Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,474,826 |
+A |
intergenic (+1/+44) |
yjgL → / ← argI |
hypothetical protein/ornithine carbamoyltransferase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,474,823 | 1 | . | A | 99.5%
| 708.8
/ ‑3.7
| 189 | coding (1849/1851 nt) | yjgL | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base A (113/75); total (114/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.21e-01 |
Only 100 of 202 total aligned reads displayed.
TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑A‑AATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT > NC_000913/4474731‑4474910
|
aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑a‑a > 2:5681232/1‑93 (MQ=255)
aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑a‑a > 2:4759330/1‑93 (MQ=255)
aaTGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATAACTGCat‑a‑a > 2:1827695/1‑93 (MQ=255)
aCAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCat‑a‑aaataa > 2:801012/1‑89 (MQ=255)
aGCGTTTAAATAAACTAAATCCTCCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAAtg < 2:5772811/93‑1 (MQ=255)
aGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAAtg < 1:4236265/93‑1 (MQ=255)
gCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAAtgt > 2:1424382/1‑93 (MQ=255)
cGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAAtgtg > 1:6131420/1‑93 (MQ=255)
cGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAAtgtg > 1:1626061/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGa > 1:1426005/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGa > 2:253061/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGa > 2:2914406/1‑93 (MQ=255)
gTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGa > 1:3044535/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGAt < 1:819455/93‑1 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGAt > 1:3858957/1‑93 (MQ=255)
tttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGAt > 2:447948/1‑93 (MQ=255)
ttAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATg > 2:5022455/1‑93 (MQ=255)
taaataaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGc > 2:6253102/1‑93 (MQ=255)
taaaCTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCggg > 1:1390378/1‑93 (MQ=255)
cTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATgg < 2:4276029/93‑1 (MQ=255)
tAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGt > 1:6250025/1‑93 (MQ=255)
tAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGt < 1:4354615/93‑1 (MQ=255)
tCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgt > 1:4654216‑M1/1‑91 (MQ=255)
ccACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgta > 1:2387039‑M1/1‑90 (MQ=255)
ccACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgta > 1:5368782‑M1/1‑90 (MQ=255)
cACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtat < 1:4817115‑M1/93‑5 (MQ=255)
cACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtat > 2:3749439‑M1/1‑89 (MQ=255)
aCCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatt < 1:5121459‑M1/93‑6 (MQ=255)
ggAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcc < 1:6188448‑M1/93‑9 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttccc > 1:1874019‑M1/1‑84 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttccc < 1:3451470‑M1/93‑10 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttccc > 1:1908403‑M1/1‑84 (MQ=255)
gAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttccc < 1:2939848‑M1/93‑10 (MQ=255)
aaaaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccg < 2:1877398‑M1/93‑11 (MQ=255)
aaTTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggc < 1:6267432‑M1/93‑13 (MQ=255)
tttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcat > 1:4429171‑M1/1‑79 (MQ=255)
ttACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatc > 2:3085510‑M1/1‑78 (MQ=255)
tACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatct > 1:2042671‑M1/1‑77 (MQ=255)
tACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatct < 1:5864078‑M1/93‑17 (MQ=255)
aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > 2:4417342‑M1/1‑76 (MQ=255)
aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > 1:5151736‑M1/1‑76 (MQ=255)
aCGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt < 1:4759330‑M1/93‑18 (MQ=255)
gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > 2:5268792‑M1/1‑74 (MQ=255)
gTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta < 1:5730937‑M1/93‑20 (MQ=255)
ataGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > 1:352271‑M1/1‑72 (MQ=255)
aGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagc > 2:1291615‑M1/1‑70 (MQ=255)
gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg < 1:5476236‑M1/93‑25 (MQ=255)
gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg > 2:3992435‑M1/1‑69 (MQ=255)
gCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg > 2:4247583‑M1/1‑69 (MQ=255)
cAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga < 2:5049414‑M1/93‑26 (MQ=255)
cAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga < 2:1093536‑M1/93‑26 (MQ=255)
cAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga > 1:3298950‑M1/1‑68 (MQ=255)
aaTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat < 1:4944815‑M1/93‑27 (MQ=255)
aaTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagagat > 2:3108042‑M1/1‑67 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > 2:3019429‑M1/1‑66 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < 1:6072187‑M1/93‑28 (MQ=255)
aTAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > 1:12057‑M1/1‑66 (MQ=255)
aGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > 1:2584624‑M1/1‑64 (MQ=255)
gAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca > 1:2812936‑M1/1‑63 (MQ=255)
aaCACTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaa < 2:3291175‑M1/93‑32 (MQ=255)
cacTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > 1:453326‑M1/1‑60 (MQ=255)
cTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat < 2:3254223‑M1/93‑36 (MQ=255)
cTTTGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat > 1:1566235‑M1/1‑58 (MQ=255)
tttGGGTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatt > 2:2209688‑M1/1‑57 (MQ=255)
gggTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > 2:1678804‑M1/1‑54 (MQ=255)
gggTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac < 1:567675‑M1/93‑40 (MQ=255)
ggTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < 1:2367125‑M1/93‑41 (MQ=255)
gTGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg < 1:5217927‑M1/93‑42 (MQ=255)
tGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > 1:5769616‑M1/1‑51 (MQ=255)
tGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > 1:4140364‑M1/1‑51 (MQ=255)
tGGAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < 1:3985816‑M1/93‑43 (MQ=255)
ggAAGAATAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < 1:253125‑M1/93‑44 (MQ=255)
gaagaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt > 1:4633476‑M1/1‑49 (MQ=255)
aagaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtg < 1:1099085‑M1/93‑46 (MQ=255)
agaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt > 2:3480821‑M1/1‑47 (MQ=255)
agaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt < 1:2656261‑M1/93‑47 (MQ=255)
agaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt < 1:2546745‑M1/93‑47 (MQ=255)
agaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt < 2:5479762‑M1/93‑47 (MQ=255)
gaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc < 2:4453000‑M1/93‑48 (MQ=255)
gaaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc > 2:1774525‑M1/1‑46 (MQ=255)
aaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg > 2:2350620‑M1/1‑45 (MQ=255)
aaTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcg > 2:4361207‑M1/1‑45 (MQ=255)
aTAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgc < 2:5368782‑M1/93‑50 (MQ=255)
tAGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcg > 1:5005995‑M1/1‑43 (MQ=255)
aGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcga < 1:333980‑M1/93‑52 (MQ=255)
aGACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcga < 2:646593‑M1/93‑52 (MQ=255)
gACCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac < 2:2117719‑M1/93‑53 (MQ=255)
aCCTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgacc < 1:3790670‑M1/93‑54 (MQ=255)
cTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat < 1:1087848‑M1/93‑56 (MQ=255)
cTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat > 2:1722333‑M1/1‑38 (MQ=255)
cTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat > 1:5598209‑M1/1‑38 (MQ=255)
cTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat < 2:4487617‑M1/93‑56 (MQ=255)
cTATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccat > 1:3168479‑M1/1‑38 (MQ=255)
tATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc > 2:210086‑M1/1‑37 (MQ=255)
tATCACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatc > 2:5918926‑M1/1‑37 (MQ=255)
cACTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcacc > 2:3187548‑M1/1‑34 (MQ=255)
aCTGCAT‑AGAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcaccg > 2:6136611‑M1/1‑33 (MQ=255)
cTGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcaccgc > 1:1924148‑M1/1‑32 (MQ=255)
tGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcaccgct > 2:4985706‑M1/1‑31 (MQ=255)
tGCATAA‑AATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgaccatcaccgct > 1:1190270‑M1/1‑31 (MQ=255)
|
TTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑A‑AATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT > NC_000913/4474731‑4474910
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA > NC_000913/4474733‑4474909
|
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAA > SRR4302533.384195/1‑94 (MQ=60)
ATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAAA > SRR4302533.2603714/1‑94 (MQ=60)
ACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAAT < SRR4302533.4274692/94‑1 (MQ=60)
CAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATG > SRR4302533.2581767/1‑94 (MQ=60)
AGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGT < SRR4302533.1212520/94‑1 (MQ=60)
AGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGT < SRR4302533.4261855/94‑1 (MQ=60)
AGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGT > SRR4302533.573687/1‑94 (MQ=60)
GCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTG > SRR4302533.6168364/1‑94 (MQ=60)
GCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTG > SRR4302533.1635910/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGA > SRR4302533.3063170/1‑94 (MQ=60)
CGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGA > SRR4302533.1434626/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT > SRR4302533.1097401/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < SRR4302533.3197691/94‑1 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT > SRR4302533.3882517/1‑94 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < SRR4302533.4851144/94‑1 (MQ=60)
GTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < SRR4302533.6020790/94‑1 (MQ=60)
TTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATG < SRR4302533.824259/94‑1 (MQ=60)
TTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGC < SRR4302533.2947935/94‑1 (MQ=60)
AAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCG > SRR4302533.1169442/1‑94 (MQ=60)
ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGG > SRR4302533.5239696/1‑94 (MQ=60)
ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGG > SRR4302533.5867817/1‑94 (MQ=60)
ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGG < SRR4302533.4816820/94‑1 (MQ=60)
ATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGG > SRR4302533.1398752/1‑94 (MQ=60)
TAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGA > SRR4302533.1913929/1‑94 (MQ=60)
AAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAT > SRR4302533.4532125/1‑94 (MQ=60)
AACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATG < SRR4302533.79631/94‑1 (MQ=60)
CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGT > SRR4302533.6287418/1‑94 (MQ=60)
CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGT > SRR4302533.3508106/1‑94 (MQ=60)
CTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTAGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGT < SRR4302533.3805280/94‑1 (MQ=60)
TAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTT < SRR4302533.4380898/94‑1 (MQ=60)
ATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgt > SRR4302533.4682419/1‑92 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgta > SRR4302533.2401788/1‑91 (MQ=60)
TCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgta > SRR4302533.5401032/1‑91 (MQ=60)
CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatt > SRR4302533.4455279/1‑89 (MQ=60)
CACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatt < SRR4302533.4846311/94‑6 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtattt > SRR4302533.4221439/1‑88 (MQ=60)
ACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtattt < SRR4302533.5152402/94‑7 (MQ=60)
CCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttc > SRR4302533.6139625/1‑87 (MQ=60)
CCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttc > SRR4302533.5779898/1‑87 (MQ=60)
CGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcc < SRR4302533.4097960/94‑9 (MQ=60)
CGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcc > SRR4302533.5703007/1‑86 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttccc < SRR4302533.6225588/94‑10 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302533.1920043/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttccc > SRR4302533.1885439/1‑85 (MQ=60)
GGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttccc < SRR4302533.5911865/94‑10 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302533.6241641/94‑11 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302533.3472780/94‑11 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302533.2957807/94‑11 (MQ=60)
GAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccg < SRR4302533.2425966/94‑11 (MQ=60)
AAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggc > SRR4302533.6214306/1‑82 (MQ=60)
AATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggca < SRR4302533.6304880/94‑14 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302533.195240/1‑80 (MQ=60)
ATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcat > SRR4302533.4455946/1‑80 (MQ=60)
TTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatc > SRR4302533.1534027/1‑79 (MQ=60)
TTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatct > SRR4302533.2055265/1‑78 (MQ=60)
TACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt < SRR4302533.5899532/94‑18 (MQ=60)
TACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctt > SRR4302533.5182855/1‑77 (MQ=60)
ACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttt < SRR4302533.4788201/94‑19 (MQ=60)
CGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatcttta > SRR4302533.5506925/1‑75 (MQ=60)
GTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttat < SRR4302533.5765539/94‑21 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302533.354421/1‑73 (MQ=60)
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttata > SRR4302533.2773138/1‑73 (MQ=60)
AGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcg < SRR4302533.5177896/94‑25 (MQ=60)
GCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga > SRR4302533.3319306/1‑69 (MQ=60)
GCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcga < SRR4302533.5509246/94‑26 (MQ=60)
CAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgat > SRR4302533.4787397/1‑68 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata > SRR4302533.12151/1‑67 (MQ=60)
AATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgata < SRR4302533.4974743/94‑28 (MQ=60)
ATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatag < SRR4302533.6108922/94‑29 (MQ=60)
TAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagc > SRR4302533.2600516/1‑65 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca > SRR4302533.2830250/1‑64 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca > SRR4302533.6296949/1‑64 (MQ=60)
AGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagca > SRR4302533.3357288/1‑64 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt < SRR4302533.1343382/94‑34 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > SRR4302533.456037/1‑61 (MQ=60)
ACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaatt > SRR4302533.1667996/1‑61 (MQ=60)
ACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattat > SRR4302533.1575666/1‑59 (MQ=60)
TTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattt < SRR4302533.509198/94‑38 (MQ=60)
TTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattattta < SRR4302533.92196/94‑39 (MQ=60)
TGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac > SRR4302533.3060026/1‑55 (MQ=60)
TGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttac < SRR4302533.2391983/94‑40 (MQ=60)
GGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttact < SRR4302533.571035/94‑41 (MQ=60)
GGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactg < SRR4302533.2381768/94‑42 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > SRR4302533.5804450/1‑52 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga < SRR4302533.5249337/94‑43 (MQ=60)
GTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactga > SRR4302533.4165474/1‑52 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < SRR4302533.4587019/94‑44 (MQ=60)
TGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgag < SRR4302533.4010090/94‑44 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt < SRR4302533.1930480/94‑45 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt < SRR4302533.5270002/94‑45 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt > SRR4302533.4661554/1‑50 (MQ=60)
GGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagt < SRR4302533.254679/94‑45 (MQ=60)
GAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgataccaattatttactgagtg < SRR4302533.256027/94‑46 (MQ=60)
AAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt > SRR4302533.3174012/1‑48 (MQ=60)
AAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgt < SRR4302533.1105599/94‑47 (MQ=60)
AGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc < SRR4302533.2672576/94‑48 (MQ=60)
AGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtc < SRR4302533.2562415/94‑48 (MQ=60)
ATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcg > SRR4302533.5036331/1‑44 (MQ=60)
AGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac < SRR4302533.336023/94‑53 (MQ=60)
AGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac > SRR4302533.4975659/1‑42 (MQ=60)
AGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTgtatttcccggcatctttatagcgatagcaattatttactgagtgtcgcgac < SRR4302533.3987485/94‑53 (MQ=60)
ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCA < SRR4302533.3813881/94‑1 (MQ=19)
ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCA > SRR4302533.1633318/1‑94 (MQ=19)
CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT > SRR4302533.5632033/1‑94 (MQ=18)
CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT > SRR4302533.3187978/1‑94 (MQ=18)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC < SRR4302533.1094256/94‑1 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302533.1197422/1‑94 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302533.2088223/1‑94 (MQ=16)
CATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTG > SRR4302533.5706532/1‑94 (MQ=21)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG < SRR4302533.6133200/94‑1 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG < SRR4302533.6081766/94‑1 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG > SRR4302533.211499/1‑94 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG > SRR4302533.6296712/1‑94 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT > SRR4302533.318713/1‑94 (MQ=28)
ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA > SRR4302533.1167317/1‑94 (MQ=28)
|
AATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA > NC_000913/4474733‑4474909
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
