Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTGAT > NC_000913/2130154‑2130340
|
GCACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAAC < SRR4302540.6349276/94‑1 (MQ=60)
GCACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAAC < SRR4302540.1047927/94‑1 (MQ=60)
CACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACG < SRR4302540.5711876/94‑1 (MQ=60)
CACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTGGGCACCGAGTTCGACGCCGTTGCCAATA < SRR4302540.8835806/94‑1 (MQ=60)
ACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGG > SRR4302540.497600/1‑94 (MQ=60)
ACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGT > SRR4302540.5134574/1‑94 (MQ=60)
CCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTG > SRR4302540.2160109/1‑94 (MQ=60)
CACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGT > SRR4302540.2275693/1‑94 (MQ=60)
CCGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTG < SRR4302540.7568969/94‑1 (MQ=60)
CGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGG < SRR4302540.2999264/94‑1 (MQ=60)
CGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGG > SRR4302540.10104351/1‑94 (MQ=60)
GCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGA > SRR4302540.2120130/1‑94 (MQ=60)
gccccggcccgcgtTGACGTTTTTACCAAGCTTGACATCACCAAGAATAAAGACGTTGGCCACGAGTTCGACGCCGTTGCCAACGTGTGGACAT < SRR4302540.976112/80‑1 (MQ=51)
GCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACAT < SRR4302540.5287690/94‑1 (MQ=60)
GCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACAT < SRR4302540.6068333/94‑1 (MQ=60)
GCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACAT < SRR4302540.1003735/94‑1 (MQ=60)
GCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACAT > SRR4302540.2393928/1‑94 (MQ=60)
CGCGCCCACGGTGACGTTGTTACCCAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCC > SRR4302540.6033878/1‑94 (MQ=60)
GCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCA < SRR4302540.9707292/94‑1 (MQ=60)
GCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCA < SRR4302540.9707291/94‑1 (MQ=60)
CGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCAT < SRR4302540.2122213/94‑1 (MQ=60)
GCCCCCGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATG < SRR4302540.8683640/94‑1 (MQ=60)
GCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATG < SRR4302540.6824056/94‑1 (MQ=60)
GCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATG > SRR4302540.3692320/1‑94 (MQ=60)
CCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGT > SRR4302540.7076400/1‑94 (MQ=60)
CCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGT > SRR4302540.10078178/1‑94 (MQ=60)
ACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTAT > SRR4302540.2293036/1‑94 (MQ=60)
CGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTaacc > SRR4302540.1946354/1‑90 (MQ=60)
CGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATC > SRR4302540.4017056/1‑94 (MQ=60)
CGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATC < SRR4302540.395918/94‑1 (MQ=60)
CGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATC < SRR4302540.642492/94‑1 (MQ=60)
CGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATC < SRR4302540.6360865/94‑1 (MQ=60)
GGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCG > SRR4302540.4377280/1‑94 (MQ=60)
GGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCG > SRR4302540.4377282/1‑94 (MQ=60)
GGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCG > SRR4302540.8698653/1‑94 (MQ=60)
GGTGACGTTGTTACAAAGCGTGATATCACCAAGAATAATGGCGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCG < SRR4302540.419657/94‑1 (MQ=60)
GTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGG > SRR4302540.4917682/1‑94 (MQ=60)
GTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGG < SRR4302540.8190563/94‑1 (MQ=60)
GTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGG > SRR4302540.1710952/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGT > SRR4302540.6481429/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGC > SRR4302540.5413810/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGC > SRR4302540.6481430/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGC > SRR4302540.8655910/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGC > SRR4302540.7177996/1‑94 (MQ=60)
TGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGC > SRR4302540.10150386/1‑94 (MQ=60)
CGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACC > SRR4302540.1841154/1‑94 (MQ=60)
CGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACC < SRR4302540.10132000/94‑1 (MQ=60)
GTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCA > SRR4302540.9736825/1‑94 (MQ=60)
GTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCA < SRR4302540.3627143/94‑1 (MQ=60)
TTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCAC < SRR4302540.3011543/94‑1 (MQ=60)
TTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCAC < SRR4302540.6914011/94‑1 (MQ=60)
TTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCAC < SRR4302540.7324421/94‑1 (MQ=60)
TGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACG < SRR4302540.8384987/94‑1 (MQ=60)
TGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACG > SRR4302540.1933733/1‑94 (MQ=60)
GTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGA < SRR4302540.6306474/94‑1 (MQ=60)
TTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGAT < SRR4302540.8331401/94‑1 (MQ=60)
TTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGAT < SRR4302540.4081380/94‑1 (MQ=60)
TTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGAT > SRR4302540.6321364/1‑94 (MQ=60)
TTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGAT > SRR4302540.7579283/1‑94 (MQ=60)
TTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGAT > SRR4302540.8183920/1‑94 (MQ=60)
GTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGAT < SRR4302540.4081378/94‑1 (MQ=60)
TACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATT < SRR4302540.5373299/94‑1 (MQ=60)
ACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTG > SRR4302540.5641204/1‑94 (MQ=60)
ACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCAAGTTCGACGCCGTTGCCAATGTGTGGCCATGCCATGTTATCAGCACCACGATTC > SRR4302540.5660680/1‑94 (MQ=60)
CCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGC < SRR4302540.301012/94‑1 (MQ=60)
CAAGCGTGATATCACCAAGAATAATGACTTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCC < SRR4302540.6619956/94‑1 (MQ=60)
CAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCC < SRR4302540.6549051/94‑1 (MQ=60)
AAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCG > SRR4302540.118720/1‑94 (MQ=60)
AAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCG > SRR4302540.9255282/1‑94 (MQ=60)
AGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGA > SRR4302540.6650024/1‑94 (MQ=60)
AGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGA > SRR4302540.9847852/1‑94 (MQ=60)
GCGTGTGATCACCAAGAATATTGGCGTCGGCACCGAGTTCGACGCCGTTGCCATCGTGTGGGCATGCCATGTTATCGGCACCACGATTGCCGAT < SRR4302540.3902990/94‑1 (MQ=60)
GCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGAT < SRR4302540.5833092/94‑1 (MQ=60)
GCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGAT < SRR4302540.7781386/94‑1 (MQ=60)
CGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATA > SRR4302540.9060116/1‑94 (MQ=60)
GTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAG > SRR4302540.1069421/1‑94 (MQ=60)
TGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGT > SRR4302540.2386622/1‑94 (MQ=60)
TGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGT < SRR4302540.955823/94‑1 (MQ=60)
GATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTG < SRR4302540.1108698/94‑1 (MQ=60)
gtacCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGA < SRR4302540.1675883/90‑1 (MQ=60)
TATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGAC < SRR4302540.9761386/94‑1 (MQ=60)
AATCACCAAGAATAATGCCGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGAC < SRR4302540.2824009/94‑1 (MQ=60)
ATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTCACG < SRR4302540.1663705/94‑1 (MQ=60)
TCACCAAGAATAATGACGTTGGCACCGAGTTCGACGGCGTTGCCAATGCGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGTCGC > SRR4302540.1866150/1‑94 (MQ=60)
CACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCC < SRR4302540.3757720/94‑1 (MQ=60)
CACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCC < SRR4302540.3671567/94‑1 (MQ=60)
CACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCC > SRR4302540.869740/1‑94 (MQ=60)
ACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCG < SRR4302540.3901343/94‑1 (MQ=60)
ACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCG < SRR4302540.9190241/94‑1 (MQ=60)
ACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCG < SRR4302540.5785274/94‑1 (MQ=60)
CCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGT > SRR4302540.5967499/1‑94 (MQ=60)
CCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGT < SRR4302540.2003538/94‑1 (MQ=60)
CAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTG < SRR4302540.3899208/94‑1 (MQ=60)
CAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTG < SRR4302540.8327316/94‑1 (MQ=60)
CAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTG < SRR4302540.4646682/94‑1 (MQ=60)
AGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGC > SRR4302540.4980895/1‑94 (MQ=60)
GAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCG > SRR4302540.3829080/1‑94 (MQ=60)
AATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGA > SRR4302540.9425768/1‑94 (MQ=60)
AATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGA > SRR4302540.3368692/1‑94 (MQ=60)
ATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAT > SRR4302540.10103489/1‑94 (MQ=60)
TAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAAT < SRR4302540.5259280/94‑1 (MQ=60)
TAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATTTTATCGGCACCACGCTTGCCGATAGTGACGCCGTGGGGAAT > SRR4302540.5625367/1‑94 (MQ=60)
TGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGA > SRR4302540.2049532/1‑94 (MQ=60)
GACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTA > SRR4302540.7533613/1‑94 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA > SRR4302540.8605621/1‑94 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA < SRR4302540.4022731/94‑1 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA > SRR4302540.4033030/1‑94 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA > SRR4302540.4679871/1‑94 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA < SRR4302540.5142897/94‑1 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA > SRR4302540.3314153/1‑94 (MQ=60)
CGTTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAA < SRR4302540.8050387/94‑1 (MQ=60)
GTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAA > SRR4302540.1522893/1‑94 (MQ=60)
GTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAA > SRR4302540.6712522/1‑94 (MQ=60)
GTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAA > SRR4302540.8040512/1‑94 (MQ=60)
TTGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAAT < SRR4302540.10089084/94‑1 (MQ=60)
TGGCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATC > SRR4302540.1287779/1‑94 (MQ=60)
GCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCAT < SRR4302540.8537286/94‑1 (MQ=60)
GCACCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCAT < SRR4302540.5891199/94‑1 (MQ=60)
CACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATC > SRR4302540.9803543/1‑94 (MQ=60)
CACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATC > SRR4302540.9803542/1‑94 (MQ=60)
CTGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAAGCATCCC < SRR4302540.8377232/94‑1 (MQ=60)
CCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCC < SRR4302540.8377229/94‑1 (MQ=60)
CCGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCC > SRR4302540.3796824/1‑94 (MQ=60)
CGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCC < SRR4302540.419328/94‑1 (MQ=60)
CGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCC > SRR4302540.9702785/1‑94 (MQ=60)
CGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCC < SRR4302540.7044101/94‑1 (MQ=60)
CGAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCC < SRR4302540.7043956/94‑1 (MQ=60)
GAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCC < SRR4302540.8958979/94‑1 (MQ=60)
GAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCC > SRR4302540.6651642/1‑94 (MQ=60)
GAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCC > SRR4302540.4134811/1‑94 (MQ=60)
GAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCC < SRR4302540.8847947/94‑1 (MQ=60)
AAGTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTAGCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCC < SRR4302540.7109081/94‑1 (MQ=60)
GTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGC > SRR4302540.7989606/1‑94 (MQ=60)
GTTCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGC > SRR4302540.5323861/1‑94 (MQ=60)
TTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCT > SRR4302540.8356018/1‑94 (MQ=60)
TCGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTA < SRR4302540.1593686/94‑1 (MQ=60)
CGACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTAC > SRR4302540.5596354/1‑94 (MQ=60)
GACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACC > SRR4302540.4846019/1‑94 (MQ=60)
ACGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCA > SRR4302540.2401952/1‑94 (MQ=60)
CGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCAC > SRR4302540.5084416/1‑94 (MQ=60)
CGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCAC > SRR4302540.6251367/1‑94 (MQ=60)
CGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCAC < SRR4302540.7885600/94‑1 (MQ=60)
CGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGAAGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCAC < SRR4302540.1791848/94‑1 (MQ=60)
CGCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGCGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCAC < SRR4302540.7885853/94‑1 (MQ=60)
GCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACG < SRR4302540.4638854/94‑1 (MQ=60)
GCCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCAAATGGTAAAATCATCCCCCGCTACCACG < SRR4302540.5922228/94‑1 (MQ=60)
CCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAACATCATCCCCCGCCACCACGT > SRR4302540.8704673/1‑94 (MQ=60)
CCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGT > SRR4302540.9509581/1‑94 (MQ=60)
CCGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGT > SRR4302540.2778604/1‑94 (MQ=60)
CGTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTT > SRR4302540.3956445/1‑94 (MQ=60)
GTTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTT < SRR4302540.8083261/94‑1 (MQ=60)
TTGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTT > SRR4302540.6906283/1‑94 (MQ=60)
TGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTT > SRR4302540.5161994/1‑94 (MQ=60)
TGCCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTT > SRR4302540.3913902/1‑94 (MQ=60)
GCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTA < SRR4302540.9625045/94‑1 (MQ=60)
CCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTAT > SRR4302540.4387497/1‑94 (MQ=60)
CCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTAT < SRR4302540.9251244/94‑1 (MQ=60)
CCAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTAT > SRR4302540.340297/1‑94 (MQ=60)
CAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATT > SRR4302540.6909982/1‑94 (MQ=60)
CAACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATT > SRR4302540.6972181/1‑94 (MQ=60)
AATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTCAAATCATCCCCCGCTACCCCGTTTTTATTG < SRR4302540.9048729/94‑1 (MQ=60)
AACGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTG < SRR4302540.5031532/94‑1 (MQ=60)
ATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTGA > SRR4302540.3442115/1‑94 (MQ=60)
TGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTGAT < SRR4302540.8236752/94‑1 (MQ=60)
TGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTGAT < SRR4302540.3959175/94‑1 (MQ=60)
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GCACCACGCTGCCCGCGCCCACGGTGACGTTGTTACCAAGCGTGATATCACCAAGAATAATGACGTTGGCACCGAGTTCGACGCCGTTGCCAATGTGTGGACATGCCATGTTATCGGCACCACGATTGCCGATAGTGACGCCGTGGCGAATGGTAAAATCATCCCCCGCTACCACGTTTTTATTGAT > NC_000913/2130154‑2130340
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
