Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	903,232	Δ1 bp	coding (459/516 nt)	ybjP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	903,232	0	T	.	99.4%	1384.2 / ‑0.7	308	coding (459/516 nt)	ybjP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base . (114/192); minor base C (2/0); total (116/192)
Fisher's exact test for biased strand distribution p-value = 1.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 319 total aligned reads displayed.

AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA  >  NC_000913/903144‑903319

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    >  2:9443090/1‑93 (MQ=255)

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    <  2:839276/93‑1 (MQ=255)

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    >  1:5579979/1‑93 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCTATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  2:4345718/93‑1 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  2:3806895/93‑1 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGCCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  1:5187834/93‑1 (MQ=255)

       ggggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca                                                                             <  1:5919213/93‑1 (MQ=255)

         ggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtc                                                                           <  2:3234662/93‑1 (MQ=255)

         ggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtc                                                                           <  1:8268679/93‑1 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         >  1:521140/1‑93 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         >  1:4556769/1‑93 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         <  1:6816934/93‑1 (MQ=255)

           tttATTGGTTAATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         <  2:1462062/93‑1 (MQ=255)

            ttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGAGTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑ATGTAACGCACAtcgtc                                                                        <  2:9920415/93‑1 (MQ=255)

             tATTGTTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       <  2:219416/93‑1 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  1:8471348/1‑93 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  2:5314910/1‑93 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  2:6541719/1‑93 (MQ=255)

              tttGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:2325332/92‑1 (MQ=255)

              tttGGTTGAGCATGGCTTGAGCGTTTCTCGACGGACTGACGCGCCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  1:5314912/92‑1 (MQ=255)

              aTTGGTTGCTCAAGGGGTGAGCGATTCTCGATGGCCCGAGGGGGCGTACCCGCCGTGGCCTGAAGGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:8595125/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  1:118794/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTGGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:419374/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:6645650/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      >  1:6121559/1‑93 (MQ=255)

               ttGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAt                                                                     <  2:6261862/93‑1 (MQ=255)

                  gTTGATCAGGGCGTTAGCGATTCTCGATGGACTGAGGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATggc                                                                  <  2:5445005/93‑3 (MQ=255)

                    tGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGccc                                                                >  1:1499347/1‑93 (MQ=255)

                     gATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCa                                                               <  2:4834334/93‑1 (MQ=255)

                      aTCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGAGGCATGACCGCAACCG‑CAAAGCAACTCACATAGTCTATGCCCCaa                                                              >  1:8673274/1‑93 (MQ=255)

                        cAAGGCTTTAGCGATTCACGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  1:8958314/93‑1 (MQ=255)

                        cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  2:7900689/93‑1 (MQ=255)

                        cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  2:5116536/93‑1 (MQ=255)

                         aaGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAacac                                                           >  2:9497687/1‑93 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          <  2:4543731/93‑1 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          >  2:3956833/1‑93 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          <  1:8078231/93‑1 (MQ=255)

                           ggCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTg                                                         <  1:9138889/93‑1 (MQ=255)

                             cGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGc                                                       >  1:9914729/1‑93 (MQ=255)

                              gTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGcc                                                      <  1:5743789/93‑1 (MQ=255)

                               ttAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGGC‑AAGCAACGCACATCGTCGATGGCCCAACACTGGCCt                                                     >  1:226102/1‑93 (MQ=255)

                               tgaGCGATGCTGGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCt                                                     <  2:6063947/91‑1 (MQ=255)

                                    gATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTg                                                >  1:2502144/1‑93 (MQ=255)

                                     aTTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa                                               <  2:7487761/93‑1 (MQ=255)

                                     aTTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa                                               >  1:2081857/1‑93 (MQ=255)

                                      ttCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGaa                                              >  1:188957/1‑93 (MQ=255)

                                      ttCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGaa                                              >  2:2611822/1‑93 (MQ=255)

                                       tctcGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt                                             <  1:6011419/93‑1 (MQ=255)

                                         tcGATGGACTGAGGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           <  1:8722299/93‑1 (MQ=255)

                                         tcGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           >  1:4279738/1‑93 (MQ=255)

                                         ccGATGGCCTGACGGGGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           <  1:7393426/92‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         <  1:8909482/93‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         <  2:901414/93‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         >  2:7339000/1‑93 (MQ=255)

                                            aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                        >  1:509011/1‑93 (MQ=255)

                                            aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                        >  2:3882130/1‑93 (MQ=255)

                                             tgtaCTGACAGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTaa                                       <  2:5952976/90‑1 (MQ=255)

                                              ggACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAac                                      >  2:9222787/1‑93 (MQ=255)

                                               gacggacgGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                     <  2:1042531/93‑1 (MQ=255)

                                               gACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                     >  1:1854709/1‑93 (MQ=255)

                                                aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTGacac                                    >  2:7733276/1‑93 (MQ=255)

                                                aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAacac                                    <  1:3436262/93‑1 (MQ=255)

                                                  tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACtt                                  >  2:1742016/1‑93 (MQ=255)

                                                   gACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTc                                 <  1:2802422/93‑1 (MQ=255)

                                                    ccGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa                                <  2:975901/92‑1 (MQ=255)

                                                    aCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa                                <  1:9180007/93‑1 (MQ=255)

                                                      ggAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc                              <  1:8026125/93‑1 (MQ=255)

                                                       gAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc                             >  2:1587610/1‑93 (MQ=255)

                                                       gAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc                             <  1:6422731/93‑1 (MQ=255)

                                                        aGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt                            <  2:501208/93‑1 (MQ=255)

                                                        aGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt                            <  1:669358/93‑1 (MQ=255)

                                                         gCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTg                           <  1:3234239/93‑1 (MQ=255)

                                                          cGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGc                          <  1:4073106/93‑1 (MQ=255)

                                                           gtccccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc                         <  1:3685625/90‑1 (MQ=255)

                                                            tACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa                        >  2:3684300/1‑93 (MQ=255)

                                                            tACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa                        >  1:3834122/1‑93 (MQ=255)

                                                             aCCCGCCGTGGCATGAACGCTACCTCC‑AAGTAACGCACATCGTCGATGGCCTAACACTGGCCTTCCTGAATCATTAACACTTCATACTGCCaa                       >  1:7725308/1‑93 (MQ=255)

                                                              cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc                      <  1:45420/93‑1 (MQ=255)

                                                              cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc                      <  2:5252785/93‑1 (MQ=255)

                                                               ccgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAcc                     >  1:4939068/1‑93 (MQ=255)

                                                                cgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAccc                    >  1:967355/1‑93 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCGACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  1:8560968/93‑1 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  2:2072111/93‑1 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  2:283423/93‑1 (MQ=255)

                                                                  ccgTGGCATAAACGCTACCGCC‑AAGTAACGCACATCGCCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTg                  <  1:9026833/93‑1 (MQ=255)

                                                                   cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg                 >  2:1174055/1‑93 (MQ=255)

                                                                     tGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTc               <  2:8811384/93‑1 (MQ=255)

                                                                     tGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTc               <  1:1682857/93‑1 (MQ=255)

                                                                      ggCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCa              <  1:7552705/93‑1 (MQ=255)

                                                                          tGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCt          >  1:2834558/1‑93 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  2:2481465/93‑1 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  2:7392535/93‑1 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  1:6269787/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       <  2:698362/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       <  1:7042138/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       >  1:1033389/1‑93 (MQ=255)

                                                                               gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg     <  2:8179706/93‑1 (MQ=255)

                                                                               gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg     >  1:4385120/1‑93 (MQ=255)

                                                                                cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga    >  2:6835105/1‑93 (MQ=255)

                                                                                cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga    >  1:4786832/1‑93 (MQ=255)

AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA  >  NC_000913/903144‑903319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG  >  NC_000913/903139‑903325

CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCA                                                                                               >  SRR4302540.7089297/1‑94 (MQ=60)

  GACAATTTGCGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAG                                                                                            <  SRR4302540.7023123/94‑1 (MQ=60)

  GACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAG                                                                                            <  SRR4302540.6684780/94‑1 (MQ=60)

  GACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAG                                                                                            <  SRR4302540.3418985/94‑1 (MQ=60)

    CAATTTACGGGGTTTATTGGTTGATCAATGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTA                                                                                          >  SRR4302540.5641401/1‑94 (MQ=60)

    CAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTA                                                                                          <  SRR4302540.7388407/94‑1 (MQ=60)

    CAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTA                                                                                          >  SRR4302540.5641400/1‑94 (MQ=60)

     AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAA                                                                                         >  SRR4302540.6165628/1‑94 (MQ=60)

     AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAA                                                                                         <  SRR4302540.1851093/94‑1 (MQ=60)

      ATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAC                                                                                        <  SRR4302540.5244312/94‑1 (MQ=60)

      ATTTACGGGGTTTATTGGTTGATCAAGCCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAC                                                                                        <  SRR4302540.5244311/94‑1 (MQ=60)

       TTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACG                                                                                       >  SRR4302540.7522487/1‑94 (MQ=60)

        TTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑ACGTAACGC                                                                                      >  SRR4302540.7723916/1‑94 (MQ=60)

          ACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCAC                                                                                    <  SRR4302540.7088923/94‑1 (MQ=60)

            GGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAT                                                                                  <  SRR4302540.5984606/94‑1 (MQ=60)

             GGTTTTATTGGTTGATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCTTCCCCGCCGTGGCATGAACGCTCCCGCC‑AAGTAACGCACATC                                                                                 <  SRR4302540.5147039/94‑1 (MQ=60)

             GGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATC                                                                                 >  SRR4302540.4119889/1‑94 (MQ=60)

             GGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATC                                                                                 >  SRR4302540.9236868/1‑94 (MQ=60)

             GGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATC                                                                                 >  SRR4302540.5000142/1‑94 (MQ=60)

             GGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATC                                                                                 <  SRR4302540.4981732/94‑1 (MQ=60)

              GGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCG                                                                                <  SRR4302540.8364755/94‑1 (MQ=60)

              GGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCG                                                                                >  SRR4302540.979345/1‑94 (MQ=60)

               GTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGT                                                                               >  SRR4302540.526732/1‑94 (MQ=60)

               GTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGT                                                                               >  SRR4302540.4606031/1‑94 (MQ=60)

               GTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGT                                                                               >  SRR4302540.4606032/1‑94 (MQ=60)

                TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTTGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC                                                                              <  SRR4302540.1491013/94‑1 (MQ=60)

                TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC                                                                              >  SRR4302540.1111892/1‑94 (MQ=60)

                TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC                                                                              <  SRR4302540.5011045/94‑1 (MQ=60)

                TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC                                                                              <  SRR4302540.2785453/94‑1 (MQ=60)

                TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC                                                                              <  SRR4302540.6892385/94‑1 (MQ=60)

                 TTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG                                                                             <  SRR4302540.9106728/94‑1 (MQ=60)

                 TTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG                                                                             <  SRR4302540.9106727/94‑1 (MQ=60)

                 TTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG                                                                             >  SRR4302540.8569732/1‑94 (MQ=60)

                 TGATTGGTTGATCAAGGCGTGAGCGATTCTCGATGGACGGACGGACCGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG                                                                             <  SRR4302540.8797488/94‑1 (MQ=60)

                  TATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGA                                                                            >  SRR4302540.6189739/1‑94 (MQ=60)

                  TATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGA                                                                            >  SRR4302540.6189740/1‑94 (MQ=60)

                   tttggttgagcatggcttgagcgtttctcgacggactgacgcgccgtcCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT                                                                           <  SRR4302540.5373109/46‑1 (MQ=60)

                   ATTGGTTGATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT                                                                           <  SRR4302540.120071/94‑1 (MQ=60)

                   ATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT                                                                           <  SRR4302540.5373108/94‑1 (MQ=60)

                   ATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT                                                                           >  SRR4302540.1774967/1‑94 (MQ=60)

                   ATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT                                                                           >  SRR4302540.8570760/1‑94 (MQ=60)

                    TTGGTTGATAAAGGCGTTCGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATG                                                                          <  SRR4302540.692687/94‑1 (MQ=60)

                     TGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGG                                                                         <  SRR4302540.3142938/94‑1 (MQ=60)

                      GGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGC                                                                        <  SRR4302540.2083013/94‑1 (MQ=60)

                      GGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGAACATCGTCGATGGC                                                                        >  SRR4302540.9283571/1‑94 (MQ=60)

                        TTGATCAAGGCGTTAGCGATTCTCGATGGCCTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                      <  SRR4302540.3067847/94‑1 (MQ=60)

                        TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                      >  SRR4302540.1984117/1‑94 (MQ=60)

                        TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                      >  SRR4302540.1515867/1‑94 (MQ=60)

                         TGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCA                                                                     >  SRR4302540.5010349/1‑94 (MQ=60)

                           ATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAAC                                                                   <  SRR4302540.4765800/94‑1 (MQ=60)

                           ATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAAC                                                                   >  SRR4302540.6797844/1‑94 (MQ=60)

                             CAAGGCTTTAGCGATTCACGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                 <  SRR4302540.9064202/94‑1 (MQ=60)

                             CAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                 <  SRR4302540.4908222/94‑1 (MQ=60)

                             CAAGGCGTTAGCGATTCTCGAGGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                 <  SRR4302540.2165998/94‑1 (MQ=60)

                             CAAGGCGTTAGCGATTCACGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                 <  SRR4302540.9064203/94‑1 (MQ=60)

                             CAAGGCGTTAGCAATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                 <  SRR4302540.1899870/94‑1 (MQ=60)

                              AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT                                                                >  SRR4302540.5298075/1‑94 (MQ=60)

                               AGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTG                                                               <  SRR4302540.8171982/94‑1 (MQ=60)

                                GGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGG                                                              <  SRR4302540.9248690/94‑1 (MQ=60)

                                 GCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGC                                                             >  SRR4302540.10030529/1‑94 (MQ=60)

                                  CGTTAGTGATTCTCGATGGACTGACGGAGCCTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                            <  SRR4302540.6392591/94‑1 (MQ=60)

                                  CGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                            >  SRR4302540.3715736/1‑94 (MQ=60)

                                  CGTAAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                            <  SRR4302540.2340251/94‑1 (MQ=60)

                                   GTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                           <  SRR4302540.5807112/94‑1 (MQ=60)

                                   GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGGC‑AAGCAACGCACATCGTCGATGGCCCAACACTGGCCT                                                           >  SRR4302540.228288/1‑94 (MQ=60)

                                   GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                           >  SRR4302540.8408040/1‑94 (MQ=60)

                                   GTTAGCGATTCTCGATGGACGGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                           <  SRR4302540.6452514/94‑1 (MQ=60)

                                     TAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTC                                                         >  SRR4302540.4462141/1‑94 (MQ=60)

                                      AGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                        <  SRR4302540.4205108/94‑1 (MQ=60)

                                      AGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                        <  SRR4302540.4025900/94‑1 (MQ=60)

                                      AGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                        <  SRR4302540.3795790/94‑1 (MQ=60)

                                       aaGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCT                                                       <  SRR4302540.8775492/92‑1 (MQ=60)

                                       GCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCT                                                       <  SRR4302540.5400424/94‑1 (MQ=60)

                                        CGATTCTCGATGGACTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                      <  SRR4302540.4392632/94‑1 (MQ=60)

                                        CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                      >  SRR4302540.2529145/1‑94 (MQ=60)

                                        CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                      <  SRR4302540.4807053/94‑1 (MQ=60)

                                        CGATTCTCGAGGGCCTGACGCAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                      <  SRR4302540.4392633/94‑1 (MQ=60)

                                         GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA                                                     >  SRR4302540.4285112/1‑94 (MQ=60)

                                         GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA                                                     >  SRR4302540.2104225/1‑94 (MQ=60)

                                          ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAA                                                    >  SRR4302540.190835/1‑94 (MQ=60)

                                          ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAA                                                    <  SRR4302540.8594626/94‑1 (MQ=60)

                                          ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATAGTCGATGGCCAAACACTGGCCTTCCTGAA                                                    >  SRR4302540.2130814/1‑94 (MQ=60)

                                            TCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATC                                                  <  SRR4302540.6078083/94‑1 (MQ=60)

                                             CTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCA                                                 >  SRR4302540.4326288/1‑94 (MQ=60)

                                              TCGATGGACTGAGGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                <  SRR4302540.8823578/94‑1 (MQ=60)

                                              TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                >  SRR4302540.2851555/1‑94 (MQ=60)

                                              TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                <  SRR4302540.9286122/94‑1 (MQ=60)

                                              TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                <  SRR4302540.5817520/94‑1 (MQ=60)

                                              TCGAGGGGCTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                <  SRR4302540.4057495/94‑1 (MQ=60)

                                              CCGATGGCCTGACGGGGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                <  SRR4302540.7475807/94‑1 (MQ=60)

                                               CGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATT                                               >  SRR4302540.4568157/1‑94 (MQ=60)

                                               CGATGGACTGACGGAGCGTACCCGCCGCGGCATGAACGCTACCGCC‑AAGTAACGGACATCGTCGATGGCCCAACACTTGCCTTCCTGAATCATT                                               >  SRR4302540.6563331/1‑94 (MQ=60)

                                                GATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                              <  SRR4302540.9012649/94‑1 (MQ=60)

                                                GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                              >  SRR4302540.1418980/1‑94 (MQ=60)

                                                GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                              >  SRR4302540.514470/1‑94 (MQ=60)

                                                 ATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAA                                             <  SRR4302540.1644315/94‑1 (MQ=60)

                                                 ATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGCCTTCCTGAATCATTAA                                             >  SRR4302540.6835632/1‑94 (MQ=60)

                                                 ATGAACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAA                                             <  SRR4302540.7607999/94‑1 (MQ=60)

                                                  TGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAAC                                            <  SRR4302540.8689562/94‑1 (MQ=60)

                                                   GGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACA                                           >  SRR4302540.1875049/1‑94 (MQ=60)

                                                    gcgTGACGTAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                          <  SRR4302540.6451939/91‑1 (MQ=60)

                                                    GAGTGGCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                          <  SRR4302540.6085664/94‑1 (MQ=60)

                                                    GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                          <  SRR4302540.8146158/94‑1 (MQ=60)

                                                    GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                          <  SRR4302540.8146159/94‑1 (MQ=60)

                                                    GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                          <  SRR4302540.8887067/94‑1 (MQ=60)

                                                     gctggcgggGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                         <  SRR4302540.9052611/85‑1 (MQ=60)

                                                     ACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                         <  SRR4302540.3473615/94‑1 (MQ=60)

                                                     ACTCACGGTGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGGAACGCACATCGGCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                         <  SRR4302540.3473613/94‑1 (MQ=60)

                                                     ACGGACGGAGGGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                         <  SRR4302540.2852955/94‑1 (MQ=60)

                                                      CTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                        <  SRR4302540.8986922/94‑1 (MQ=60)

                                                      CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                        >  SRR4302540.6037122/1‑94 (MQ=60)

                                                      CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                        >  SRR4302540.8185814/1‑94 (MQ=60)

                                                      CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                        >  SRR4302540.155261/1‑94 (MQ=60)

                                                       ggagggggcgccCCCGCGGTGGCATGAGCGCTACCGCC‑AAGTAACGCCGATCGGCGATGGCCCAACCCTGGCCTTCCTGAATCATTAACACTTC                                       <  SRR4302540.7672419/82‑1 (MQ=38)

                                                       TGCCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                       <  SRR4302540.7785170/94‑1 (MQ=60)

                                                       TGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                       >  SRR4302540.6655867/1‑94 (MQ=60)

                                                       GGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                       <  SRR4302540.6020368/94‑1 (MQ=60)

                                                        GACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCA                                      <  SRR4302540.2832692/94‑1 (MQ=60)

                                                         GCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAT                                     <  SRR4302540.8424644/94‑1 (MQ=60)

                                                         ACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAT                                     <  SRR4302540.9290111/94‑1 (MQ=60)

                                                          GGGAGCGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                    <  SRR4302540.746674/94‑1 (MQ=60)

                                                          CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                    <  SRR4302540.8760665/94‑1 (MQ=60)

                                                          CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                    <  SRR4302540.5415597/94‑1 (MQ=60)

                                                           GGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCC                                   <  SRR4302540.8119461/94‑1 (MQ=60)

                                                            GAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                  <  SRR4302540.8117896/94‑1 (MQ=60)

                                                            GAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                  <  SRR4302540.6494219/94‑1 (MQ=60)

                                                            GAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                  >  SRR4302540.589435/1‑94 (MQ=60)

                                                            GAGCACACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                  <  SRR4302540.2088537/94‑1 (MQ=60)

                                                             AGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG                                 <  SRR4302540.8075123/94‑1 (MQ=60)

                                                             AGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG                                 <  SRR4302540.676536/94‑1 (MQ=60)

                                                              GCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGC                                <  SRR4302540.3269416/94‑1 (MQ=60)

                                                               CGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCC                               >  SRR4302540.9025803/1‑94 (MQ=60)

                                                               CGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCC                               <  SRR4302540.4117011/94‑1 (MQ=60)

                                                                cccCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                              <  SRR4302540.3725896/91‑1 (MQ=60)

                                                                GTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                              <  SRR4302540.3725897/94‑1 (MQ=60)

                                                                GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTcaca                              >  SRR4302540.8300452/1‑90 (MQ=60)

                                                                GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                              >  SRR4302540.3875846/1‑94 (MQ=60)

                                                                 TACCCGCCGTGGCATGAACGCTACCTCC‑AAGTAACGCACATCGTCGATGGCCTAACACTGGCCTTCCTGAATCATTAACACTTCATACTGCCAA                             >  SRR4302540.7815446/1‑94 (MQ=60)

                                                                 TACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAC                             >  SRR4302540.3290173/1‑94 (MQ=60)

                                                                   CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                           >  SRR4302540.4992367/1‑94 (MQ=60)

                                                                   CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                           <  SRR4302540.45887/94‑1 (MQ=60)

                                                                   CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                           <  SRR4302540.45886/94‑1 (MQ=60)

                                                                    CCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCC                          <  SRR4302540.5248981/94‑1 (MQ=60)

                                                                    CCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCC                          >  SRR4302540.977333/1‑94 (MQ=60)

                                                                     CGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCT                         >  SRR4302540.6307537/1‑94 (MQ=60)

                                                                      GCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCGACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTG                        <  SRR4302540.8660397/94‑1 (MQ=60)

                                                                      CCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTG                        <  SRR4302540.3035909/94‑1 (MQ=60)

                                                                       CCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGG                       <  SRR4302540.9135154/94‑1 (MQ=60)

                                                                       CCGTGGCATAAACGCTACCGCC‑AAGTAACGCACATCGCCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGG                       <  SRR4302540.9135153/94‑1 (MQ=60)

                                                                        CGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGT                      <  SRR4302540.5794622/94‑1 (MQ=60)

                                                                         GTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAGCACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTC                     <  SRR4302540.5665797/94‑1 (MQ=60)

                                                                          TGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCA                    <  SRR4302540.1701125/94‑1 (MQ=60)

                                                                           GGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAC                   <  SRR4302540.7380952/94‑1 (MQ=60)

                                                                           GGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAC                   <  SRR4302540.7637375/94‑1 (MQ=60)

                                                                            GCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACC                  <  SRR4302540.5243610/94‑1 (MQ=60)

                                                                            GCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACC                  <  SRR4302540.7499442/94‑1 (MQ=60)

                                                                             CATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCC                 >  SRR4302540.1001272/1‑94 (MQ=60)

                                                                              ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                >  SRR4302540.1904946/1‑94 (MQ=60)

                                                                              ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                >  SRR4302540.8596954/1‑94 (MQ=60)

                                                                              ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                >  SRR4302540.2865217/1‑94 (MQ=60)

                                                                                 AACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT             >  SRR4302540.1043898/1‑94 (MQ=60)

                                                                                 AACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT             <  SRR4302540.6339546/94‑1 (MQ=60)

                                                                                 AACGCTACC‑CCCAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT             >  SRR4302540.1043899/1‑94 (MQ=60)

                                                                                  ACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTT            <  SRR4302540.7120435/94‑1 (MQ=60)

                                                                                  ACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTT            <  SRR4302540.10069054/94‑1 (MQ=60)

                                                                                   CGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTG           >  SRR4302540.6599809/1‑94 (MQ=60)

                                                                                   CGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTG           >  SRR4302540.4432730/1‑94 (MQ=60)

                                                                                    GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA          >  SRR4302540.2643972/1‑94 (MQ=60)

                                                                                    GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA          >  SRR4302540.2071590/1‑94 (MQ=60)

                                                                                    GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA          >  SRR4302540.4838012/1‑94 (MQ=60)

                                                                                      TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA        >  SRR4302540.2453993/1‑94 (MQ=60)

                                                                                      TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA        <  SRR4302540.9776833/94‑1 (MQ=60)

                                                                                      TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA        <  SRR4302540.3778005/94‑1 (MQ=60)

                                                                                      TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA        >  SRR4302540.6187890/1‑94 (MQ=60)

                                                                                       ACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGAT       <  SRR4302540.9421555/94‑1 (MQ=60)

                                                                                        CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC      <  SRR4302540.4402451/94‑1 (MQ=60)

                                                                                        CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC      <  SRR4302540.957521/94‑1 (MQ=60)

                                                                                        CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAGTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC      <  SRR4302540.3559310/94‑1 (MQ=60)

                                                                                         CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC     <  SRR4302540.10015958/94‑1 (MQ=60)

                                                                                         CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC     <  SRR4302540.6096660/94‑1 (MQ=60)

                                                                                          GCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCA    <  SRR4302540.1332205/94‑1 (MQ=60)

                                                                                            CCAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAC   <  SRR4302540.7575125/94‑1 (MQ=60)

                                                                                             CAAGTAGCGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG  <  SRR4302540.3988812/94‑1 (MQ=60)

                                                                                             CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG  <  SRR4302540.2010627/94‑1 (MQ=60)

                                                                                             CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG  <  SRR4302540.9872304/94‑1 (MQ=60)

CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG  >  NC_000913/903139‑903325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`