Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
800,018 |
A→G |
T13A (ACC→GCC) |
ybhH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 800,018 | 0 | A | G | 100.0%
| 709.1
/ NA
| 221 | T13A (ACC→GCC) | ybhH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/101); total (120/101) |
Only 100 of 224 total aligned reads displayed.
CCCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGT > NC_000913/799928‑800107
|
cccTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATAGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGcc > 2:6115542/1‑93 (MQ=255)
ccTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCt < 1:2865948/93‑1 (MQ=255)
cTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTc > 1:4691557/1‑93 (MQ=255)
tAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGa < 2:2704389/93‑1 (MQ=255)
tAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGa > 1:5977509/1‑93 (MQ=255)
aaTGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAg > 2:2438015/1‑93 (MQ=255)
aaTGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAg < 1:430976/93‑1 (MQ=255)
aaTGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAg > 1:3315858/1‑93 (MQ=255)
aTGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgg < 2:1406838/93‑1 (MQ=255)
tGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAggg < 2:3378646/93‑1 (MQ=255)
gTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgggg > 1:1386202/1‑93 (MQ=255)
gTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgggg < 2:480040/93‑1 (MQ=255)
gTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgggg > 1:2266625/1‑93 (MQ=255)
gTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgggg < 2:4849432/93‑1 (MQ=255)
gTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAgggg > 1:3878508/1‑93 (MQ=255)
tAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATCCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgc < 1:1017484/93‑1 (MQ=255)
tAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgc < 1:3021037/93‑1 (MQ=255)
tAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgc > 2:4955687/1‑93 (MQ=255)
aCCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgcgc > 2:4651881/1‑93 (MQ=255)
aCCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgcgc > 1:4764413/1‑93 (MQ=255)
aCCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGgcgc > 1:2378208/1‑93 (MQ=255)
ccATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGcgcg > 2:3490256/1‑93 (MQ=255)
cATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGt > 1:193636/1‑93 (MQ=255)
cATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGt > 2:4697909/1‑93 (MQ=255)
atatCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGtt > 1:4382430/1‑93 (MQ=255)
atCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTcc > 2:3613512/1‑93 (MQ=255)
tCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCt > 1:3228540/1‑93 (MQ=255)
tCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCt < 1:1874874/93‑1 (MQ=255)
cGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTg > 1:5779557/1‑93 (MQ=255)
gCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGt > 1:2468376/1‑93 (MQ=255)
gCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGt < 2:1092403/93‑1 (MQ=255)
gCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGt > 1:6192859/1‑93 (MQ=255)
cAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGtt < 1:484136/93‑1 (MQ=255)
aaTAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTa < 2:4426527/93‑1 (MQ=255)
aTAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAg > 2:725196/1‑93 (MQ=255)
tAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGc > 2:6196982/1‑93 (MQ=255)
aaGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCg < 1:2108044/93‑1 (MQ=255)
aGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAgggg > 2:4480880/1‑93 (MQ=255)
gTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGa > 1:3738074/1‑93 (MQ=255)
ttATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCggga > 2:3263305/1‑91 (MQ=255)
tATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAAc > 2:3853117/1‑93 (MQ=255)
tATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAAc > 2:2551639/1‑93 (MQ=255)
gTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGGACAtt > 2:2255070/1‑93 (MQ=255)
gTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAtt < 1:879166/93‑1 (MQ=255)
gTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAtt < 2:1245954/93‑1 (MQ=255)
gTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAtt > 2:1955413/1‑93 (MQ=255)
gTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAtt < 2:5203326/93‑1 (MQ=255)
gTTTGTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAtt < 1:2721873/93‑1 (MQ=255)
ttttAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTa < 1:6257838/93‑1 (MQ=255)
ttttAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTa < 2:1517491/93‑1 (MQ=255)
tttAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTAc < 1:5175952/93‑1 (MQ=255)
ttAAATTGAGGGCATTATTATGAAAAAAATGCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTAcc < 1:3956071/93‑1 (MQ=255)
tAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTAccc < 1:5595900/93‑1 (MQ=255)
tAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTAccc > 1:2017525/1‑93 (MQ=255)
aaaTTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCg < 2:5531307/93‑1 (MQ=255)
aaTTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGa > 1:4421790/1‑93 (MQ=255)
tGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGa > 1:5051214/1‑93 (MQ=255)
gAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGAt < 1:3597777/93‑1 (MQ=255)
gAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGAt > 2:1800749/1‑93 (MQ=255)
ggCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCaa > 2:3753475/1‑93 (MQ=255)
cATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAAc < 1:5832354/93‑1 (MQ=255)
attattATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTATCGGAAAATTTCCCCGAAGGTCAAAcc > 1:4568091/1‑92 (MQ=255)
ttattaTGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGc > 2:1591510/1‑93 (MQ=255)
ttattaTGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGc < 2:6014908/93‑1 (MQ=255)
tattatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCa < 1:1145778/93‑1 (MQ=255)
attatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAg < 1:2655801/93‑1 (MQ=255)
attatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAg > 2:6287643/1‑93 (MQ=255)
tatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAgcg > 2:4082755/1‑93 (MQ=255)
tatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAgcg > 2:132713/1‑93 (MQ=255)
tatGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAgcg > 2:1354811/1‑93 (MQ=255)
tGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGcgcg > 1:3998098/1‑93 (MQ=255)
gAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGa > 2:5766131/1‑93 (MQ=255)
aaaaaaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGAt > 1:3440929/1‑93 (MQ=255)
aaaaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATaa > 2:219537/1‑93 (MQ=255)
aaaaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATaa < 2:5265752/93‑1 (MQ=255)
aaaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATaaa < 1:1274017/93‑1 (MQ=255)
aaaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATaaa < 2:1632268/93‑1 (MQ=255)
aaaTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATaaaa < 2:3043647/93‑1 (MQ=255)
acaCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAata < 2:1012170/91‑1 (MQ=255)
aTACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAata < 2:3988574/93‑1 (MQ=255)
cccTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTg < 2:5164645/93‑1 (MQ=255)
cTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGAt < 1:5245741/93‑1 (MQ=255)
tGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATg > 2:1275690/1‑93 (MQ=255)
cGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGc < 1:1253441/93‑1 (MQ=255)
tgatgaTGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCaa > 1:580473/1‑93 (MQ=255)
gatgatGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAAt > 1:4101795/1‑93 (MQ=255)
gatgatGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAAt > 2:3434656/1‑93 (MQ=255)
atgatgCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAAtt < 1:6019106/93‑1 (MQ=255)
tgatgCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTa < 2:4632982/93‑1 (MQ=255)
tgatgCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTa < 2:2814968/93‑1 (MQ=255)
tgatgCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTa < 2:2330720/93‑1 (MQ=255)
tgCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATgg < 2:5708858/93‑1 (MQ=255)
ctcGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAatat < 1:1629129/76‑1 (MQ=255)
cGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGt < 1:5461130/93‑1 (MQ=255)
gAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGtt < 1:5089458/93‑1 (MQ=255)
gAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGtt < 1:5962733/93‑1 (MQ=255)
gAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGCCAATTATGGGtt > 1:801114/1‑93 (MQ=255)
ggTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTcc > 1:4268497/1‑93 (MQ=255)
ggTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTcc < 2:3101770/93‑1 (MQ=255)
ggAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGt < 2:579146/93‑1 (MQ=255)
|
CCCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGT > NC_000913/799928‑800107
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGCCCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAAC > NC_000913/799925‑800110
|
TTGCCCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAG < SRR4302533.905487/94‑1 (MQ=60)
CCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTC < SRR4302533.2883581/94‑1 (MQ=60)
CCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTC > SRR4302533.4719994/1‑94 (MQ=60)
CCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTC > SRR4302533.1400225/1‑94 (MQ=60)
CTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCG > SRR4302533.1973761/1‑94 (MQ=60)
CTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCG > SRR4302533.556683/1‑94 (MQ=60)
TTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGA > SRR4302533.6013714/1‑94 (MQ=60)
TAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAG > SRR4302533.3336332/1‑94 (MQ=60)
AATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGG > SRR4302533.1213946/1‑94 (MQ=60)
AATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGG < SRR4302533.433545/94‑1 (MQ=60)
TGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGG > SRR4302533.2280646/1‑94 (MQ=60)
TGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGG > SRR4302533.1394543/1‑94 (MQ=60)
TGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGG > SRR4302533.3902178/1‑94 (MQ=60)
GTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGC < SRR4302533.475132/94‑1 (MQ=60)
GTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGC < SRR4302533.939464/94‑1 (MQ=60)
GTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGAGAGGTGGAGCCTCGAGGGGC < SRR4302533.4300710/94‑1 (MQ=60)
TAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATCCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCG < SRR4302533.1023465/94‑1 (MQ=60)
TAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCG < SRR4302533.3039525/94‑1 (MQ=60)
AACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGC > SRR4302533.4793306/1‑94 (MQ=60)
AACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGC > SRR4302533.2392923/1‑94 (MQ=60)
AACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGC > SRR4302533.2734452/1‑94 (MQ=60)
CCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGT > SRR4302533.194858/1‑94 (MQ=60)
CATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTT > SRR4302533.4408889/1‑94 (MQ=60)
ATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTC > SRR4302533.4480649/1‑94 (MQ=60)
ATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCT > SRR4302533.2040889/1‑94 (MQ=60)
ATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCT > SRR4302533.3248442/1‑94 (MQ=60)
ATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCT > SRR4302533.2618526/1‑94 (MQ=60)
TCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTG > SRR4302533.5814462/1‑94 (MQ=60)
TCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTG < SRR4302533.1886297/94‑1 (MQ=60)
CGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGT > SRR4302533.2483601/1‑94 (MQ=60)
CGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGT > SRR4302533.6230020/1‑94 (MQ=60)
CAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTA > SRR4302533.5842583/1‑94 (MQ=60)
CAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTA < SRR4302533.487030/94‑1 (MQ=60)
TAAGTTATGTTTTTAAATTGAGGTCATTATTATGAAAAAAATGCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCG < SRR4302533.5223795/94‑1 (MQ=60)
TAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGatccctctagcg > SRR4302533.5395945/1‑82 (MQ=60)
AAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGG > SRR4302533.313378/1‑94 (MQ=60)
AAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGG < SRR4302533.2121047/94‑1 (MQ=60)
AGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGA < SRR4302533.3286143/94‑1 (MQ=60)
AGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGA > SRR4302533.3761001/1‑94 (MQ=60)
AGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGA < SRR4302533.4591574/94‑1 (MQ=60)
GTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAA > SRR4302533.1274941/1‑94 (MQ=60)
GTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAA > SRR4302533.410528/1‑94 (MQ=60)
GTTATGTTTTTAAACTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGTGCGTTCCTGTTAGCGGAA > SRR4302533.6033582/1‑94 (MQ=60)
TTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAAC > SRR4302533.5112906/1‑94 (MQ=60)
GTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAAC < SRR4302533.1740287/94‑1 (MQ=60)
TATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACA > SRR4302533.5307606/1‑94 (MQ=60)
TATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACA > SRR4302533.832673/1‑94 (MQ=60)
TATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACA < SRR4302533.3746860/94‑1 (MQ=60)
ATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACAT > SRR4302533.5960063/1‑94 (MQ=60)
ATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGCTCCTGTTAGCGGAACAT > SRR4302533.2377654/1‑94 (MQ=60)
GTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTT < SRR4302533.884325/94‑1 (MQ=60)
GTTTGTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTT < SRR4302533.2738577/94‑1 (MQ=60)
TTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTA < SRR4302533.2576908/94‑1 (MQ=60)
TTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTAC < SRR4302533.6295260/94‑1 (MQ=60)
TTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACC < SRR4302533.5207215/94‑1 (MQ=60)
TTAAATTGAGGGCATTATTATGAAAAAAATGCCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCC < SRR4302533.3980187/94‑1 (MQ=60)
TTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTTCCC > SRR4302533.5345256/1‑94 (MQ=60)
TTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCC > SRR4302533.2029958/1‑94 (MQ=60)
TAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCG < SRR4302533.2986425/94‑1 (MQ=60)
TAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCG < SRR4302533.5629712/94‑1 (MQ=60)
TAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCG < SRR4302533.89719/94‑1 (MQ=60)
AAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGA < SRR4302533.1382300/94‑1 (MQ=60)
AAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGA > SRR4302533.4448525/1‑94 (MQ=60)
AATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACCTTTACCCGAA > SRR4302533.4664130/1‑94 (MQ=60)
ATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAG > SRR4302533.4837986/1‑94 (MQ=60)
ATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAG < SRR4302533.1893297/94‑1 (MQ=60)
ATTGAGCGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAG < SRR4302533.3948328/94‑1 (MQ=60)
TTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGA > SRR4302533.5081760/1‑94 (MQ=60)
TGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGAT > SRR4302533.2079845/1‑94 (MQ=60)
GAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATC < SRR4302533.3619914/94‑1 (MQ=60)
AGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCA > SRR4302533.5014436/1‑94 (MQ=60)
GGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAA < SRR4302533.6286272/94‑1 (MQ=60)
GCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAAC > SRR4302533.3357177/1‑94 (MQ=60)
GCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAAC < SRR4302533.5851434/94‑1 (MQ=60)
GCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAAC < SRR4302533.5661003/94‑1 (MQ=60)
CATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTATCGGAAAATTTCCCCGAAGGTCAAACC > SRR4302533.4595781/1‑94 (MQ=60)
CATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACG > SRR4302533.3745995/1‑94 (MQ=60)
CATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACG < SRR4302533.5867602/94‑1 (MQ=60)
CATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACG < SRR4302533.4401371/94‑1 (MQ=60)
ATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGC > SRR4302533.3183557/1‑94 (MQ=60)
TATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAG < SRR4302533.1152617/94‑1 (MQ=60)
TATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAG < SRR4302533.4418079/94‑1 (MQ=60)
ATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGC < SRR4302533.2672113/94‑1 (MQ=60)
ATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGC > SRR4302533.4174729/1‑94 (MQ=60)
TTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCG > SRR4302533.606108/1‑94 (MQ=60)
ATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCG > SRR4302533.4022440/1‑94 (MQ=60)
GAAAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGAT > SRR4302533.3462176/1‑94 (MQ=60)
AAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAA < SRR4302533.4895547/94‑1 (MQ=60)
AAAAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAA > SRR4302533.2842119/1‑94 (MQ=60)
AAAATACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAA < SRR4302533.1281676/94‑1 (MQ=60)
ccgatctgctgtatcctCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATT < SRR4302533.1638995/77‑1 (MQ=60)
TACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATT > SRR4302533.630642/1‑94 (MQ=60)
ACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTG > SRR4302533.6223971/1‑94 (MQ=60)
ACCCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTG > SRR4302533.2420927/1‑94 (MQ=60)
CCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGAT < SRR4302533.4092713/94‑1 (MQ=60)
CCTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGAT > SRR4302533.6002534/1‑94 (MQ=60)
CTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATG > SRR4302533.5833434/1‑94 (MQ=60)
CTGCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATG < SRR4302533.5277287/94‑1 (MQ=60)
GCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGC < SRR4302533.1130736/94‑1 (MQ=60)
GCGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGC < SRR4302533.3829907/94‑1 (MQ=60)
CGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCA > SRR4302533.518421/1‑94 (MQ=60)
CGTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCA < SRR4302533.1260935/94‑1 (MQ=60)
GTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAA > SRR4302533.583889/1‑94 (MQ=60)
GTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAA > SRR4302533.3613605/1‑94 (MQ=60)
GTGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAA > SRR4302533.1599612/1‑94 (MQ=60)
TGATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAAT > SRR4302533.4126755/1‑94 (MQ=60)
ATGATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTA < SRR4302533.6055580/94‑1 (MQ=60)
ATGCGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGG > SRR4302533.4020862/1‑94 (MQ=60)
CGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTT < SRR4302533.5494031/94‑1 (MQ=60)
CGAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGCCAATTATGGGTT > SRR4302533.805825/1‑94 (MQ=60)
GAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTC < SRR4302533.5998805/94‑1 (MQ=60)
GAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTC < SRR4302533.5120208/94‑1 (MQ=60)
GAGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGGTC > SRR4302533.2249068/1‑94 (MQ=60)
AGGTGGAGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCC > SRR4302533.4294195/1‑94 (MQ=60)
AGCCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAAC < SRR4302533.2889153/94‑1 (MQ=60)
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TTGCCCTTAATGTAACCATATCGCAATAAGTTATGTTTTTAAATTGAGGGCATTATTATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAAC > NC_000913/799925‑800110
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
