Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,473,339 |
A→G |
E122G (GAA→GGA) |
yjgL → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,473,339 | 0 | A | G | 100.0%
| 700.2
/ NA
| 214 | E122G (GAA→GGA) | yjgL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (121/93); total (121/93) |
Only 100 of 217 total aligned reads displayed.
ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT > NC_000913/4473249‑4473428
|
atatGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGAc < 2:4902757/93‑1 (MQ=255)
tatGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACg > 1:1660479/1‑93 (MQ=255)
tgatgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAg < 2:5069614/93‑1 (MQ=255)
atgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCg < 1:3190229/93‑1 (MQ=255)
tgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCgg > 1:5417343/1‑93 (MQ=255)
tgGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCgg > 1:417685/1‑93 (MQ=255)
ggCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGa > 2:1492385/1‑93 (MQ=255)
gCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAt > 2:6114512/1‑93 (MQ=255)
gCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAt > 1:4975065/1‑93 (MQ=255)
gCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAt > 1:5558814/1‑93 (MQ=255)
tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc < 2:3895156/93‑1 (MQ=255)
tCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTc > 1:2391852/1‑93 (MQ=255)
cATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCa < 1:6266247/93‑1 (MQ=255)
atatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAc < 2:5609058/93‑1 (MQ=255)
tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc > 2:5803921/1‑93 (MQ=255)
tatTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAcc > 1:3511044/1‑93 (MQ=255)
atTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAccc > 1:456756/1‑93 (MQ=255)
atTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAccc < 1:3604848/93‑1 (MQ=255)
ttAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCa < 2:2121295/93‑1 (MQ=255)
tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa < 2:5121178/93‑1 (MQ=255)
tAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCaa > 1:5429856/1‑93 (MQ=255)
aaGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAg < 2:1166234/93‑1 (MQ=255)
gTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGt < 2:3964944/93‑1 (MQ=255)
tCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTg > 1:2053525/1‑93 (MQ=255)
ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAATTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa < 2:2204926/93‑1 (MQ=255)
ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa > 2:5706149/1‑93 (MQ=255)
ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa > 2:3174428/1‑93 (MQ=255)
ccTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGa < 1:2822972/93‑1 (MQ=255)
cTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAt > 2:814506/1‑93 (MQ=255)
cTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAt < 1:3757390/93‑1 (MQ=255)
tCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAtt < 1:2660180/93‑1 (MQ=255)
cATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATta > 2:3412453/1‑93 (MQ=255)
cATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATta < 2:3437694/93‑1 (MQ=255)
aTCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtat < 2:1035418/93‑1 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata < 2:2729500/93‑1 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata > 2:3266583/1‑93 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata < 1:5144791/93‑1 (MQ=255)
tCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATtata < 2:464526/93‑1 (MQ=255)
cTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAg < 1:1359466/93‑1 (MQ=255)
ttATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGa < 2:1596663/93‑1 (MQ=255)
tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGaa < 1:4812709/93‑1 (MQ=255)
tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGaa < 2:4585819/93‑1 (MQ=255)
tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGaa > 1:2508923/1‑93 (MQ=255)
tATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGaa > 1:1844823/1‑93 (MQ=255)
tCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAtt > 1:2573237/1‑93 (MQ=255)
cTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAttt > 1:2941181/1‑93 (MQ=255)
cTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAttt > 1:5479612/1‑93 (MQ=255)
tAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTc > 1:702163/1‑93 (MQ=255)
tAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTc > 2:666687/1‑93 (MQ=255)
tAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTc > 2:4067772/1‑93 (MQ=255)
aGATACTAATGGTTATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGATATTTCACt < 2:6161482/93‑1 (MQ=255)
gATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACtt > 2:1320372/1‑93 (MQ=255)
aTACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACttt < 2:5646321/93‑1 (MQ=255)
aTACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACttt < 2:3914613/93‑1 (MQ=255)
tACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTc > 1:6279817/1‑93 (MQ=255)
aCTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTcc > 1:3543364/1‑93 (MQ=255)
aCTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTcc < 2:2475796/93‑1 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa > 2:1149332/1‑93 (MQ=255)
cTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCa < 1:5832659/93‑1 (MQ=255)
tAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAc < 1:2447793/93‑1 (MQ=255)
ggCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATc > 2:2367828/1‑93 (MQ=255)
ggCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATc > 1:5222710/1‑93 (MQ=255)
gAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCactact > 1:4414674/1‑93 (MQ=255)
aaaaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTAt < 2:2791983/93‑1 (MQ=255)
aaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgg < 2:6279871/93‑1 (MQ=255)
aaaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgg < 1:3811251/93‑1 (MQ=255)
aaTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATggg > 2:4361509/1‑93 (MQ=255)
aTGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATgggg < 1:5703015/93‑1 (MQ=255)
tGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGa > 2:2559347/1‑93 (MQ=255)
gAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAc < 2:4956581/93‑1 (MQ=255)
gAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAc > 1:3536257/1‑93 (MQ=255)
gAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAc < 2:523089/93‑1 (MQ=255)
aaGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACt > 2:5916204/1‑93 (MQ=255)
aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc > 1:5074581/1‑93 (MQ=255)
aGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTc < 1:893494/93‑1 (MQ=255)
gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCg > 2:546647/1‑93 (MQ=255)
gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCg < 2:2051053/93‑1 (MQ=255)
gTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCg < 1:2990297/93‑1 (MQ=255)
ttttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGt < 2:1930948/93‑1 (MQ=255)
ttttACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGt > 1:735275/1‑93 (MQ=255)
tACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCaa < 1:1111267/93‑1 (MQ=255)
aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg > 2:4797135/1‑93 (MQ=255)
aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg < 2:4460029/93‑1 (MQ=255)
aCATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAg > 2:553916/1‑93 (MQ=255)
aTGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGa < 2:250376/93‑1 (MQ=255)
tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc > 2:4186002/1‑93 (MQ=255)
tGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGAc > 2:5559230/1‑93 (MQ=255)
ataatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATa > 2:1723699/1‑93 (MQ=255)
taatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATAc < 1:5963493/93‑1 (MQ=255)
aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa < 1:4886459/93‑1 (MQ=255)
aatCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACa > 1:3362325/1‑93 (MQ=255)
ccTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGcc > 1:1998981/1‑93 (MQ=255)
cTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCa < 1:5322288/93‑1 (MQ=255)
cTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCa < 2:3051077/93‑1 (MQ=255)
gTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAtt > 2:5895451/1‑93 (MQ=255)
aGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtat > 2:2966812/1‑93 (MQ=255)
ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata < 1:3080553/93‑1 (MQ=255)
ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata > 1:2302903/1‑93 (MQ=255)
ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata > 1:399944/1‑93 (MQ=255)
ggggGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATtata < 1:787046/93‑1 (MQ=255)
|
ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT > NC_000913/4473249‑4473428
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCC > NC_000913/4473247‑4473432
|
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGA < SRR4302533.5082187/94‑1 (MQ=60)
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGA < SRR4302533.2995289/94‑1 (MQ=60)
AATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGAC < SRR4302533.5296540/94‑1 (MQ=60)
ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACG > SRR4302533.1670519/1‑94 (MQ=60)
ATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACG < SRR4302533.551410/94‑1 (MQ=60)
TATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGA > SRR4302533.1212406/1‑94 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG > SRR4302533.420190/1‑94 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG > SRR4302533.5449933/1‑94 (MQ=60)
ATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGG < SRR4302533.3209855/94‑1 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302533.2591997/1‑94 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302533.5005229/1‑94 (MQ=60)
GGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGAT > SRR4302533.5592411/1‑94 (MQ=60)
CTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTC > SRR4302533.2406617/1‑94 (MQ=60)
CATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCAC < SRR4302533.6303690/94‑1 (MQ=60)
ATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACC > SRR4302533.3532687/1‑94 (MQ=60)
TATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCC > SRR4302533.459486/1‑94 (MQ=60)
ATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCA < SRR4302533.3627036/94‑1 (MQ=60)
ATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCA > SRR4302533.278494/1‑94 (MQ=60)
ATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCA > SRR4302533.354621/1‑94 (MQ=60)
TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAA > SRR4302533.4925650/1‑94 (MQ=60)
TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAA > SRR4302533.3801499/1‑94 (MQ=60)
TTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAA > SRR4302533.5462557/1‑94 (MQ=60)
TAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAG < SRR4302533.2520371/94‑1 (MQ=60)
AAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGG > SRR4302533.4449041/1‑94 (MQ=60)
AAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGG < SRR4302533.790494/94‑1 (MQ=60)
GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTG > SRR4302533.713060/1‑94 (MQ=60)
GTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTG > SRR4302533.2066195/1‑94 (MQ=60)
TCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGA > SRR4302533.952375/1‑94 (MQ=60)
TCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGA > SRR4302533.531026/1‑94 (MQ=60)
CCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGAT < SRR4302533.2840343/94‑1 (MQ=60)
CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATT > SRR4302533.4153913/1‑94 (MQ=60)
CTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATT < SRR4302533.3780423/94‑1 (MQ=60)
TCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTA < SRR4302533.2676515/94‑1 (MQ=60)
CATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTAT > SRR4302533.5385913/1‑94 (MQ=60)
ATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATA > SRR4302533.5235040/1‑94 (MQ=60)
TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAG < SRR4302533.5175882/94‑1 (MQ=60)
TCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGAGACGAGCGGATTCACCCAAGGTGATTATAG > SRR4302533.6235033/1‑94 (MQ=60)
CTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGA < SRR4302533.1367637/94‑1 (MQ=60)
TTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAA > SRR4302533.1856073/1‑94 (MQ=60)
TTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAA > SRR4302533.2524381/1‑94 (MQ=60)
TATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAA < SRR4302533.4841877/94‑1 (MQ=60)
ATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAAT > SRR4302533.2445336/1‑94 (MQ=60)
TTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATT > SRR4302533.2589066/1‑94 (MQ=60)
TCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTT > SRR4302533.2959143/1‑94 (MQ=60)
TCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTT > SRR4302533.5512649/1‑94 (MQ=60)
CTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTC > SRR4302533.706317/1‑94 (MQ=60)
CTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTC > SRR4302533.4381546/1‑94 (MQ=60)
TAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCA < SRR4302533.4007709/94‑1 (MQ=60)
AAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCAC > SRR4302533.2997398/1‑94 (MQ=60)
AGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTT < SRR4302533.4939939/94‑1 (MQ=60)
AGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTT < SRR4302533.1865110/94‑1 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302533.4892592/1‑94 (MQ=60)
ATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTC > SRR4302533.6317304/1‑94 (MQ=60)
TACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCC > SRR4302533.1432520/1‑94 (MQ=60)
TACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCC > SRR4302533.3565199/1‑94 (MQ=60)
ACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCA < SRR4302533.545680/94‑1 (MQ=60)
CTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCAC < SRR4302533.5867910/94‑1 (MQ=60)
TAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACT > SRR4302533.347248/1‑94 (MQ=60)
TAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACT < SRR4302533.2462897/94‑1 (MQ=60)
AATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTA > SRR4302533.6010853/1‑94 (MQ=60)
ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT > SRR4302533.2111763/1‑94 (MQ=60)
ATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGCAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTAT > SRR4302533.3895538/1‑94 (MQ=60)
TGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATC > SRR4302533.5254133/1‑94 (MQ=60)
CAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACT > SRR4302533.3515122/1‑94 (MQ=60)
AATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTC > SRR4302533.5143194/1‑94 (MQ=60)
ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC > SRR4302533.4699616/1‑94 (MQ=60)
ATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTAC < SRR4302533.2035503/94‑1 (MQ=60)
TGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACT > SRR4302533.4441331/1‑94 (MQ=60)
AAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGG > SRR4302533.3099834/1‑94 (MQ=60)
AAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGG < SRR4302533.6307436/94‑1 (MQ=60)
AAAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGG > SRR4302533.682225/1‑94 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG < SRR4302533.1728689/94‑1 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG < SRR4302533.2539104/94‑1 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG > SRR4302533.3561841/1‑94 (MQ=60)
AAATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGG < SRR4302533.3834561/94‑1 (MQ=60)
AATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGG > SRR4302533.5643730/1‑94 (MQ=60)
ATGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGA < SRR4302533.5737462/94‑1 (MQ=60)
TGAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGAC > SRR4302533.3558052/1‑94 (MQ=60)
GAAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACT > SRR4302533.951663/1‑94 (MQ=60)
AAGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTC > SRR4302533.5105255/1‑94 (MQ=60)
AGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCG < SRR4302533.898745/94‑1 (MQ=60)
AGTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCG < SRR4302533.3221577/94‑1 (MQ=60)
GTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT < SRR4302533.3008586/94‑1 (MQ=60)
GTTTTACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGT > SRR4302533.739600/1‑94 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG < SRR4302533.1117861/94‑1 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG < SRR4302533.5950857/94‑1 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG < SRR4302533.5010562/94‑1 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAG > SRR4302533.301045/1‑94 (MQ=60)
TACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGGGATTATAGAAATTTCACTTTCCACTATCACTACTCTGGGGACTCGTCAAG > SRR4302533.3229400/1‑94 (MQ=60)
ACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGG < SRR4302533.3717874/94‑1 (MQ=60)
ACATGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGAGGACTCGTCAAGG > SRR4302533.3621761/1‑94 (MQ=60)
TGAATAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACA > SRR4302533.871436/1‑94 (MQ=60)
AATAATCCTGTAGGGGGGCGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCTCTATCACTACTATGGGGACTCGTCAAGGACATA < SRR4302533.5456927/94‑1 (MQ=60)
TAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA < SRR4302533.2145651/94‑1 (MQ=60)
TAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA > SRR4302533.3383098/1‑94 (MQ=60)
TAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACA < SRR4302533.5999572/94‑1 (MQ=60)
TAATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTAGTCAAGGACATACA > SRR4302533.240561/1‑94 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG > SRR4302533.5855293/1‑94 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG < SRR4302533.2826937/94‑1 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG < SRR4302533.4916065/94‑1 (MQ=60)
AATCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAG > SRR4302533.2846708/1‑94 (MQ=60)
TCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCC > SRR4302533.2011281/1‑94 (MQ=60)
TCCTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCC < SRR4302533.5494638/94‑1 (MQ=60)
CTGTAGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCAT < SRR4302533.5354183/94‑1 (MQ=60)
AGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATA > SRR4302533.402358/1‑94 (MQ=60)
AGGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATA > SRR4302533.2317169/1‑94 (MQ=60)
GGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT < SRR4302533.3099452/94‑1 (MQ=60)
GGGGGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATAT < SRR4302533.791670/94‑1 (MQ=60)
GGACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTC < SRR4302533.1071160/94‑1 (MQ=60)
GACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCC > SRR4302533.1963827/1‑94 (MQ=60)
GACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCC < SRR4302533.4684820/94‑1 (MQ=60)
|
AAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCC > NC_000913/4473247‑4473432
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
