Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,474,826 +A intergenic (+1/+44) yjgL → / ← argI hypothetical protein/ornithine carbamoyltransferase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,474,8231.A99.8% 1544.8 / ‑4.3 414coding (1849/1851 nt)yjgLhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base A (219/194);  total (220/194)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 463 total aligned reads displayed.

TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA  >  NC_000913/4474731‑4474909
                                                                                             |                                                                                       
ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat                                                                                          >  1:2760938/1‑93 (MQ=255)
ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat                                                                                          <  2:7555092/93‑1 (MQ=255)
ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat                                                                                          <  1:23720/93‑1 (MQ=255)
  aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa                                                                                       >  2:9369518/1‑93 (MQ=255)
  aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa                                                                                       >  2:4642041/1‑93 (MQ=255)
    tGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa‑aa                                                                                    >  1:4768739/1‑92 (MQ=255)
     gAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa‑aat                                                                                   >  1:2579668/1‑91 (MQ=255)
     gAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa‑aat                                                                                   >  2:5028601/1‑91 (MQ=255)
     gAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa‑aat                                                                                   <  1:3976093/93‑3 (MQ=255)
       aCAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑aa‑aataa                                                                                 >  2:2963799/1‑89 (MQ=255)
            gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGa                                                                             <  2:8578168/93‑1 (MQ=255)
            gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGa                                                                             <  1:9243406/93‑1 (MQ=255)
            gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGa                                                                             >  1:5860153/1‑93 (MQ=255)
             tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAt                                                                            >  1:6943713/1‑93 (MQ=255)
             tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAt                                                                            >  1:6226710/1‑93 (MQ=255)
              ttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATg                                                                           >  2:3245223/1‑93 (MQ=255)
               taaataaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGc                                                                          >  1:5356888/1‑93 (MQ=255)
               taaataaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGc                                                                          <  2:1637558/93‑1 (MQ=255)
                  ataaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCgg                                                                       >  2:6682639/1‑93 (MQ=255)
                   taaaCTCAATCCACCGGCATATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCggg                                                                      <  2:8961008/93‑1 (MQ=255)
                   taaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCggg                                                                      >  2:5266921/1‑93 (MQ=255)
                    aaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGa                                                                     <  2:4514870/93‑1 (MQ=255)
                      aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGGAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATg                                                                   <  1:5987299/93‑1 (MQ=255)
                      aCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATg                                                                   >  1:9783892/1‑93 (MQ=255)
                        tAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AACATAATGTGATGCCGGGATGGt                                                                 >  1:4049635/1‑93 (MQ=255)
                         aaaTCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGtt                                                                <  1:6789312/93‑1 (MQ=255)
                            tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgt                                                             <  2:7337311‑M1/93‑3 (MQ=255)
                             ccACCGGAAAATTTACGTATAGCAGTAGAACACTTTGGGTGGAAGCATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgta                                                            <  1:8978427‑M1/93‑4 (MQ=255)
                             ccACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgta                                                            >  1:4479501‑M1/1‑90 (MQ=255)
                              cACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtat                                                           >  2:6231509‑M1/1‑89 (MQ=255)
                              cACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtat                                                           <  1:7513662‑M1/93‑5 (MQ=255)
                                ccGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtattt                                                         >  2:4346405‑M1/1‑87 (MQ=255)
                                  ggAACATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcc                                                       <  1:9057456‑M1/93‑9 (MQ=255)
                                   gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccc                                                      >  2:1334142‑M1/1‑84 (MQ=255)
                                   gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccc                                                      >  2:2473922‑M1/1‑84 (MQ=255)
                                   gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccc                                                      <  1:1142572‑M1/93‑10 (MQ=255)
                                    aaaaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccg                                                     >  2:6948868‑M1/1‑83 (MQ=255)
                                     aaaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccgg                                                    >  1:8051673‑M1/1‑82 (MQ=255)
                                      aaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccgga                                                   >  2:8069086‑M1/1‑81 (MQ=255)
                                        tttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                 >  2:2033503‑M1/1‑79 (MQ=255)
                                        tttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                 >  1:9457536‑M1/1‑79 (MQ=255)
                                        tttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                 >  1:3839208‑M1/1‑79 (MQ=255)
                                        tttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                 <  2:8745849‑M1/93‑15 (MQ=255)
                                           aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt                                              <  1:3522307‑M1/93‑18 (MQ=255)
                                            cGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt                                             >  1:2157047‑M1/1‑75 (MQ=255)
                                             gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta                                            <  1:9402299‑M1/93‑20 (MQ=255)
                                             gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta                                            <  2:1163198‑M1/93‑20 (MQ=255)
                                              tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                           >  2:2310772‑M1/1‑73 (MQ=255)
                                              tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                           <  2:3973458‑M1/93‑21 (MQ=255)
                                              tataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                           >  1:6512626‑M1/1‑73 (MQ=255)
                                               ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata                                          <  2:766633‑M1/93‑22 (MQ=255)
                                                taGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                         <  1:77465‑M1/93‑23 (MQ=255)
                                                taGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                         <  1:8836557‑M1/93‑23 (MQ=255)
                                                taGCAATAGAACACTTTGGGAGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                         >  1:4941827‑M1/1‑71 (MQ=255)
                                                 aGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                        <  2:6490850‑M1/93‑24 (MQ=255)
                                                  gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg                                       >  1:6424387‑M1/1‑69 (MQ=255)
                                                     aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata                                    >  2:6753185‑M1/1‑66 (MQ=255)
                                                     aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata                                    <  2:9606127‑M1/93‑28 (MQ=255)
                                                      tAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                   >  1:6057063‑M1/1‑65 (MQ=255)
                                                      tAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                   >  2:1544417‑M1/1‑65 (MQ=255)
                                                        gAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGGTTgtatttcccggcatctttatagcgatagca                                 >  1:5667833‑M1/1‑63 (MQ=255)
                                                         aaCACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa                                <  2:7810595‑M1/93‑32 (MQ=255)
                                                         aaCACTTGTGGTGCAAGAATAGACCTATCACTGCAT‑AAGATAATGTGGTGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa                                <  1:3255337‑M1/93‑32 (MQ=255)
                                                          acacTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                               >  2:3378261‑M1/1‑61 (MQ=255)
                                                          acacTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                               >  1:9919433‑M1/1‑61 (MQ=255)
                                                             cTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat                            >  2:2881136‑M1/1‑58 (MQ=255)
                                                             cTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat                            >  2:5755483‑M1/1‑58 (MQ=255)
                                                              tttGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt                           <  2:3785425‑M1/93‑37 (MQ=255)
                                                              tttGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt                           <  2:9486235‑M1/93‑37 (MQ=255)
                                                              tttGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt                           <  2:9111012‑M1/93‑37 (MQ=255)
                                                                 gggTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac                        <  2:1435422‑M1/93‑40 (MQ=255)
                                                                 gggTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac                        >  2:5654501‑M1/1‑54 (MQ=255)
                                                                 gggTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattacttac                        <  2:7178180‑M1/93‑40 (MQ=255)
                                                                  ggTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact                       >  1:5148942‑M1/1‑53 (MQ=255)
                                                                   gTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg                      <  1:4157042‑M1/93‑42 (MQ=255)
                                                                   gTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg                      <  1:3392581‑M1/93‑42 (MQ=255)
                                                                    tGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga                     <  2:1886747‑M1/93‑43 (MQ=255)
                                                                     ggAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag                    <  2:2803457‑M1/93‑44 (MQ=255)
                                                                     ggAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag                    <  2:5191655‑M1/93‑44 (MQ=255)
                                                                     ggAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag                    <  2:3491908‑M1/93‑44 (MQ=255)
                                                                      gaagaaTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt                   >  2:1775149‑M1/1‑49 (MQ=255)
                                                                       aagaaTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGCTGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtg                  >  1:1677114‑M1/1‑48 (MQ=255)
                                                                       aagaaTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGATTgtatttcccggcatctttatagcgatagcaattatttactgagtg                  >  2:1028312‑M1/1‑48 (MQ=255)
                                                                         gaaTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc                >  2:6099098‑M1/1‑46 (MQ=255)
                                                                           aTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgc              >  1:10016482‑M1/1‑44 (MQ=255)
                                                                             aGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcga            <  2:7113964‑M1/93‑52 (MQ=255)
                                                                              gACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac           <  2:8001053‑M1/93‑53 (MQ=255)
                                                                              gACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac           >  2:9901155‑M1/1‑41 (MQ=255)
                                                                               aCCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgacc          >  2:5864190‑M1/1‑40 (MQ=255)
                                                                                 cTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat        >  1:2921102‑M1/1‑38 (MQ=255)
                                                                                 cTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat        <  1:9601473‑M1/93‑56 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  1:2006507‑M1/1‑37 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  2:4727896‑M1/1‑37 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  1:1460614‑M1/1‑37 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  1:8229113‑M1/1‑37 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  1:8493310‑M1/1‑37 (MQ=255)
                                                                                  tATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc       >  1:8395772‑M1/1‑37 (MQ=255)
                                                                                    tCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcac     <  2:1326482‑M1/93‑59 (MQ=255)
                                                                                    tCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcac     <  1:7906277‑M1/93‑59 (MQ=255)
                                                                                       cTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcaccgc  >  2:9188724‑M1/1‑32 (MQ=255)
                                                                                             |                                                                                       
TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA  >  NC_000913/4474731‑4474909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA  >  NC_000913/4474733‑4474909
                                                                                               |                                                                                              
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A                                                                                                >  SRR4302540.6062820/1‑94 (MQ=60)
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A                                                                                                >  SRR4302540.2786103/1‑94 (MQ=60)
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A                                                                                                >  SRR4302540.5462685/1‑94 (MQ=60)
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑A                                                                                                >  SRR4302540.8252976/1‑94 (MQ=60)
 ATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑AA                                                                                               >  SRR4302540.6198165/1‑94 (MQ=60)
 ATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑AA                                                                                               >  SRR4302540.4819669/1‑94 (MQ=60)
  TGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aat                                                                                              >  SRR4302540.6542567/1‑92 (MQ=60)
  TGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aat                                                                                              >  SRR4302540.6413212/1‑92 (MQ=60)
   GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata                                                                                             >  SRR4302540.9385435/1‑91 (MQ=60)
   GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata                                                                                             >  SRR4302540.9885974/1‑91 (MQ=60)
   GAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑Aata                                                                                             <  SRR4302540.4018933/94‑4 (MQ=60)
    AACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAA                                                                                             >  SRR4302540.9232011/1‑94 (MQ=60)
     ACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAAT                                                                                            >  SRR4302540.2897814/1‑94 (MQ=60)
     ACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAAT                                                                                            >  SRR4302540.9485994/1‑94 (MQ=60)
      CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATG                                                                                           >  SRR4302540.9091854/1‑94 (MQ=60)
      CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATG                                                                                           >  SRR4302540.5748699/1‑94 (MQ=60)
      CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATG                                                                                           >  SRR4302540.6903620/1‑94 (MQ=60)
      CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAACAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATG                                                                                           <  SRR4302540.697991/94‑1 (MQ=60)
        GCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTG                                                                                         <  SRR4302540.3262451/94‑1 (MQ=60)
         tcTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        <  SRR4302540.349061/92‑1 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        >  SRR4302540.5924959/1‑94 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        >  SRR4302540.5946903/1‑94 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        <  SRR4302540.4133467/94‑1 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        >  SRR4302540.9973734/1‑94 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        <  SRR4302540.349062/94‑1 (MQ=60)
         CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGA                                                                                        >  SRR4302540.1506360/1‑94 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTGCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       >  SRR4302540.7503546/1‑94 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       >  SRR4302540.7021001/1‑94 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       <  SRR4302540.7755096/94‑1 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       >  SRR4302540.6295961/1‑94 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       <  SRR4302540.9354105/94‑1 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       <  SRR4302540.1040970/94‑1 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       <  SRR4302540.8755104/94‑1 (MQ=60)
          GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGAT                                                                                       <  SRR4302540.1598493/94‑1 (MQ=60)
           TTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATG                                                                                      >  SRR4302540.10061111/1‑94 (MQ=60)
            TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGC                                                                                     >  SRR4302540.5415721/1‑94 (MQ=60)
            TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGC                                                                                     <  SRR4302540.2505405/94‑1 (MQ=60)
            TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGC                                                                                     <  SRR4302540.2505404/94‑1 (MQ=60)
              AAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCG                                                                                   >  SRR4302540.3999822/1‑94 (MQ=60)
              AAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCG                                                                                   >  SRR4302540.9556104/1‑94 (MQ=60)
               AATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGG                                                                                  >  SRR4302540.242666/1‑94 (MQ=60)
                ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGG                                                                                 >  SRR4302540.2829962/1‑94 (MQ=60)
                ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGG                                                                                 >  SRR4302540.9576827/1‑94 (MQ=60)
                   AACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATG                                                                              >  SRR4302540.9898542/1‑94 (MQ=60)
                    ACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGGAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG                                                                             <  SRR4302540.6053613/94‑1 (MQ=60)
                    ACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG                                                                             <  SRR4302540.8142729/94‑1 (MQ=60)
                     CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGT                                                                            >  SRR4302540.7654051/1‑94 (MQ=60)
                     CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGT                                                                            >  SRR4302540.4925623/1‑94 (MQ=60)
                     CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGT                                                                            >  SRR4302540.4093296/1‑94 (MQ=60)
                       AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTT                                                                          <  SRR4302540.6864393/94‑1 (MQ=60)
                       AAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTT                                                                          <  SRR4302540.3508024/94‑1 (MQ=60)
                         ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgt                                                                        <  SRR4302540.2100435/94‑3 (MQ=60)
                         ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgt                                                                        >  SRR4302540.10043965/1‑92 (MQ=60)
                          TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgta                                                                       >  SRR4302540.9521856/1‑91 (MQ=60)
                          TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgta                                                                       >  SRR4302540.4528083/1‑91 (MQ=60)
                           CCACCGGAAAATTTACGTATAGCAGTAGAACACTTTGGGTGGAAGCATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtat                                                                      <  SRR4302540.9085349/94‑5 (MQ=60)
                           CCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtat                                                                      >  SRR4302540.8122066/1‑90 (MQ=60)
                           CCACCGGAAAATTTACGGATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtat                                                                      <  SRR4302540.9844994/94‑5 (MQ=60)
                            CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatt                                                                     >  SRR4302540.5749619/1‑89 (MQ=60)
                            CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatt                                                                     <  SRR4302540.7597663/94‑6 (MQ=60)
                             ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtattt                                                                    <  SRR4302540.5668764/94‑7 (MQ=60)
                             ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtattt                                                                    <  SRR4302540.2546609/94‑7 (MQ=60)
                             ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtattt                                                                    >  SRR4302540.8308136/1‑88 (MQ=60)
                              CCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttc                                                                   >  SRR4302540.6503571/1‑87 (MQ=60)
                                GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccc                                                                 >  SRR4302540.202064/1‑85 (MQ=60)
                                GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccc                                                                 >  SRR4302540.1417605/1‑85 (MQ=60)
                                 GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccg                                                                <  SRR4302540.318128/94‑11 (MQ=60)
                                 GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccg                                                                <  SRR4302540.9350031/94‑11 (MQ=60)
                                 GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccg                                                                <  SRR4302540.1154514/94‑11 (MQ=60)
                                 GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccg                                                                <  SRR4302540.6984404/94‑11 (MQ=60)
                                  AAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccgg                                                               >  SRR4302540.8145187/1‑83 (MQ=60)
                                  AAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccgg                                                               >  SRR4302540.5781763/1‑83 (MQ=60)
                                   AAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggc                                                              >  SRR4302540.8728985/1‑82 (MQ=60)
                                     ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                            >  SRR4302540.9957937/1‑80 (MQ=60)
                                     ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                            >  SRR4302540.3880960/1‑80 (MQ=60)
                                     ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcat                                                            >  SRR4302540.9569767/1‑80 (MQ=60)
                                       TTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatct                                                          <  SRR4302540.4047733/94‑17 (MQ=60)
                                       TTACGTATAGCAATAGAACACTGTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatct                                                          <  SRR4302540.4047732/94‑17 (MQ=60)
                                        TACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt                                                         <  SRR4302540.6556160/94‑18 (MQ=60)
                                         ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt                                                        >  SRR4302540.2180264/1‑76 (MQ=60)
                                         ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt                                                        <  SRR4302540.3560697/94‑19 (MQ=60)
                                         ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt                                                        >  SRR4302540.7767180/1‑76 (MQ=60)
                                           GTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                                      >  SRR4302540.6584972/1‑74 (MQ=60)
                                           GTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                                      >  SRR4302540.9449461/1‑74 (MQ=60)
                                           GTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                                      <  SRR4302540.3974381/94‑21 (MQ=60)
                                           GTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat                                                      >  SRR4302540.1969818/1‑74 (MQ=60)
                                            TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata                                                     >  SRR4302540.507844/1‑73 (MQ=60)
                                            TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata                                                     <  SRR4302540.8547202/94‑22 (MQ=60)
                                            TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata                                                     >  SRR4302540.233172/1‑73 (MQ=60)
                                            TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata                                                     <  SRR4302540.2675440/94‑22 (MQ=60)
                                             ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttccctgcatctttatag                                                    >  SRR4302540.3679633/1‑72 (MQ=60)
                                             ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                                    <  SRR4302540.4173819/94‑23 (MQ=60)
                                             ATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                                    >  SRR4302540.3554942/1‑72 (MQ=60)
                                             ATAGCAATAGAACACTTTGGGAGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatag                                                    >  SRR4302540.4995158/1‑72 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   <  SRR4302540.9079138/94‑24 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   <  SRR4302540.9282515/94‑24 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   >  SRR4302540.788894/1‑71 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   <  SRR4302540.8938762/94‑24 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   >  SRR4302540.7106368/1‑71 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   >  SRR4302540.6299054/1‑71 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   <  SRR4302540.78014/94‑24 (MQ=60)
                                              TAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGACGCCGGGATGGTTTgtatttcccggcatctttatagc                                                   <  SRR4302540.4154683/94‑24 (MQ=60)
                                               AGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg                                                  >  SRR4302540.6495894/1‑70 (MQ=60)
                                                GCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTttatttcccggactctttatagcga                                                 >  SRR4302540.7868101/1‑69 (MQ=60)
                                                 CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat                                                <  SRR4302540.5953728/94‑27 (MQ=60)
                                                 CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatctcccggcatctttatagcgat                                                <  SRR4302540.6588500/94‑27 (MQ=60)
                                                 CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAACGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat                                                <  SRR4302540.98294/94‑27 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgctag                                              >  SRR4302540.8164172/1‑66 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                              >  SRR4302540.6124380/1‑66 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                              >  SRR4302540.9104379/1‑66 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                              >  SRR4302540.9612635/1‑66 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                              <  SRR4302540.10074025/94‑29 (MQ=60)
                                                   ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag                                              >  SRR4302540.9612634/1‑66 (MQ=60)
                                                    TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc                                             >  SRR4302540.89011/1‑65 (MQ=60)
                                                    TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc                                             >  SRR4302540.4790165/1‑65 (MQ=60)
                                                    TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc                                             >  SRR4302540.3971477/1‑65 (MQ=60)
                                                       AACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                                          >  SRR4302540.10035271/1‑62 (MQ=60)
                                                       AACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                                          <  SRR4302540.3290821/94‑33 (MQ=60)
                                                       AACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                                          >  SRR4302540.2757461/1‑62 (MQ=60)
                                                       AACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                                          >  SRR4302540.2717259/1‑62 (MQ=60)
                                                       AACACTTGTGGTGCAAGAATAGACCTATCACTGCAT‑AAGATAATGTGGTGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaat                                          <  SRR4302540.3290820/94‑33 (MQ=35)
                                                        ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt                                         >  SRR4302540.4710683/1‑61 (MQ=60)
                                                        ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt                                         >  SRR4302540.7240219/1‑61 (MQ=60)
                                                         CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta                                        <  SRR4302540.1055226/94‑35 (MQ=60)
                                                         CACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatta                                        <  SRR4302540.5259657/94‑35 (MQ=60)
                                                          ACTTTGGGTGGAAGAATAGTCCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat                                       <  SRR4302540.1127931/94‑36 (MQ=60)
                                                           CTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt                                      >  SRR4302540.9053846/1‑58 (MQ=60)
                                                            TTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattt                                     <  SRR4302540.4752723/94‑38 (MQ=60)
                                                            TTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattt                                     <  SRR4302540.4532638/94‑38 (MQ=60)
                                                            TTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattt                                     <  SRR4302540.9463181/94‑38 (MQ=60)
                                                             TTGGGTGGAAGAATAGACCTAACACTGCATAAA‑ATAATATGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattta                                    >  SRR4302540.6250929/1‑56 (MQ=49)
                                                              TGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac                                   <  SRR4302540.6691615/94‑40 (MQ=60)
                                                               GGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact                                  >  SRR4302540.5204766/1‑54 (MQ=60)
                                                               GGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact                                  <  SRR4302540.1857857/94‑41 (MQ=60)
                                                               GGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact                                  <  SRR4302540.9358466/94‑41 (MQ=60)
                                                                GGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg                                 <  SRR4302540.5038568/94‑42 (MQ=60)
                                                                GGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg                                 <  SRR4302540.2827771/94‑42 (MQ=60)
                                                                GCTGGAATAATAGACCTATCACGGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg                                 <  SRR4302540.9157994/94‑42 (MQ=35)
                                                                 GTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga                                >  SRR4302540.6911907/1‑52 (MQ=60)
                                                                 GTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga                                <  SRR4302540.4202080/94‑43 (MQ=60)
                                                                 GTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga                                <  SRR4302540.3429594/94‑43 (MQ=60)
                                                                  TGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag                               >  SRR4302540.2140264/1‑51 (MQ=60)
                                                                   GGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt                              <  SRR4302540.6733097/94‑45 (MQ=60)
                                                                    GAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtg                             <  SRR4302540.8409268/94‑46 (MQ=60)
                                                                    GAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtg                             <  SRR4302540.8409267/94‑46 (MQ=60)
                                                                     AAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt                            <  SRR4302540.3610052/94‑47 (MQ=60)
                                                                     AAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt                            <  SRR4302540.9762510/94‑47 (MQ=60)
                                                                      AGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc                           <  SRR4302540.5968095/94‑48 (MQ=60)
                                                                      AGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc                           >  SRR4302540.9564309/1‑47 (MQ=60)
                                                                      AGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc                           <  SRR4302540.2812282/94‑48 (MQ=60)
                                                                       GAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg                          <  SRR4302540.9531578/94‑49 (MQ=60)
                                                                       GAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg                          <  SRR4302540.3257014/94‑49 (MQ=60)
                                                                       GAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg                          >  SRR4302540.9041878/1‑46 (MQ=60)
                                                                       GAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg                          >  SRR4302540.8529088/1‑46 (MQ=60)
                                                                        AATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgc                         >  SRR4302540.10133077/1‑45 (MQ=60)
                                                                        AATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgc                         >  SRR4302540.2186893/1‑45 (MQ=60)
                                                                         ATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcg                        >  SRR4302540.7513697/1‑44 (MQ=60)
                                                                           AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac                      <  SRR4302540.6307238/94‑53 (MQ=60)
                                                                           AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac                      >  SRR4302540.3316593/1‑42 (MQ=60)
                                                                            GACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACC                    <  SRR4302540.5321681/94‑1 (MQ=21)
                                                                            GACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACC                    >  SRR4302540.4991003/1‑94 (MQ=21)
                                                                             ACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCA                   <  SRR4302540.4338892/94‑1 (MQ=19)
                                                                              CCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT                  >  SRR4302540.9161752/1‑94 (MQ=18)
                                                                              CCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT                  >  SRR4302540.506075/1‑94 (MQ=18)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagccatagcaattatttactgagtgtcgcgcccatc                  >  SRR4302540.1476521/1‑38 (MQ=56)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 <  SRR4302540.8161739/94‑1 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 <  SRR4302540.592258/94‑1 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.3718382/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.798401/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.2028219/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.148963/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.1476522/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.8591999/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.8493199/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC                 >  SRR4302540.8324768/1‑94 (MQ=16)
                                                                               CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATC                 >  SRR4302540.2048714/1‑94 (MQ=23)
                                                                                     CTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT           >  SRR4302540.1926329/1‑94 (MQ=16)
                                                                                     CTGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT           >  SRR4302540.4032074/1‑94 (MQ=16)
                                                                                      TGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTT          >  SRR4302540.8028560/1‑94 (MQ=18)
                                                                                      TGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTT          >  SRR4302540.4263756/1‑94 (MQ=18)
                                                                                      TGCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTT          <  SRR4302540.5324403/94‑1 (MQ=18)
                                                                                       GCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT         <  SRR4302540.5305191/94‑1 (MQ=19)
                                                                                       GCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT         <  SRR4302540.8457007/94‑1 (MQ=19)
                                                                                       GCATAAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTT         <  SRR4302540.5082988/94‑1 (MQ=19)
                                                                                          taAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT      >  SRR4302540.4784050/3‑94 (MQ=25)
                                                                                          taAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT      <  SRR4302540.4414101/92‑1 (MQ=25)
                                                                                          taAA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT      >  SRR4302540.7621205/3‑94 (MQ=25)
                                                                                          A‑AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATA     <  SRR4302540.2520939/94‑1 (MQ=26)
                                                                                            AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG    <  SRR4302540.5675654/94‑1 (MQ=28)
                                                                                            AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG    <  SRR4302540.5278586/94‑1 (MQ=28)
                                                                                            AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG    <  SRR4302540.1329158/94‑1 (MQ=28)
                                                                                            AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG    <  SRR4302540.1329157/94‑1 (MQ=28)
                                                                                            AA‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG    <  SRR4302540.9942271/94‑1 (MQ=28)
                                                                                             A‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT   <  SRR4302540.4807048/94‑1 (MQ=28)
                                                                                             A‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT   <  SRR4302540.3314596/94‑1 (MQ=28)
                                                                                             A‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT   >  SRR4302540.3055062/1‑94 (MQ=28)
                                                                                             A‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT   <  SRR4302540.8123676/94‑1 (MQ=28)
                                                                                             A‑ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT   <  SRR4302540.7159051/94‑1 (MQ=28)
                                                                                               ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA  <  SRR4302540.8363711/94‑1 (MQ=28)
                                                                                               ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA  <  SRR4302540.2228840/94‑1 (MQ=28)
                                                                                               |                                                                                              
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA  >  NC_000913/4474733‑4474909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑