Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
676,353 |
T→C |
S140S (AGT→AGC) |
ybeR → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 676,353 | 0 | T | C | 100.0%
| 662.7
/ NA
| 202 | S140S (AGT→AGC) | ybeR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/113); total (89/113) |
Only 100 of 204 total aligned reads displayed.
GAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCA > NC_000913/676264‑676442
|
gAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTa < 1:5155814/93‑1 (MQ=255)
gAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTa > 1:2174349/1‑93 (MQ=255)
aGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGAGAAGAAGAAAGCCTATg < 1:4925538/93‑1 (MQ=255)
gggggAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATgg < 2:4163531/93‑1 (MQ=255)
ggggAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGa > 1:854215/1‑93 (MQ=255)
ggAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATc < 2:1173999/93‑1 (MQ=255)
ggAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATc > 2:288659/1‑93 (MQ=255)
gAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATcc > 2:749631/1‑93 (MQ=255)
aaTCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCa < 2:4060842/93‑1 (MQ=255)
tCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGt < 2:5353538/93‑1 (MQ=255)
cAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTc > 2:2788834/1‑93 (MQ=255)
ccTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGTGAAGAAGAAAGCCTATGGATCCAGTCGCGCa > 1:3298386/1‑93 (MQ=255)
ccTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCa > 1:4862298/1‑93 (MQ=255)
ccTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCa < 1:5238670/93‑1 (MQ=255)
ccTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCa < 1:3970999/93‑1 (MQ=255)
ccTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCa < 1:3850817/93‑1 (MQ=255)
cTGGGATTATGTCCGGATGGGGTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAt > 2:3845602/1‑93 (MQ=255)
tGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAtt > 1:67536/1‑93 (MQ=255)
tGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAtt > 2:3964461/1‑93 (MQ=255)
gggATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTc < 2:2403957/93‑1 (MQ=255)
aTTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATc < 2:1330400/93‑1 (MQ=255)
ttATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCt > 2:3600007/1‑93 (MQ=255)
tATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTa < 1:1032414/93‑1 (MQ=255)
aTGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTAc < 2:5299662/93‑1 (MQ=255)
aTGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTAc > 2:1858078/1‑93 (MQ=255)
aTGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTAc < 2:3190585/93‑1 (MQ=255)
tGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACg > 1:5471550/1‑93 (MQ=255)
tGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACg < 2:1693118/93‑1 (MQ=255)
gTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACgg < 2:6068616/93‑1 (MQ=255)
gATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGctct > 2:2726545/1‑93 (MQ=255)
gATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGctct < 2:4364395/93‑1 (MQ=255)
gATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGctct > 2:5054853/1‑93 (MQ=255)
gtGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTa < 1:1151524/92‑1 (MQ=255)
aTGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTa < 1:356186/93‑1 (MQ=255)
aTGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTa > 1:5998076/1‑93 (MQ=255)
tGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAc < 1:519283/93‑1 (MQ=255)
tGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAc < 2:3551076/93‑1 (MQ=255)
tGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAc < 1:1922096/93‑1 (MQ=255)
ggTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGt > 2:2095737/1‑93 (MQ=255)
ggTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGt < 2:4798636/93‑1 (MQ=255)
ttttttAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGtta > 2:1111705/1‑93 (MQ=255)
ttttttAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGtta < 2:1521733/93‑1 (MQ=255)
ttttAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGAATCCAGTCGCGCATTCATCTACGGGCTCTACGttatt < 1:756743/93‑1 (MQ=255)
tttAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGttatta < 2:4560398/93‑1 (MQ=255)
tttAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGttatta < 2:5801736/93‑1 (MQ=255)
tAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATtata < 2:5089332/93‑1 (MQ=255)
tAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATtata < 1:548251/93‑1 (MQ=255)
aaGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAg > 1:577199/1‑93 (MQ=255)
aaGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAg < 2:5566300/93‑1 (MQ=255)
aGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGt < 2:2298649/93‑1 (MQ=255)
gCCGAATGGTCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTa < 2:3038095/93‑1 (MQ=255)
gCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTa < 1:3607956/93‑1 (MQ=255)
cGAATGGGCGTACTTAATAACTGGTTGAGGGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAc > 2:377518/1‑93 (MQ=255)
cGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAc < 1:4694294/93‑1 (MQ=255)
cGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAc > 2:5664792/1‑93 (MQ=255)
cGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAc > 1:1224729/1‑93 (MQ=255)
cGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAc < 1:1719777/93‑1 (MQ=255)
gAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACt < 1:5100342/93‑1 (MQ=255)
aaTGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTg < 1:3789461/93‑1 (MQ=255)
aaTGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTg > 2:2520520/1‑93 (MQ=255)
tGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTggc > 1:2694546/1‑93 (MQ=255)
tGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTggc < 2:3334483/93‑1 (MQ=255)
gTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCaa < 1:301382/93‑1 (MQ=255)
gTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCaa > 1:2325670/1‑93 (MQ=255)
gTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCaa > 2:1911674/1‑93 (MQ=255)
tACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAAt > 2:322769/1‑93 (MQ=255)
tACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAAt > 1:214134/1‑93 (MQ=255)
aCTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATa < 2:122370/93‑1 (MQ=255)
aCTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATa < 1:985734/93‑1 (MQ=255)
cTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATAc > 2:3498200/1‑93 (MQ=255)
ttAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACt > 1:4174967/1‑93 (MQ=255)
ttAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACt > 2:1374686/1‑93 (MQ=255)
ttAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACt > 2:2813220/1‑93 (MQ=255)
ttAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACt < 2:428942/93‑1 (MQ=255)
aataaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACttt < 2:3392040/93‑1 (MQ=255)
aataaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACttt < 1:2083136/93‑1 (MQ=255)
taaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGc < 2:723746/93‑1 (MQ=255)
taaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGc > 1:3717269/1‑93 (MQ=255)
aaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGcc < 1:1784582/93‑1 (MQ=255)
aaCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGCAACTGGCGGCAATACTTTGcc < 1:4469973/93‑1 (MQ=255)
aaCAGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGcc < 1:6220975/93‑1 (MQ=255)
aCTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCg > 1:2452830/1‑93 (MQ=255)
cTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCgg > 2:660174/1‑93 (MQ=255)
cTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCgg < 1:3363237/93‑1 (MQ=255)
tGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGt > 2:4351307/1‑93 (MQ=255)
tGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGt < 2:5171322/93‑1 (MQ=255)
ttGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTtat > 1:6256297/1‑93 (MQ=255)
ttGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTtat < 2:5485271/93‑1 (MQ=255)
aGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATAcc < 2:5741081/93‑1 (MQ=255)
aGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATAcc < 2:1783439/93‑1 (MQ=255)
gCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCt > 2:2464455/1‑93 (MQ=255)
cGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCtt > 1:2906339/1‑93 (MQ=255)
gaagaagaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCttt < 2:6017812/93‑1 (MQ=255)
gaagaagaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCttt < 2:3059187/93‑1 (MQ=255)
aagaagaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTg > 1:5053549/1‑93 (MQ=255)
agaagaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTgg > 1:1564628/1‑93 (MQ=255)
gaagaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGt < 2:4459654/93‑1 (MQ=255)
gaaAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCgg > 2:2234743/1‑93 (MQ=255)
aaaGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGc > 1:5707176/1‑93 (MQ=255)
aaGCCTATGGATCCAGTCGCGCATTCATCTACGGGTTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTCTTCCTTTGGTCGGCa < 2:5381745/93‑1 (MQ=255)
|
GAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCA > NC_000913/676264‑676442
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATAT > NC_000913/676262‑676446
|
GCGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCT < SRR4302533.6056941/94‑1 (MQ=60)
CGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTA > SRR4302533.2187748/1‑94 (MQ=60)
GAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTAT < SRR4302533.4885819/94‑1 (MQ=60)
GAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTAT < SRR4302533.5960544/94‑1 (MQ=60)
GAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTAT < SRR4302533.5186947/94‑1 (MQ=60)
AGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGAGAAGAAGAAAGCCTATGG < SRR4302533.4955370/94‑1 (MQ=60)
GGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGA > SRR4302533.859220/1‑94 (MQ=60)
GGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATC < SRR4302533.1609198/94‑1 (MQ=60)
GGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATC < SRR4302533.6068219/94‑1 (MQ=60)
CAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCG < SRR4302533.3379226/94‑1 (MQ=60)
GCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGTGAAGAAGAAAGCCTATGGATCCAGTCGCGCA > SRR4302533.3318741/1‑94 (MQ=60)
GCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCA > SRR4302533.4891768/1‑94 (MQ=60)
CCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAT < SRR4302533.3874329/94‑1 (MQ=60)
CCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAT < SRR4302533.3995183/94‑1 (MQ=60)
CCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAT < SRR4302533.5270169/94‑1 (MQ=60)
CCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCAT < SRR4302533.1150961/94‑1 (MQ=60)
CTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATT > SRR4302533.67977/1‑94 (MQ=60)
TGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTC > SRR4302533.195471/1‑94 (MQ=60)
GGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCA < SRR4302533.2907754/94‑1 (MQ=60)
ATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCT < SRR4302533.692156/94‑1 (MQ=60)
TTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTA < SRR4302533.1234929/94‑1 (MQ=60)
TATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTAC < SRR4302533.1038485/94‑1 (MQ=60)
ATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACG > SRR4302533.5504524/1‑94 (MQ=60)
GTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGG > SRR4302533.4920469/1‑94 (MQ=60)
CCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCT > SRR4302533.4555978/1‑94 (MQ=60)
CGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTC > SRR4302533.4101856/1‑94 (MQ=60)
GGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCT < SRR4302533.5170600/94‑1 (MQ=60)
GATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTA > SRR4302533.6034403/1‑94 (MQ=60)
GTGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAC < SRR4302533.1158421/94‑1 (MQ=60)
ATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAC < SRR4302533.4330740/94‑1 (MQ=60)
ATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTAC < SRR4302533.358357/94‑1 (MQ=60)
TGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACG < SRR4302533.937882/94‑1 (MQ=60)
TGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACG < SRR4302533.1933827/94‑1 (MQ=60)
TGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACG < SRR4302533.522368/94‑1 (MQ=60)
GGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGT > SRR4302533.4719410/1‑94 (MQ=60)
GTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTA < SRR4302533.5770398/94‑1 (MQ=60)
TTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTAT < SRR4302533.5116302/94‑1 (MQ=60)
TTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTA < SRR4302533.5259650/94‑1 (MQ=60)
TTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGAATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTA < SRR4302533.761197/94‑1 (MQ=60)
TTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTAT < SRR4302533.118684/94‑1 (MQ=60)
TAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAG < SRR4302533.551505/94‑1 (MQ=60)
TAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAG > SRR4302533.580603/1‑94 (MQ=60)
GCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAA < SRR4302533.3630167/94‑1 (MQ=60)
CCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAAC > SRR4302533.1232070/1‑94 (MQ=60)
CGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACT < SRR4302533.1730203/94‑1 (MQ=60)
CGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACT < SRR4302533.5051088/94‑1 (MQ=60)
CGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACT < SRR4302533.4722739/94‑1 (MQ=60)
GAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTG < SRR4302533.5131152/94‑1 (MQ=60)
GAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTG < SRR4302533.3729940/94‑1 (MQ=60)
AATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGG < SRR4302533.3812664/94‑1 (MQ=60)
ATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGC > SRR4302533.2711058/1‑94 (MQ=60)
TGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCG > SRR4302533.3025569/1‑94 (MQ=60)
GGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGC < SRR4302533.2256670/94‑1 (MQ=60)
CGTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAA > SRR4302533.2340070/1‑94 (MQ=60)
GTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAAT < SRR4302533.303224/94‑1 (MQ=60)
GTACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAAT > SRR4302533.215482/1‑94 (MQ=60)
TACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATA < SRR4302533.3595143/94‑1 (MQ=60)
TACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATA < SRR4302533.6333626/94‑1 (MQ=60)
ACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATAC < SRR4302533.991504/94‑1 (MQ=60)
ACTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATAC > SRR4302533.3556793/1‑94 (MQ=60)
CTTAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACT > SRR4302533.4200264/1‑94 (MQ=60)
TAATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTT < SRR4302533.5513580/94‑1 (MQ=60)
AATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTG < SRR4302533.2095961/94‑1 (MQ=60)
AATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTG < SRR4302533.2461416/94‑1 (MQ=60)
ATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGC < SRR4302533.1803598/94‑1 (MQ=60)
ATAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGC > SRR4302533.3740087/1‑94 (MQ=60)
TAACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCC < SRR4302533.5672519/94‑1 (MQ=60)
AANTNNNTNAGCGAAGAAGAANNNCTATGGNTCCAGTCGNGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCG < SRR4302533.1427377/94‑1 (MQ=60)
AACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCG < SRR4302533.1795433/94‑1 (MQ=60)
AACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCG > SRR4302533.2467967/1‑94 (MQ=60)
AACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGCAACTGGCGGCAATACTTTGCCG < SRR4302533.4497007/94‑1 (MQ=60)
AACAGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCG < SRR4302533.6258266/94‑1 (MQ=60)
ACTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACTGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGG > SRR4302533.2475634/1‑94 (MQ=60)
CTGGTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGT < SRR4302533.3384018/94‑1 (MQ=60)
GTTGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTAT > SRR4302533.6293710/1‑94 (MQ=60)
TGAGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATAC > SRR4302533.3828070/1‑94 (MQ=60)
AGCGAAGAAGAAATCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCT < SRR4302533.6258440/94‑1 (MQ=60)
AGCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCT < SRR4302533.3756176/94‑1 (MQ=60)
GCGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTT > SRR4302533.2924182/1‑94 (MQ=60)
CGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTT > SRR4302533.5188210/1‑94 (MQ=60)
CGAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTT < SRR4302533.1795253/94‑1 (MQ=60)
GAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTG > SRR4302533.2101188/1‑94 (MQ=60)
GAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTG < SRR4302533.3957916/94‑1 (MQ=60)
GAAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTG > SRR4302533.5084101/1‑94 (MQ=60)
AAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGG > SRR4302533.1574045/1‑94 (MQ=60)
AAGAAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGG < SRR4302533.797740/94‑1 (MQ=60)
AAGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCG > SRR4302533.2178992/1‑94 (MQ=60)
AGAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGG > SRR4302533.3208455/1‑94 (MQ=60)
GAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGC > SRR4302533.5741649/1‑94 (MQ=60)
GAAAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGC > SRR4302533.5398299/1‑94 (MQ=60)
AAGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAA > SRR4302533.2916611/1‑94 (MQ=60)
AGCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAAT > SRR4302533.1020511/1‑94 (MQ=60)
GCCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATA > SRR4302533.2854466/1‑94 (MQ=60)
CCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATAT < SRR4302533.1537309/94‑1 (MQ=60)
CCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATAC < SRR4302533.1867683/94‑1 (MQ=60)
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GCGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATAT > NC_000913/676262‑676446
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
