ=60)

                                               GATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTG                                                <  SRR4302540.5436033/94‑1 (MQ=60)

                                                ATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGT                                               <  SRR4302540.2762553/94‑1 (MQ=60)

                                                ATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGT                                               >  SRR4302540.7474677/1‑94 (MQ=60)

                                                ATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGT                                               >  SRR4302540.2691873/1‑94 (MQ=60)

                                                ATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGT                                               <  SRR4302540.684950/94‑1 (MQ=60)

                                                 TCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTT                                              <  SRR4302540.4834492/94‑1 (MQ=60)

                                                 TCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTT                                              <  SRR4302540.2449067/94‑1 (MQ=60)

                                                   TTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAT                                            <  SRR4302540.6566220/94‑1 (MQ=60)

                                                   TTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAT                                            <  SRR4302540.1310526/94‑1 (MQ=60)

                                                   TTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTAT                                            <  SRR4302540.9536388/94‑1 (MQ=60)

                                                    TTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATT                                           >  SRR4302540.8311426/1‑94 (MQ=60)

                                                    TTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATT                                           <  SRR4302540.3562925/94‑1 (MQ=60)

                                                      ACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCT                                         <  SRR4302540.4998741/94‑1 (MQ=60)

                                                      ACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGATTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCT                                         <  SRR4302540.10008787/94‑1 (MQ=60)

                                                       CTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTT                                        <  SRR4302540.9757012/94‑1 (MQ=60)

                                                       CTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTT                                        >  SRR4302540.6331897/1‑94 (MQ=60)

                                                       CTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTT                                        <  SRR4302540.9207576/94‑1 (MQ=60)

                                                        TTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTT                                       >  SRR4302540.927120/1‑94 (MQ=60)

                                                         TCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTA                                      <  SRR4302540.71120/94‑1 (MQ=60)

                                                          ttattaagtGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAT                                     <  SRR4302540.9958160/85‑1 (MQ=60)

                                                          CCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAT                                     <  SRR4302540.609129/94‑1 (MQ=60)

                                                          CCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAT                                     <  SRR4302540.43740/94‑1 (MQ=60)

                                                          CCGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTAT                                     >  SRR4302540.4329534/1‑94 (MQ=60)

                                                           CGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    <  SRR4302540.617592/94‑1 (MQ=60)

                                                           CGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    <  SRR4302540.1699670/94‑1 (MQ=60)

                                                           CGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    <  SRR4302540.4617167/94‑1 (MQ=60)

                                                           CGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    <  SRR4302540.3888453/94‑1 (MQ=60)

                                                           CGTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    >  SRR4302540.3705224/1‑94 (MQ=60)

                                                           CGTATTTGGATGTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATT                                    <  SRR4302540.1431574/94‑1 (MQ=60)

                                                            GTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTC                                   >  SRR4302540.3620104/1‑94 (MQ=60)

                                                            GTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTC                                   >  SRR4302540.7393025/1‑94 (MQ=60)

                                                            GTATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTC                                   <  SRR4302540.9075249/94‑1 (MQ=60)

                                                              ATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCA                                 <  SRR4302540.5064761/94‑1 (MQ=60)

                                                              ATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCA                                 >  SRR4302540.7867776/1‑94 (MQ=60)

                                                              ATTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCA                                 <  SRR4302540.9252619/94‑1 (MQ=60)

                                                               TTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCAT                                <  SRR4302540.3207363/94‑1 (MQ=60)

                                                               TTTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCAT                                <  SRR4302540.2086258/94‑1 (MQ=60)

                                                                TTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATT                               <  SRR4302540.5104405/94‑1 (MQ=60)

                                                                TTGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATT                               <  SRR4302540.651318/94‑1 (MQ=60)

                                                                 TGGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTC                              >  SRR4302540.5662891/1‑94 (MQ=60)

                                                                  GGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCG                             <  SRR4302540.1002220/94‑1 (MQ=60)

                                                                  GGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCG                             >  SRR4302540.4394152/1‑94 (MQ=60)

                                                                  GGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCG                             >  SRR4302540.6462849/1‑94 (MQ=60)

                                                                  GGATTTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCG                             <  SRR4302540.4738621/94‑1 (MQ=60)

                                                                      TTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTT                         <  SRR4302540.1720974/94‑1 (MQ=60)

                                                                      TTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTT                         <  SRR4302540.9471730/94‑1 (MQ=60)

                                                                      TTGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTT                         <  SRR4302540.10139218/94‑1 (MQ=60)

                                                                       TGCCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTA                        <  SRR4302540.2712405/94‑1 (MQ=60)

                                                                         CCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAAT                      <  SRR4302540.8506002/94‑1 (MQ=60)

                                                                         CCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAAT                      >  SRR4302540.8408699/1‑94 (MQ=60)

                                                                         CCAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAAT                      <  SRR4302540.5459851/94‑1 (MQ=60)

                                                                          CAATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATG                     >  SRR4302540.3222398/1‑94 (MQ=60)

                                                                           AATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGA                    <  SRR4302540.5913898/94‑1 (MQ=60)

                                                                           AATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGA                    <  SRR4302540.3527706/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.866514/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.8246579/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.3318758/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.560796/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   >  SRR4302540.503825/1‑94 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.2881423/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   >  SRR4302540.9003396/1‑94 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.4065226/94‑1 (MQ=60)

                                                                            ATAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGAT                   <  SRR4302540.9180145/94‑1 (MQ=60)

                                                                             TAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATG                  <  SRR4302540.1083180/94‑1 (MQ=60)

                                                                             TAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATG                  <  SRR4302540.4025632/94‑1 (MQ=60)

                                                                             TAGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATG                  <  SRR4302540.8551440/94‑1 (MQ=60)

                                                                              AGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGG                 <  SRR4302540.2520999/94‑1 (MQ=60)

                                                                              AGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGG                 >  SRR4302540.7300471/1‑94 (MQ=60)

                                                                              AGCCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGG                 <  SRR4302540.3963474/94‑1 (MQ=60)

                                                                                CCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCT               <  SRR4302540.9486603/94‑1 (MQ=60)

                                                                                CCCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCT               <  SRR4302540.1906657/94‑1 (MQ=60)

                                                                                 CCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTG              >  SRR4302540.9696979/1‑94 (MQ=60)

                                                                                 CCATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTG              <  SRR4302540.10116689/94‑1 (MQ=60)

                                                                                  CATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGA             >  SRR4302540.4421497/1‑94 (MQ=60)

                                                                                   ATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAA            >  SRR4302540.3758456/1‑94 (MQ=60)

                                                                                   ATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAA            <  SRR4302540.9809553/94‑1 (MQ=60)

                                                                                   ATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAA            >  SRR4302540.4228104/1‑94 (MQ=60)

                                                                                   ATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAA            >  SRR4302540.6989177/1‑94 (MQ=60)

                                                                                   ATCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAA            >  SRR4302540.9160106/1‑94 (MQ=60)

                                                                                    TCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAA           >  SRR4302540.5186413/1‑94 (MQ=60)

                                                                                    TCGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAA           <  SRR4302540.4696498/94‑1 (MQ=60)

                                                                                     CGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAAT          <  SRR4302540.1491034/94‑1 (MQ=60)

                                                                                     CGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAAT          >  SRR4302540.7176867/1‑94 (MQ=60)

                                                                                     CGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAAT          <  SRR4302540.8695488/94‑1 (MQ=60)

                                                                                     CGGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAAT          >  SRR4302540.8026925/1‑94 (MQ=60)

                                                                                      GGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATG         <  SRR4302540.6147602/94‑1 (MQ=60)

                                                                                      GGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATG         <  SRR4302540.7560463/94‑1 (MQ=60)

                                                                                      GGCTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATG         >  SRR4302540.8043958/1‑94 (MQ=60)

                                                                                       GCTTATCTCTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGG        <  SRR4302540.7364971/94‑1 (MQ=60)

                                                                                        CTTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGG       >  SRR4302540.5934796/1‑94 (MQ=60)

                                                                                         TTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA      >  SRR4302540.9660767/1‑94 (MQ=60)

                                                                                         TTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA      <  SRR4302540.8082216/94‑1 (MQ=60)

                                                                                         TTATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA      >  SRR4302540.1464701/1‑94 (MQ=60)

                                                                                         TTATCACTTAATGGGTTATAGTGCGATTCCATTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGA      <  SRR4302540.9622553/94‑1 (MQ=60)

                                                                                          TATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAG     >  SRR4302540.5799106/1‑94 (MQ=60)

                                                                                          TATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAG     >  SRR4302540.5799104/1‑94 (MQ=60)

                                                                                           ATCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGC    <  SRR4302540.345788/94‑1 (MQ=60)

                                                                                            TCACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCT   >  SRR4302540.1247365/1‑94 (MQ=60)

                                                                                            TCACTGAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCT   <  SRR4302540.8588778/94‑1 (MQ=60)

                                                                                             CACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTG  <  SRR4302540.2147647/94‑1 (MQ=60)

ATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTG  >  NC_000913/4381417‑4381603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`