Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,472,408 A→G intergenic (+117/‑28) b4251 → / → b4252 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,472,4080AG99.9% 2269.4 / NA 690intergenic (+117/‑28)b4251/b4252hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (338/351);  total (339/351)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 702 total aligned reads displayed.

AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472318‑4472497
                                                                                          |                                                                                         
aaGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCg                                                                                         <  1:4232550/93‑1 (MQ=255)
aaGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCg                                                                                         <  2:1329868/93‑1 (MQ=255)
  gcgcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgtt                                                                                       >  1:9237664/1‑93 (MQ=255)
    cccTGCCGATAAGTTGTGATGAGACAATAATTCACGCGTTAAGGCTAGCGGAATGGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgt                                                                                     <  2:7770706/92‑1 (MQ=255)
     ccTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgtt                                                                                    <  1:3988927/93‑1 (MQ=255)
      cTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGttt                                                                                   >  1:9711251/1‑93 (MQ=255)
       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  <  2:3888178/93‑1 (MQ=255)
       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  1:2479231/1‑93 (MQ=255)
       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  2:9133873/1‑93 (MQ=255)
       tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  2:8551142/1‑93 (MQ=255)
        gCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTtta                                                                                 >  1:5935049/1‑93 (MQ=255)
          cGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaat                                                                               >  1:7063819/1‑93 (MQ=255)
            aTAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatta                                                                             <  2:411211/93‑1 (MQ=255)
            aTAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatta                                                                             >  2:7436716/1‑93 (MQ=255)
             tAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaattaa                                                                            <  1:1261060/93‑1 (MQ=255)
               aGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAgg                                                                          <  2:4979139/93‑1 (MQ=255)
               aGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAgg                                                                          >  1:9647283/1‑93 (MQ=255)
               aGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAgg                                                                          >  2:3062314/1‑93 (MQ=255)
                gTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         <  1:3426621/93‑1 (MQ=255)
                gTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         <  1:9069708/93‑1 (MQ=255)
                  tgtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       <  1:5227338/93‑1 (MQ=255)
                     gATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGa                                                                    >  2:3637778/1‑93 (MQ=255)
                       tAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGaaa                                                                  >  2:1708306/1‑93 (MQ=255)
                       tAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGaaa                                                                  >  1:2052162/1‑93 (MQ=255)
                         aGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAg                                                                >  1:8864475/1‑93 (MQ=255)
                         aGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAg                                                                >  2:6588639/1‑93 (MQ=255)
                            cAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatg                                                             <  2:6774567/93‑1 (MQ=255)
                             aataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatga                                                            >  1:9922492/1‑93 (MQ=255)
                              ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           <  2:8729206/93‑1 (MQ=255)
                              ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           <  1:6820296/93‑1 (MQ=255)
                               taatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          >  1:9849858/1‑93 (MQ=255)
                               taatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          <  1:8126671/93‑1 (MQ=255)
                                aatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatca                                                         <  1:4692210/93‑1 (MQ=255)
                                 atTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcat                                                        <  2:2692980/93‑1 (MQ=255)
                                 atTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcat                                                        <  1:8471636/93‑1 (MQ=255)
                                 atTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcat                                                        <  2:2121318/93‑1 (MQ=255)
                                  ttCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc                                                       <  2:7213281/93‑1 (MQ=255)
                                  ttCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcatc                                                       >  2:6886063/1‑93 (MQ=255)
                                   tCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCg                                                      <  1:6104075/93‑1 (MQ=255)
                                    cACGCGTTAATGCTAGCGGAATTGATTATCTGTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCgg                                                     <  1:1751142/93‑1 (MQ=255)
                                     aCGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGa                                                    <  1:3280359/93‑1 (MQ=255)
                                       gcgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaaa                                                  <  2:1178727/93‑1 (MQ=255)
                                       gcgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaaa                                                  <  1:6368361/93‑1 (MQ=255)
                                       gcgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaaa                                                  <  2:3251022/93‑1 (MQ=255)
                                        cgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaact                                                 >  1:8636473/1‑91 (MQ=255)
                                        cgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAat                                                 >  2:1951896/1‑93 (MQ=255)
                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               >  2:2819013/1‑93 (MQ=255)
                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               >  1:7609208/1‑93 (MQ=255)
                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               <  2:3785495/93‑1 (MQ=255)
                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               >  2:4444155/1‑93 (MQ=255)
                                          ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               <  2:9451975/93‑1 (MQ=255)
                                            aaGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTc                                             <  1:10005519/93‑1 (MQ=255)
                                            aaGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTc                                             >  1:2917602/1‑93 (MQ=255)
                                             aGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa                                            >  2:5765879/1‑93 (MQ=255)
                                             aGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa                                            <  1:435382/93‑1 (MQ=255)
                                             aGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCa                                            >  1:2721128/1‑93 (MQ=255)
                                               gCTAGCGGAATTGATTATCTTTTCGGATAACGATAGAAATGAAGCGTTGTTTTCATTAAGTAGTGGAAAAGATGATCATCGGAAATATTCATa                                          <  2:4297129/93‑1 (MQ=255)
                                                cTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATaa                                         <  1:9357964/93‑1 (MQ=255)
                                                cTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATaa                                         <  2:5138174/93‑1 (MQ=255)
                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        <  1:7430717/93‑1 (MQ=255)
                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        >  1:5577488/1‑93 (MQ=255)
                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        <  1:5366378/93‑1 (MQ=255)
                                                 tAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAt                                        >  1:2300842/1‑93 (MQ=255)
                                                   gCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCt                                      >  2:8391309/1‑93 (MQ=255)
                                                    cGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCtt                                     <  1:1105282/93‑1 (MQ=255)
                                                    cGGAATTGATTATCTTGTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCtt                                     >  2:9557343/1‑93 (MQ=255)
                                                     ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    >  1:4117891/1‑93 (MQ=255)
                                                     ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    <  2:5370700/93‑1 (MQ=255)
                                                      gAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTCAGGAGTGGAAAAGACGATCATCGGAAATATTCATAATCTTCa                                   >  1:4928174/1‑93 (MQ=255)
                                                      gAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCa                                   <  1:3651134/93‑1 (MQ=255)
                                                      gAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCa                                   >  1:3851650/1‑93 (MQ=255)
                                                        aTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGc                                 >  1:8277878/1‑93 (MQ=255)
                                                        aTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGc                                 <  2:4711531/93‑1 (MQ=255)
                                                        aTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGc                                 <  2:5600897/93‑1 (MQ=255)
                                                          tGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCg                               >  1:7929799/1‑93 (MQ=255)
                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  1:2623978/1‑93 (MQ=255)
                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  1:6919838/1‑93 (MQ=255)
                                                           gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              <  2:2397442/93‑1 (MQ=255)
                                                             ttATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTgg                            <  1:6524151/93‑1 (MQ=255)
                                                              tATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc                           <  2:64610/93‑1 (MQ=255)
                                                              tATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc                           <  2:7684519/93‑1 (MQ=255)
                                                              tATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc                           <  2:5249902/93‑1 (MQ=255)
                                                              tATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc                           <  2:1013108/93‑1 (MQ=255)
                                                               aTCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCt                          <  2:4541617/93‑1 (MQ=255)
                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       <  1:1641742/93‑1 (MQ=255)
                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  2:1542294/1‑93 (MQ=255)
                                                                  ttttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAcc                       >  1:3106323/1‑93 (MQ=255)
                                                                   tttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAccc                      >  1:1401173/1‑93 (MQ=255)
                                                                      cGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAg                   <  2:6051752/93‑1 (MQ=255)
                                                                       gTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAgg                  >  1:6638711/1‑93 (MQ=255)
                                                                        tataACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGa                 <  1:7191845/93‑1 (MQ=255)
                                                                              gATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACg           >  2:3435975/1‑93 (MQ=255)
                                                                                aaGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGcc         <  2:7588681/92‑1 (MQ=255)
                                                                                 aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  1:5687739/93‑1 (MQ=255)
                                                                                  gAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAg       <  1:7801979/93‑1 (MQ=255)
                                                                                   aaaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAgg      <  1:4827817/93‑1 (MQ=255)
                                                                                    aaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGc     <  2:89217/93‑1 (MQ=255)
                                                                                    aaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGc     <  1:5057976/93‑1 (MQ=255)
                                                                                      tGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGa   >  2:8062359/1‑93 (MQ=255)
                                                                                       gAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAt  <  2:8252722/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472318‑4472497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 393 total aligned reads displayed.
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501
                                                                                             |                                                                                             
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAG                                                                                               <  SRR4302540.7372194/94‑1 (MQ=60)
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAG                                                                                               >  SRR4302540.1515960/1‑94 (MQ=60)
 GAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGC                                                                                              <  SRR4302540.1810740/94‑1 (MQ=60)
 GAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGC                                                                                              <  SRR4302540.6109314/94‑1 (MQ=60)
  AAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             <  SRR4302540.8475277/94‑1 (MQ=60)
   AAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGT                                                                                            <  SRR4302540.3722616/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           <  SRR4302540.9371518/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           <  SRR4302540.7232426/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302540.8599726/1‑94 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302540.9348332/1‑94 (MQ=60)
      CGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGT                                                                                         <  SRR4302540.9220502/94‑1 (MQ=60)
       GCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGCAGCGTTGTT                                                                                        >  SRR4302540.4932633/1‑94 (MQ=60)
       GCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTT                                                                                        >  SRR4302540.1352780/1‑94 (MQ=60)
       GCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTT                                                                                        >  SRR4302540.1352782/1‑94 (MQ=60)
        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302540.4154352/1‑94 (MQ=60)
        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       <  SRR4302540.2326813/94‑1 (MQ=60)
        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302540.9944972/1‑94 (MQ=60)
        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302540.9825382/1‑94 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      <  SRR4302540.9123294/94‑1 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302540.2698177/1‑94 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      <  SRR4302540.5205002/94‑1 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302540.10077580/1‑94 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTACCTTTTCGTACAACGATAGAAGTGAAGGGTTGTTTT                                                                                      >  SRR4302540.5893416/1‑94 (MQ=60)
          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     >  SRR4302540.4331132/1‑94 (MQ=60)
          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     <  SRR4302540.68344/94‑1 (MQ=60)
          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     <  SRR4302540.6994879/94‑1 (MQ=60)
          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     >  SRR4302540.6000652/1‑94 (MQ=60)
           GCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAA                                                                                    >  SRR4302540.7247193/1‑94 (MQ=60)
           GCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAA                                                                                    <  SRR4302540.3604379/94‑1 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302540.7972583/1‑94 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302540.7142381/1‑94 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302540.5772020/94‑1 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302540.5377934/1‑94 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302540.514914/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302540.6089858/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302540.6673273/1‑94 (MQ=60)
              GATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTA                                                                                 >  SRR4302540.6523426/1‑94 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGCAATGAAGCGTTGTTTTAATTAA                                                                                >  SRR4302540.2414747/1‑94 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302540.417358/94‑1 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302540.294952/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302540.3566677/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302540.9974970/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302540.8064979/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302540.1273996/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302540.1229100/94‑1 (MQ=60)
                 AAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGG                                                                              <  SRR4302540.2950440/94‑1 (MQ=60)
                 AAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGG                                                                              >  SRR4302540.587233/1‑94 (MQ=60)
                 AAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGG                                                                              <  SRR4302540.8384299/94‑1 (MQ=60)
                 AAGTTGTGAGAAGACAATAATTCACGCGGTAAGGCTAGCGGAATTGATTAGCTTTTCGTATAACGATAGAAATAAAGCGTTGTTTTAATTAAGG                                                                              <  SRR4302540.6494043/94‑1 (MQ=60)
                  AGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGA                                                                             <  SRR4302540.9980047/94‑1 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            <  SRR4302540.4928052/94‑1 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            >  SRR4302540.9890583/1‑94 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            <  SRR4302540.9489130/94‑1 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            <  SRR4302540.9246853/94‑1 (MQ=60)
                    TTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGT                                                                           <  SRR4302540.4507699/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302540.5284343/94‑1 (MQ=60)
                      GTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGG                                                                         <  SRR4302540.693068/94‑1 (MQ=60)
                      GTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGG                                                                         <  SRR4302540.4276702/94‑1 (MQ=60)
                      GTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGA                                                                         >  SRR4302540.3172554/1‑94 (MQ=60)
                        GATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAA                                                                       <  SRR4302540.9402413/94‑1 (MQ=60)
                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAGTTAAGGAGTGGAAA                                                                      >  SRR4302540.6146595/1‑94 (MQ=60)
                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302540.2074255/1‑94 (MQ=60)
                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302540.4238232/1‑94 (MQ=60)
                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302540.2930740/1‑94 (MQ=60)
                           AAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAG                                                                    >  SRR4302540.8967049/1‑94 (MQ=60)
                           AAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAG                                                                    <  SRR4302540.5542704/94‑1 (MQ=60)
                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   >  SRR4302540.5313102/1‑94 (MQ=60)
                            AGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGA                                                                   <  SRR4302540.8521134/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302540.2137931/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  >  SRR4302540.3854490/1‑94 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302540.7107345/1‑94 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302540.2808106/1‑94 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302540.4013581/1‑94 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302540.8074702/1‑94 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                <  SRR4302540.6727244/94‑1 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                <  SRR4302540.9329770/94‑1 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                <  SRR4302540.3727719/94‑1 (MQ=60)
                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               <  SRR4302540.114248/94‑1 (MQ=60)
                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               >  SRR4302540.5657319/1‑94 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302540.8869514/94‑1 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302540.6895796/94‑1 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302540.9488927/94‑1 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              >  SRR4302540.9496300/1‑94 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGACAAGATGATCA                                                             <  SRR4302540.10008605/94‑1 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             <  SRR4302540.8220998/94‑1 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            <  SRR4302540.10007428/94‑1 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            >  SRR4302540.1189748/1‑94 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            >  SRR4302540.5631634/1‑94 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGATGTTTTAATTAAGGAGTGGAAACGATGAGCAT                                                            >  SRR4302540.2587933/1‑94 (MQ=60)
                                    TTTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATG                                                           >  SRR4302540.5025650/1‑94 (MQ=60)
                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           <  SRR4302540.9768745/94‑1 (MQ=60)
                                     ATCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302540.2492071/94‑1 (MQ=60)
                                      TCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGG                                                         <  SRR4302540.6172045/94‑1 (MQ=60)
                                       CACGCGTTAATGCTAGCGGAATTGATTATCTGTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGA                                                        <  SRR4302540.1770113/94‑1 (MQ=60)
                                       CACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGA                                                        <  SRR4302540.8841041/94‑1 (MQ=60)
                                        ACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAA                                                       <  SRR4302540.3316192/94‑1 (MQ=60)
                                        ACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAA                                                       >  SRR4302540.2098529/1‑94 (MQ=60)
                                         CGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGGGGAAACAATGATCATCGGAAA                                                      >  SRR4302540.6291393/1‑94 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAACT                                                     >  SRR4302540.8736791/1‑94 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     >  SRR4302540.709445/1‑94 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     <  SRR4302540.4872521/94‑1 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     <  SRR4302540.6616392/94‑1 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     <  SRR4302540.6439272/94‑1 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     <  SRR4302540.9846997/94‑1 (MQ=60)
                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    >  SRR4302540.6646304/1‑94 (MQ=60)
                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    <  SRR4302540.4605989/94‑1 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   <  SRR4302540.6885084/94‑1 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   <  SRR4302540.3236832/94‑1 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302540.3944980/1‑94 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302540.7694719/1‑94 (MQ=60)
                                             TTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATT                                                  <  SRR4302540.82895/94‑1 (MQ=60)
                                              TAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTC                                                 <  SRR4302540.2524026/94‑1 (MQ=60)
                                               AAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAGTTAAGCGTGGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCA                                                >  SRR4302540.6502872/1‑94 (MQ=60)
                                               AAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCA                                                >  SRR4302540.5348118/1‑94 (MQ=60)
                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302540.439995/94‑1 (MQ=60)
                                                 GGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATA                                              <  SRR4302540.867834/94‑1 (MQ=60)
                                                 GGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATA                                              <  SRR4302540.1693840/94‑1 (MQ=60)
                                                  GCTATCGGAATTGATTATCTTTTCGTATAGCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             <  SRR4302540.6044337/94‑1 (MQ=60)
                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             <  SRR4302540.8900332/94‑1 (MQ=60)
                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             >  SRR4302540.7733067/1‑94 (MQ=60)
                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             >  SRR4302540.3655708/1‑94 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302540.4023720/94‑1 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302540.3024307/94‑1 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            >  SRR4302540.5638888/1‑94 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302540.5195882/94‑1 (MQ=60)
                                                    TAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATC                                           <  SRR4302540.7513492/94‑1 (MQ=60)
                                                    CAGCGGAATTTATTATCTTTTTGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGGGGAAAAGATGATCAGCGGAAATATTCATAATC                                           <  SRR4302540.7807562/94‑1 (MQ=60)
                                                     AGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCT                                          <  SRR4302540.8114109/94‑1 (MQ=60)
                                                      GCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTT                                         <  SRR4302540.5060999/94‑1 (MQ=60)
                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302540.4162351/1‑94 (MQ=60)
                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        <  SRR4302540.1116682/94‑1 (MQ=60)
                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        <  SRR4302540.1504140/94‑1 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTCAGGAGTGGAAAAGACGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302540.4981296/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302540.4381043/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302540.7023082/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302540.3893527/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAAGGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302540.9813095/94‑1 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      >  SRR4302540.3303483/1‑94 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      <  SRR4302540.46360/94‑1 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     <  SRR4302540.8001613/94‑1 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     >  SRR4302540.3018826/1‑94 (MQ=60)
                                                           ATTGATTATCTTTTCGTATAACTATAGAAATGAAGCTTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302540.1870210/1‑94 (MQ=60)
                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302540.5664121/1‑94 (MQ=60)
                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302540.6259254/1‑94 (MQ=60)
                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   >  SRR4302540.265630/1‑94 (MQ=60)
                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   <  SRR4302540.9176830/94‑1 (MQ=60)
                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   >  SRR4302540.9747099/1‑94 (MQ=60)
                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  >  SRR4302540.2652351/1‑94 (MQ=60)
                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  <  SRR4302540.8954058/94‑1 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 >  SRR4302540.173334/1‑94 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 <  SRR4302540.2146685/94‑1 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 >  SRR4302540.2003750/1‑94 (MQ=60)
                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                >  SRR4302540.3369158/1‑94 (MQ=60)
                                                                TTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGC                               <  SRR4302540.6596611/94‑1 (MQ=60)
                                                                 TATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCT                              <  SRR4302540.8238482/94‑1 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATTAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302540.10132582/94‑1 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            >  SRR4302540.9816981/1‑94 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302540.1463134/94‑1 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302540.4036206/94‑1 (MQ=60)
                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           <  SRR4302540.2807001/94‑1 (MQ=60)
                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           <  SRR4302540.2737677/94‑1 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGTGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACTC                          >  SRR4302540.1416241/1‑94 (MQ=60)
                                                                        TCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAG                       <  SRR4302540.1927791/94‑1 (MQ=60)
                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      >  SRR4302540.7634804/1‑94 (MQ=60)
                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      >  SRR4302540.6911648/1‑94 (MQ=60)
                                                                          GTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGA                     <  SRR4302540.1690594/94‑1 (MQ=60)
                                                                          GTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGA                     >  SRR4302540.7244298/1‑94 (MQ=60)
                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAG                    >  SRR4302540.7360600/1‑94 (MQ=60)
                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAG                    >  SRR4302540.10150769/1‑94 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302540.4802637/1‑94 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   <  SRR4302540.3464094/94‑1 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302540.1427844/1‑94 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302540.7540323/94‑1 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302540.8436068/1‑94 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302540.4278930/1‑94 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302540.9635205/94‑1 (MQ=60)
                                                                                CGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACG               >  SRR4302540.2571586/1‑94 (MQ=60)
                                                                                 GATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGC              >  SRR4302540.8573044/1‑94 (MQ=60)
                                                                                 GATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGC              <  SRR4302540.7550516/94‑1 (MQ=60)
                                                                                   TAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCA            <  SRR4302540.574678/94‑1 (MQ=60)
                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302540.7428173/94‑1 (MQ=60)
                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302540.3418440/94‑1 (MQ=60)
                                                                                     GAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGG          <  SRR4302540.9095416/94‑1 (MQ=60)
                                                                                     GAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGG          <  SRR4302540.7893163/94‑1 (MQ=60)
                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         <  SRR4302540.4761884/94‑1 (MQ=60)
                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         >  SRR4302540.7918797/1‑94 (MQ=60)
                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         <  SRR4302540.4879516/94‑1 (MQ=60)
                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         >  SRR4302540.3325114/1‑94 (MQ=60)
                                                                                      AAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGC         >  SRR4302540.5592126/1‑94 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        <  SRR4302540.5112659/94‑1 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        <  SRR4302540.4962693/94‑1 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        >  SRR4302540.2225881/1‑94 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        >  SRR4302540.8356975/1‑94 (MQ=60)
                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302540.2434817/1‑94 (MQ=60)
                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302540.7318802/1‑94 (MQ=60)
                                                                                         TGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT      >  SRR4302540.9457165/1‑94 (MQ=60)
                                                                                         TGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT      <  SRR4302540.4087779/94‑1 (MQ=60)
                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     <  SRR4302540.10156917/94‑1 (MQ=60)
                                                                                            AGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGA   >  SRR4302540.6398350/1‑94 (MQ=60)
                                                                                             GCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACACCAGGAGTTACGCCAGGCGATTGAG  <  SRR4302540.4974419/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑