Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
800,958 |
A→G |
Q326R (CAG→CGG) |
ybhH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 800,958 | 0 | A | G | 100.0%
| 649.9
/ NA
| 201 | Q326R (CAG→CGG) | ybhH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/112); total (89/112) |
Only 100 of 203 total aligned reads displayed.
CCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT > NC_000913/800868‑801047
|
cccGACAAATCGTCCCTTCTGTAGGA‑ACGGCAATATCAATATTGAACCCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa < 2:5034424/93‑1 (MQ=255)
ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa > 2:5876797/1‑93 (MQ=255)
ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa < 2:3449880/93‑1 (MQ=255)
ccGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGa < 1:1949607/93‑1 (MQ=255)
cGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAt > 2:4449063/1‑93 (MQ=255)
gACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATg > 2:2328113/1‑93 (MQ=255)
gACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATg > 1:1065703/1‑93 (MQ=255)
aCAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGc > 1:4069397/1‑93 (MQ=255)
cAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGcc < 2:1036630/93‑1 (MQ=255)
aaaTCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCa < 1:3455654/93‑1 (MQ=255)
tCGTCTCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacga < 2:5803716/93‑1 (MQ=255)
tCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacga < 2:120766/93‑1 (MQ=255)
cGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacgac < 1:1555260/93‑1 (MQ=255)
gTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacgacg > 2:4883815/1‑93 (MQ=255)
gTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCacgacg > 2:4223314/1‑93 (MQ=255)
tCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGt > 2:2833560/1‑93 (MQ=255)
tCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGt < 2:4582784/93‑1 (MQ=255)
cccTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGtt > 1:4192686/1‑93 (MQ=255)
cccTTCTGTAGGATACGACAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGtt < 1:4379761/93‑1 (MQ=255)
ttCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcg < 1:829932/93‑1 (MQ=255)
ttCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcg > 2:5172475/1‑93 (MQ=255)
tCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcgc < 1:48494/93‑1 (MQ=255)
tCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAcgc < 2:1516439/93‑1 (MQ=255)
gTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCa < 2:812643/93‑1 (MQ=255)
gTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCa > 2:3229294/1‑93 (MQ=255)
aGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATc < 2:1808682/93‑1 (MQ=255)
aGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATc < 1:3641496/93‑1 (MQ=255)
ggATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCt > 2:1252584/1‑93 (MQ=255)
gATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTg > 2:6000451/1‑93 (MQ=255)
tACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGtt < 2:5259810/93‑1 (MQ=255)
aCGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTa < 2:900701/93‑1 (MQ=255)
ggCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAtt > 1:3622126/1‑93 (MQ=255)
ggCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAtt > 2:5486527/1‑93 (MQ=255)
ggCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAtt < 2:1451873/93‑1 (MQ=255)
ggCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAtt < 1:6075160/93‑1 (MQ=255)
ggCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTAtt < 1:911832/93‑1 (MQ=255)
gCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTc < 1:299062/93‑1 (MQ=255)
gCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTc < 2:631667/93‑1 (MQ=255)
aatatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCgg < 1:3676368/93‑1 (MQ=255)
aatatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCgg < 2:5674926/93‑1 (MQ=255)
atatcaatatTGAACTCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGga < 1:4467055/93‑1 (MQ=255)
atatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGga > 2:1628315/1‑93 (MQ=255)
tatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgac < 1:1385087/93‑1 (MQ=255)
tatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgac < 2:3983185/93‑1 (MQ=255)
tatcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgac < 2:2244413/93‑1 (MQ=255)
tcaatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGgacga < 2:2427368/93‑1 (MQ=255)
aatatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGAcc > 2:2101239/1‑93 (MQ=255)
atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa > 1:2889907/1‑93 (MQ=255)
atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa < 1:2647154/93‑1 (MQ=255)
atatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCa < 2:1705804/93‑1 (MQ=255)
tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg < 1:453075/93‑1 (MQ=255)
tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg < 1:2247106/93‑1 (MQ=255)
tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg > 1:2612794/1‑93 (MQ=255)
tatTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAg < 1:5251107/93‑1 (MQ=255)
ttGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaa > 2:3729605/1‑93 (MQ=255)
aaCACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGaaaaa < 1:5921544/93‑1 (MQ=255)
actccccAGTGGTGCGCTCGACGTTCATGTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAat < 2:705609/90‑1 (MQ=255)
acacCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAat < 1:4677797/93‑1 (MQ=255)
acacCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAat < 2:5512541/93‑1 (MQ=255)
cacCCCGGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAata < 2:4292918/93‑1 (MQ=255)
cacCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAata > 1:4335934/1‑93 (MQ=255)
acCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAatat > 2:2572142/1‑93 (MQ=255)
ccccAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAtt < 1:2842118/93‑1 (MQ=255)
cAGTGGTGCGTTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTc > 2:3855014/1‑93 (MQ=255)
cAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTc > 1:1124069/1‑93 (MQ=255)
aGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTcc > 1:1696971/1‑93 (MQ=255)
aGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTcc > 1:1216269/1‑93 (MQ=255)
aGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTcc < 2:4780425/93‑1 (MQ=255)
gtggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCg < 2:2491719/93‑1 (MQ=255)
tggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCgg < 2:4626485/93‑1 (MQ=255)
tggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCgg < 2:4816612/93‑1 (MQ=255)
ggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAGGACCAGAAAAATATTTTCCggg > 1:2803354/1‑92 (MQ=255)
ggtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGt < 2:5973233/93‑1 (MQ=255)
gtgCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTg > 1:5298149/1‑93 (MQ=255)
cgcTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAg > 2:5352626/1‑93 (MQ=255)
gcTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGt < 1:5376896/93‑1 (MQ=255)
gcTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGt > 2:4817622/1‑93 (MQ=255)
cTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGtt > 2:4914934/1‑93 (MQ=255)
tCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGttt > 2:5555503/1‑93 (MQ=255)
cGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTa < 1:735439/93‑1 (MQ=255)
gACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAt > 2:6287527/1‑93 (MQ=255)
aCGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATc < 2:4038249/93‑1 (MQ=255)
cGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCt < 2:2660575/93‑1 (MQ=255)
gTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCtt > 1:5988958/1‑93 (MQ=255)
tCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTcc > 1:5081208/1‑93 (MQ=255)
tCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTcc > 1:2333356/1‑93 (MQ=255)
tCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTcc > 2:1367284/1‑93 (MQ=255)
cATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTtcc > 1:1866419/1‑93 (MQ=255)
cATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTccc < 2:3505753/93‑1 (MQ=255)
cATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTccc < 2:336108/93‑1 (MQ=255)
tttAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTg > 2:2748077/1‑93 (MQ=255)
tttAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTg > 2:6153075/1‑93 (MQ=255)
aaTGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAAt > 1:2493853/1‑93 (MQ=255)
tGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTc < 1:5130444/93‑1 (MQ=255)
tGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTc > 1:6118631/1‑93 (MQ=255)
tGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTc > 1:3887911/1‑93 (MQ=255)
aaGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGt > 1:179819/1‑93 (MQ=255)
aaGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGt > 2:4106900/1‑93 (MQ=255)
aGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGtt > 2:6093612/1‑93 (MQ=255)
gTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGt < 1:1772550/93‑1 (MQ=255)
|
CCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT > NC_000913/800868‑801047
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG > NC_000913/800865‑801051
|
TCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCG < SRR4302533.5704237/94‑1 (MQ=60)
TCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCG < SRR4302533.3664761/94‑1 (MQ=60)
CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACGCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGG < SRR4302533.4030070/94‑1 (MQ=60)
CACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGG > SRR4302533.5959821/1‑94 (MQ=60)
CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT < SRR4302533.1961491/94‑1 (MQ=60)
CCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGAT < SRR4302533.4494834/94‑1 (MQ=60)
CGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATG > SRR4302533.908856/1‑94 (MQ=60)
CGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATG > SRR4302533.1071963/1‑94 (MQ=60)
GACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGC > SRR4302533.4094170/1‑94 (MQ=60)
AAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCAC < SRR4302533.3476981/94‑1 (MQ=60)
TCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGAC > SRR4302533.1208657/1‑94 (MQ=60)
CGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACG < SRR4302533.1564622/94‑1 (MQ=60)
TCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTT > SRR4302533.4218063/1‑94 (MQ=60)
CCCTTCTGTAGGATACGACAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTA < SRR4302533.4406204/94‑1 (MQ=60)
CCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTAC < SRR4302533.1080763/94‑1 (MQ=60)
CTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACG < SRR4302533.4100894/94‑1 (MQ=60)
CTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACG < SRR4302533.6053566/94‑1 (MQ=60)
TTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGC < SRR4302533.834798/94‑1 (MQ=60)
TCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCG < SRR4302533.48831/94‑1 (MQ=60)
TCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCG > SRR4302533.4261870/1‑94 (MQ=60)
TCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCG > SRR4302533.6024311/1‑94 (MQ=60)
AGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT < SRR4302533.3663890/94‑1 (MQ=60)
AGCATACGGCAATATCAATATTGATCACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCT < SRR4302533.6121555/94‑1 (MQ=60)
ATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTT < SRR4302533.460203/94‑1 (MQ=60)
CGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATT > SRR4302533.3644415/1‑94 (MQ=60)
CGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATT < SRR4302533.1927828/94‑1 (MQ=60)
GGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTC < SRR4302533.917180/94‑1 (MQ=60)
GGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTC < SRR4302533.6111907/94‑1 (MQ=60)
GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG < SRR4302533.300893/94‑1 (MQ=60)
GCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCG < SRR4302533.1781925/94‑1 (MQ=60)
CAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGG < SRR4302533.4370443/94‑1 (MQ=60)
CAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGG < SRR4302533.3660551/94‑1 (MQ=60)
CAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGG < SRR4302533.2912099/94‑1 (MQ=60)
AATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGA < SRR4302533.3698963/94‑1 (MQ=60)
ATATCAATATTGAACTCCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAC < SRR4302533.4494071/94‑1 (MQ=60)
TATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACG < SRR4302533.1393421/94‑1 (MQ=60)
CAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACC > SRR4302533.787442/1‑94 (MQ=60)
AATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCA > SRR4302533.2907673/1‑94 (MQ=60)
AATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCA < SRR4302533.2494845/94‑1 (MQ=60)
ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG < SRR4302533.2663418/94‑1 (MQ=60)
ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG > SRR4302533.2628831/1‑94 (MQ=60)
ATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAG < SRR4302533.5164667/94‑1 (MQ=60)
TATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGA < SRR4302533.455785/94‑1 (MQ=60)
TATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGA < SRR4302533.5282660/94‑1 (MQ=60)
TATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGA < SRR4302533.2260992/94‑1 (MQ=60)
ATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAA > SRR4302533.2630064/1‑94 (MQ=60)
AACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAAT < SRR4302533.5957338/94‑1 (MQ=60)
AACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAAT < SRR4302533.2309981/94‑1 (MQ=60)
ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA < SRR4302533.4706145/94‑1 (MQ=60)
ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA > SRR4302533.4362064/1‑94 (MQ=60)
ACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATA < SRR4302533.1676108/94‑1 (MQ=60)
CACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATAT < SRR4302533.2723789/94‑1 (MQ=60)
CCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTT < SRR4302533.2859772/94‑1 (MQ=60)
CCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTT < SRR4302533.2859611/94‑1 (MQ=60)
CCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTT > SRR4302533.1316968/1‑94 (MQ=60)
CCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTC > SRR4302533.1130739/1‑94 (MQ=60)
CCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTC > SRR4302533.5151863/1‑94 (MQ=60)
CCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGAATGCCACGACGTTACGCGCATCTGTTATGCGGACGACCAGAAAAATATTTTC < SRR4302533.3261593/94‑1 (MQ=60)
CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC > SRR4302533.1223574/1‑94 (MQ=60)
CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC > SRR4302533.1707249/1‑94 (MQ=60)
CAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCC < SRR4302533.5316868/94‑1 (MQ=60)
AGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCG > SRR4302533.5067656/1‑94 (MQ=60)
GTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGG < SRR4302533.1517222/94‑1 (MQ=60)
TGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGAGGACCAGAAAAATATTTTCCGGG > SRR4302533.2820606/1‑94 (MQ=60)
GGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTG > SRR4302533.5329888/1‑94 (MQ=60)
CGCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGT < SRR4302533.3546721/94‑1 (MQ=60)
GCTCGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTT < SRR4302533.5409211/94‑1 (MQ=60)
CGACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTAT < SRR4302533.739765/94‑1 (MQ=60)
GACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATC > SRR4302533.448375/1‑94 (MQ=60)
ACGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCT < SRR4302533.1806446/94‑1 (MQ=60)
CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT > SRR4302533.3677754/1‑94 (MQ=60)
CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT > SRR4302533.6191593/1‑94 (MQ=60)
CGTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTT > SRR4302533.6025230/1‑94 (MQ=60)
GTTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTC > SRR4302533.1977884/1‑94 (MQ=60)
TTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCC > SRR4302533.5111917/1‑94 (MQ=60)
TTCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCC > SRR4302533.2347803/1‑94 (MQ=60)
TCATTTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTTCC > SRR4302533.1877802/1‑94 (MQ=60)
TTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGCA > SRR4302533.1825360/1‑94 (MQ=60)
TTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAA > SRR4302533.4049917/1‑94 (MQ=60)
TTAAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAA > SRR4302533.5228173/1‑94 (MQ=60)
AAGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAA > SRR4302533.4870228/1‑94 (MQ=60)
AGTAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAA < SRR4302533.5382828/94‑1 (MQ=60)
TAATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAAT > SRR4302533.2509237/1‑94 (MQ=60)
ATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTC > SRR4302533.6155532/1‑94 (MQ=60)
ATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTC > SRR4302533.3911631/1‑94 (MQ=60)
ATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTC < SRR4302533.2842513/94‑1 (MQ=60)
ATGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTC < SRR4302533.2587967/94‑1 (MQ=60)
TGAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCG < SRR4302533.5161435/94‑1 (MQ=60)
GAAGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGT > SRR4302533.180943/1‑94 (MQ=60)
AGGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTG < SRR4302533.3784219/94‑1 (MQ=60)
GGTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGT < SRR4302533.5480281/94‑1 (MQ=60)
GTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTC < SRR4302533.988511/94‑1 (MQ=60)
GTCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTC < SRR4302533.1783344/94‑1 (MQ=60)
TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAACAATTCGTTGTCA > SRR4302533.1994094/1‑94 (MQ=60)
TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCA < SRR4302533.4302883/94‑1 (MQ=60)
TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCA < SRR4302533.4299781/94‑1 (MQ=60)
TCGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCA > SRR4302533.1994095/1‑94 (MQ=60)
CGGGATGCCACGACGTTACGCGTATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAG < SRR4302533.3909023/94‑1 (MQ=60)
CGGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAG > SRR4302533.4619811/1‑94 (MQ=60)
GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG < SRR4302533.5625559/94‑1 (MQ=60)
GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG > SRR4302533.2572766/1‑94 (MQ=60)
GGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG < SRR4302533.2206206/94‑1 (MQ=60)
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TCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGAAAAAATTCGTTGTCAGG > NC_000913/800865‑801051
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
