Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
804,347 |
T→C |
V549A (GTG→GCG) |
ybhJ → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 804,347 | 0 | T | C | 99.6%
| 719.1
/ NA
| 222 | V549A (GTG→GCG) | ybhJ | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (111/110); minor base G (1/0); total (112/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 231 total aligned reads displayed.
AAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTC > NC_000913/804257‑804436
|
aaGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAgcgt < 1:2908872/93‑1 (MQ=255)
ggggCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGc < 1:4125699/93‑1 (MQ=255)
ggCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTc < 1:3952458/93‑1 (MQ=255)
gCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCg > 2:6082698/1‑93 (MQ=255)
aaCTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGaa > 2:1043715/1‑93 (MQ=255)
aaCTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGaa < 1:3854838/93‑1 (MQ=255)
aaCTCAGCAACCGCTGATTAACGGGCCGATGATGAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGaa < 2:5641034/93‑1 (MQ=255)
cTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGa < 2:3159094/93‑1 (MQ=255)
tCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGAt < 2:4629894/93‑1 (MQ=255)
aGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATcc < 1:3833063/93‑1 (MQ=255)
aGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATcc > 2:3901423/1‑93 (MQ=255)
aGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATcc > 1:2120455/1‑93 (MQ=255)
aGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATcc < 1:5400978/93‑1 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTTAAGACTGGCCGGGATTGGGTGCGCTGACTGACCATATCGTCGTGAACGCGTGCTCGAAGATACt > 2:350314/1‑93 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt > 2:2171742/1‑93 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt > 2:1506735/1‑93 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt < 1:4842587/93‑1 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt < 1:496250/93‑1 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt < 2:847525/93‑1 (MQ=255)
gCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCt > 1:189248/1‑93 (MQ=255)
cAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTc < 1:6064979/93‑1 (MQ=255)
ccGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTcgac < 2:1949818/93‑1 (MQ=255)
cGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTcgacg > 1:5116044/1‑93 (MQ=255)
cTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGaa > 1:311133/1‑93 (MQ=255)
cTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGaa > 1:1369564/1‑93 (MQ=255)
tGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAg < 1:963082/93‑1 (MQ=255)
tGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAg < 1:4194391/93‑1 (MQ=255)
gATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGt > 2:658053/1‑93 (MQ=255)
gATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGt > 1:3048573/1‑93 (MQ=255)
aTTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTg < 2:1389743/93‑1 (MQ=255)
aTTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTg < 2:2867465/93‑1 (MQ=255)
tttACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGa > 2:4273176/1‑93 (MQ=255)
ttACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGac < 1:468825/93‑1 (MQ=255)
aCGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGGGTGCTCGAAGATACTCGACGAAGTGacca > 1:148787/1‑93 (MQ=255)
cGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGaccac < 2:417592/93‑1 (MQ=255)
gCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGaccaccac < 1:3533581/93‑1 (MQ=255)
ccGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGaccaccacc < 1:5437874/93‑1 (MQ=255)
cGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGAACACCACcg > 1:1183364/1‑93 (MQ=255)
gAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcga < 1:84525/93‑1 (MQ=255)
aaCATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcgac < 2:1821037/93‑1 (MQ=255)
aaCATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcgac < 2:1873440/93‑1 (MQ=255)
cATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcgacga > 2:4798449/1‑93 (MQ=255)
cATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcgacga < 2:4548509/93‑1 (MQ=255)
cATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACcgacga > 1:5548036/1‑93 (MQ=255)
aTTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGaa < 1:3660688/93‑1 (MQ=255)
tAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACt < 2:1800905/93‑1 (MQ=255)
tAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACt > 1:5397657/1‑93 (MQ=255)
aaGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGa < 2:3101000/93‑1 (MQ=255)
aaGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGa > 2:4778030/1‑93 (MQ=255)
gccTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAtt > 2:3295847/3‑93 (MQ=255)
gACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAtt > 2:1781384/1‑93 (MQ=255)
aCTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAttc < 2:2210899/93‑1 (MQ=255)
tGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAttgct > 2:2961102/1‑93 (MQ=255)
ggCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAttcctt > 1:626758/1‑93 (MQ=255)
gCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCAACGAAGTGACCACCACCGACGAACTGAttccttc < 2:3783907/93‑1 (MQ=255)
ccGGAATTGGGTGAGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGAttccttcc < 1:3604059/93‑1 (MQ=255)
gAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGt > 1:6004405/1‑93 (MQ=255)
gAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCAACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGt > 2:4445666/1‑93 (MQ=255)
aaTTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTg > 1:2506507/1‑93 (MQ=255)
aaTTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGAACACCACCGACGAACTGATTCCTTCCGGTg > 2:2099552/1‑93 (MQ=255)
aTTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGa > 1:5358816/1‑93 (MQ=255)
ttGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGaa < 1:2023034/93‑1 (MQ=255)
ttGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGaa > 2:3235319/1‑93 (MQ=255)
ggTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAAcc < 2:5817155/93‑1 (MQ=255)
ggTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGACCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAAcc < 2:6213194/93‑1 (MQ=255)
tGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACctc < 2:1106681/93‑1 (MQ=255)
gcgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACctct < 1:4170134/93‑1 (MQ=255)
gcgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACctct < 2:3967218/93‑1 (MQ=255)
gcgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACctct < 1:3691155/93‑1 (MQ=255)
cgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCtctt < 2:6050797/93‑1 (MQ=255)
cgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCtctt < 2:1612328/93‑1 (MQ=255)
cgcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCtctt < 1:4814135/93‑1 (MQ=255)
gcTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGCCCACCACCGACGAACTGATTCCTTCCGGTGAAACCtcttc < 1:2600217/93‑1 (MQ=255)
ctgactgaCAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCtcttct > 2:5559712/1‑93 (MQ=255)
tgactgacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTcttctt < 1:3337086/93‑1 (MQ=255)
tgactgacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTcttctt < 2:2368534/93‑1 (MQ=255)
tgactgacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTcttctt > 2:3672908/1‑93 (MQ=255)
gactgacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTa > 2:1431943/1‑93 (MQ=255)
gacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGt < 1:4223538/93‑1 (MQ=255)
gacAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGt > 2:760434/1‑93 (MQ=255)
acAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGtt < 2:3055779/93‑1 (MQ=255)
cAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTc > 1:5929397/1‑93 (MQ=255)
aaTATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCa < 1:1020240/93‑1 (MQ=255)
aaTATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCa > 1:5707699/1‑93 (MQ=255)
atatCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCaa > 1:5627766/1‑93 (MQ=255)
atCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAAt < 2:4327147/93‑1 (MQ=255)
atCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAAt > 2:5435566/1‑93 (MQ=255)
atCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAAt < 2:2697578/93‑1 (MQ=255)
tCGTCCTGAAAGCGTGCTCGAAGATCCGCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATc < 2:2577493/93‑1 (MQ=255)
gTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCg > 1:2422271/1‑93 (MQ=255)
gTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCg > 1:67076/1‑93 (MQ=255)
cTGAAAGGGTGCCCCAAGAAGCTCGACGAAGTGACCCCCACCCACGAACTGATTCCTTCCGGTGAAGCCACTTCTTATCGTTCAAATCCGGtt < 2:5073669/93‑1 (MQ=255)
cTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGAtt > 2:3461915/1‑93 (MQ=255)
cTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGAtt > 1:4110319/1‑93 (MQ=255)
cTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGAtt < 2:5727321/93‑1 (MQ=255)
cTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGAtt < 1:4591761/93‑1 (MQ=255)
tGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTg > 2:5953258/1‑93 (MQ=255)
tGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTg > 2:2531387/1‑93 (MQ=255)
tGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTg > 1:700682/1‑93 (MQ=255)
aaaGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGt > 2:5031026/1‑93 (MQ=255)
|
AAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTC > NC_000913/804257‑804436
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCTG > NC_000913/804254‑804438
|
TGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGC > SRR4302533.6274191/1‑94 (MQ=60)
TGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGC < SRR4302533.888552/94‑1 (MQ=60)
TGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGC > SRR4302533.4859725/1‑94 (MQ=60)
AAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTG < SRR4302533.4151295/94‑1 (MQ=60)
AAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTG < SRR4302533.2926728/94‑1 (MQ=60)
GGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCT < SRR4302533.4150744/94‑1 (MQ=60)
GGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCG < SRR4302533.3976559/94‑1 (MQ=60)
GCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGA > SRR4302533.1939904/1‑94 (MQ=60)
AACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAG < SRR4302533.3878379/94‑1 (MQ=60)
AACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAG < SRR4302533.68354/94‑1 (MQ=60)
ACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGA > SRR4302533.405682/1‑94 (MQ=60)
TCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATC < SRR4302533.5458707/94‑1 (MQ=60)
CAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCC > SRR4302533.2133530/1‑94 (MQ=60)
AGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCT < SRR4302533.5433433/94‑1 (MQ=60)
AGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCT > SRR4302533.190427/1‑94 (MQ=60)
AGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCT < SRR4302533.3856490/94‑1 (MQ=60)
GCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTC < SRR4302533.4871937/94‑1 (MQ=60)
GCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTC < SRR4302533.499211/94‑1 (MQ=60)
CAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCG < SRR4302533.3343802/94‑1 (MQ=60)
CAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCG < SRR4302533.6101689/94‑1 (MQ=60)
AACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGA > SRR4302533.642487/1‑94 (MQ=60)
CCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACG > SRR4302533.5146963/1‑94 (MQ=60)
CGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGA > SRR4302533.2215360/1‑94 (MQ=60)
GCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAA > SRR4302533.1377795/1‑94 (MQ=60)
GCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAA > SRR4302533.313038/1‑94 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT > SRR4302533.4150593/1‑94 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT < SRR4302533.2388505/94‑1 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT < SRR4302533.254962/94‑1 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT < SRR4302533.4219778/94‑1 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT > SRR4302533.6210051/1‑94 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT > SRR4302533.3067237/1‑94 (MQ=60)
TGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGT < SRR4302533.968740/94‑1 (MQ=60)
GATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTG > SRR4302533.1148790/1‑94 (MQ=60)
GATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATACTCGACGAAGTG > SRR4302533.1456056/1‑94 (MQ=60)
ATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGA < SRR4302533.3955526/94‑1 (MQ=60)
TTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACC < SRR4302533.471623/94‑1 (MQ=60)
TACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGGGTGCTCGAAGATACTCGACGAAGTGACCA > SRR4302533.149736/1‑94 (MQ=60)
GGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGGCGGAGTGACAACCAC > SRR4302533.4947413/1‑94 (MQ=60)
GGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCAC < SRR4302533.1578864/94‑1 (MQ=60)
GGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCAC > SRR4302533.905392/1‑94 (MQ=60)
GCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACC < SRR4302533.3555354/94‑1 (MQ=60)
CCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCG < SRR4302533.3659736/94‑1 (MQ=60)
CCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCG < SRR4302533.5470627/94‑1 (MQ=60)
CCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGAACACCACCG > SRR4302533.1190470/1‑94 (MQ=60)
CGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGC > SRR4302533.3723006/1‑94 (MQ=60)
GAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGAC < SRR4302533.85067/94‑1 (MQ=60)
ACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGA > SRR4302533.5581541/1‑94 (MQ=60)
ACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGA > SRR4302533.5427068/1‑94 (MQ=60)
ATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAAC < SRR4302533.3683196/94‑1 (MQ=60)
TTAAAGACTGGCCGGAATTGGGTTCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACT < SRR4302533.3704601/94‑1 (MQ=60)
TTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACT > SRR4302533.4755164/1‑94 (MQ=60)
TTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACT > SRR4302533.5430092/1‑94 (MQ=60)
CTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCT < SRR4302533.6239621/94‑1 (MQ=60)
TGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTT > SRR4302533.630440/1‑94 (MQ=60)
GGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTC < SRR4302533.5777320/94‑1 (MQ=60)
GGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTC > SRR4302533.417987/1‑94 (MQ=60)
GCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCC < SRR4302533.4370289/94‑1 (MQ=60)
GCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCC < SRR4302533.3579670/94‑1 (MQ=60)
CCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCT < SRR4302533.5142151/94‑1 (MQ=60)
CCGGAATTGGGTGAGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCG < SRR4302533.3626241/94‑1 (MQ=60)
CGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGG > SRR4302533.1685593/1‑94 (MQ=60)
GGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGT > SRR4302533.6040786/1‑94 (MQ=60)
GGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGT < SRR4302533.5432392/94‑1 (MQ=60)
GGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGT > SRR4302533.5661752/1‑94 (MQ=60)
GAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTG > SRR4302533.2521958/1‑94 (MQ=60)
AATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGA < SRR4302533.932300/94‑1 (MQ=60)
AATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGA > SRR4302533.5390984/1‑94 (MQ=60)
AATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGA < SRR4302533.575677/94‑1 (MQ=60)
ATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAA < SRR4302533.3288520/94‑1 (MQ=60)
TTGGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAA < SRR4302533.2035523/94‑1 (MQ=60)
GGGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACC < SRR4302533.5174345/94‑1 (MQ=60)
GGTGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCT < SRR4302533.2719002/94‑1 (MQ=60)
TGCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCT > SRR4302533.2808316/1‑94 (MQ=60)
GCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTT < SRR4302533.3957635/94‑1 (MQ=60)
GCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTT > SRR4302533.4678671/1‑94 (MQ=60)
GCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTT > SRR4302533.3693980/1‑94 (MQ=60)
GCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTT < SRR4302533.4195403/94‑1 (MQ=60)
GCGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTT < SRR4302533.3713833/94‑1 (MQ=60)
CGCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTC < SRR4302533.4843315/94‑1 (MQ=60)
GCTGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGCCCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCT < SRR4302533.2616194/94‑1 (MQ=60)
TGACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTA < SRR4302533.3357708/94‑1 (MQ=60)
GACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTAT < SRR4302533.6037791/94‑1 (MQ=60)
GACTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTAT > SRR4302533.308274/1‑94 (MQ=60)
CTGACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCG > SRR4302533.5522424/1‑94 (MQ=60)
GACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTT < SRR4302533.4249072/94‑1 (MQ=60)
GACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTT < SRR4302533.352100/94‑1 (MQ=60)
ACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTC > SRR4302533.5965240/1‑94 (MQ=60)
ACAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTC < SRR4302533.6076176/94‑1 (MQ=60)
CAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCA > SRR4302533.767988/1‑94 (MQ=60)
CAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCA > SRR4302533.5742176/1‑94 (MQ=60)
CAATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCA > SRR4302533.4851418/1‑94 (MQ=60)
AATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAA > SRR4302533.5661791/1‑94 (MQ=60)
AATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAA < SRR4302533.1026234/94‑1 (MQ=60)
AATATCGTCCTGAAAGCGTGATAGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGCGAAACCTCTTCTTATCGTTCAA > SRR4302533.4967717/1‑94 (MQ=60)
ATATCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAA > SRR4302533.5512881/1‑94 (MQ=60)
TCGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCC < SRR4302533.4206170/94‑1 (MQ=60)
CGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCG < SRR4302533.4245934/94‑1 (MQ=60)
CGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCG > SRR4302533.67512/1‑94 (MQ=60)
CGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCG > SRR4302533.2519451/1‑94 (MQ=60)
CGTCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCG > SRR4302533.2437224/1‑94 (MQ=60)
TCCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGAT > SRR4302533.2113050/1‑94 (MQ=60)
CCTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATT > SRR4302533.4135303/1‑94 (MQ=60)
CTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTG > SRR4302533.5684683/1‑94 (MQ=60)
CTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTG < SRR4302533.4619578/94‑1 (MQ=60)
CTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTG < SRR4302533.3878075/94‑1 (MQ=60)
CTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTG > SRR4302533.704829/1‑94 (MQ=60)
CTGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTG > SRR4302533.1293215/1‑94 (MQ=60)
TGAAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGG > SRR4302533.4258865/1‑94 (MQ=60)
AAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTC > SRR4302533.2952045/1‑94 (MQ=60)
AAAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTC > SRR4302533.971591/1‑94 (MQ=60)
AAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCT < SRR4302533.5391659/94‑1 (MQ=60)
AAGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCT > SRR4302533.1513408/1‑94 (MQ=60)
AGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAGCCTCTTCTTATCGTTCAAATCCGATTGGTCTG < SRR4302533.2547989/94‑1 (MQ=60)
AGCGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCTG < SRR4302533.2547990/94‑1 (MQ=60)
|
TGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCTG > NC_000913/804254‑804438
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
