Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	800,958	A→G	Q326R (CAG→CGG)	ybhH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	800,958	0	A	G	100.0%	1077.3 / NA	330	Q326R (CAG→CGG)	ybhH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (171/159); total (171/159)

Only 100 of 346 total aligned reads displayed.

CCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT  >  NC_000913/800868‑801047

cccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCggg                                                                                         >  1:5687496/1‑93 (MQ=255)

cccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCggg                                                                                         >  1:333833/1‑93 (MQ=255)

 ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa                                                                                        >  2:9078868/1‑93 (MQ=255)

 ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa                                                                                        <  1:1566062/93‑1 (MQ=255)

 ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa                                                                                        <  1:3816321/93‑1 (MQ=255)

  cGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTTAACACCCCAGTGGTGCGCTCGACGCTCATTTAAGTAATGAAGGTCGGGAt                                                                                       >  2:8236751/1‑93 (MQ=255)

  cGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAt                                                                                       <  1:112428/93‑1 (MQ=255)

   gACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGGCGGGATg                                                                                      >  2:2467846/1‑93 (MQ=255)

    aCAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGc                                                                                     >  2:4250494/1‑93 (MQ=255)

     cAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGcc                                                                                    <  2:9769077/93‑1 (MQ=255)

      aaaTCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACAACCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCa                                                                                   >  2:1365808/1‑93 (MQ=255)

       aaTCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCac                                                                                  >  1:3301667/1‑93 (MQ=255)

        aTCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacg                                                                                 >  2:6248847/1‑93 (MQ=255)

        aTCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacg                                                                                 <  1:5750807/93‑1 (MQ=255)

         tCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacga                                                                                <  2:5355261/93‑1 (MQ=255)

           gTCCCTTCTGTAGGCTACGGCAATATCAATATTGAAAACCCCCGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCaagacg                                                                              >  2:1008046/1‑93 (MQ=255)

            tCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGt                                                                             <  2:1477450/93‑1 (MQ=255)

              ccTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTa                                                                           <  1:2810770/93‑1 (MQ=255)

              ccTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTa                                                                           >  2:1068646/1‑93 (MQ=255)

               cTTCTGGAGAATACGGCAATATCAATATTGAACACTCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAc                                                                          <  2:2896358/93‑1 (MQ=255)

                ttCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcg                                                                         <  2:9617902/93‑1 (MQ=255)

                 tCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcgc                                                                        <  1:8569956/93‑1 (MQ=255)

                   tGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACgcgc                                                                      >  1:752186/1‑93 (MQ=255)

                    gTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCa                                                                     <  1:2718778/93‑1 (MQ=255)

                    gTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCa                                                                     >  1:590866/1‑93 (MQ=255)

                    gTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCa                                                                     >  1:6546586/1‑93 (MQ=255)

                     tAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCAt                                                                    >  2:3639072/1‑93 (MQ=255)

                      aGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATc                                                                   <  2:4585407/93‑1 (MQ=255)

                      aGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATc                                                                   <  1:1360290/93‑1 (MQ=255)

                      aGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATc                                                                   >  1:2331196/1‑93 (MQ=255)

                       ggATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCt                                                                  <  1:9464530/93‑1 (MQ=255)

                        gATACGGCAATATCAATATTGAACCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTg                                                                 <  1:5317252/93‑1 (MQ=255)

                        gATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGTAGGTCGGGATGCCAGGACGTTACGCGCAtatt                                                                 >  2:5048660/1‑90 (MQ=255)

                        gATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTg                                                                 >  1:351246/1‑93 (MQ=255)

                         aTACGGCAATATCAACATTGAATCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGt                                                                <  1:6857603/93‑1 (MQ=255)

                          tACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTCCGCGCATCTGtt                                                               >  2:8059254/1‑93 (MQ=255)

                           aCGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTa                                                              <  1:7334347/93‑1 (MQ=255)

                              gCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTc                                                           <  1:9852165/93‑1 (MQ=255)

                              gCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTc                                                           >  1:4515454/1‑93 (MQ=255)

                               caatatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCg                                                          >  1:427979/1‑93 (MQ=255)

                                aatatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCgg                                                         >  2:3832922/1‑93 (MQ=255)

                                aatatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCgg                                                         >  1:10045128/1‑93 (MQ=255)

                                   atcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgacg                                                      <  2:9480286/93‑1 (MQ=255)

                                     caatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgacgac                                                    >  2:2148864/1‑93 (MQ=255)

                                       atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa                                                  <  2:7716754/93‑1 (MQ=255)

                                       atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa                                                  <  1:4011376/93‑1 (MQ=255)

                                       atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa                                                  <  1:6655835/93‑1 (MQ=255)

                                        tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg                                                 >  1:93217/1‑93 (MQ=255)

                                        tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg                                                 >  1:1148766/1‑93 (MQ=255)

                                         atTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGa                                                <  2:2077578/93‑1 (MQ=255)

                                          ttGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaa                                               >  1:1685467/1‑93 (MQ=255)

                                            gAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaaca                                             >  1:2183935/1‑91 (MQ=255)

                                            gAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaaaa                                             <  1:8014532/93‑1 (MQ=255)

                                            gAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaaaa                                             >  2:3079602/1‑93 (MQ=255)

                                             aaCACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaaaaa                                            >  2:4379270/1‑93 (MQ=255)

                                              acacCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAat                                           <  2:3298513/93‑1 (MQ=255)

                                               ccccccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAata                                          <  2:7272689/91‑1 (MQ=255)

                                                acCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAatat                                         <  2:6983270/93‑1 (MQ=255)

                                                 ccccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAtt                                        <  1:1886177/93‑1 (MQ=255)

                                                  cccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAttt                                       <  1:2682958/93‑1 (MQ=255)

                                                   ccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAtttt                                      >  1:709802/1‑93 (MQ=255)

                                                   ccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAtttt                                      >  1:23767/1‑93 (MQ=255)

                                                   ccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAtttt                                      <  2:558031/93‑1 (MQ=255)

                                                    cAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTc                                     <  2:7865963/93‑1 (MQ=255)

                                                    cAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTAGGACGACCAGAAAAATATTTTc                                     >  2:8364476/1‑93 (MQ=255)

                                                     aGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTcc                                    <  2:2572617/93‑1 (MQ=255)

                                                      gtggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAACTATTTTCCg                                   >  1:8141121/1‑93 (MQ=255)

                                                      gtggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCg                                   >  1:7665729/1‑93 (MQ=255)

                                                      gtggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCg                                   >  2:9545032/1‑93 (MQ=255)

                                                       tggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCgg                                  >  1:6318074/1‑93 (MQ=255)

                                                        ggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGt                                 <  2:9330524/93‑1 (MQ=255)

                                                          tgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGa                               <  1:4618892/93‑1 (MQ=255)

                                                            cgcTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAg                             <  2:3949470/93‑1 (MQ=255)

                                                               tCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGttt                          <  1:4890351/93‑1 (MQ=255)

                                                                 gACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAt                        >  1:2490425/1‑93 (MQ=255)

                                                                  aCGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATc                       <  1:73107/93‑1 (MQ=255)

                                                                  aCGTTCATTTAAGTAATGAAGGCCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGCCCAGAAAAATATTTTCCGGTGAAGTTTATc                       >  2:9439756/1‑93 (MQ=255)

                                                                   cGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCt                      >  1:8683566/1‑93 (MQ=255)

                                                                   cGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCt                      >  2:8774560/1‑93 (MQ=255)

                                                                    gTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCtt                     >  1:3002795/1‑93 (MQ=255)

                                                                    gTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCtt                     >  1:6946886/1‑93 (MQ=255)

                                                                     ttCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTc                    >  1:7467689/1‑93 (MQ=255)

                                                                     ttCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTc                    >  2:5814581/1‑93 (MQ=255)

                                                                     ttCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTc                    <  2:8440059/93‑1 (MQ=255)

                                                                       cATTTAAGTACTGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCtttcg                  >  2:7549041/1‑90 (MQ=255)

                                                                       cATTTAAGTAATGAAGGACAGGCTGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTcca                  <  1:8958250/93‑2 (MQ=255)

                                                                         tttAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTg                >  2:1835561/1‑93 (MQ=255)

                                                                           tAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGaa              >  2:2416660/1‑93 (MQ=255)

                                                                           tAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGaa              <  2:9135364/93‑1 (MQ=255)

                                                                             aGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGaaaa            >  2:4753194/1‑93 (MQ=255)

                                                                             aGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGaaaa            <  1:4164538/93‑1 (MQ=255)

                                                                              gTAATGAAGGTCGGGATGCCACGACGTTACGCGGATCTGTGGTTCGGACGACCAGAAAAGTATTTTCCGGTGAAGTTTATCTTTCCGGaaaaa           >  1:6088281/1‑93 (MQ=255)

                                                                              atAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGaaaaa           <  2:7925735/92‑1 (MQ=255)

                                                                                aaTGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAAt         <  1:6186412/93‑1 (MQ=255)

                                                                                    aaGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGt     <  1:504786/93‑1 (MQ=255)

                                                                                    aaGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAGCTTCCCTGAAAAAATTCGt     >  1:9781366/1‑93 (MQ=255)

                                                                                     aGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGtt    <  2:6563188/93‑1 (MQ=255)

                                                                                      ggTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTg   >  2:1535939/1‑93 (MQ=255)

                                                                                      ggTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTg   <  1:7796849/93‑1 (MQ=255)

                                                                                       gTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGGTTATCTTCCCTGAAAAAATTCGTTGt  >  2:8947052/1‑93 (MQ=255)

CCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT  >  NC_000913/800868‑801047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  >  NC_000913/800866‑801051

CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTTGACGTTCATTTAAGTGATGAAGGTCGG                                                                                              >  SRR4302540.345112/1‑94 (MQ=60)

CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGG                                                                                              <  SRR4302540.6200772/94‑1 (MQ=60)

CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGG                                                                                              <  SRR4302540.5099033/94‑1 (MQ=60)

 ACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGG                                                                                             >  SRR4302540.337190/1‑94 (MQ=60)

 ACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGG                                                                                             >  SRR4302540.5750104/1‑94 (MQ=60)

  CCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGA                                                                                            >  SRR4302540.2578700/1‑94 (MQ=60)

   CCGACAAATCTTCCCTTCTGTAGGATACGGCAATATCAATATTGAACGCCCCAGTGGTGCGCTCGACTTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.3352325/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.3508712/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.4585933/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.5927917/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.3857873/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.1583245/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.3352324/94‑1 (MQ=60)

   CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT                                                                                           <  SRR4302540.8408753/94‑1 (MQ=60)

    CGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATG                                                                                          <  SRR4302540.113628/94‑1 (MQ=60)

     GACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGC                                                                                         <  SRR4302540.4310850/94‑1 (MQ=60)

     GACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGC                                                                                         >  SRR4302540.4847088/1‑94 (MQ=60)

       CAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCA                                                                                       >  SRR4302540.1596125/1‑94 (MQ=60)

        AAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCAC                                                                                      >  SRR4302540.3337809/1‑94 (MQ=60)

         AATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACG                                                                                     >  SRR4302540.2730454/1‑94 (MQ=60)

          ATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGA                                                                                    <  SRR4302540.5814278/94‑1 (MQ=60)

             GTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGT                                                                                 >  SRR4302540.6943844/1‑94 (MQ=60)

             GTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGT                                                                                 >  SRR4302540.3107681/1‑94 (MQ=60)

             GTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGT                                                                                 >  SRR4302540.7648895/1‑94 (MQ=60)

             GTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGT                                                                                 >  SRR4302540.7648894/1‑94 (MQ=60)

              TCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTT                                                                                <  SRR4302540.5110781/94‑1 (MQ=60)

              TCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTT                                                                                >  SRR4302540.4372301/1‑94 (MQ=60)

               CCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTA                                                                               >  SRR4302540.78746/1‑94 (MQ=60)

               CCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTA                                                                               >  SRR4302540.3988137/1‑94 (MQ=60)

                CCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAC                                                                              <  SRR4302540.2841126/94‑1 (MQ=60)

                CCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCAACGACGTTAC                                                                              >  SRR4302540.7714378/1‑94 (MQ=60)

                   TCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCG                                                                           <  SRR4302540.8061133/94‑1 (MQ=60)

                   TCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCG                                                                           <  SRR4302540.8669507/94‑1 (MQ=60)

                    CTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGC                                                                          >  SRR4302540.760198/1‑94 (MQ=60)

                    CTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGC                                                                          <  SRR4302540.9558160/94‑1 (MQ=60)

                     TGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCA                                                                         >  SRR4302540.597233/1‑94 (MQ=60)

                     TGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCA                                                                         >  SRR4302540.6619214/1‑94 (MQ=60)

                      GTAGGATACGGCAATATCAATATTGAACCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCAT                                                                        <  SRR4302540.9506774/94‑1 (MQ=60)

                      GTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCAT                                                                        >  SRR4302540.6279936/1‑94 (MQ=60)

                      GTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCAT                                                                        <  SRR4302540.2748089/94‑1 (MQ=60)

                       TAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATC                                                                       >  SRR4302540.2356312/1‑94 (MQ=60)

                        AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT                                                                      <  SRR4302540.1208952/94‑1 (MQ=60)

                        AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT                                                                      <  SRR4302540.1166965/94‑1 (MQ=60)

                        AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT                                                                      <  SRR4302540.1374643/94‑1 (MQ=60)

                        AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT                                                                      <  SRR4302540.7364100/94‑1 (MQ=60)

                        AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT                                                                      >  SRR4302540.7469954/1‑94 (MQ=60)

                         GGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTG                                                                     <  SRR4302540.9576812/94‑1 (MQ=60)

                         GGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTG                                                                     >  SRR4302540.354844/1‑94 (MQ=60)

                          GATACGGCAATATCAATATTGAACCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGT                                                                    <  SRR4302540.5375472/94‑1 (MQ=60)

                          GATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATTAAGGTCGGGATGCCACGACGTTACGCGCATCTGT                                                                    >  SRR4302540.7605756/1‑94 (MQ=60)

                          GATACGGCAATATCAATATTCAACACCCCAGGGGTGCGATCGACGTTCATTTAAGTAATGAAGGACGGGATGCCACGACGTTACGCTCATCTGT                                                                    >  SRR4302540.8919385/1‑94 (MQ=60)

                           ATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTT                                                                   <  SRR4302540.10032788/94‑1 (MQ=60)

                           ATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTT                                                                   <  SRR4302540.6933594/94‑1 (MQ=60)

                           ATACGGCAATATCAACATTGAATCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTT                                                                   <  SRR4302540.6933593/94‑1 (MQ=60)

                            TACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTA                                                                  <  SRR4302540.6186459/94‑1 (MQ=60)

                            TACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTA                                                                  <  SRR4302540.1979899/94‑1 (MQ=60)

                             ACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAT                                                                 <  SRR4302540.7416203/94‑1 (MQ=60)

                             ACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAT                                                                 <  SRR4302540.7416204/94‑1 (MQ=60)

                              CGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATT                                                                >  SRR4302540.6410477/1‑94 (MQ=60)

                               GGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTC                                                               >  SRR4302540.4564373/1‑94 (MQ=60)

                               GGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTC                                                               <  SRR4302540.2417994/94‑1 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTTGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              <  SRR4302540.8779159/94‑1 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              <  SRR4302540.9967314/94‑1 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              >  SRR4302540.9441048/1‑94 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              <  SRR4302540.1638766/94‑1 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              >  SRR4302540.432481/1‑94 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              <  SRR4302540.6639800/94‑1 (MQ=60)

                                GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTAGGGATGCCACGACGTTACGCGCATCTGTTATTCG                                                              <  SRR4302540.3968297/94‑1 (MQ=60)

                                 CAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGG                                                             >  SRR4302540.10161905/1‑94 (MQ=60)

                                  AATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGA                                                            >  SRR4302540.5983296/1‑94 (MQ=60)

                                  AATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGA                                                            >  SRR4302540.7953277/1‑94 (MQ=60)

                                  AATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGA                                                            >  SRR4302540.6439949/1‑94 (MQ=60)

                                   ATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAC                                                           <  SRR4302540.6783118/94‑1 (MQ=60)

                                   ATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAC                                                           <  SRR4302540.9247956/94‑1 (MQ=60)

                                   ATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAC                                                           >  SRR4302540.3760365/1‑94 (MQ=60)

                                   ATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAC                                                           >  SRR4302540.746218/1‑94 (MQ=60)

                                    TATCAATATTGAACACCCCAGTGGTGCGTTGGTCGTTCATTTAGGTAATGAAGGTCGGGATGCCACGCCGTTCCGCGCATCTTTTATTCGGACC                                                          >  SRR4302540.7385049/1‑94 (MQ=60)

                                    TATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACG                                                          <  SRR4302540.10046732/94‑1 (MQ=60)

                                    AATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACG                                                          <  SRR4302540.3370883/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.6729443/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     >  SRR4302540.1149898/1‑94 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.5767352/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     >  SRR4302540.94207/1‑94 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.2365098/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     >  SRR4302540.1160743/1‑94 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.4054583/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     >  SRR4302540.4568522/1‑94 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.2806758/94‑1 (MQ=60)

                                         ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     >  SRR4302540.6424473/1‑94 (MQ=60)

                                         ATATGGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG                                                     <  SRR4302540.5767351/94‑1 (MQ=60)

                                          TATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGA                                                    >  SRR4302540.6193813/1‑94 (MQ=60)

                                           ATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGCCGTTATGCGCATCTGTTATTCGGACGACCAGAA                                                   >  SRR4302540.9945925/1‑94 (MQ=60)

                                           ATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAA                                                   >  SRR4302540.3744720/1‑94 (MQ=60)

                                           ATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAA                                                   >  SRR4302540.1703755/1‑94 (MQ=60)

                                           ATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAA                                                   <  SRR4302540.5569062/94‑1 (MQ=60)

                                             TGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAACA                                                 >  SRR4302540.2207509/1‑94 (MQ=60)

                                             TGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAA                                                 >  SRR4302540.2207510/1‑94 (MQ=60)

                                              GAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAA                                                <  SRR4302540.8107756/94‑1 (MQ=60)

                                               ACCACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCAGACGACCAGAAAAAT                                               <  SRR4302540.4080010/94‑1 (MQ=60)

                                               AAGACCCCAGTGGTGCGCTCGACGTTTATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAAT                                               <  SRR4302540.2483633/94‑1 (MQ=60)

                                                ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA                                              <  SRR4302540.1802036/94‑1 (MQ=60)

                                                ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA                                              >  SRR4302540.7413471/1‑94 (MQ=60)

                                                ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA                                              >  SRR4302540.2950649/1‑94 (MQ=60)

                                                ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA                                              <  SRR4302540.2178346/94‑1 (MQ=60)

                                                 CACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTATGCGCATCTGTTATTCGGACGACCAGAAAAATAT                                             >  SRR4302540.9806919/1‑94 (MQ=60)

                                                 CACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAT                                             >  SRR4302540.2338380/1‑94 (MQ=60)

                                                  ACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATT                                            <  SRR4302540.1082073/94‑1 (MQ=60)

                                                  ACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATT                                            <  SRR4302540.1082074/94‑1 (MQ=60)

                                                   CCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTT                                           <  SRR4302540.5927399/94‑1 (MQ=60)

                                                   CCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTT                                           <  SRR4302540.1906827/94‑1 (MQ=60)

                                                    CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT                                          >  SRR4302540.24029/1‑94 (MQ=60)

                                                    CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT                                          >  SRR4302540.717426/1‑94 (MQ=60)

                                                    CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT                                          <  SRR4302540.2711968/94‑1 (MQ=60)

                                                    CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT                                          <  SRR4302540.9423739/94‑1 (MQ=60)

                                                    CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT                                          >  SRR4302540.24028/1‑94 (MQ=60)

                                                      CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC                                        <  SRR4302540.1494227/94‑1 (MQ=60)

                                                      CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC                                        <  SRR4302540.4947412/94‑1 (MQ=60)

                                                      CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC                                        <  SRR4302540.4335198/94‑1 (MQ=60)

                                                      CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC                                        >  SRR4302540.238673/1‑94 (MQ=60)

                                                      CAGTGGTGCGCTCGACATTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC                                        <  SRR4302540.8025145/94‑1 (MQ=60)

                                                       AGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAACTATTTTCCG                                       >  SRR4302540.8235614/1‑94 (MQ=60)

                                                       AGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCG                                       >  SRR4302540.5621574/1‑94 (MQ=60)

                                                       AGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCG                                       >  SRR4302540.7752091/1‑94 (MQ=60)

                                                        GTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGG                                      >  SRR4302540.6388430/1‑94 (MQ=60)

                                                        GTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGG                                      >  SRR4302540.8219663/1‑94 (MQ=60)

                                                        GTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGG                                      >  SRR4302540.5969351/1‑94 (MQ=60)

                                                         TGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGT                                     >  SRR4302540.1559503/1‑94 (MQ=60)

                                                         TGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGT                                     >  SRR4302540.7283204/1‑94 (MQ=60)

                                                          GGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTG                                    >  SRR4302540.3691968/1‑94 (MQ=60)

                                                           GTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGA                                   <  SRR4302540.8115861/94‑1 (MQ=60)

                                                            TGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAA                                  <  SRR4302540.4668416/94‑1 (MQ=60)

                                                             GCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAT                                 >  SRR4302540.8853917/1‑94 (MQ=60)

                                                             GCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAG                                 <  SRR4302540.4311217/94‑1 (MQ=60)

                                                              CGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTGACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGT                                <  SRR4302540.257516/94‑1 (MQ=60)

                                                               GCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGGGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGGAGTT                               >  SRR4302540.4928225/1‑94 (MQ=60)

                                                               GCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTT                               >  SRR4302540.6801016/1‑94 (MQ=60)

                                                               GCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTT                               >  SRR4302540.4928227/1‑94 (MQ=60)

                                                               GCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTT                               >  SRR4302540.6801015/1‑94 (MQ=60)

                                                                CTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTT                              >  SRR4302540.2728572/1‑94 (MQ=60)

                                                                CTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTT                              <  SRR4302540.3343173/94‑1 (MQ=60)

                                                                 TCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTA                             <  SRR4302540.4942932/94‑1 (MQ=60)

                                                                  CGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAT                            >  SRR4302540.2517248/1‑94 (MQ=60)

                                                                  CGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAT                            <  SRR4302540.631270/94‑1 (MQ=60)

                                                                  CGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAT                            >  SRR4302540.455248/1‑94 (MQ=60)

                                                                   GACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATC                           >  SRR4302540.4155575/1‑94 (MQ=60)

                                                                    ACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCT                          >  SRR4302540.8784399/1‑94 (MQ=60)

                                                                    ACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCT                          >  SRR4302540.8784406/1‑94 (MQ=60)

                                                                    ACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCT                          <  SRR4302540.73861/94‑1 (MQ=60)

                                                                    ACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCT                          >  SRR4302540.6086978/1‑94 (MQ=60)

                                                                     CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT                         >  SRR4302540.3035864/1‑94 (MQ=60)

                                                                     CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT                         >  SRR4302540.3029954/1‑94 (MQ=60)

                                                                     CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT                         >  SRR4302540.7024200/1‑94 (MQ=60)

                                                                     CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT                         >  SRR4302540.1157830/1‑94 (MQ=60)

                                                                     CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT                         >  SRR4302540.2885266/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACTAGCAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.7550997/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.5136617/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.7063692/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.7871199/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.7550996/1‑94 (MQ=60)

                                                                      GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC                        >  SRR4302540.9932161/1‑94 (MQ=60)

                                                                       TTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCC                       >  SRR4302540.169291/1‑94 (MQ=60)

                                                                        TCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCC                      >  SRR4302540.1995603/1‑94 (MQ=60)

                                                                        TCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCC                      <  SRR4302540.7467392/94‑1 (MQ=60)

                                                                        TCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCC                      <  SRR4302540.9009696/94‑1 (MQ=60)

                                                                         CATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCT                     <  SRR4302540.7128607/94‑1 (MQ=60)

                                                                         CATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCT                     >  SRR4302540.8653836/1‑94 (MQ=60)

                                                                         CATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCT                     >  SRR4302540.4076620/1‑94 (MQ=60)

                                                                         CATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCT                     <  SRR4302540.5031739/94‑1 (MQ=60)

                                                                         CATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCT                     <  SRR4302540.5403444/94‑1 (MQ=60)

                                                                         CATTTAAGTAATGAAGGACAGGCTGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCAT                     <  SRR4302540.9064130/94‑1 (MQ=60)

                                                                          ATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTG                    <  SRR4302540.6210930/94‑1 (MQ=60)

                                                                           TTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGA                   >  SRR4302540.6673854/1‑94 (MQ=60)

                                                                             TAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATGCGGACtacaggaaaaaaatgttacggtgaagtgtctgtagcccgaaa                 >  SRR4302540.9389839/1‑52 (MQ=60)

                                                                              AAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAA                >  SRR4302540.1211818/1‑94 (MQ=60)

                                                                               AGTAATGAAGGTCGGGATGCCACGACGTTACGCGGATCTGTGGTTCGGACGACCAGAAAAGTATTTTCCGGTGAAGTTTATCTTTCCGGAAAAA               >  SRR4302540.6156036/1‑94 (MQ=60)

                                                                               AGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAA               <  SRR4302540.4209676/94‑1 (MQ=60)

                                                                                GTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAA              <  SRR4302540.1764150/94‑1 (MQ=60)

                                                                                GTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAA              <  SRR4302540.3188773/94‑1 (MQ=60)

                                                                                GTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAA              <  SRR4302540.8596758/94‑1 (MQ=60)

                                                                                  AATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGCCCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATT            >  SRR4302540.8855231/1‑94 (MQ=60)

                                                                                  AATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATT            <  SRR4302540.6255304/94‑1 (MQ=60)

                                                                                  AATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATT            >  SRR4302540.3509941/1‑94 (MQ=60)

                                                                                   ATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTC           <  SRR4302540.7155815/94‑1 (MQ=60)

                                                                                    TGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCG          <  SRR4302540.2597850/94‑1 (MQ=60)

                                                                                     GAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGT         <  SRR4302540.2782704/94‑1 (MQ=60)

                                                                                     GAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAGCTTCCCTGAAAAAATTCGT         >  SRR4302540.9896000/1‑94 (MQ=60)

                                                                                      AAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTT        <  SRR4302540.510189/94‑1 (MQ=60)

                                                                                        GGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT      <  SRR4302540.9733483/94‑1 (MQ=60)

                                                                                        GGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT      <  SRR4302540.7887989/94‑1 (MQ=60)

                                                                                          TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCA    >  SRR4302540.10133740/1‑94 (MQ=60)

                                                                                          TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCA    <  SRR4302540.10117645/94‑1 (MQ=60)

                                                                                           CGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAG   >  SRR4302540.9534227/1‑94 (MQ=60)

                                                                                            GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATNTTNNCTGAAAAAATTNGTTGTCNGG  >  SRR4302540.891336/1‑94 (MQ=60)

                                                                                            GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  >  SRR4302540.851691/1‑94 (MQ=60)

                                                                                            GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  <  SRR4302540.347221/94‑1 (MQ=60)

                                                                                            GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  >  SRR4302540.1879335/1‑94 (MQ=60)

                                                                                            GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  >  SRR4302540.4891218/1‑94 (MQ=60)

CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG  >  NC_000913/800866‑801051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`