Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	903,254	A→G	V146A (GTC→GCC)	ybjP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	903,254	0	A	G	99.7%	963.9 / ‑5.5	303	V146A (GTC→GCC)	ybjP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (116/186); total (116/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01

Only 100 of 313 total aligned reads displayed.

TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGG  >  NC_000913/903163‑903343

  gATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCa                                                                                       >  1:4956783/1‑93 (MQ=255)

   aTCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCaa                                                                                      <  2:8497104/93‑1 (MQ=255)

    tCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAac                                                                                     >  1:6723628/1‑93 (MQ=255)

     cAAGGCTTTAGCGATTCACGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                                                    <  1:8958314/93‑1 (MQ=255)

     cAAGGCGTTAGCGATTCTCGAGGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                                                    <  1:2142969/93‑1 (MQ=255)

      aaGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAacac                                                                                   >  2:9497687/1‑93 (MQ=255)

      aaGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAacac                                                                                   >  2:5976259/1‑93 (MQ=255)

       aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                                                  <  1:8078231/93‑1 (MQ=255)

          cGTTAGTGATTCTCGATGGACTGACGGAGCCTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGc                                                                               <  1:6322186/93‑1 (MQ=255)

            ttAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCt                                                                             >  1:8311556/1‑93 (MQ=255)

                cGATTCTCGAGGGCCTGACGCAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCt                                                                         <  1:4345342/93‑1 (MQ=255)

                  aTTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa                                                                       >  1:4238989/1‑93 (MQ=255)

                   ttCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGaa                                                                      >  1:188957/1‑93 (MQ=255)

                    tctcGATGGACTTACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt                                                                     <  2:1511321/93‑1 (MQ=255)

                    tctcGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt                                                                     >  2:5513104/1‑93 (MQ=255)

                     ctcGATGGACTCCCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATc                                                                    <  2:697367/93‑1 (MQ=255)

                      tcGATGGACTGAGGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                                                   <  1:8722299/93‑1 (MQ=255)

                        gATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                                                 <  2:3144451/93‑1 (MQ=255)

                        gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                                                 >  1:4519212/1‑93 (MQ=255)

                        gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                                                 >  2:4621505/1‑93 (MQ=255)

                         aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                                                >  2:9465291/1‑93 (MQ=255)

                         aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                                                <  2:5301049/93‑1 (MQ=255)

                           ggacggacGGGGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAac                                                              <  2:7462136/93‑1 (MQ=255)

                            gacggacgGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                                             <  2:1042531/93‑1 (MQ=255)

                            gACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                                             >  1:1854709/1‑93 (MQ=255)

                             acggACGGAGGGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAacac                                                            <  1:2822466/90‑1 (MQ=255)

                             aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTGacac                                                            >  2:7733276/1‑93 (MQ=255)

                             aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAacac                                                            <  1:3436262/93‑1 (MQ=255)

                              cTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACt                                                           <  2:4883572/93‑1 (MQ=255)

                              cTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACt                                                           <  2:9601005/93‑1 (MQ=255)

                              cTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACt                                                           <  2:6411238/93‑1 (MQ=255)

                               tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACtt                                                          >  1:5971033/1‑93 (MQ=255)

                               tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACtt                                                          >  1:153686/1‑93 (MQ=255)

                               tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACtt                                                          >  2:1742016/1‑93 (MQ=255)

                               tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACGGGCCTTCCTGAATCATTAACACtt                                                          >  2:263713/1‑93 (MQ=255)

                                gACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTc                                                         >  2:3949281/1‑93 (MQ=255)

                                 aCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa                                                        <  1:9180007/93‑1 (MQ=255)

                                  cGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAt                                                       <  1:5356766/93‑1 (MQ=255)

                                  cGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAt                                                       <  1:8660074/93‑1 (MQ=255)

                                   ggAGCGTACCNGCCGTGGCATGAANGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc                                                      <  2:896670/93‑1 (MQ=255)

                                   ggAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc                                                      >  2:10024122/1‑93 (MQ=255)

                                   ggAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc                                                      <  1:8026125/93‑1 (MQ=255)

                                    gAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc                                                     <  2:9868958/93‑1 (MQ=255)

                                     aGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt                                                    <  2:501208/93‑1 (MQ=255)

                                       cGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGc                                                  >  2:2096149/1‑93 (MQ=255)

                                       cGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGc                                                  <  1:4073106/93‑1 (MQ=255)

                                        gtccccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc                                                 <  1:3685625/90‑1 (MQ=255)

                                        gTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCCACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc                                                 >  2:2370581/1‑93 (MQ=255)

                                        gTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc                                                 >  1:8922316/1‑93 (MQ=255)

                                         tACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa                                                >  1:3834122/1‑93 (MQ=255)

                                          aCCCGCCGTGGCATGAACGCTACCTCC‑AAGTAACGCACATCGTCGATGGCCTAACACTGGCCTTCCTGAATCATTAACACTTCATACTGCCaa                                               >  1:7725308/1‑93 (MQ=255)

                                          aCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCac                                               >  1:3254695/1‑92 (MQ=255)

                                           cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc                                              <  2:3703256/93‑1 (MQ=255)

                                            ccgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAcc                                             <  1:5192440/93‑1 (MQ=255)

                                            ccgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAcc                                             <  2:3862193/93‑1 (MQ=255)

                                             cgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAccc                                            >  1:967355/1‑93 (MQ=255)

                                              cccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                                           <  1:3002840/92‑1 (MQ=255)

                                               ccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTg                                          <  1:9026834/93‑1 (MQ=255)

                                                cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg                                         >  2:1174055/1‑93 (MQ=255)

                                                cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg                                         <  1:5731502/93‑1 (MQ=255)

                                                  tGGCATGTACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTc                                       <  2:5043828/93‑1 (MQ=255)

                                                   ggCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCa                                      <  1:7299476/93‑1 (MQ=255)

                                                   ggCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCa                                      <  1:7552705/93‑1 (MQ=255)

                                                    gCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAc                                     <  1:7416834/93‑1 (MQ=255)

                                                      aTGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAccc                                   >  1:991157/1‑93 (MQ=255)

                                                       tGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCt                                  >  1:8498208/1‑93 (MQ=255)

                                                       tGAAAGGTACCGCC‑AAGGAAGGCACATCGGCGATGGCCCGACACTGGCCTTCCTGAATCATTAACACTTCATCCAGCCAACCCTGGGCACGCt                                  >  2:7205262/1‑93 (MQ=255)

                                                            gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg                             <  2:9182478/93‑1 (MQ=255)

                                                            gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg                             <  2:8179706/93‑1 (MQ=255)

                                                            gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg                             >  1:6527321/1‑93 (MQ=255)

                                                            ccTACCGCC‑AAGTACCGCACATCGACGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg                             <  2:4049619/92‑1 (MQ=255)

                                                             cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga                            >  1:2049525/1‑93 (MQ=255)

                                                             cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga                            >  1:2615715/1‑93 (MQ=255)

                                                             cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga                            >  1:4786832/1‑93 (MQ=255)

                                                             cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga                            <  2:7388796/93‑1 (MQ=255)

                                                             cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga                            >  2:6835105/1‑93 (MQ=255)

                                                               aCCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga                          >  1:2427838/1‑93 (MQ=255)

                                                               aCCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga                          <  1:9310405/93‑1 (MQ=255)

                                                               aCCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga                          >  1:6119734/1‑93 (MQ=255)

                                                                   gccaaGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATcc                       <  1:1318483/90‑1 (MQ=255)

                                                                   cccaaGTAACGCACATCGTCGATGGCCCAACACTCGCCTTCCTGAATCATTAACCCTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATcc                       <  2:8400101/90‑1 (MQ=255)

                                                                      aaGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAcg                    >  2:9303066/1‑93 (MQ=255)

                                                                      aaGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAcg                    <  2:613293/93‑1 (MQ=255)

                                                                       aGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAcgc                   >  2:1883702/1‑93 (MQ=255)

                                                                       aGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAcgc                   <  2:8769161/93‑1 (MQ=255)

                                                                          aaCGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCa                >  2:3449672/1‑93 (MQ=255)

                                                                            cGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAAt              <  1:458434/93‑1 (MQ=255)

                                                                              cacaTCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCTTGTTTGAGATCCACGCGCAATgg            <  2:433698/93‑1 (MQ=255)

                                                                              cacaTCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATgg            <  1:6265765/93‑1 (MQ=255)

                                                                               acaTCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGa           <  2:2507481/93‑1 (MQ=255)

                                                                                caTCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGaa          >  1:1410243/1‑93 (MQ=255)

                                                                                caTCGTCGACGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGaa          >  2:6761509/1‑93 (MQ=255)

                                                                                 aTCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAAt         <  2:747085/93‑1 (MQ=255)

                                                                                  tcgtcgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATg        >  2:5118171/1‑93 (MQ=255)

                                                                                  tcgtcgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATg        >  2:256561/1‑93 (MQ=255)

                                                                                   cgtcgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGt       <  1:577661/93‑1 (MQ=255)

                                                                                    gtcgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGtt      <  1:889760/93‑1 (MQ=255)

                                                                                      cgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTAc    <  1:10013761/93‑1 (MQ=255)

                                                                                      cgATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTAc    >  2:1602386/1‑93 (MQ=255)

                                                                                        aTGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGCATGTTACgg  >  2:5417473/1‑93 (MQ=255)

TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGG  >  NC_000913/903163‑903343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGGGCAT  >  NC_000913/903160‑903347

TGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGG                                                                                               <  SRR4302540.3142938/94‑1 (MQ=60)

 GGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGC                                                                                              <  SRR4302540.2083013/94‑1 (MQ=60)

 GGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGAACATCGTCGATGGC                                                                                              >  SRR4302540.9283571/1‑94 (MQ=60)

   TTGATCAAGGCGTTAGCGATTCTCGATGGCCTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                                            <  SRR4302540.3067847/94‑1 (MQ=60)

   TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                                            >  SRR4302540.1984117/1‑94 (MQ=60)

   TTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCC                                                                                            >  SRR4302540.1515867/1‑94 (MQ=60)

    TGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCA                                                                                           >  SRR4302540.5010349/1‑94 (MQ=60)

      ATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAAC                                                                                         >  SRR4302540.6797844/1‑94 (MQ=60)

      ATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAAC                                                                                         <  SRR4302540.4765800/94‑1 (MQ=60)

        CAAGGCTTTAGCGATTCACGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                                       <  SRR4302540.9064202/94‑1 (MQ=60)

        CAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                                       <  SRR4302540.4908222/94‑1 (MQ=60)

        CAAGGCGTTAGCGATTCTCGAGGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                                       <  SRR4302540.2165998/94‑1 (MQ=60)

        CAAGGCGTTAGCGATTCACGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                                       <  SRR4302540.9064203/94‑1 (MQ=60)

        CAAGGCGTTAGCAATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACAC                                                                                       <  SRR4302540.1899870/94‑1 (MQ=60)

         AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT                                                                                      >  SRR4302540.5298075/1‑94 (MQ=60)

          AGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTG                                                                                     <  SRR4302540.8171982/94‑1 (MQ=60)

           GGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGG                                                                                    <  SRR4302540.9248690/94‑1 (MQ=60)

            GCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGC                                                                                   >  SRR4302540.10030529/1‑94 (MQ=60)

             CGTTAGTGATTCTCGATGGACTGACGGAGCCTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                                                  <  SRR4302540.6392591/94‑1 (MQ=60)

             CGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                                                  >  SRR4302540.3715736/1‑94 (MQ=60)

             CGTAAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC                                                                                  <  SRR4302540.2340251/94‑1 (MQ=60)

              GTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                                                 <  SRR4302540.5807112/94‑1 (MQ=60)

              GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGGC‑AAGCAACGCACATCGTCGATGGCCCAACACTGGCCT                                                                                 >  SRR4302540.228288/1‑94 (MQ=60)

              GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                                                 >  SRR4302540.8408040/1‑94 (MQ=60)

              GTTAGCGATTCTCGATGGACGGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT                                                                                 <  SRR4302540.6452514/94‑1 (MQ=60)

                TAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTC                                                                               >  SRR4302540.4462141/1‑94 (MQ=60)

                 AGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                                              <  SRR4302540.4205108/94‑1 (MQ=60)

                 AGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                                              <  SRR4302540.4025900/94‑1 (MQ=60)

                 AGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC                                                                              <  SRR4302540.3795790/94‑1 (MQ=60)

                  aaGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCT                                                                             <  SRR4302540.8775492/92‑1 (MQ=60)

                  GCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCT                                                                             <  SRR4302540.5400424/94‑1 (MQ=60)

                   CGATTCTCGATGGACTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                                            <  SRR4302540.4392632/94‑1 (MQ=60)

                   CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                                            >  SRR4302540.2529145/1‑94 (MQ=60)

                   CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                                            <  SRR4302540.4807053/94‑1 (MQ=60)

                   CGATTCTCGAGGGCCTGACGCAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG                                                                            <  SRR4302540.4392633/94‑1 (MQ=60)

                    GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA                                                                           >  SRR4302540.2104225/1‑94 (MQ=60)

                    GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA                                                                           >  SRR4302540.4285112/1‑94 (MQ=60)

                     ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAA                                                                          >  SRR4302540.190835/1‑94 (MQ=60)

                     ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAA                                                                          <  SRR4302540.8594626/94‑1 (MQ=60)

                     ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATAGTCGATGGCCAAACACTGGCCTTCCTGAA                                                                          >  SRR4302540.2130814/1‑94 (MQ=60)

                       TCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATC                                                                        <  SRR4302540.6078083/94‑1 (MQ=60)

                        CTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCA                                                                       >  SRR4302540.4326288/1‑94 (MQ=60)

                         TCGATGGACTGAGGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      <  SRR4302540.8823578/94‑1 (MQ=60)

                         TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      <  SRR4302540.5817520/94‑1 (MQ=60)

                         TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      >  SRR4302540.2851555/1‑94 (MQ=60)

                         TCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      <  SRR4302540.9286122/94‑1 (MQ=60)

                         TCGAGGGGCTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      <  SRR4302540.4057495/94‑1 (MQ=60)

                         CCGATGGCCTGACGGGGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAT                                                                      <  SRR4302540.7475807/94‑1 (MQ=60)

                          CGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATT                                                                     >  SRR4302540.4568157/1‑94 (MQ=60)

                          CGATGGACTGACGGAGCGTACCCGCCGCGGCATGAACGCTACCGCC‑AAGTAACGGACATCGTCGATGGCCCAACACTTGCCTTCCTGAATCATT                                                                     >  SRR4302540.6563331/1‑94 (MQ=60)

                           GATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                                                    <  SRR4302540.9012649/94‑1 (MQ=60)

                           GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                                                    >  SRR4302540.514470/1‑94 (MQ=60)

                           GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA                                                                    >  SRR4302540.1418980/1‑94 (MQ=60)

                            ATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAA                                                                   <  SRR4302540.1644315/94‑1 (MQ=60)

                            ATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGCCTTCCTGAATCATTAA                                                                   >  SRR4302540.6835632/1‑94 (MQ=60)

                            ATGAACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAA                                                                   <  SRR4302540.7607999/94‑1 (MQ=60)

                             TGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAAC                                                                  <  SRR4302540.8689562/94‑1 (MQ=60)

                              GGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACA                                                                 >  SRR4302540.1875049/1‑94 (MQ=60)

                               gcgTGACGTAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                                                <  SRR4302540.6451939/91‑1 (MQ=60)

                               GAGTGGCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                                                <  SRR4302540.6085664/94‑1 (MQ=60)

                               GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                                                <  SRR4302540.8887067/94‑1 (MQ=60)

                               GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                                                <  SRR4302540.8146159/94‑1 (MQ=60)

                               GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC                                                                <  SRR4302540.8146158/94‑1 (MQ=60)

                                gctggcgggGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                                               <  SRR4302540.9052611/85‑1 (MQ=60)

                                ACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                                               <  SRR4302540.3473615/94‑1 (MQ=60)

                                ACTCACGGTGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGGAACGCACATCGGCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                                               <  SRR4302540.3473613/94‑1 (MQ=60)

                                ACGGACGGAGGGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACT                                                               <  SRR4302540.2852955/94‑1 (MQ=60)

                                 CTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                                              <  SRR4302540.8986922/94‑1 (MQ=60)

                                 CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                                              >  SRR4302540.6037122/1‑94 (MQ=60)

                                 CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                                              >  SRR4302540.155261/1‑94 (MQ=60)

                                 CTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTT                                                              >  SRR4302540.8185814/1‑94 (MQ=60)

                                  ggagggggcgccCCCGCGGTGGCATGAGCGCTACCGCC‑AAGTAACGCCGATCGGCGATGGCCCAACCCTGGCCTTCCTGAATCATTAACACTTC                                                             <  SRR4302540.7672419/82‑1 (MQ=38)

                                  TGCCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                                             <  SRR4302540.7785170/94‑1 (MQ=60)

                                  TGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                                             >  SRR4302540.6655867/1‑94 (MQ=60)

                                  GGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTC                                                             <  SRR4302540.6020368/94‑1 (MQ=60)

                                   GACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCA                                                            <  SRR4302540.2832692/94‑1 (MQ=60)

                                    GCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAT                                                           <  SRR4302540.8424644/94‑1 (MQ=60)

                                    ACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAT                                                           <  SRR4302540.9290111/94‑1 (MQ=60)

                                     GGGAGCGTGCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                                          <  SRR4302540.746674/94‑1 (MQ=60)

                                     CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                                          <  SRR4302540.5415597/94‑1 (MQ=60)

                                     CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC                                                          <  SRR4302540.8760665/94‑1 (MQ=60)

                                      GGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCC                                                         <  SRR4302540.8119461/94‑1 (MQ=60)

                                       GAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                                        <  SRR4302540.8117896/94‑1 (MQ=60)

                                       GAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                                        <  SRR4302540.6494219/94‑1 (MQ=60)

                                       GAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                                        >  SRR4302540.589435/1‑94 (MQ=60)

                                       GAGCACACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT                                                        <  SRR4302540.2088537/94‑1 (MQ=60)

                                        AGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG                                                       <  SRR4302540.8075123/94‑1 (MQ=60)

                                        AGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG                                                       <  SRR4302540.676536/94‑1 (MQ=60)

                                         GCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGC                                                      <  SRR4302540.3269416/94‑1 (MQ=60)

                                          CGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCC                                                     >  SRR4302540.9025803/1‑94 (MQ=60)

                                          CGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCC                                                     <  SRR4302540.4117011/94‑1 (MQ=60)

                                           cccCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                                                    <  SRR4302540.3725896/91‑1 (MQ=60)

                                           GTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                                                    <  SRR4302540.3725897/94‑1 (MQ=60)

                                           GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTcaca                                                    >  SRR4302540.8300452/1‑90 (MQ=60)

                                           GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA                                                    >  SRR4302540.3875846/1‑94 (MQ=60)

                                            TACCCGCCGTGGCATGAACGCTACCTCC‑AAGTAACGCACATCGTCGATGGCCTAACACTGGCCTTCCTGAATCATTAACACTTCATACTGCCAA                                                   >  SRR4302540.7815446/1‑94 (MQ=60)

                                            TACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAC                                                   >  SRR4302540.3290173/1‑94 (MQ=60)

                                              CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                                                 >  SRR4302540.4992367/1‑94 (MQ=60)

                                              CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                                                 <  SRR4302540.45887/94‑1 (MQ=60)

                                              CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC                                                 <  SRR4302540.45886/94‑1 (MQ=60)

                                               CCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCC                                                <  SRR4302540.5248981/94‑1 (MQ=60)

                                               CCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCC                                                >  SRR4302540.977333/1‑94 (MQ=60)

                                                CGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCT                                               >  SRR4302540.6307537/1‑94 (MQ=60)

                                                 GCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCGACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTG                                              <  SRR4302540.8660397/94‑1 (MQ=60)

                                                 CCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTG                                              <  SRR4302540.3035909/94‑1 (MQ=60)

                                                  CCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGG                                             <  SRR4302540.9135154/94‑1 (MQ=60)

                                                  CCGTGGCATAAACGCTACCGCC‑AAGTAACGCACATCGCCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGG                                             <  SRR4302540.9135153/94‑1 (MQ=60)

                                                   CGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGT                                            <  SRR4302540.5794622/94‑1 (MQ=60)

                                                    GTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAGCACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTC                                           <  SRR4302540.5665797/94‑1 (MQ=60)

                                                     TGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCA                                          <  SRR4302540.1701125/94‑1 (MQ=60)

                                                      GGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAC                                         <  SRR4302540.7637375/94‑1 (MQ=60)

                                                      GGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAC                                         <  SRR4302540.7380952/94‑1 (MQ=60)

                                                       GCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACC                                        <  SRR4302540.5243610/94‑1 (MQ=60)

                                                       GCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACC                                        <  SRR4302540.7499442/94‑1 (MQ=60)

                                                        CATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCC                                       >  SRR4302540.1001272/1‑94 (MQ=60)

                                                         ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                                      >  SRR4302540.1904946/1‑94 (MQ=60)

                                                         ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                                      >  SRR4302540.8596954/1‑94 (MQ=60)

                                                         ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT                                      >  SRR4302540.2865217/1‑94 (MQ=60)

                                                            AACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT                                   <  SRR4302540.6339546/94‑1 (MQ=60)

                                                            AACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT                                   >  SRR4302540.1043898/1‑94 (MQ=60)

                                                            AACGCTACC‑CCCAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTT                                   >  SRR4302540.1043899/1‑94 (MQ=60)

                                                             ACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTT                                  <  SRR4302540.7120435/94‑1 (MQ=60)

                                                             ACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTT                                  <  SRR4302540.10069054/94‑1 (MQ=60)

                                                              CGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTG                                 >  SRR4302540.4432730/1‑94 (MQ=60)

                                                              CGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTG                                 >  SRR4302540.6599809/1‑94 (MQ=60)

                                                               GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA                                >  SRR4302540.4838012/1‑94 (MQ=60)

                                                               GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA                                >  SRR4302540.2071590/1‑94 (MQ=60)

                                                               GCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGA                                >  SRR4302540.2643972/1‑94 (MQ=60)

                                                                 TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA                              >  SRR4302540.6187890/1‑94 (MQ=60)

                                                                 TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA                              >  SRR4302540.2453993/1‑94 (MQ=60)

                                                                 TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA                              <  SRR4302540.3778005/94‑1 (MQ=60)

                                                                 TACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA                              <  SRR4302540.9776833/94‑1 (MQ=60)

                                                                  ACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGAT                             <  SRR4302540.9421555/94‑1 (MQ=60)

                                                                   CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC                            <  SRR4302540.4402451/94‑1 (MQ=60)

                                                                   CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC                            <  SRR4302540.957521/94‑1 (MQ=60)

                                                                   CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAGTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC                            <  SRR4302540.3559310/94‑1 (MQ=60)

                                                                    CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC                           <  SRR4302540.10015958/94‑1 (MQ=60)

                                                                    CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC                           <  SRR4302540.6096660/94‑1 (MQ=60)

                                                                     GCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCA                          <  SRR4302540.1332205/94‑1 (MQ=60)

                                                                       CCAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAC                         <  SRR4302540.7575125/94‑1 (MQ=60)

                                                                        CAAGTAGCGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG                        <  SRR4302540.3988812/94‑1 (MQ=60)

                                                                        CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG                        <  SRR4302540.9872304/94‑1 (MQ=60)

                                                                        CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG                        <  SRR4302540.2010627/94‑1 (MQ=60)

                                                                          AGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCG                      <  SRR4302540.779185/94‑1 (MQ=60)

                                                                            TAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCA                    <  SRR4302540.2561887/94‑1 (MQ=60)

                                                                              ACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAAT                  >  SRR4302540.5426146/1‑94 (MQ=60)

                                                                              ACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAAT                  <  SRR4302540.4172733/94‑1 (MQ=60)

                                                                               CGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATG                 <  SRR4302540.9402499/94‑1 (MQ=60)

                                                                               CGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATG                 <  SRR4302540.9402638/94‑1 (MQ=60)

                                                                               CGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATG                 <  SRR4302540.9166686/94‑1 (MQ=60)

                                                                               CGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATG                 <  SRR4302540.463325/94‑1 (MQ=60)

                                                                                GCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGG                <  SRR4302540.6209835/94‑1 (MQ=60)

                                                                                GCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGG                <  SRR4302540.1492072/94‑1 (MQ=60)

                                                                                 CACATCGTCGATGGCCCAACACTGGTCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGA               <  SRR4302540.6335472/94‑1 (MQ=60)

                                                                                 CACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGA               <  SRR4302540.6335471/94‑1 (MQ=60)

                                                                                  ACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAA              <  SRR4302540.974200/94‑1 (MQ=60)

                                                                                  ACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAA              <  SRR4302540.2381450/94‑1 (MQ=60)

                                                                                  ACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAA              >  SRR4302540.1425440/1‑94 (MQ=60)

                                                                                  ACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCACACCCTTGTCCCCCTGTTTCAGATCCAGTCGCAATGCAA              >  SRR4302540.1425439/1‑94 (MQ=60)

                                                                                   CATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAAT             >  SRR4302540.8322307/1‑94 (MQ=60)

                                                                                   CATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAAT             <  SRR4302540.2858229/94‑1 (MQ=60)

                                                                                    AGCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGCCCGAGAGCCACGCGCAATGGAATG            >  SRR4302540.9028212/1‑94 (MQ=60)

                                                                                      CGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTT          <  SRR4302540.583921/94‑1 (MQ=60)

                                                                                       GTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTA         <  SRR4302540.899216/94‑1 (MQ=60)

                                                                                       GTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTA         <  SRR4302540.899215/94‑1 (MQ=60)

                                                                                        GCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTAC        <  SRR4302540.3441670/94‑1 (MQ=60)

                                                                                         CGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACG       <  SRR4302540.10130343/94‑1 (MQ=60)

                                                                                         CGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTAGAGATCCACGCGCAATGGAATGTTACG       >  SRR4302540.5337123/1‑94 (MQ=60)

                                                                                           ATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGGG     >  SRR4302540.7332313/1‑94 (MQ=60)

                                                                                           ATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGGG     >  SRR4302540.997909/1‑94 (MQ=60)

                                                                                              GCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGGGCAT  <  SRR4302540.1156521/94‑1 (MQ=60)

TGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACGCGCAATGGAATGTTACGGGCAT  >  NC_000913/903160‑903347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`