Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
891,504 |
A→G |
Q105Q (CAA→CAG) |
rimK → |
ribosomal protein S6 modification protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 891,504 | 0 | A | G | 100.0%
| 784.7
/ NA
| 242 | Q105Q (CAA→CAG) | rimK | ribosomal protein S6 modification protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/111); total (131/111) |
Only 100 of 252 total aligned reads displayed.
GGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGG > NC_000913/891414‑891593
|
cggcgcCAGTGAGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGctgctg < 2:3328880/91‑1 (MQ=255)
cTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGctgctg < 1:4951166/93‑1 (MQ=255)
tGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTgg > 1:571950/1‑93 (MQ=255)
tGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTgg > 2:2157425/1‑93 (MQ=255)
tGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTgg > 2:4535866/1‑93 (MQ=255)
gcgcCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGgc > 2:1197539/1‑93 (MQ=255)
gcCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGgcgc > 2:2524689/1‑93 (MQ=255)
ccAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGcgcg > 1:3583098/1‑93 (MQ=255)
aGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTc > 1:5810855/1‑93 (MQ=255)
aGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTc < 1:1254336/93‑1 (MQ=255)
gTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCa > 1:1750537/1‑93 (MQ=255)
ttCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAg < 2:89499/93‑1 (MQ=255)
ttCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAg < 1:326269/93‑1 (MQ=255)
ttCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAg < 2:346616/93‑1 (MQ=255)
ttCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAg < 1:2674861/93‑1 (MQ=255)
ttCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAg < 2:5836652/93‑1 (MQ=255)
tCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAgg < 2:1018955/93‑1 (MQ=255)
tCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAgg < 1:4774984/93‑1 (MQ=255)
cGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAggc > 1:4851464/1‑92 (MQ=255)
gagaTGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGc > 1:3159450/1‑93 (MQ=255)
gagaTGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGc > 1:5958200/1‑93 (MQ=255)
agaTGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCa > 2:5793234/1‑93 (MQ=255)
gaTGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCAt < 1:1846286/93‑1 (MQ=255)
tGCTGGGTAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCg > 1:740783/1‑93 (MQ=255)
gCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGa < 2:1912866/93‑1 (MQ=255)
cTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGAc > 2:598392/1‑93 (MQ=255)
ggAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGAcctgc > 2:165258/1‑93 (MQ=255)
gAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGAcctgcc < 2:2328085/93‑1 (MQ=255)
cTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGGAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGt < 2:3834293/93‑1 (MQ=255)
aTCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTcc > 2:5702716/1‑92 (MQ=255)
aTCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCa > 1:1913765/1‑93 (MQ=255)
tCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCAc < 1:4343420/93‑1 (MQ=255)
tCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCAc > 2:2575908/1‑93 (MQ=255)
cGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACgg < 2:4041998/93‑1 (MQ=255)
cGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACgg > 1:1012402/1‑93 (MQ=255)
cGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACgg > 1:4030771/1‑93 (MQ=255)
gCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACggg > 2:2797128/1‑93 (MQ=255)
gCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACggg > 2:437297/1‑93 (MQ=255)
tCAATGGGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGGCAGGCCATCGACCTGCCTGTCACGGGCa < 2:1138919/93‑1 (MQ=255)
cAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCAt < 1:4781685/93‑1 (MQ=255)
aaTGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGCCCTGCCTGTCACGGGCAtt < 2:1744309/93‑1 (MQ=255)
aaTGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCAtt < 2:4265118/93‑1 (MQ=255)
aTGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTg > 2:5113955/1‑93 (MQ=255)
tGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTgc < 1:5194900/93‑1 (MQ=255)
gAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTgcg > 2:2076664/1‑93 (MQ=255)
tcggtcgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCAt > 1:4400140/1‑93 (MQ=255)
cggtcgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCAtt < 1:3425608/93‑1 (MQ=255)
gtcgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCg > 1:4645607/1‑93 (MQ=255)
gtcgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCg > 1:5559530/1‑93 (MQ=255)
tcgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGc < 2:2660002/93‑1 (MQ=255)
cgCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGcc < 1:910667/93‑1 (MQ=255)
gCCATTGCCCGGGCGCGTGACAAATTGCGTTGCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTTTCGAGGGGAATGCGCATTCGCCg > 2:141274/1‑93 (MQ=255)
gCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCg < 1:2545801/93‑1 (MQ=255)
ccATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCgg < 2:6047744/93‑1 (MQ=255)
ccATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCgg > 1:4240205/1‑93 (MQ=255)
cATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGga < 2:614629/93‑1 (MQ=255)
aTTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgat > 2:5377699/1‑93 (MQ=255)
aTTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgat < 1:5235672/93‑1 (MQ=255)
aTTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgat < 2:4716556/93‑1 (MQ=255)
aTTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgat > 2:2658886/1‑93 (MQ=255)
ttGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgatg > 2:1566140/1‑93 (MQ=255)
tGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGCCCTGCCTGTCACGGGCATTGCGCATTCGCCGgatga < 1:1870320/93‑1 (MQ=255)
gCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGgatgat < 2:73028/93‑1 (MQ=255)
cccGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATa < 1:2862544/93‑1 (MQ=255)
cccGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATa < 1:3291951/93‑1 (MQ=255)
cccGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATa > 1:585596/1‑93 (MQ=255)
ccGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAc < 1:4311792/93‑1 (MQ=255)
ccGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAc < 2:4287319/93‑1 (MQ=255)
cGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAcc < 2:15165/93‑1 (MQ=255)
gcgcGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGc > 2:2744275/1‑93 (MQ=255)
gcgcGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGc < 1:2995346/93‑1 (MQ=255)
gcgTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGa < 1:2749404/93‑1 (MQ=255)
gTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGAtt > 2:5085289/1‑93 (MQ=255)
gTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGAtt > 2:3122332/1‑93 (MQ=255)
tGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGAttt > 2:575494/1‑93 (MQ=255)
gACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTa < 1:5639514/93‑1 (MQ=255)
aCAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTaa < 1:1152504/93‑1 (MQ=255)
cAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACTAGCGATTTAAt > 2:694858/1‑93 (MQ=255)
aaaTTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTgcgc < 2:296158/64‑1 (MQ=255)
aaaTTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATc < 1:3401835/93‑1 (MQ=255)
aaTTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCg > 1:545142/1‑93 (MQ=255)
aTTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGa > 1:600973/1‑93 (MQ=255)
tGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACa < 2:3087622/93‑1 (MQ=255)
tGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACa > 1:2955567/1‑93 (MQ=255)
tGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACa < 1:671373/93‑1 (MQ=255)
gCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACAt < 1:3826159/93‑1 (MQ=255)
cGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATg > 2:2465253/1‑93 (MQ=255)
gTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATgg > 1:212540/1‑93 (MQ=255)
gTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATgg > 2:4803422/1‑93 (MQ=255)
ttCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTTCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGt < 1:3101879/93‑1 (MQ=255)
tcccATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGt < 2:5246561/91‑1 (MQ=255)
tCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTc < 1:2336274/93‑1 (MQ=255)
tCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTc > 2:1996199/1‑93 (MQ=255)
tCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTc < 2:2898485/93‑1 (MQ=255)
cATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTATCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCgg > 1:1084994/1‑93 (MQ=255)
aTGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggt < 2:3626217/93‑1 (MQ=255)
tGCAGCTGCTGGCGCGTCAGGTCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtg < 2:6274512/93‑1 (MQ=255)
tGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtg < 2:1069614/93‑1 (MQ=255)
tGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtg > 2:1404/1‑93 (MQ=255)
tGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtg < 1:3932715/93‑1 (MQ=255)
|
GGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGG > NC_000913/891414‑891593
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCG > NC_000913/891411‑891597
|
GGCGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAG < SRR4302533.3176839/94‑1 (MQ=60)
CGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCT < SRR4302533.4261065/94‑1 (MQ=60)
CGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCT < SRR4302533.209054/94‑1 (MQ=60)
CGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCT > SRR4302533.5151153/1‑94 (MQ=60)
GGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTG < SRR4302533.28158/94‑1 (MQ=60)
CTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGG > SRR4302533.575326/1‑94 (MQ=60)
CTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGG < SRR4302533.4981150/94‑1 (MQ=60)
TGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGC < SRR4302533.1890654/94‑1 (MQ=60)
GCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCG < SRR4302533.5707135/94‑1 (MQ=60)
GCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCG > SRR4302533.3605166/1‑94 (MQ=60)
GCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCG < SRR4302533.545709/94‑1 (MQ=60)
GCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCG < SRR4302533.3200964/94‑1 (MQ=60)
GCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCG > SRR4302533.4810712/1‑94 (MQ=60)
CCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGT > SRR4302533.402060/1‑94 (MQ=60)
CAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTC > SRR4302533.2542477/1‑94 (MQ=60)
CAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTC > SRR4302533.5845947/1‑94 (MQ=60)
CAGTTCGAGATGCTGGGGAGCTATCCGCTAAATGAGTCGGTCGCCCTTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTC > SRR4302533.1764617/1‑94 (MQ=60)
AGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCGATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCA > SRR4302533.4469869/1‑94 (MQ=60)
AGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCA > SRR4302533.1761196/1‑94 (MQ=60)
AGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCA < SRR4302533.1261837/94‑1 (MQ=60)
TTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGG < SRR4302533.1879387/94‑1 (MQ=60)
TTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGG < SRR4302533.328255/94‑1 (MQ=60)
TTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGG < SRR4302533.2691267/94‑1 (MQ=60)
TTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGG < SRR4302533.1089764/94‑1 (MQ=60)
TCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGG < SRR4302533.4803914/94‑1 (MQ=60)
TCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGG < SRR4302533.4276587/94‑1 (MQ=60)
TCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGC > SRR4302533.4880864/1‑94 (MQ=60)
CGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGC > SRR4302533.5994239/1‑94 (MQ=60)
CGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGC > SRR4302533.3178894/1‑94 (MQ=60)
GAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCA < SRR4302533.6008493/94‑1 (MQ=60)
GAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCA < SRR4302533.2082095/94‑1 (MQ=60)
GATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATC < SRR4302533.4791062/94‑1 (MQ=60)
GATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATC < SRR4302533.1857544/94‑1 (MQ=60)
ATGCTGGGTAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCG > SRR4302533.745141/1‑94 (MQ=60)
ATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCG < SRR4302533.4398167/94‑1 (MQ=60)
ATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCG > SRR4302533.4860548/1‑94 (MQ=60)
TGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCT > SRR4302533.724504/1‑94 (MQ=60)
CTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTC > SRR4302533.5280025/1‑94 (MQ=60)
TATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCA > SRR4302533.5613379/1‑94 (MQ=60)
TATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCA > SRR4302533.1925443/1‑94 (MQ=60)
ATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCAC > SRR4302533.2589248/1‑94 (MQ=60)
ATCCGCTAAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCAC < SRR4302533.1135791/94‑1 (MQ=60)
TCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACG < SRR4302533.435744/94‑1 (MQ=60)
TCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACG < SRR4302533.4369596/94‑1 (MQ=60)
CCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGG > SRR4302533.5881087/1‑94 (MQ=60)
CCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGG > SRR4302533.1018327/1‑94 (MQ=60)
CCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGG > SRR4302533.2701850/1‑94 (MQ=60)
CCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGG > SRR4302533.3100292/1‑94 (MQ=60)
CCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGG > SRR4302533.4055304/1‑94 (MQ=60)
CTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCA > SRR4302533.3802183/1‑94 (MQ=60)
CTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCA < SRR4302533.5562242/94‑1 (MQ=60)
CTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCA > SRR4302533.4157222/1‑94 (MQ=60)
TCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCAT > SRR4302533.4799813/1‑94 (MQ=60)
CAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATT < SRR4302533.2009720/94‑1 (MQ=60)
CAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATT < SRR4302533.4810656/94‑1 (MQ=60)
ATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGC > SRR4302533.292951/1‑94 (MQ=60)
TGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCG < SRR4302533.4052423/94‑1 (MQ=60)
TGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCG < SRR4302533.5226232/94‑1 (MQ=60)
AGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCA > SRR4302533.1369224/1‑94 (MQ=60)
AGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCA > SRR4302533.3091866/1‑94 (MQ=60)
AGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCA < SRR4302533.4941608/94‑1 (MQ=60)
GTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCAT > SRR4302533.4426708/1‑94 (MQ=60)
GTCGGTCGCCATTACCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCAT > SRR4302533.116452/1‑94 (MQ=60)
CGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTC < SRR4302533.3446768/94‑1 (MQ=60)
CGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTC < SRR4302533.3467322/94‑1 (MQ=60)
GGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCG > SRR4302533.4673760/1‑94 (MQ=60)
GGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCG > SRR4302533.5593132/1‑94 (MQ=60)
GGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCG < SRR4302533.5779240/94‑1 (MQ=60)
GGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCG > SRR4302533.1867529/1‑94 (MQ=60)
GGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCG > SRR4302533.2884542/1‑94 (MQ=60)
GTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGC > SRR4302533.2385297/1‑94 (MQ=60)
TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCC < SRR4302533.3897141/94‑1 (MQ=60)
TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCC < SRR4302533.2194759/94‑1 (MQ=60)
CGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCG < SRR4302533.916008/94‑1 (MQ=60)
CGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCG < SRR4302533.5254639/94‑1 (MQ=60)
GCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGG > SRR4302533.4265814/1‑94 (MQ=60)
GCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGG < SRR4302533.2561465/94‑1 (MQ=60)
CATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGAT > SRR4302533.5801944/1‑94 (MQ=60)
ATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATG > SRR4302533.3374501/1‑94 (MQ=60)
ATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATG < SRR4302533.5267152/94‑1 (MQ=60)
ATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATG > SRR4302533.3538762/1‑94 (MQ=60)
TGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGCCCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGAT < SRR4302533.1881723/94‑1 (MQ=60)
TGCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGAT < SRR4302533.5660822/94‑1 (MQ=60)
GCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATA > SRR4302533.589048/1‑94 (MQ=60)
GCCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATA > SRR4302533.3304560/1‑94 (MQ=60)
CCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAC < SRR4302533.3438062/94‑1 (MQ=60)
CCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAC < SRR4302533.3312273/94‑1 (MQ=60)
CCCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAC < SRR4302533.2880154/94‑1 (MQ=60)
CCGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACC < SRR4302533.4337749/94‑1 (MQ=60)
CGGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCA < SRR4302533.6072868/94‑1 (MQ=60)
GGGCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAG > SRR4302533.1147113/1‑94 (MQ=60)
GCGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCG < SRR4302533.3013665/94‑1 (MQ=60)
CGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGA > SRR4302533.2734056/1‑94 (MQ=60)
CGCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGA > SRR4302533.1563936/1‑94 (MQ=60)
GCGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGAT < SRR4302533.2766260/94‑1 (MQ=60)
CGTGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTTCGCATTCGCCGGATGATACCAGCGATT > SRR4302533.6345394/1‑94 (MQ=60)
TGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTA > SRR4302533.4303706/1‑94 (MQ=60)
TGACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTA < SRR4302533.832880/94‑1 (MQ=60)
GACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAA < SRR4302533.5673605/94‑1 (MQ=60)
ACAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAAT < SRR4302533.1159407/94‑1 (MQ=60)
CAAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCAatacagcagatcggaagagcggttcagc > SRR4302533.297970/1‑66 (MQ=60)
AAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCG < SRR4302533.4376056/94‑1 (MQ=60)
AAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCG < SRR4302533.3422841/94‑1 (MQ=60)
AAATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCG > SRR4302533.548380/1‑94 (MQ=60)
AATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGA < SRR4302533.5904443/94‑1 (MQ=60)
AATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGA > SRR4302533.4807296/1‑94 (MQ=60)
AATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGA > SRR4302533.604507/1‑94 (MQ=60)
ATTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGAC > SRR4302533.847725/1‑94 (MQ=60)
TTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACA < SRR4302533.3148605/94‑1 (MQ=60)
TTGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACA > SRR4302533.2973638/1‑94 (MQ=60)
TGCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACAT < SRR4302533.675339/94‑1 (MQ=60)
GCGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATG < SRR4302533.3849548/94‑1 (MQ=60)
CGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGG < SRR4302533.5124794/94‑1 (MQ=60)
CGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGG > SRR4302533.213877/1‑94 (MQ=60)
CGTTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGG < SRR4302533.319931/94‑1 (MQ=60)
TTCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTTCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTC < SRR4302533.3120950/94‑1 (MQ=60)
TCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCG > SRR4302533.3353166/1‑94 (MQ=60)
TCCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCG < SRR4302533.2350734/94‑1 (MQ=60)
CCATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTATCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGG > SRR4302533.1091392/1‑94 (MQ=60)
ATGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTG > SRR4302533.5967708/1‑94 (MQ=60)
TGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGG > SRR4302533.3939623/1‑94 (MQ=60)
TGCAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGG < SRR4302533.3956722/94‑1 (MQ=60)
CAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTG > SRR4302533.19831/1‑94 (MQ=60)
CAGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCAATGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTG > SRR4302533.4460481/1‑94 (MQ=60)
AGCTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGC > SRR4302533.2689245/1‑94 (MQ=60)
GCTGCTGGCGCGTGAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCG < SRR4302533.2170707/94‑1 (MQ=60)
|
GGCGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCG > NC_000913/891411‑891597
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
