Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
245 |
579.6 |
28867798 |
97.7% |
28203838 |
96.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,041,654 |
G→A |
intergenic (+29/‑125) |
dsbA → / → b3861 |
protein disulfide isomerase I/putative GTP‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,041,654 | 0 | G | A | 100.0%
| 1073.3
/ NA
| 269 | intergenic (+29/‑125) | dsbA/b3861 | protein disulfide isomerase I/putative GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (91/178); total (91/178) |
Only 100 of 272 total aligned reads displayed.
GCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑TTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATT > NC_000913/4041561‑4041745
|
cAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAatat < 1:6023714/96‑1 (MQ=255)
aaTATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATAtt < 1:3256399/96‑1 (MQ=255)
atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc > 2:9685557/1‑96 (MQ=255)
atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc < 2:8491029/96‑1 (MQ=255)
atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc < 2:2753383/96‑1 (MQ=255)
atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc < 2:7047989/96‑1 (MQ=255)
atatGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTc < 1:1025454/96‑1 (MQ=255)
atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc > 2:11174701/1‑96 (MQ=255)
atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc < 2:2875773/96‑1 (MQ=255)
atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc < 1:13183741/96‑1 (MQ=255)
atGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAc > 2:11384335/1‑96 (MQ=255)
tGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACg < 1:6151088/96‑1 (MQ=255)
tGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACg < 1:7234826/96‑1 (MQ=255)
ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAATAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAccg < 1:13051773/96‑3 (MQ=255)
ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg < 2:6538523/96‑1 (MQ=255)
ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg < 2:13831429/96‑1 (MQ=255)
ggATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACgg < 1:1380939/96‑1 (MQ=255)
aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc < 2:2007407/96‑1 (MQ=255)
aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc > 1:9625930/1‑96 (MQ=255)
aTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGc < 2:5319547/96‑1 (MQ=255)
tGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑t < 1:1637618/96‑1 (MQ=255)
tGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑t > 2:14212426/1‑96 (MQ=255)
gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt < 1:3503880/96‑1 (MQ=255)
gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt < 2:5622952/96‑1 (MQ=255)
gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt < 1:4527007/96‑1 (MQ=255)
gTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑tt < 1:3533703/96‑1 (MQ=255)
tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt < 1:10920050/96‑1 (MQ=255)
tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt < 2:4219316/96‑1 (MQ=255)
tttttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt < 2:7304132/96‑1 (MQ=255)
tttGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑t < 1:9314709/96‑1 (MQ=255)
tGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttt > 1:8282603/1‑95 (MQ=255)
tGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttt < 2:357956/96‑2 (MQ=255)
gTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttta > 2:10056459/1‑94 (MQ=255)
gTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑ttta > 1:5403274/1‑94 (MQ=255)
ttCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttat < 2:2997538/96‑4 (MQ=255)
ttCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttat < 2:4438683/96‑4 (MQ=255)
tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt > 2:2495940/1‑92 (MQ=255)
tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt < 2:5505913/96‑5 (MQ=255)
tCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑ttt‑t‑tttatt > 1:2983796/1‑92 (MQ=255)
agcagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑Ttattat > 2:8042103/1‑96 (MQ=255)
agcagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑Ttattat > 2:8352201/1‑96 (MQ=255)
cagTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTAttt < 1:6612848/96‑1 (MQ=255)
agTATGCTGGTACAGTGAAATAGCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTta > 1:1963329/1‑96 (MQ=255)
tATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaat < 2:3320274/96‑1 (MQ=255)
aTGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaata > 2:7940139/1‑96 (MQ=255)
aTGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaata < 2:8757800/96‑1 (MQ=255)
tGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTtaataa < 1:4287693/96‑1 (MQ=255)
gCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTaataaa < 2:6239603/96‑1 (MQ=255)
cTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGTGC‑TTT‑TATTATTATTTaataaat > 1:10360744/1‑96 (MQ=255)
tGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTaataaata < 2:12388891/96‑1 (MQ=255)
aTACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatata < 1:12457461/96‑1 (MQ=255)
aTACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatata > 1:12111215/1‑96 (MQ=255)
tACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatataa < 2:6690719/96‑1 (MQ=255)
tACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAataaatataa < 2:12523644/96‑1 (MQ=255)
aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata > 1:2108903/1‑96 (MQ=255)
aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata < 1:13723381/96‑1 (MQ=255)
aGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAAtaaatataaata < 1:9737265/96‑1 (MQ=255)
gTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATAc < 2:1181423/96‑1 (MQ=255)
gTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATAc > 1:7386988/1‑96 (MQ=255)
tGAAAGATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACa < 1:2444093/96‑1 (MQ=255)
atatCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCt > 1:10887204/1‑96 (MQ=255)
atCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGa > 2:11753874/1‑96 (MQ=255)
cTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATa < 1:14016470/96‑1 (MQ=255)
gTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAAt > 1:3755559/1‑96 (MQ=255)
tCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATg < 2:10617945/96‑1 (MQ=255)
tCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATg > 1:1705779/1‑96 (MQ=255)
ccGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGc > 2:3947560/1‑96 (MQ=255)
agaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATc < 1:7982427/96‑1 (MQ=255)
agaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATc > 1:4725318/1‑96 (MQ=255)
gaAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATcc < 1:9248734/96‑1 (MQ=255)
aaaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCt < 1:9991677/96‑1 (MQ=255)
aaaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCt < 2:4702800/96‑1 (MQ=255)
aaaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTg < 2:9096141/96‑1 (MQ=255)
aaaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGc < 1:1512503/96‑1 (MQ=255)
aaaTAATTCAATGTAAATTACATAAATCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGcc < 2:13274111/96‑1 (MQ=255)
aaaTAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGcc < 2:12192136/96‑1 (MQ=255)
aataatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTAATAATGCATCCTGCCg > 1:10485643/1‑96 (MQ=255)
ataatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGc > 1:5436533/1‑96 (MQ=255)
aatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTg < 1:295926/96‑1 (MQ=255)
aatTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTg > 1:11905076/1‑96 (MQ=255)
atTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTgg < 2:1430870/96‑1 (MQ=255)
ttCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGa > 1:5266503/1‑96 (MQ=255)
aaTGTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACat < 2:13725719/96‑1 (MQ=255)
aggTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACatt > 1:14274488/3‑96 (MQ=255)
gTAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACattat < 2:6283855/96‑1 (MQ=255)
tAAATTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACattatt < 2:2342113/96‑1 (MQ=255)
aaTTACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTc < 1:1221252/96‑1 (MQ=255)
ttACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAg > 2:7582611/1‑96 (MQ=255)
tACATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGc < 2:1284566/96‑1 (MQ=255)
aCATAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCa < 2:10887204/96‑1 (MQ=255)
aTAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATa < 1:6807601/96‑1 (MQ=255)
tAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCAtta < 1:10811234/96‑3 (MQ=255)
tAAAGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATaa > 2:11563176/1‑96 (MQ=255)
aaGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGt < 1:12410674/96‑1 (MQ=255)
aGCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTg < 1:14411348/96‑1 (MQ=255)
aGCCCCTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTg < 1:6435378/96‑1 (MQ=255)
gCCCGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTgg < 2:9215993/96‑1 (MQ=255)
cccGTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGa > 2:14355947/1‑96 (MQ=255)
gTGAATATTCACGGGCTTTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGatat < 2:5970852/96‑1 (MQ=255)
gTGAATATTCACGGGC‑TTTGT‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGatat < 1:11602107/96‑1 (MQ=255)
|
GCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑TTT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATT > NC_000913/4041561‑4041745
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑T‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAAGTT > NC_000913/4041557‑4041752
|
ACCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATAT < SRR4302518.6329352/101‑1 (MQ=60)
CCAGCAATATGGATGTTTTTTTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATATAAATTACATAAAGCCCGTGATTATT > SRR4302518.4370814/1‑101 (MQ=60)
CCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATT < SRR4302518.3407716/101‑1 (MQ=60)
NNNCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTC < SRR4302518.9708350/101‑1 (MQ=60)
CAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTC < SRR4302518.3796138/101‑1 (MQ=60)
CAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTC < SRR4302518.1984457/101‑1 (MQ=60)
CAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTC < SRR4302518.1065834/101‑1 (MQ=60)
CGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCA < SRR4302518.6958404/101‑1 (MQ=60)
AGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATNNN > SRR4302518.8397420/1‑101 (MQ=60)
NNNATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAC < SRR4302518.15050252/101‑1 (MQ=60)
NNNATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAC < SRR4302518.13792229/101‑1 (MQ=60)
GCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCAC < SRR4302518.6690650/101‑1 (MQ=60)
NNNTATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACG < SRR4302518.7613284/101‑1 (MQ=60)
CAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACG < SRR4302518.6463972/101‑1 (MQ=60)
NNNATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAATAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACCG < SRR4302518.13655896/101‑1 (MQ=60)
AATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGG > SRR4302518.2196879/1‑101 (MQ=60)
AATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGG < SRR4302518.1438429/101‑1 (MQ=60)
NNNTGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGcc < SRR4302518.12231371/101‑3 (MQ=60)
NNNTGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGG < SRR4302518.14205770/101‑1 (MQ=60)
TATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC > SRR4302518.365589/1‑101 (MQ=60)
NNNGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC < SRR4302518.13711228/101‑1 (MQ=60)
NNNGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T < SRR4302518.12700424/101‑1 (MQ=60)
ATGTATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T < SRR4302518.1709472/101‑1 (MQ=60)
TGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑T < SRR4302518.3666980/101‑1 (MQ=60)
TGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑T < SRR4302518.3698789/101‑1 (MQ=60)
TGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑T < SRR4302518.4764312/101‑1 (MQ=60)
TGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑T < SRR4302518.6635855/101‑1 (MQ=60)
NNNTGTTTTTGTTCAGCAGTATGCTGATCCAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT < SRR4302518.13010873/101‑1 (MQ=60)
NNNTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT < SRR4302518.11431842/101‑1 (MQ=60)
NNNTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT < SRR4302518.12816999/101‑1 (MQ=60)
NNNTGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT < SRR4302518.11268119/101‑1 (MQ=60)
NNNTGTATTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT < SRR4302518.13473485/101‑1 (MQ=60)
GATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T < SRR4302518.3108035/101‑1 (MQ=60)
NNNTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑T < SRR4302518.9764152/101‑1 (MQ=60)
ATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TN‑N‑N > SRR4302518.10090423/1‑101 (MQ=60)
nnncttgatctGCAGTATGATGATACAGTGAAATATCTGTCAGAGAAAAACTCATTCAATGTAAATTACAAAACGCCCGTAAATATTCACGGGCatctttt < SRR4302518.12510039/90‑8 (MQ=44)
caTTTTGTTCAGCAGTATGCTGATACCGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACCTAAAGCCCGTGAATATTCCCGGGC‑T‑TT‑T‑TTT < SRR4302518.1768917/99‑1 (MQ=60)
GTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTT < SRR4302518.504377/101‑1 (MQ=60)
NNNTTGTTCAGCAGTATGCTGAGACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTta < SRR4302518.13249278/101‑3 (MQ=60)
TTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtat < SRR4302518.2811751/101‑4 (MQ=60)
TTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtat < SRR4302518.1099963/101‑4 (MQ=60)
TTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtat > SRR4302518.3588999/1‑98 (MQ=60)
NNNTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtat < SRR4302518.8677197/101‑4 (MQ=60)
TTGTTCAGCAGTATGCTTATACATTGAAATATCTGTCAGAGAAAATATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTA < SRR4302518.581925/101‑1 (MQ=60)
NNNTTCAGCAGTATGCTGATACAATGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGCGC‑T‑TT‑T‑T‑‑TTATTT < SRR4302518.11943087/101‑1 (MQ=60)
TGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtatnnn > SRR4302518.8690764/1‑95 (MQ=60)
GTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATT > SRR4302518.5679364/1‑101 (MQ=60)
GTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGC‑T‑TT‑T‑TTtattnnn > SRR4302518.14354170/1‑94 (MQ=60)
TTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTT < SRR4302518.6953564/101‑1 (MQ=60)
TCAGCAGTATGCTGATACAGTGAAATATCTTTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTA < SRR4302518.6330794/101‑1 (MQ=60)
TCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTA > SRR4302518.3124057/1‑101 (MQ=60)
NNNGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTA < SRR4302518.10151870/101‑1 (MQ=60)
NNNAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAAT < SRR4302518.8770089/101‑1 (MQ=60)
NNNTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAA < SRR4302518.12486357/101‑1 (MQ=60)
CAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAA < SRR4302518.4499935/101‑1 (MQ=60)
NNNATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATACA < SRR4302518.11659368/101‑1 (MQ=60)
AGTATGCTGGTACAGTGAAATAGCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAA > SRR4302518.2053064/1‑101 (MQ=60)
AGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAA > SRR4302518.4840880/1‑101 (MQ=60)
AGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAA < SRR4302518.5376519/101‑1 (MQ=60)
TATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATA < SRR4302518.5564245/101‑1 (MQ=60)
TATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATA < SRR4302518.1507069/101‑1 (MQ=60)
NNNGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATA < SRR4302518.7638623/101‑1 (MQ=60)
ATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATAT < SRR4302518.6949636/101‑1 (MQ=60)
TGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATGAATNNN > SRR4302518.10921018/1‑101 (MQ=60)
NNNTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATA < SRR4302518.13043681/101‑1 (MQ=60)
NNNGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAA < SRR4302518.10429892/101‑1 (MQ=60)
GCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAA > SRR4302518.3189284/1‑101 (MQ=60)
CTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGTGC‑T‑TT‑TATTATTATTTAATAAATATNNN > SRR4302518.10847786/1‑101 (MQ=60)
TGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAAT < SRR4302518.6137119/101‑1 (MQ=60)
TGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAAT < SRR4302518.4678285/101‑1 (MQ=60)
TGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAAT < SRR4302518.5559866/101‑1 (MQ=60)
TGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATGACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAAT > SRR4302518.3962923/1‑101 (MQ=60)
NNNTACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAAT < SRR4302518.11356083/101‑1 (MQ=60)
NNNACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATA < SRR4302518.14351740/101‑1 (MQ=60)
NNNACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATA < SRR4302518.10205017/101‑1 (MQ=60)
ATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAANNN > SRR4302518.12686930/1‑101 (MQ=60)
AGACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAANNN > SRR4302518.7927196/1‑101 (MQ=60)
TACAGTGAAAGATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACA < SRR4302518.2562122/101‑1 (MQ=60)
CAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATT < SRR4302518.6407053/101‑1 (MQ=60)
CAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAAGATTCACGGGC‑TGTT‑T‑TTATTATTTAATAAATATAAATACATT > SRR4302518.4206568/1‑101 (MQ=60)
AGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTC > SRR4302518.5683156/1‑101 (MQ=60)
AGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTC > SRR4302518.2208135/1‑101 (MQ=60)
AGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTC < SRR4302518.2084361/101‑1 (MQ=60)
AGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTC > SRR4302518.4554276/1‑101 (MQ=60)
GTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATNNN > SRR4302518.7769510/1‑101 (MQ=60)
TGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTG > SRR4302518.6040871/1‑101 (MQ=60)
NNNATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATA < SRR4302518.11423344/101‑1 (MQ=60)
NNNATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATA < SRR4302518.8501400/101‑1 (MQ=60)
NNNATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATA < SRR4302518.14657894/101‑1 (MQ=60)
AATATCTGTCCGAGAAAAAATAATTCAATGTCAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGNNN > SRR4302518.12770341/1‑101 (MQ=60)
ATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGANNN > SRR4302518.11397786/1‑101 (MQ=60)
NNNTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATG < SRR4302518.7907353/101‑1 (MQ=60)
ATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATG < SRR4302518.1278539/101‑1 (MQ=60)
TTTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAANNN > SRR4302518.10788649/1‑101 (MQ=60)
TCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAANNN > SRR4302518.14842826/1‑101 (MQ=60)
NNNCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCAT < SRR4302518.14619678/101‑1 (MQ=60)
NNNCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATC < SRR4302518.8380986/101‑1 (MQ=60)
GTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATC > SRR4302518.3932483/1‑101 (MQ=60)
TCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCC > SRR4302518.1781305/1‑101 (MQ=60)
TCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCANNN > SRR4302518.14584860/1‑101 (MQ=60)
NNNGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCC < SRR4302518.9694960/101‑1 (MQ=60)
NNNAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCT < SRR4302518.10466970/101‑1 (MQ=60)
NNNAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCT < SRR4302518.12061440/101‑1 (MQ=60)
CCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCT < SRR4302518.1529309/101‑1 (MQ=60)
CGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTAGTTAATAAATATAAATACATTCTGATAATGCATCCTG > SRR4302518.3770267/1‑101 (MQ=60)
GAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGC < SRR4302518.1577301/101‑1 (MQ=60)
AGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCC > SRR4302518.4973321/1‑101 (MQ=60)
GAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGNNN > SRR4302518.10281024/1‑101 (MQ=60)
AAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCNNN > SRR4302518.7608266/1‑101 (MQ=60)
AAAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCT > SRR4302518.3510317/1‑101 (MQ=60)
NNNATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTG < SRR4302518.11426258/101‑1 (MQ=60)
AAAATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTG < SRR4302518.307911/101‑1 (MQ=60)
AATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTAATAATGCATCCTGCCGCTNNN > SRR4302518.10976447/1‑101 (MQ=60)
ATAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGAC > SRR4302518.5713867/1‑101 (MQ=60)
TAATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACC < SRR4302518.1664005/101‑1 (MQ=60)
NNNTTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACA < SRR4302518.14865685/101‑1 (MQ=60)
NNNTTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACA < SRR4302518.13886971/101‑1 (MQ=60)
AATTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGANNN > SRR4302518.12471949/1‑101 (MQ=60)
TTCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTA > SRR4302518.5537081/1‑101 (MQ=60)
TCAATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTAT > SRR4302518.7277881/1‑101 (MQ=60)
AATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTGTTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTT > SRR4302518.1691740/1‑101 (MQ=60)
ATGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTC < SRR4302518.1270771/101‑1 (MQ=60)
AGGTAAATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATNNN > SRR4302518.14933914/1‑101 (MQ=60)
NNNACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATA < SRR4302518.9586644/101‑1 (MQ=60)
ATTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATA < SRR4302518.7166159/101‑1 (MQ=60)
TTACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAA < SRR4302518.7133924/101‑1 (MQ=60)
NNNCATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATTA < SRR4302518.11318947/101‑1 (MQ=60)
NNNTAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGT < SRR4302518.12995487/101‑1 (MQ=60)
ACATAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGT < SRR4302518.2616214/101‑1 (MQ=60)
NNNAAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTG < SRR4302518.15080646/101‑1 (MQ=60)
CATAAAGCCCCTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTG < SRR4302518.6764406/101‑1 (MQ=60)
AAAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGNNN > SRR4302518.12186690/1‑101 (MQ=60)
AGGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGNNN > SRR4302518.9835089/1‑101 (MQ=60)
AAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATA > SRR4302518.1764516/1‑101 (MQ=60)
AAGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATA < SRR4302518.2340780/101‑1 (MQ=60)
NNNCCGTGAATATTCACGGGC‑T‑TTGT‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATAT < SRR4302518.12148531/101‑1 (MQ=60)
AGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATAT < SRR4302518.3386163/101‑1 (MQ=60)
AGCCCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGANNN > SRR4302518.13697669/1‑101 (MQ=60)
NNNGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTC < SRR4302518.7994386/101‑1 (MQ=60)
CCGTGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATNNN > SRR4302518.9870232/1‑101 (MQ=60)
TGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCANNN > SRR4302518.10118096/1‑101 (MQ=60)
TGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAAG > SRR4302518.2362541/1‑101 (MQ=60)
TGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAAG < SRR4302518.1982327/101‑1 (MQ=60)
TGAATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATAGTCANNN > SRR4302518.10897606/1‑101 (MQ=60)
AATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAANNN > SRR4302518.10178954/1‑101 (MQ=60)
AATATTCACGGGCTT‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAAGTT > SRR4302518.5284965/1‑101 (MQ=60)
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ACCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAATTCAATGTAAATTACATAAAGCCCGTGAGTATTCACGGGC‑T‑TT‑T‑TTATTATTTAATAAATATAAATACATTCTGATAATGCATCCTGCCGCTGGACATTATTTCAGCATAAGTGGATATTCAAAGTT > NC_000913/4041557‑4041752
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
