Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
903,232 |
Δ1 bp |
coding (459/516 nt) |
ybjP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 903,232 | 0 | T | . | 100.0%
| 881.7
/ NA
| 190 | coding (459/516 nt) | ybjP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (84/106); total (84/106) |
Only 100 of 193 total aligned reads displayed.
AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA > NC_000913/903144‑903319
|
aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTa > 1:2822399/1‑93 (MQ=255)
tttACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAc > 1:5653465/1‑93 (MQ=255)
cGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcac < 1:1531945/93‑1 (MQ=255)
ggggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca > 2:3069149/1‑93 (MQ=255)
ggggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca > 1:5807656/1‑93 (MQ=255)
ggggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca > 2:5698645/1‑93 (MQ=255)
ggggATTATTGGTTGATCAATGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca > 2:941117/1‑93 (MQ=255)
gggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAt > 2:3256682/1‑93 (MQ=255)
gggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAt < 1:5683865/93‑1 (MQ=255)
gggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAt > 2:5025796/1‑93 (MQ=255)
gttttATTGTTTGATCAGGGCTTGAGCAATTCTGGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtc < 2:3450211/91‑1 (MQ=255)
gTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcg < 2:2904043/93‑1 (MQ=255)
ttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtc > 1:1220742/1‑93 (MQ=255)
ttATTGGTTGAGCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtc < 1:5446315/93‑1 (MQ=255)
aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa > 1:2350467/1‑93 (MQ=255)
aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa < 2:2778277/93‑1 (MQ=255)
aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa < 1:3863343/93‑1 (MQ=255)
ttGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAt > 2:1596858/1‑93 (MQ=255)
tGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATg > 1:5244092/1‑93 (MQ=255)
tGGTTGATAAGGGCGTTAGCGATTCTGGATGGACTGAGGGAGCTTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATg < 2:6120492/93‑1 (MQ=255)
ttGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGcc > 2:410045/1‑93 (MQ=255)
tgttCAAGGCGTTAGCGATCCTCGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGccc < 2:1297775/90‑1 (MQ=255)
aTCAAGGCTTTAGCAATTCTCGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCaa < 1:4317368/93‑1 (MQ=255)
aTCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACCTCGTCGATGGCACaa > 2:1183154/1‑93 (MQ=255)
cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca > 2:266143/1‑93 (MQ=255)
cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca > 2:2433886/1‑93 (MQ=255)
aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt > 1:3604587/1‑93 (MQ=255)
aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt > 1:1735359/1‑93 (MQ=255)
ggCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTg < 2:4053375/93‑1 (MQ=255)
ggCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTg > 2:5267937/1‑93 (MQ=255)
gtattAGCGATTCTCGATGGGCTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTgg < 1:4676426/90‑1 (MQ=255)
gTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGcc < 1:2821935/93‑1 (MQ=255)
gTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGcc > 2:1761096/1‑93 (MQ=255)
gTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGcc < 1:6101547/93‑1 (MQ=255)
ttAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCt < 1:862576/93‑1 (MQ=255)
ttAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCt > 1:3470152/1‑93 (MQ=255)
tAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCtt < 1:5068368/93‑1 (MQ=255)
aGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTc < 1:70323/93‑1 (MQ=255)
aGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTc < 2:5633330/93‑1 (MQ=255)
gCGATTCTCGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTcc < 2:627858/93‑1 (MQ=255)
gCGATCCTCGATGAACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTcc < 1:1259703/93‑1 (MQ=255)
cGATTCTCGATGGACTGACGGAGCTTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCt < 2:2382653/93‑1 (MQ=255)
cGATTCTCGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCt < 2:1952271/93‑1 (MQ=255)
gATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTg > 2:3686322/1‑93 (MQ=255)
gATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTg > 1:1153427/1‑93 (MQ=255)
aTTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa > 1:5051370/1‑93 (MQ=255)
aTTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa > 1:3105132/1‑93 (MQ=255)
ttCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCttac > 1:4002795/1‑90 (MQ=255)
tctcGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt < 1:3020732/93‑1 (MQ=255)
tctcGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt > 2:4026051/1‑93 (MQ=255)
tctcGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt > 2:2023950/1‑93 (MQ=255)
ctcGATGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATc < 1:4609446/93‑1 (MQ=255)
cgcGATGGACTGACGAAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATc < 1:5008630/91‑1 (MQ=255)
tcGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTTCTGAATCa > 2:2227837/1‑93 (MQ=255)
tcGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa < 2:1626869/93‑1 (MQ=255)
cGATGGCCGGACGGAGGGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAt < 2:1153676/93‑1 (MQ=255)
gATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt > 2:4984299/1‑93 (MQ=255)
aTGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa < 1:4178113/93‑1 (MQ=255)
tGGACTGGCGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTaa < 1:3768611/93‑1 (MQ=255)
tGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTaa < 2:135549/93‑1 (MQ=255)
tGGACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTaa < 2:4475680/93‑1 (MQ=255)
ggACTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAac < 1:5331103/93‑1 (MQ=255)
gACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca > 1:4854370/1‑93 (MQ=255)
aCTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAacac < 2:708113/93‑1 (MQ=255)
cTGACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACt < 2:4714413/93‑1 (MQ=255)
cgACGGCGCGTACCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACt < 2:4310735/92‑1 (MQ=255)
gACGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTc < 1:6030552/93‑1 (MQ=255)
gACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTc < 2:1010891/93‑1 (MQ=255)
aCGGAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa < 2:4590526/93‑1 (MQ=255)
cGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTACCGCCCATGGTCGATGCCCCATCACTGGCCTTCCTGAATCATTAACCCTTCAt < 2:4959424/93‑1 (MQ=255)
cGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCAt < 2:934421/93‑1 (MQ=255)
ggAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc > 1:2893005/1‑93 (MQ=255)
gAGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc < 1:5724448/93‑1 (MQ=255)
gAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc > 1:3218307/1‑93 (MQ=255)
aGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt < 1:2457555/93‑1 (MQ=255)
aGCGTC‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt < 1:1030436/93‑1 (MQ=255)
aGCGTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt > 1:5956618/1‑93 (MQ=255)
gTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc > 2:373042/1‑93 (MQ=255)
gTA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc < 1:4901018/93‑1 (MQ=255)
tA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa > 1:1648872/1‑93 (MQ=255)
tA‑CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa > 1:4751470/1‑93 (MQ=255)
tccccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa < 2:615624/91‑1 (MQ=255)
cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc > 1:366654/1‑93 (MQ=255)
cgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAccc < 1:2745109/93‑1 (MQ=255)
cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg > 1:1585374/1‑93 (MQ=255)
cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg < 1:120995/93‑1 (MQ=255)
gTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGt > 1:1085696/1‑93 (MQ=255)
gTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGt < 1:4413752/93‑1 (MQ=255)
ggCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCa > 1:4454137/1‑93 (MQ=255)
aTGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAccc > 2:3237770/1‑93 (MQ=255)
aTGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAccc > 2:66614/1‑93 (MQ=255)
aTGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCAccc > 1:1451733/1‑93 (MQ=255)
cGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGttt < 2:3364256/93‑1 (MQ=255)
cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga < 2:5816736/93‑1 (MQ=255)
cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga < 1:5491807/93‑1 (MQ=255)
tACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgag < 2:5917362/93‑1 (MQ=255)
tACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgag > 1:5620997/1‑93 (MQ=255)
aCCGCC‑AAGTAACGCACATCGTCGNTGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga < 2:1810061/93‑1 (MQ=255)
aCCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga < 2:3266162/93‑1 (MQ=255)
aCCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTgaga < 1:6219246/93‑1 (MQ=255)
|
AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTA‑CCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA > NC_000913/903144‑903319
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG > NC_000913/903139‑903325
|
CGGACAATTTACGGGGTTTATTGTTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCCA < SRR4302533.14614/94‑1 (MQ=60)
CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCA > SRR4302533.3324013/1‑94 (MQ=60)
ACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGT < SRR4302533.3842138/94‑1 (MQ=60)
ACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGT < SRR4302533.3119847/94‑1 (MQ=60)
CAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTA < SRR4302533.1010401/94‑1 (MQ=60)
CAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTA > SRR4302533.2839769/1‑94 (MQ=60)
CTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAC < SRR4302533.5063533/94‑1 (MQ=60)
ATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAC > SRR4302533.627590/1‑94 (MQ=60)
ATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAAC > SRR4302533.5687636/1‑94 (MQ=60)
ATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACACGCCGTGGCATGAACGCTACCGCC‑AAGTAAC > SRR4302533.4244526/1‑94 (MQ=60)
TTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACG < SRR4302533.6150602/94‑1 (MQ=60)
ACGGGGTTTATTGTTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCAC < SRR4302533.1635889/94‑1 (MQ=60)
ACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCAC < SRR4302533.3650944/94‑1 (MQ=60)
CGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACA > SRR4302533.5842726/1‑94 (MQ=60)
CGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACA < SRR4302533.1541150/94‑1 (MQ=60)
CGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACA < SRR4302533.4665919/94‑1 (MQ=60)
GGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAT < SRR4302533.4922845/94‑1 (MQ=60)
GGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAT > SRR4302533.5493109/1‑94 (MQ=60)
GGGGNTNTTTGGTTGATCAAGGCGTAAGCGATTCTCGATGGACTGACGGAGCGTTCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAT < SRR4302533.2249252/94‑1 (MQ=60)
GGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATC < SRR4302533.5718200/94‑1 (MQ=60)
GGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCG < SRR4302533.2503140/94‑1 (MQ=60)
TTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTC > SRR4302533.1228068/1‑94 (MQ=60)
TTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG > SRR4302533.5689974/1‑94 (MQ=60)
TTATTGGTTGAGCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCG < SRR4302533.5479126/94‑1 (MQ=60)
TATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGA > SRR4302533.2365008/1‑94 (MQ=60)
ATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAT < SRR4302533.3886925/94‑1 (MQ=60)
TTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATG > SRR4302533.5275611/1‑94 (MQ=60)
GGTTGATCAAGGCGTCAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGC < SRR4302533.3959243/94‑1 (MQ=60)
GGTTGAGCAAGCCGTTAGCGATTCTCGATGGACGGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGC < SRR4302533.6073575/94‑1 (MQ=60)
TGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCA < SRR4302533.3210317/94‑1 (MQ=60)
ATCAAGGCTTTAGCAATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAAC < SRR4302533.4343367/94‑1 (MQ=60)
AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT > SRR4302533.1745885/1‑94 (MQ=60)
AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT > SRR4302533.3626772/1‑94 (MQ=60)
AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT > SRR4302533.1094752/1‑94 (MQ=60)
AAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACT > SRR4302533.4605694/1‑94 (MQ=60)
gtaTTAGCGATTCTCGATGGGCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGC < SRR4302533.4704768/91‑1 (MQ=60)
CGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC < SRR4302533.138882/94‑1 (MQ=60)
CGTTAGCGATTCTCGATGGACGGAGGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCC < SRR4302533.5917636/94‑1 (MQ=60)
GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT < SRR4302533.2839303/94‑1 (MQ=60)
GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT > SRR4302533.3491573/1‑94 (MQ=60)
GTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCT < SRR4302533.6138387/94‑1 (MQ=60)
TTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTT < SRR4302533.867631/94‑1 (MQ=60)
TTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTT > SRR4302533.985192/1‑94 (MQ=60)
TGGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTC < SRR4302533.5351296/94‑1 (MQ=60)
TAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTC < SRR4302533.3567261/94‑1 (MQ=60)
TAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTC < SRR4302533.5098974/94‑1 (MQ=60)
AGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCC < SRR4302533.70779/94‑1 (MQ=60)
GCGATCCTCGATGAACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCT < SRR4302533.1267239/94‑1 (MQ=60)
CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG > SRR4302533.5387707/1‑94 (MQ=60)
CGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTG > SRR4302533.1160337/1‑94 (MQ=60)
GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA > SRR4302533.5081916/1‑94 (MQ=60)
GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA > SRR4302533.3124219/1‑94 (MQ=60)
GATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGA > SRR4302533.3734848/1‑94 (MQ=60)
ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTtac > SRR4302533.4027168/1‑91 (MQ=60)
ATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAA > SRR4302533.2147849/1‑94 (MQ=60)
TCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATC < SRR4302533.3039220/94‑1 (MQ=60)
CTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCA < SRR4302533.4637361/94‑1 (MQ=60)
CGCGATGGACTGACGAAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCA < SRR4302533.5038977/94‑1 (MQ=60)
GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA > SRR4302533.5091447/1‑94 (MQ=60)
GATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA > SRR4302533.4436174/1‑94 (MQ=60)
GAGGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTA < SRR4302533.2772284/94‑1 (MQ=60)
ATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAA < SRR4302533.4203425/94‑1 (MQ=60)
TGGACTGGCGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAAC < SRR4302533.3791719/94‑1 (MQ=60)
TGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAAC < SRR4302533.4053117/94‑1 (MQ=60)
TGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAAC < SRR4302533.4793728/94‑1 (MQ=60)
GGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACA < SRR4302533.5363057/94‑1 (MQ=60)
GGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACA > SRR4302533.4883789/1‑94 (MQ=60)
GACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACAC < SRR4302533.5255339/94‑1 (MQ=60)
GACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCA < SRR4302533.6067099/94‑1 (MQ=60)
GACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCA > SRR4302533.3030841/1‑94 (MQ=60)
CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC > SRR4302533.2910786/1‑94 (MQ=60)
CGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATC > SRR4302533.1248598/1‑94 (MQ=60)
GGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCC > SRR4302533.3238152/1‑94 (MQ=60)
gagctgcCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT < SRR4302533.4997788/87‑1 (MQ=60)
GAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT < SRR4302533.1737253/94‑1 (MQ=60)
GAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT < SRR4302533.5759010/94‑1 (MQ=60)
GAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCT > SRR4302533.5992651/1‑94 (MQ=60)
AGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG < SRR4302533.1036497/94‑1 (MQ=60)
AGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG < SRR4302533.2472720/94‑1 (MQ=60)
AGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTG > SRR4302533.731929/1‑94 (MQ=60)
GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA < SRR4302533.4930714/94‑1 (MQ=60)
GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA > SRR4302533.1658864/1‑94 (MQ=60)
GTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCA > SRR4302533.4780278/1‑94 (MQ=60)
CCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAC < SRR4302533.2400872/94‑1 (MQ=60)
ACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAC > SRR4302533.368873/1‑94 (MQ=60)
CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC > SRR4302533.3881572/1‑94 (MQ=60)
CCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACC < SRR4302533.5992668/94‑1 (MQ=60)
CCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCC > SRR4302533.4706787/1‑94 (MQ=60)
CGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCT < SRR4302533.2761937/94‑1 (MQ=60)
CGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCT < SRR4302533.3089949/94‑1 (MQ=60)
GCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTG > SRR4302533.121955/1‑94 (MQ=60)
CCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGG > SRR4302533.1594925/1‑94 (MQ=60)
CGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGT > SRR4302533.1092097/1‑94 (MQ=60)
CGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGT < SRR4302533.121760/94‑1 (MQ=60)
CGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGT > SRR4302533.2842744/1‑94 (MQ=60)
GTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTC < SRR4302533.4440404/94‑1 (MQ=60)
GTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTC < SRR4302533.1583276/94‑1 (MQ=60)
TGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCA > SRR4302533.4481068/1‑94 (MQ=60)
CATGAACGCTACCGCC‑AAGTAACGCACATCGTCGGTGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCC > SRR4302533.5540518/1‑94 (MQ=60)
CATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCC > SRR4302533.5033842/1‑94 (MQ=60)
CATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCC > SRR4302533.1460493/1‑94 (MQ=60)
ATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCT > SRR4302533.5753073/1‑94 (MQ=60)
TGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTG > SRR4302533.1483735/1‑94 (MQ=60)
CTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAG < SRR4302533.5524935/94‑1 (MQ=60)
CTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAG < SRR4302533.5789984/94‑1 (MQ=60)
CTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAG > SRR4302533.5654972/1‑94 (MQ=60)
ACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGAT < SRR4302533.3285851/94‑1 (MQ=60)
ACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGAT < SRR4302533.6256533/94‑1 (MQ=60)
ACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGAT < SRR4302533.1175129/94‑1 (MQ=60)
CCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATC < SRR4302533.698836/94‑1 (MQ=60)
CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC > SRR4302533.3259718/1‑94 (MQ=60)
CGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCC < SRR4302533.918866/94‑1 (MQ=60)
CCAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCAC < SRR4302533.4039924/94‑1 (MQ=60)
CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG < SRR4302533.1749977/94‑1 (MQ=60)
CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG < SRR4302533.4050560/94‑1 (MQ=60)
CAAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG > SRR4302533.740350/1‑94 (MQ=60)
|
CGGACAATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGATCCACG > NC_000913/903139‑903325
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
