Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,473,339	A→G	E122G (GAA→GGA)	yjgL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,473,339	0	A	G	99.8%	1773.5 / NA	544	E122G (GAA→GGA)	yjgL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (272/271); minor base C (1/0); total (273/271)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 561 total aligned reads displayed.

ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT  >  NC_000913/4473249‑4473428

 tatGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACg                                                                                        >  2:9093180/1‑93 (MQ=255)

 tatGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACg                                                                                        <  2:6847879/93‑1 (MQ=255)

  atgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGa                                                                                       >  1:6593014/1‑93 (MQ=255)

   tgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAg                                                                                      <  1:9657970/93‑1 (MQ=255)

     atgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCg                                                                                    <  1:9845304/93‑1 (MQ=255)

      tgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCgg                                                                                   <  1:7003211/93‑1 (MQ=255)

       ggatCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGa                                                                                  <  1:5729597/90‑1 (MQ=255)

       ggCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGa                                                                                  <  1:7511194/93‑1 (MQ=255)

         cTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAtt                                                                                <  2:8482713/93‑1 (MQ=255)

          tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc                                                                               >  1:527484/1‑93 (MQ=255)

          tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc                                                                               >  2:2869299/1‑93 (MQ=255)

            atatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAc                                                                             <  2:5599904/93‑1 (MQ=255)

             tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc                                                                            >  1:1107520/1‑93 (MQ=255)

             tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc                                                                            <  1:7180732/93‑1 (MQ=255)

             tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc                                                                            >  1:8412406/1‑93 (MQ=255)

             tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc                                                                            >  2:3373774/1‑93 (MQ=255)

               ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa                                                                          >  1:413113/1‑93 (MQ=255)

               ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa                                                                          <  2:3864143/93‑1 (MQ=255)

                tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa                                                                         <  2:1871785/93‑1 (MQ=255)

                tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa                                                                         >  1:1405503/1‑93 (MQ=255)

                 aaGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAg                                                                        <  2:2665709/93‑1 (MQ=255)

                 aaGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAg                                                                        <  2:3602772/93‑1 (MQ=255)

                  aGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAgg                                                                       >  2:301596/1‑93 (MQ=255)

                  aGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAgg                                                                       <  1:1333885/93‑1 (MQ=255)

                     ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa                                                                    >  2:2483046/1‑93 (MQ=255)

                     ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa                                                                    >  2:10023864/1‑93 (MQ=255)

                     ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa                                                                    >  2:9370313/1‑93 (MQ=255)

                     ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa                                                                    <  2:1235200/93‑1 (MQ=255)

                        taTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATta                                                                 <  2:4253874/92‑1 (MQ=255)

                         aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat                                                                <  1:6747726/93‑1 (MQ=255)

                         aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat                                                                <  1:1240131/93‑1 (MQ=255)

                          tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata                                                               >  1:3960727/1‑93 (MQ=255)

                          tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata                                                               <  1:8212443/93‑1 (MQ=255)

                              aTTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGaat                                                           >  1:563690/1‑92 (MQ=255)

                               ttCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAt                                                          >  2:6985272/1‑93 (MQ=255)

                                 cTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAttt                                                        <  2:4855511/93‑1 (MQ=255)

                                     aGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACt                                                    <  2:1979100/93‑1 (MQ=255)

                                         aCTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTcc                                                >  1:1715387/1‑93 (MQ=255)

                                         aCTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTcc                                                <  1:4930554/93‑1 (MQ=255)

                                          cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa                                               >  1:7324241/1‑93 (MQ=255)

                                           tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAc                                              >  2:7740011/1‑93 (MQ=255)

                                             aTGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTa                                            >  2:7232824/1‑93 (MQ=255)

                                              tGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAt                                           >  2:756383/1‑93 (MQ=255)

                                               tgCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACCATc                                          <  2:1332452/92‑1 (MQ=255)

                                               ggCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATc                                          >  1:5935406/1‑93 (MQ=255)

                                               ggCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATc                                          <  1:9210928/93‑1 (MQ=255)

                                                 cAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCac                                        <  2:4752851/93‑1 (MQ=255)

                                                    tGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCactac                                     >  1:932858/1‑93 (MQ=255)

                                                    tGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCactac                                     >  2:6607512/1‑93 (MQ=255)

                                                    tGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCactac                                     <  1:3441221/93‑1 (MQ=255)

                                                     gAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGCCGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCactact                                    >  2:5121908/1‑93 (MQ=255)

                                                      aaaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCActacta                                   <  1:100084/93‑1 (MQ=255)

                                                      aaaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCActacta                                   <  1:6180626/93‑1 (MQ=255)

                                                       aaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAt                                  >  2:3998515/1‑93 (MQ=255)

                                                        aaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATg                                 >  1:3721384/1‑93 (MQ=255)

                                                        aaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCAAAGGTGATTATAGAAATTTCACTTCCCACTATCACTACTATg                                 <  2:3437482/93‑1 (MQ=255)

                                                           aTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgggg                              >  1:196912/1‑93 (MQ=255)

                                                           aTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgggg                              >  1:8835526/1‑93 (MQ=255)

                                                            tGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGa                             >  2:2166421/1‑93 (MQ=255)

                                                               aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc                          <  2:1398514/93‑1 (MQ=255)

                                                               aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc                          >  2:6010796/1‑93 (MQ=255)

                                                                gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCg                         >  1:956654/1‑93 (MQ=255)

                                                                gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCg                         >  2:6344948/1‑93 (MQ=255)

                                                                  tttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTc                       <  1:244826/93‑1 (MQ=255)

                                                                  tgtACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTc                       <  1:5532750/91‑1 (MQ=255)

                                                                   ttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCa                      <  2:1776708/93‑1 (MQ=255)

                                                                   ttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCa                      <  1:7784596/93‑1 (MQ=255)

                                                                    tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa                     <  2:8692561/93‑1 (MQ=255)

                                                                    tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa                     <  2:5034235/93‑1 (MQ=255)

                                                                    tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa                     <  2:5790208/93‑1 (MQ=255)

                                                                     aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg                    <  2:4608425/93‑1 (MQ=255)

                                                                     aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg                    <  1:4439059/93‑1 (MQ=255)

                                                                      cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAgg                   <  1:2985199/93‑1 (MQ=255)

                                                                      cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAgg                   <  2:6159148/93‑1 (MQ=255)

                                                                      cATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAgg                   >  1:6046961/1‑93 (MQ=255)

                                                                       aggAATAATCCTGTAGGGGGACGATCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCTCTACTATGGGGACTCGTCAAGGa                  <  2:2064632/91‑1 (MQ=255)

                                                                       aTGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGa                  >  1:2236186/1‑93 (MQ=255)

                                                                        tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc                 >  1:4062212/1‑93 (MQ=255)

                                                                         gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa                <  1:6405009/93‑1 (MQ=255)

                                                                         gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa                >  1:4231148/1‑93 (MQ=255)

                                                                         gAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACa                <  2:1067561/93‑1 (MQ=255)

                                                                          aataatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAt               <  1:2784679/93‑1 (MQ=255)

                                                                           ttaaaCCTGTAGGGGGGCGAGGGGGTTTACCCCAGGGGATTATAGAAAATTTACTTTCCCCTATCACTACTATGGGGACTCGTCAAGGAAATa              >  2:8203636/2‑93 (MQ=255)

                                                                            taatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATAc             <  2:2762512/93‑1 (MQ=255)

                                                                             aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa            <  2:5328878/93‑1 (MQ=255)

                                                                             aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa            <  2:2302438/93‑1 (MQ=255)

                                                                             aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa            >  2:9723567/1‑93 (MQ=255)

                                                                              atCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAg           >  2:4318405/1‑93 (MQ=255)

                                                                               tCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGc          >  1:8651109/1‑93 (MQ=255)

                                                                                 cTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTGCTATGGGGACTCGTCAAGGACATACAGCCa        >  2:9822790/1‑93 (MQ=255)

                                                                                 cTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCa        >  1:3564867/1‑93 (MQ=255)

                                                                                 cTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCa        >  1:4631474/1‑93 (MQ=255)

                                                                                    tAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATta     >  2:7915012/1‑93 (MQ=255)

                                                                                    tAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATta     >  2:6710322/1‑93 (MQ=255)

                                                                                    tAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATta     <  2:8824351/93‑1 (MQ=255)

                                                                                    tAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATta     <  1:8031429/93‑1 (MQ=255)

                                                                                     aGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat    <  2:8379697/93‑1 (MQ=255)

                                                                                     aGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat    >  1:6467347/1‑93 (MQ=255)

                                                                                     aGGGGGACGAGCGGAATCACCCAAGGTGATTATAGAAATTTCACTATCCACTATCACTACTATAGGGACTCGTCAAGGACATACAGCCATtaa    <  1:8930240/93‑2 (MQ=255)

                                                                                      ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata   >  2:8033734/1‑93 (MQ=255)

ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT  >  NC_000913/4473249‑4473428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 285 total aligned reads displayed.

GAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGA‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTC  >  NC_000913/4473246‑4473431

 AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑A                                                                                             <  SRR4302540.285887/94‑1 (MQ=60)

 AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑A                                                                                             <  SRR4302540.9359270/94‑1 (MQ=60)

 AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑A                                                                                             >  SRR4302540.4498371/1‑94 (MQ=60)

  AATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑AC                                                                                            <  SRR4302540.6971862/94‑1 (MQ=60)

   ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACG                                                                                           <  SRR4302540.6535849/94‑1 (MQ=60)

   ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACG                                                                                           <  SRR4302540.6573293/94‑1 (MQ=60)

    TATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGA                                                                                          >  SRR4302540.6666030/1‑94 (MQ=60)

     ATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAG                                                                                         <  SRR4302540.6504604/94‑1 (MQ=60)

      TGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGC                                                                                        <  SRR4302540.5771903/94‑1 (MQ=60)

       TATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCG                                                                                       <  SRR4302540.1021227/94‑1 (MQ=60)

       GATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCG                                                                                       <  SRR4302540.3555189/94‑1 (MQ=60)

       GATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCG                                                                                       >  SRR4302540.7697799/1‑94 (MQ=60)

         TGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGA                                                                                     <  SRR4302540.10019110/94‑1 (MQ=60)

         TGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGA                                                                                     <  SRR4302540.7080918/94‑1 (MQ=60)

          GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGAT                                                                                    >  SRR4302540.1224124/1‑94 (MQ=60)

          GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGAT                                                                                    <  SRR4302540.7595154/94‑1 (MQ=60)

          GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGAT                                                                                    <  SRR4302540.4179425/94‑1 (MQ=60)

          GGATCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGAT                                                                                    <  SRR4302540.5792692/94‑1 (MQ=60)

           GCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATT                                                                                   >  SRR4302540.6839460/1‑94 (MQ=60)

           GCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATT                                                                                   >  SRR4302540.6535679/1‑94 (MQ=60)

            CTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTC                                                                                  <  SRR4302540.5829117/94‑1 (MQ=60)

            CTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTC                                                                                  >  SRR4302540.533188/1‑94 (MQ=60)

             TCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCC                                                                                 >  SRR4302540.2831592/1‑94 (MQ=60)

             TCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCA                                                                                 >  SRR4302540.6190722/1‑94 (MQ=60)

             TCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCA                                                                                 >  SRR4302540.6190721/1‑94 (MQ=60)

              CATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCAC                                                                                <  SRR4302540.1159197/94‑1 (MQ=60)

               ATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACC                                                                               >  SRR4302540.8510048/1‑94 (MQ=60)

               ATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACC                                                                               >  SRR4302540.995583/1‑94 (MQ=60)

               ATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACC                                                                               >  SRR4302540.1118959/1‑94 (MQ=60)

                TATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCC                                                                              >  SRR4302540.2181854/1‑94 (MQ=60)

                TATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCC                                                                              <  SRR4302540.7260788/94‑1 (MQ=60)

                 ATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCA                                                                             <  SRR4302540.6869723/94‑1 (MQ=60)

                  TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAA                                                                            >  SRR4302540.1420640/1‑94 (MQ=60)

                  TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAA                                                                            >  SRR4302540.7687210/1‑94 (MQ=60)

                  TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAA                                                                            <  SRR4302540.930767/94‑1 (MQ=60)

                   TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAG                                                                           <  SRR4302540.7263500/94‑1 (MQ=60)

                   TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAG                                                                           <  SRR4302540.6372259/94‑1 (MQ=60)

                   TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAG                                                                           >  SRR4302540.565492/1‑94 (MQ=60)

                   TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAG                                                                           <  SRR4302540.2411631/94‑1 (MQ=60)

                   TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAG                                                                           <  SRR4302540.9811763/94‑1 (MQ=60)

                    AAGTCCTTATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGG                                                                          <  SRR4302540.3608936/94‑1 (MQ=60)

                     AGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGT                                                                         <  SRR4302540.1347838/94‑1 (MQ=60)

                     AGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGT                                                                         <  SRR4302540.5584141/94‑1 (MQ=60)

                     AGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGT                                                                         <  SRR4302540.5948291/94‑1 (MQ=60)

                      GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTG                                                                        <  SRR4302540.469671/94‑1 (MQ=60)

                      GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTG                                                                        <  SRR4302540.9726590/94‑1 (MQ=60)

                      GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTG                                                                        >  SRR4302540.9599139/1‑94 (MQ=60)

                      GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTG                                                                        <  SRR4302540.8900388/94‑1 (MQ=60)

                       TCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGA                                                                       >  SRR4302540.151427/1‑94 (MQ=60)

                        CCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGAT                                                                      >  SRR4302540.2541094/1‑94 (MQ=60)

                        CCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGAT                                                                      >  SRR4302540.8882187/1‑94 (MQ=60)

                         CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATT                                                                     <  SRR4302540.5053482/94‑1 (MQ=60)

                         CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATT                                                                     >  SRR4302540.7404688/1‑94 (MQ=60)

                         CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATT                                                                     >  SRR4302540.1393281/1‑94 (MQ=60)

                          TCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTA                                                                    >  SRR4302540.5640564/1‑94 (MQ=60)

                           CATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTAT                                                                   >  SRR4302540.8094657/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.5062758/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.2731760/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.8476933/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.6645689/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.4879364/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.4003445/1‑94 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  <  SRR4302540.1252793/94‑1 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATA                                                                  <  SRR4302540.6822287/94‑1 (MQ=60)

                            ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGAATTCACCCAAGGTGATTATA                                                                  >  SRR4302540.3520556/1‑94 (MQ=60)

                             TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAG                                                                 <  SRR4302540.8307896/94‑1 (MQ=60)

                              CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGA                                                                <  SRR4302540.7392223/94‑1 (MQ=60)

                              CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGA                                                                >  SRR4302540.5648146/1‑94 (MQ=60)

                               TTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAA                                                               >  SRR4302540.8855808/1‑94 (MQ=60)

                               TTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGCAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAA                                                               <  SRR4302540.3171387/94‑1 (MQ=60)

                                TATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAA                                                              >  SRR4302540.569820/1‑94 (MQ=60)

                                 ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAAT                                                             >  SRR4302540.7579276/1‑94 (MQ=60)

                                 ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAAT                                                             >  SRR4302540.5332836/1‑94 (MQ=60)

                                 ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAAT                                                             <  SRR4302540.804986/94‑1 (MQ=60)

                                 ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAAT                                                             >  SRR4302540.8273238/1‑94 (MQ=60)

                                 ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAAT                                                             >  SRR4302540.9954760/1‑94 (MQ=60)

                                  TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATT                                                            <  SRR4302540.3920/94‑1 (MQ=60)

                                  TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATT                                                            >  SRR4302540.895102/1‑94 (MQ=60)

                                  TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATT                                                            <  SRR4302540.9020062/94‑1 (MQ=60)

                                    taaaaagataTAATGGCAATGAAAAAAGGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTC                                                          <  SRR4302540.3067388/84‑1 (MQ=60)

                                    CTAAAGATACTAATGGCAATTAAAAAATGAAGGTTTACATGAATAATCTGGTAGGGGA‑ACGAGCGtatgtaccccacttgtttatagaaatttc                                                          >  SRR4302540.9030257/1‑65 (MQ=60)

                                    CTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGACTAATCCTGTAGGGGG‑ACGAGAGGATNCANNNAANGTGATTAnnannntntc                                                          >  SRR4302540.218079/1‑84 (MQ=60)

                                     TAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCA                                                         <  SRR4302540.671925/94‑1 (MQ=60)

                                      AAAGATATTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGCGG‑ACGAGCTGATTCACCCAAGGTGATTATAGAAATTTCAC                                                        <  SRR4302540.1907564/94‑1 (MQ=60)

                                      AAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCAC                                                        <  SRR4302540.4768178/94‑1 (MQ=60)

                                      AAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCAC                                                        <  SRR4302540.2014668/94‑1 (MQ=60)

                                       AAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACT                                                       <  SRR4302540.231649/94‑1 (MQ=60)

                                          ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC                                                    <  SRR4302540.6908166/94‑1 (MQ=60)

                                          ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC                                                    >  SRR4302540.2858334/1‑94 (MQ=60)

                                          ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC                                                    >  SRR4302540.4320437/1‑94 (MQ=60)

                                          ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC                                                    >  SRR4302540.6082682/1‑94 (MQ=60)

                                          ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC                                                    >  SRR4302540.9698886/1‑94 (MQ=60)

                                           TACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCC                                                   >  SRR4302540.1733914/1‑94 (MQ=60)

                                           TACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCC                                                   <  SRR4302540.5625116/94‑1 (MQ=60)

                                            ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA                                                  >  SRR4302540.1938273/1‑94 (MQ=60)

                                            ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA                                                  <  SRR4302540.4983706/94‑1 (MQ=60)

                                             CTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAC                                                 <  SRR4302540.3633640/94‑1 (MQ=60)

                                             CTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGGAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAC                                                 <  SRR4302540.3633641/94‑1 (MQ=60)

                                               AATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTA                                               >  SRR4302540.9175550/1‑94 (MQ=60)

                                               AATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTA                                               >  SRR4302540.9751882/1‑94 (MQ=60)

                                                ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT                                              >  SRR4302540.4751828/1‑94 (MQ=60)

                                                ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT                                              >  SRR4302540.8159413/1‑94 (MQ=60)

                                                ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT                                              >  SRR4302540.4296088/1‑94 (MQ=60)

                                                ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT                                              >  SRR4302540.937812/1‑94 (MQ=60)

                                                  GGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCA                                            <  SRR4302540.4107427/94‑1 (MQ=60)

                                                  GGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCA                                            <  SRR4302540.4107426/94‑1 (MQ=60)

                                                  GGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCA                                            >  SRR4302540.6056943/1‑94 (MQ=60)

                                                  GGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCA                                            <  SRR4302540.9321447/94‑1 (MQ=60)

                                                  GGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCA                                            <  SRR4302540.7483394/94‑1 (MQ=60)

                                                   GCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCAC                                           >  SRR4302540.4211022/1‑94 (MQ=60)

                                                   GCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCAC                                           <  SRR4302540.6659179/94‑1 (MQ=60)

                                                    CAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGCTTCACCCAAGGCGATTATAGAAATTTCACTTTCCACTATCACT                                          >  SRR4302540.1371587/1‑94 (MQ=60)

                                                    CAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACT                                          >  SRR4302540.9601116/1‑94 (MQ=60)

                                                    CAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACT                                          >  SRR4302540.1371586/1‑94 (MQ=60)

                                                      ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC                                        <  SRR4302540.9216165/94‑1 (MQ=60)

                                                      ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC                                        >  SRR4302540.942651/1‑94 (MQ=60)

                                                      ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC                                        <  SRR4302540.7143188/94‑1 (MQ=60)

                                                      ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC                                        >  SRR4302540.7944866/1‑94 (MQ=60)

                                                      ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC                                        >  SRR4302540.8746379/1‑94 (MQ=60)

                                                       TGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACT                                       <  SRR4302540.3478632/94‑1 (MQ=60)

                                                        GAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTA                                      >  SRR4302540.3869552/1‑94 (MQ=60)

                                                        GAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTA                                      <  SRR4302540.6670621/94‑1 (MQ=60)

                                                        GAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTA                                      >  SRR4302540.422037/1‑94 (MQ=60)

                                                         AAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAT                                     <  SRR4302540.1177996/94‑1 (MQ=60)

                                                         AAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAT                                     <  SRR4302540.101147/94‑1 (MQ=60)

                                                         AAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAT                                     <  SRR4302540.6249471/94‑1 (MQ=60)

                                                          AAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATG                                    <  SRR4302540.9674262/94‑1 (MQ=60)

                                                          AAAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATG                                    >  SRR4302540.9682515/1‑94 (MQ=60)

                                                           AAAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGG                                   >  SRR4302540.8597954/1‑94 (MQ=60)

                                                            AAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG                                  <  SRR4302540.1704651/94‑1 (MQ=60)

                                                            AAATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG                                  >  SRR4302540.1303833/1‑94 (MQ=60)

                                                             AATGAAGTTTTACATGAATAATCCTGTAGGGTG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG                                 >  SRR4302540.6401250/1‑94 (MQ=60)

                                                             AATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG                                 >  SRR4302540.8937722/1‑94 (MQ=60)

                                                             AATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG                                 <  SRR4302540.5756417/94‑1 (MQ=60)

                                                             AATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG                                 >  SRR4302540.7138619/1‑94 (MQ=60)

                                                             AATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG                                 >  SRR4302540.198862/1‑94 (MQ=60)

                                                              ATGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGA                                >  SRR4302540.10016989/1‑94 (MQ=60)

                                                               TGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAC                               >  SRR4302540.7107451/1‑94 (MQ=60)

                                                               TGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAC                               <  SRR4302540.4581086/94‑1 (MQ=60)

                                                               TGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAC                               >  SRR4302540.9346429/1‑94 (MQ=60)

                                                               AGAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAC                               <  SRR4302540.3489253/94‑1 (MQ=60)

                                                                GAAGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACT                              >  SRR4302540.6199977/1‑94 (MQ=60)

                                                                  AGTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCG                            <  SRR4302540.10054488/94‑1 (MQ=60)

                                                                   GTTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT                           >  SRR4302540.5710501/1‑94 (MQ=60)

                                                                    TTTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTC                          <  SRR4302540.2466951/94‑1 (MQ=60)

                                                                     TTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCA                         >  SRR4302540.7071491/1‑94 (MQ=60)

                                                                     TTTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCA                         <  SRR4302540.247189/94‑1 (MQ=60)

                                                                      TTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAA                        <  SRR4302540.7875583/94‑1 (MQ=60)

                                                                      TTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAA                        >  SRR4302540.943317/1‑94 (MQ=60)

                                                                      TTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAA                        >  SRR4302540.5990961/1‑94 (MQ=60)

                                                                      TTACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAA                        >  SRR4302540.9919891/1‑94 (MQ=60)

                                                                       TACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG                       <  SRR4302540.2509283/94‑1 (MQ=60)

                                                                       TACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG                       >  SRR4302540.8444832/1‑94 (MQ=60)

                                                                        ACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGG                      <  SRR4302540.4487165/94‑1 (MQ=60)

                                                                        ACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGG                      >  SRR4302540.6114143/1‑94 (MQ=60)

                                                                        ACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGG                      <  SRR4302540.556949/94‑1 (MQ=60)

                                                                        ACATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGG                      <  SRR4302540.8261942/94‑1 (MQ=60)

                                                                         CATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA                     >  SRR4302540.6304600/1‑94 (MQ=60)

                                                                         CATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA                     >  SRR4302540.2260241/1‑94 (MQ=60)

                                                                         CATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA                     >  SRR4302540.4365967/1‑94 (MQ=60)

                                                                         CATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA                     <  SRR4302540.1077058/94‑1 (MQ=60)

                                                                         CATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGA                     <  SRR4302540.3018135/94‑1 (MQ=60)

                                                                          ATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    >  SRR4302540.4106012/1‑94 (MQ=60)

                                                                          ATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    >  SRR4302540.4106011/1‑94 (MQ=60)

                                                                          ATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    <  SRR4302540.1323971/94‑1 (MQ=60)

                                                                          ATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    >  SRR4302540.4145735/1‑94 (MQ=60)

                                                                          ATGAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    <  SRR4302540.4528549/94‑1 (MQ=60)

                                                                          ATGAATAATCCTGGAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAC                    <  SRR4302540.1323970/94‑1 (MQ=60)

                                                                           TGAATAATCCTGAAGGGGG‑ACGAGCAGATTCACCCAAGGTGATTATAGAAATTTCACTCTCCACTATCACTACTATGGGGACTCGTCCAGGACA                   >  SRR4302540.4277205/1‑94 (MQ=60)

                                                                            GAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT                  <  SRR4302540.6476304/94‑1 (MQ=60)

                                                                            GAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT                  >  SRR4302540.2028107/1‑94 (MQ=60)

                                                                            GAATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACAT                  <  SRR4302540.6030096/94‑1 (MQ=60)

                                                                             AATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATA                 <  SRR4302540.2814759/94‑1 (MQ=60)

                                                                             AATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATA                 >  SRR4302540.7567894/1‑94 (MQ=60)

                                                                              ATAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATAC                <  SRR4302540.864274/94‑1 (MQ=60)

                                                                               TAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA               <  SRR4302540.4068101/94‑1 (MQ=60)

                                                                               TAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA               >  SRR4302540.6703382/1‑94 (MQ=60)

                                                                               TAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA               <  SRR4302540.7567488/94‑1 (MQ=60)

                                                                               TAATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTAACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA               >  SRR4302540.7914656/1‑94 (MQ=60)

                                                                                AATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG              >  SRR4302540.3242382/1‑94 (MQ=60)

                                                                                 ATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGC             >  SRR4302540.8751606/1‑94 (MQ=60)

                                                                                 ATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGC             >  SRR4302540.8751605/1‑94 (MQ=60)

                                                                                 ATCCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGC             >  SRR4302540.3829623/1‑94 (MQ=60)

                                                                                   CCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCA           >  SRR4302540.4681079/1‑94 (MQ=60)

                                                                                   CCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCA           >  SRR4302540.3603811/1‑94 (MQ=60)

                                                                                   CCTGTAGGGGG‑ACGAGCGGATTCACCCAAGGCGATTATAGAAATTTCACTTTCCACTATCATTACTATGGGGACTAGTCAAGGACATACAGCCA           >  SRR4302540.3603807/1‑94 (MQ=60)

                                                                                    CTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAT          >  SRR4302540.4089874/1‑94 (MQ=60)

                                                                                    CTGTAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGACAT          >  SRR4302540.9226944/1‑94 (MQ=60)

                                                                                       TAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTAT       <  SRR4302540.5495010/94‑1 (MQ=60)

                                                                                       TAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTAT       <  SRR4302540.8124804/94‑1 (MQ=60)

                                                                                       TAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTAT       >  SRR4302540.6539310/1‑94 (MQ=60)

                                                                                       TAGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTAT       >  SRR4302540.4676924/1‑94 (MQ=60)

                                                                                        AGGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATA      >  SRR4302540.8541190/1‑94 (MQ=60)

                                                                                        AGGGGG‑ACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATA      >  SRR4302540.3969920/1‑94 (MQ=60)

                                                                                         GGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT     <  SRR4302540.2916037/94‑1 (MQ=60)

                                                                                         GGGGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT     <  SRR4302540.1528070/94‑1 (MQ=60)

                                                                                          GGGAGACGAGCGTATTCACCCAAGGTGATGATAGAAAGTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT     <  SRR4302540.1528067/94‑1 (MQ=60)

                                                                                           GGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTT   <  SRR4302540.5997777/94‑1 (MQ=60)

                                                                                           GGG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTT   <  SRR4302540.5895320/94‑1 (MQ=60)

                                                                                            GG‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTC  <  SRR4302540.4967973/94‑1 (MQ=60)

GAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGA‑ACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTC  >  NC_000913/4473246‑4473431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`