Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A0 F0 I1 R1
|
245 |
579.6 |
28867798 |
97.7% |
28203838 |
96.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
4,008,429 |
+TG |
coding (512/516 nt) |
b4555 → |
hypothetical protein |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 4,008,429 | 1 | . | T | 98.5%
| 1011.6
/ 3.6
| 262 | L171W (TTG→TGG) | b4555 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (129/128); minor base G (2/2); total (131/131) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.55e-01 |
* | NC_000913 | 4,008,429 | 2 | . | G | 98.1%
| 1007.7
/ 8.2
| 261 | coding (512/516 nt) | b4555 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (128/128); total (130/131) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01 |
Only 100 of 291 total aligned reads displayed.
CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTAC‑AG‑C‑TGAAGGATT‑G‑ATTGC‑G‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > NC_000913/4008343‑4008522
||
tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 2:2926582/96‑2 (MQ=255)
tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 2:5615949/96‑2 (MQ=255)
tGTCTGGAAGTGATGGCGGGCGGAGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 1:12583935/96‑2 (MQ=255)
gTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttg < 1:9864495/96‑3 (MQ=255)
tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg < 2:9061588/96‑4 (MQ=255)
tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg < 2:8962905/96‑4 (MQ=255)
tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg > 2:7833193/1‑93 (MQ=255)
gTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACggg < 2:10822895/96‑1 (MQ=255)
tGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGa > 2:5270993/1‑96 (MQ=255)
gATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑GCTTG‑GTGACGGGAt < 1:10980536/96‑1 (MQ=255)
gATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AG‑CATGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGAt < 2:10216733/96‑1 (MQ=255)
aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 1:13060395/96‑1 (MQ=255)
aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 1:11708699/96‑1 (MQ=255)
aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 2:161048/96‑1 (MQ=255)
tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGa > 2:4766450/1‑96 (MQ=255)
tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGa > 2:4463195/1‑96 (MQ=255)
ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGACGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGTTGaa > 1:12912062/1‑96 (MQ=255)
ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGaa < 1:13237122/96‑1 (MQ=255)
gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAac < 1:5164257/96‑1 (MQ=255)
gcgggcggCGTTTCAAAAGGACATGCCCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAac < 1:7028547/96‑1 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGCAGGATT‑GTAGTGC‑G‑TTTGGTGACGGGATGAacg > 1:10184571/1‑96 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 2:2577626/96‑1 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 1:13978146/96‑1 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg > 1:13181770/1‑96 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 1:7580615/96‑1 (MQ=255)
cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGA‑G‑TTTGGTGACGGGATGAacg > 2:9604794/1‑96 (MQ=255)
gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:13250770/1‑96 (MQ=255)
gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:10446427/1‑96 (MQ=255)
gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:6681137/1‑96 (MQ=255)
gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 1:6278348/1‑96 (MQ=255)
gggcggCGTTTCAAAACGCCATGAGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga < 1:10357255/96‑1 (MQ=255)
gggcggCGTGTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga < 1:380389/96‑1 (MQ=255)
gtcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac < 1:12859185/94‑1 (MQ=255)
ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAAC‑C‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac < 2:7490016/96‑1 (MQ=255)
ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac > 1:4300846/1‑96 (MQ=255)
gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgacg < 2:12997738/96‑1 (MQ=255)
cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGc < 2:6956805/96‑1 (MQ=255)
ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc > 1:2674379/1‑96 (MQ=255)
ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc > 1:7394350/1‑96 (MQ=255)
ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc < 1:6889931/96‑1 (MQ=255)
ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGATAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc < 1:11448052/96‑1 (MQ=255)
cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGa < 2:11320077/96‑1 (MQ=255)
gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGaa > 1:9484328/1‑96 (MQ=255)
gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGaa > 2:7698105/1‑96 (MQ=255)
ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAAt > 1:3199527/5‑96 (MQ=255)
tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATg > 1:2924063/4‑96 (MQ=255)
aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGca < 1:4128963/95‑2 (MQ=255)
aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt > 1:3482551/2‑96 (MQ=255)
aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt < 2:2208879/95‑1 (MQ=255)
aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt < 1:13381048/95‑1 (MQ=255)
aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGTCTAAATGCTg > 1:4755740/1‑96 (MQ=255)
aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTg < 1:14256729/96‑1 (MQ=255)
aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTg > 1:7888015/1‑96 (MQ=255)
aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGt < 1:4934091/96‑1 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGtt < 1:8861793/96‑2 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 1:3023630/1‑96 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 2:1856400/1‑96 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc < 1:1745716/96‑1 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 1:4364937/1‑96 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 2:8011587/1‑96 (MQ=255)
aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTCACGGGATGAACGACGCCGAAATGCTGTc < 2:13877228/96‑1 (MQ=255)
ggCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCg < 2:8494437/96‑1 (MQ=255)
actgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAg < 2:6198175/92‑1 (MQ=255)
ctgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGt > 1:7196977/4‑96 (MQ=255)
ctgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGt < 2:4202135/93‑1 (MQ=255)
tgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTg > 2:14020536/3‑96 (MQ=255)
tgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTg > 1:1895113/3‑96 (MQ=255)
gggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgc < 2:3477950/95‑2 (MQ=255)
gCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgc < 2:3449894/96‑4 (MQ=255)
cTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgca < 2:4300846/96‑5 (MQ=255)
cTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgca > 2:198723/1‑92 (MQ=255)
tAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTAt > 2:14250077/1‑83 (MQ=255)
cagcc‑TGAAGGATT‑GTATTGCGG‑TTG‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca > 2:1354987/5‑96 (MQ=255)
cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 1:5473224/92‑1 (MQ=255)
cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 1:14422890/92‑1 (MQ=255)
cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 2:3572644/92‑1 (MQ=255)
aagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca > 1:11336053/5‑96 (MQ=255)
agcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAg < 1:9290859/93‑1 (MQ=255)
agcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAg > 1:8056151/4‑96 (MQ=255)
gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc > 2:7169485/3‑96 (MQ=255)
gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc > 2:7100183/3‑96 (MQ=255)
gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc < 2:12303177/94‑1 (MQ=255)
cc‑TGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg > 1:5969647/2‑96 (MQ=255)
cc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg > 1:4988502/2‑96 (MQ=255)
cc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg < 1:13504482/95‑1 (MQ=255)
c‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGt > 2:9355629/1‑96 (MQ=255)
taaaGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 1:10632480/3‑96 (MQ=255)
tGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCC‑GGCAAAGG‑CTGCATTATGGGCAGTGAG‑CACCAGCGTc > 1:10000040/1‑96 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCgcc > 2:5818650/1‑94 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 2:12779655/1‑96 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc < 2:1903279/96‑1 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 1:4647802/1‑96 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGGGCG‑CACCAGCGTc > 1:330447/1‑96 (MQ=255)
tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGC‑GAGGCGCACCAGCggc > 1:6507775/1‑94 (MQ=255)
gAATGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt > 2:10116508/1‑96 (MQ=255)
gAAGGATTGG‑ATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTAGGGGCAGTGCG‑CACCAGCGTCt > 1:7330067/1‑96 (MQ=255)
gAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt < 2:3199527/96‑1 (MQ=255)
gAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt < 2:9543819/96‑1 (MQ=255)
aGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGa > 2:11942376/1‑96 (MQ=255)
t‑‑gtgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAA‑GTCTCCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAg < 2:4064943/96‑1 (MQ=255)
||
CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTAC‑AG‑C‑TGAAGGATT‑G‑ATTGC‑G‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > NC_000913/4008343‑4008522
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
Only 200 of 241 total aligned reads displayed.
GAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GC‑‑TGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑C‑TGAAGGATTG‑ATTGCG‑‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGAA > NC_000913/4008350‑4008527
|
NNNGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGAT < SRR4302518.11741891/101‑1 (MQ=18)
NNNTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATG < SRR4302518.13664866/101‑1 (MQ=17)
NNNTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATG < SRR4302518.12262059/101‑1 (MQ=17)
GTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAA < SRR4302518.4579327/101‑1 (MQ=18)
TGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAAC < SRR4302518.5430644/101‑1 (MQ=18)
TGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAAC < SRR4302518.1641741/101‑1 (MQ=18)
GGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAAC < SRR4302518.4720110/101‑1 (MQ=17)
GATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACG < SRR4302518.2106652/101‑1 (MQ=18)
GATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACG < SRR4302518.4547432/101‑1 (MQ=18)
ATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGA < SRR4302518.7333498/101‑1 (MQ=18)
GGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACG < SRR4302518.1880780/101‑1 (MQ=18)
CGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCC < SRR4302518.3386956/101‑1 (MQ=18)
CGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCC < SRR4302518.7255353/101‑1 (MQ=18)
GGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCG > SRR4302518.6598371/1‑101 (MQ=18)
GCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAA < SRR4302518.738790/101‑1 (MQ=18)
GGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAAT < SRR4302518.1944757/101‑1 (MQ=18)
GGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAAT > SRR4302518.2801977/1‑101 (MQ=18)
CGTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGC > SRR4302518.4500920/1‑101 (MQ=20)
nnntcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCT < SRR4302518.7710979/95‑1 (MQ=23)
nnntcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCT < SRR4302518.13996534/95‑1 (MQ=23)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATNNN > SRR4302518.14587260/1‑101 (MQ=17)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATNNN > SRR4302518.7959043/1‑101 (MQ=17)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATNNN > SRR4302518.11622897/1‑101 (MQ=17)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATNNN > SRR4302518.10207111/1‑101 (MQ=17)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCT > SRR4302518.3639771/1‑101 (MQ=22)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCT > SRR4302518.5282400/1‑101 (MQ=22)
GTTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCA < SRR4302518.4329339/101‑1 (MQ=20)
nnncaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTG < SRR4302518.14914176/96‑1 (MQ=24)
gttcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTG < SRR4302518.3964086/96‑1 (MQ=24)
TTTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTG > SRR4302518.3015330/1‑101 (MQ=23)
nnnaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGT < SRR4302518.12117278/97‑1 (MQ=26)
TTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGT > SRR4302518.3348434/1‑101 (MQ=25)
TTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGT < SRR4302518.5124865/101‑1 (MQ=25)
TTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGT < SRR4302518.5190948/101‑1 (MQ=25)
TTCAAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGT < SRR4302518.5241394/101‑1 (MQ=25)
NNN‑AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCGTCTG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTC < SRR4302518.9885816/101‑1 (MQ=18)
NNN‑AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTT < SRR4302518.9291507/101‑1 (MQ=25)
tcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGTTTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTC > SRR4302518.3061156/4‑101 (MQ=19)
tcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTNNN > SRR4302518.9055649/4‑101 (MQ=22)
tcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTNNN > SRR4302518.14030986/4‑101 (MQ=22)
tcaAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTC < SRR4302518.3146525/98‑1 (MQ=27)
nnntttcaaaaggccatgcgctggaagcagtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATG < SRR4302518.10535739/57‑1 (MQ=27)
caAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCG < SRR4302518.295536/99‑1 (MQ=29)
caAAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAG‑CATGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCG > SRR4302518.2840817/3‑101 (MQ=29)
A‑AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGgcgg > SRR4302518.3644569/1‑97 (MQ=24)
A‑AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTNNN > SRR4302518.13107698/1‑101 (MQ=25)
A‑AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGAAGCCGAAATGCTGTCGA > SRR4302518.2118040/1‑101 (MQ=22)
cgtttcaaaaggccatgcgctggaagcgggggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGC > SRR4302518.3390211/44‑101 (MQ=29)
AAAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCNNN > SRR4302518.8283886/1‑101 (MQ=27)
AAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG < SRR4302518.6669245/101‑1 (MQ=32)
AAGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG < SRR4302518.897486/101‑1 (MQ=32)
AAGGCCATGCGCTGG‑AG‑GCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCGGAAATGCTGTCGATG > SRR4302518.4422904/1‑101 (MQ=23)
AGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG > SRR4302518.4583866/1‑101 (MQ=34)
AGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG > SRR4302518.3165368/1‑101 (MQ=34)
AGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG > SRR4302518.5495458/1‑101 (MQ=34)
AGGCCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG > SRR4302518.110381/1‑101 (MQ=34)
nnnaaaggccatgcgctggaatcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTC < SRR4302518.13406422/62‑1 (MQ=38)
CCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑N‑‑NN > SRR4302518.11275641/1‑101 (MQ=34)
CCATGCGCTGGAAGCGG‑‑TGGCGAAGAAA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑N‑‑NN > SRR4302518.10510098/1‑101 (MQ=34)
CCATGCGCTGGAAGCGG‑‑TGGCG‑‑‑‑AAGCATCTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GG < SRR4302518.7312009/101‑1 (MQ=39)
nnnggccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT < SRR4302518.10859609/65‑1 (MQ=45)
nnnggccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT < SRR4302518.8713515/65‑1 (MQ=45)
nnnggccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAC < SRR4302518.9269653/65‑1 (MQ=42)
nnngccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG < SRR4302518.10829477/66‑1 (MQ=47)
nnngccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATG < SRR4302518.7403012/66‑1 (MQ=47)
aggccatgcgctggaagcggtggcgaagaatctgggatacagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG < SRR4302518.5735726/58‑1 (MQ=53)
gcccatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATNN‑N > SRR4302518.12394668/34‑101 (MQ=43)
nnntgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GG < SRR4302518.8227591/70‑1 (MQ=55)
nnntgcgcgggacgcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GG < SRR4302518.10540020/70‑1 (MQ=55)
ncatgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GN < SRR4302518.3698979/70‑1 (MQ=52)
ccatgcgctggaagcagtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GG < SRR4302518.2496556/70‑1 (MQ=55)
caatgcgatggaagcggtggagaagaatctgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GG < SRR4302518.4192643/70‑1 (MQ=55)
catgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑NNN > SRR4302518.8956223/31‑101 (MQ=49)
catgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG < SRR4302518.5947678/71‑1 (MQ=57)
catgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG < SRR4302518.2792056/71‑1 (MQ=57)
catgcgctggaagcgggggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG > SRR4302518.6021392/31‑101 (MQ=57)
nnncgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑G < SRR4302518.11399308/72‑1 (MQ=56)
atgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GNN‑‑N > SRR4302518.13704374/30‑101 (MQ=51)
atgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑G > SRR4302518.1875309/30‑101 (MQ=56)
atgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑G > SRR4302518.5623195/30‑101 (MQ=56)
atgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCGGTCGATGG‑Cannn > SRR4302518.12476121/30‑97 (MQ=37)
tgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑GA < SRR4302518.5493192/73‑1 (MQ=56)
tgcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑GA < SRR4302518.5161957/73‑1 (MQ=56)
gcgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑NNN > SRR4302518.9735495/28‑101 (MQ=55)
gagctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑NNN > SRR4302518.12239215/28‑101 (MQ=55)
nnntggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaca < SRR4302518.7929711/75‑5 (MQ=57)
cgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA < SRR4302518.1945444/75‑1 (MQ=54)
cgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA < SRR4302518.5176302/75‑1 (MQ=54)
cgctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA < SRR4302518.1568600/75‑1 (MQ=54)
gctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA‑G > SRR4302518.3561432/26‑101 (MQ=53)
gctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA‑G > SRR4302518.605793/26‑101 (MQ=53)
gctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA‑G < SRR4302518.464257/76‑1 (MQ=53)
gctggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgannn > SRR4302518.9466462/26‑96 (MQ=57)
nnngaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaagg < SRR4302518.9205039/77‑7 (MQ=57)
tggaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaannn > SRR4302518.11192794/24‑94 (MQ=57)
nnnagcggtggcgaagaaactgggctactgcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaaggct < SRR4302518.10565195/70‑9 (MQ=60)
gaaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaagnnn > SRR4302518.11809035/23‑93 (MQ=57)
gaagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaaggnnn > SRR4302518.14367837/22‑92 (MQ=57)
gaagcggtgccgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaaggctg < SRR4302518.7039355/80‑10 (MQ=57)
aagcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaaggcnnn > SRR4302518.9398353/21‑91 (MQ=57)
agcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGCCGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCA < SRR4302518.6350775/82‑1 (MQ=38)
agcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCA < SRR4302518.594404/82‑1 (MQ=50)
agcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCA < SRR4302518.5972639/82‑1 (MQ=50)
gcggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaacacggnnn > SRR4302518.10913046/19‑89 (MQ=57)
nnntggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATT < SRR4302518.12103275/84‑1 (MQ=49)
gggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATT < SRR4302518.3986437/84‑1 (MQ=49)
cggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGCTGG‑C‑‑GGGgaaaggctgcnnn > SRR4302518.10129589/18‑88 (MQ=43)
ggtggcgaagaacctgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTA < SRR4302518.63430/85‑1 (MQ=48)
ggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTA < SRR4302518.1136692/85‑1 (MQ=48)
ggtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGCATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTA < SRR4302518.4727505/85‑1 (MQ=37)
nnnacgctcttccgatcttacagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGgaaaggctgcattgt < SRR4302518.14906990/77‑16 (MQ=60)
gtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTAT < SRR4302518.102711/86‑1 (MQ=48)
gtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTAT < SRR4302518.5520491/86‑1 (MQ=48)
gtggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTAT > SRR4302518.6122901/16‑101 (MQ=48)
tggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATG > SRR4302518.2718212/15‑101 (MQ=49)
tggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATG < SRR4302518.4745017/87‑1 (MQ=49)
nnngaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGG < SRR4302518.12185701/88‑1 (MQ=51)
ggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGCTGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGACAG‑G‑CTGCATTATGG < SRR4302518.2649679/88‑1 (MQ=36)
ggcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGG < SRR4302518.1521354/88‑1 (MQ=51)
nnnaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAT‑G‑CTGCATTATGGG < SRR4302518.14526685/89‑1 (MQ=53)
nnnaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGG < SRR4302518.7882123/89‑1 (MQ=53)
gcgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGG > SRR4302518.63966/13‑101 (MQ=53)
nnnagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGC < SRR4302518.10049135/90‑1 (MQ=55)
cgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGgggggaaaggcggagttatgggc > SRR4302518.5659432/12‑78 (MQ=49)
cgaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGC > SRR4302518.2495117/12‑101 (MQ=55)
gaagaaactgggctacagcctggaggattgG‑ATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCG > SRR4302518.1257162/31‑101 (MQ=57)
gaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGT‑C‑‑GGGGAAAG‑G‑CTGCATTATGagaa > SRR4302518.498692/11‑97 (MQ=38)
gaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCA > SRR4302518.1533440/11‑101 (MQ=57)
gaagaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCA > SRR4302518.2738645/11‑101 (MQ=57)
AA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGggcg > SRR4302518.782287/1‑97 (MQ=56)
AA‑‑‑‑CTGGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTNNN > SRR4302518.14097003/1‑101 (MQ=56)
agaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCNNN > SRR4302518.12870259/9‑101 (MQ=53)
gaaccgggccacgagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAAGGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTG < SRR4302518.1485561/85‑1 (MQ=53)
gaaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGtcannn > SRR4302518.8312034/8‑95 (MQ=51)
nnnctgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGC < SRR4302518.8631361/95‑1 (MQ=60)
aaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGC < SRR4302518.7027038/95‑1 (MQ=60)
aaactgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGC > SRR4302518.5804999/7‑101 (MQ=60)
nnntgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcg < SRR4302518.13848542/96‑3 (MQ=60)
ctgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGCAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcgca < SRR4302518.537833/98‑5 (MQ=50)
ctgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcnnn > SRR4302518.7574363/4‑97 (MQ=60)
tgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcgnnn > SRR4302518.10005154/3‑96 (MQ=60)
tgGGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcgcac > SRR4302518.1980913/3‑96 (MQ=60)
nnntacagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCA < SRR4302518.15093088/92‑1 (MQ=60)
GGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcgcannn > SRR4302518.7450506/1‑94 (MQ=60)
GGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCA < SRR4302518.5751923/101‑1 (MQ=58)
GGCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCA < SRR4302518.3297311/101‑1 (MQ=58)
nnnacagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAG < SRR4302518.9739056/93‑1 (MQ=60)
GCTACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAG > SRR4302518.4010129/1‑101 (MQ=56)
nnnagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCG < SRR4302518.14124532/95‑1 (MQ=59)
TACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCG > SRR4302518.461668/1‑101 (MQ=56)
nnngcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGT < SRR4302518.12139774/96‑1 (MQ=60)
ACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CG‑GGG‑‑AAA‑GCCTGCATTATGGGCAGTccgcaccagnnn > SRR4302518.13160693/1‑89 (MQ=58)
ACAGCC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGGCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGT > SRR4302518.4245254/1‑101 (MQ=47)
aagcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCNNN > SRR4302518.11867277/5‑101 (MQ=58)
agcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGNNN > SRR4302518.8457010/4‑101 (MQ=57)
gcC‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGG‑‑AAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGGCTG > SRR4302518.3728394/3‑101 (MQ=57)
C‑C‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGA > SRR4302518.5247632/1‑101 (MQ=60)
C‑C‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGA > SRR4302518.6023663/1‑101 (MQ=60)
C‑C‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCNNN > SRR4302518.14943133/1‑101 (MQ=60)
C‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAA > SRR4302518.4965661/1‑101 (MQ=60)
C‑TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGCGCG‑CACCAGCGTCTNNN > SRR4302518.11911103/1‑101 (MQ=52)
C‑TGAAGGAATGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAA > SRR4302518.6822864/1‑101 (MQ=60)
TGAAGGTTTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑CGGCAAAG‑G‑CTGCATTATGGGCAGTGAG‑CACCAGCGTCTcnnn > SRR4302518.10475560/1‑97 (MQ=45)
TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGNNN > SRR4302518.11363911/1‑101 (MQ=60)
TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGACA > SRR4302518.4892487/1‑101 (MQ=60)
TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAA > SRR4302518.815220/1‑101 (MQ=60)
TGAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGC‑GAGGCGCACCAGCGGCTGAAA > SRR4302518.6841188/1‑101 (MQ=45)
TAAAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGNNN > SRR4302518.11132113/1‑101 (MQ=58)
NNNAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAA < SRR4302518.7731361/101‑1 (MQ=60)
NNNGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAACG < SRR4302518.11600147/101‑1 (MQ=60)
AAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGC > SRR4302518.7334146/1‑101 (MQ=60)
AAGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGA < SRR4302518.2537259/101‑1 (MQ=60)
AGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAANNN > SRR4302518.9625538/1‑101 (MQ=60)
AGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGAC > SRR4302518.1393417/1‑101 (MQ=60)
AGGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGGCTGAAANNN > SRR4302518.13792003/1‑101 (MQ=52)
GGATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACC > SRR4302518.6453715/1‑101 (MQ=60)
GATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGANNN > SRR4302518.9097783/1‑101 (MQ=60)
GATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCT < SRR4302518.1304244/101‑1 (MQ=60)
GATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACAAGCGACTGAAAGACCT > SRR4302518.3925679/1‑101 (MQ=52)
ATTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTT > SRR4302518.1909594/1‑101 (MQ=60)
TTGTATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTC < SRR4302518.5004258/101‑1 (MQ=60)
NNN‑ATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCA < SRR4302518.7735324/101‑1 (MQ=60)
NN‑NTTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCAT < SRR4302518.9074244/101‑1 (MQ=60)
ATTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGGCGATGG‑T‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGAG‑CACCAGCGCCTGAAAGACCTTCANNN > SRR4302518.8900534/1‑101 (MQ=47)
nnncgttTT‑‑GTGACGGGATGAACGACGCCTAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCC < SRR4302518.13856027/94‑1 (MQ=60)
TTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGTG‑CACCAGCGTCTGAAAGACCTTCATNNN > SRR4302518.8598002/1‑101 (MQ=60)
TTGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATNNN > SRR4302518.9733130/1‑101 (MQ=60)
TGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCNNN > SRR4302518.9644620/1‑101 (MQ=60)
TGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.1471827/101‑1 (MQ=60)
TGCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCG < SRR4302518.3326341/101‑1 (MQ=60)
GCG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGG‑‑AAG‑G‑CTGCATTATGTGGAGGGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGG > SRR4302518.5122529/1‑101 (MQ=58)
CG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > SRR4302518.2746015/1‑101 (MQ=60)
CG‑‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGGGCG‑CCCCAGCGTCTGAAAGACCTTCATCCCGGG > SRR4302518.3152411/1‑101 (MQ=60)
CG‑‑TTTGGTGACGCGATGAACGACGCCGAAATGCTGTCGATGGCC‑‑GGG‑‑AAAGG‑CTGCATTATGGGCAGTGGG‑CACCAGCGTCTGAAAGACCTTCATCCCGAG < SRR4302518.4739818/101‑1 (MQ=60)
G‑‑TTG‑GTGAAGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCT < SRR4302518.3894752/101‑1 (MQ=60)
TG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAccnnn > SRR4302518.13795677/1‑96 (MQ=60)
NN‑‑NTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGG < SRR4302518.9158314/101‑1 (MQ=60)
N‑‑NNGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGA < SRR4302518.9556257/101‑1 (MQ=60)
G‑‑GTGACGGGATGATCGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGAAGTGCG‑CACCATCGTCTGAAAGACCTTCATCCCGAGCTGGA < SRR4302518.5008240/101‑1 (MQ=60)
G‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGA > SRR4302518.915496/1‑101 (MQ=60)
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GAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GC‑‑TGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑C‑TGAAGGATTG‑ATTGCG‑‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGAA > NC_000913/4008350‑4008527
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |