Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
910,839 |
C→T |
A179T (GCT→ACT) |
b0872 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 910,839 | 0 | C | T | 100.0%
| 627.6
/ NA
| 172 | A179T (GCT→ACT) | b0872 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (73/99); total (73/99) |
Only 100 of 173 total aligned reads displayed.
AATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAC > NC_000913/910749‑910928
|
aaTCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGa > 1:2861669/1‑93 (MQ=255)
aTCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGAt > 1:4154730/1‑93 (MQ=255)
tCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATa < 1:6290620/93‑1 (MQ=255)
tCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATa < 1:5116629/93‑1 (MQ=255)
tCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATa > 2:5219825/1‑93 (MQ=255)
tCCATAGACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATa < 1:2260827/93‑1 (MQ=255)
ccATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATaa < 2:5309803/93‑1 (MQ=255)
cATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATaaa < 2:1828123/93‑1 (MQ=255)
tataCGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGc < 1:4842/93‑1 (MQ=255)
aCGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCtt < 2:220830/93‑1 (MQ=255)
aCGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCtt < 1:5964186/93‑1 (MQ=255)
aCGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCtt < 1:329803/93‑1 (MQ=255)
cGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTc < 1:3942086/93‑1 (MQ=255)
gAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCgg > 1:3636303/1‑93 (MQ=255)
aGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGt < 1:1779663/93‑1 (MQ=255)
gCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTa < 2:2163241/93‑1 (MQ=255)
ccGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTaa > 1:3163637/1‑93 (MQ=255)
gggCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACg > 2:1040803/1‑93 (MQ=255)
ggCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGATCAGTGATAAAGCCTTCGGTAACGt > 2:2955157/1‑93 (MQ=255)
gCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGtt > 1:4413807/1‑93 (MQ=255)
cGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAt > 2:1790577/1‑93 (MQ=255)
gCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAtt < 1:5427702/93‑1 (MQ=255)
gCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAtt < 2:5497955/93‑1 (MQ=255)
cAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAttt < 1:5137119/93‑1 (MQ=255)
cAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAttt > 1:4201000/1‑93 (MQ=255)
aGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAtttt < 1:2278532/93‑1 (MQ=255)
aGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAtttt > 2:2632536/1‑93 (MQ=255)
ggTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTc < 2:1871506/93‑1 (MQ=255)
gTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCt < 1:8258/93‑1 (MQ=255)
gTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCt > 2:2705461/1‑93 (MQ=255)
tcatcaCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTg < 2:3709229/93‑1 (MQ=255)
tcatcaCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTg < 1:5510194/93‑1 (MQ=255)
catcaCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGc < 2:334331/93‑1 (MQ=255)
catcaCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGc < 2:1131761/93‑1 (MQ=255)
tcaCGGTACGTGAAGCTAAGTCAGTTACACCTGCCAGCAGTTCGCGAGTGAGGCGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGcca < 1:5644152/93‑1 (MQ=255)
tcaCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGcca > 2:6060078/1‑93 (MQ=255)
aCGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGccacc < 1:257079/93‑1 (MQ=255)
cGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGccacca < 1:3575746/93‑1 (MQ=255)
cGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGccacca < 1:691593/93‑1 (MQ=255)
cGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGccacca < 2:930349/93‑1 (MQ=255)
ggTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAg < 1:2461325/93‑1 (MQ=255)
aCGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGt < 2:2695176/93‑1 (MQ=255)
aCGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGt < 2:6091638/93‑1 (MQ=255)
cGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGtt > 2:1357477/1‑93 (MQ=255)
tGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTAc < 2:2272154/93‑1 (MQ=255)
gAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTAcc < 2:3591698/93‑1 (MQ=255)
gAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTAcc > 1:5095031/1‑93 (MQ=255)
aaGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAATCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCg < 2:5192059/93‑1 (MQ=255)
aaGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCg > 2:649752/1‑93 (MQ=255)
aGCTGAGTAAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAACCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCgg < 1:883357/93‑1 (MQ=255)
gCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGa < 2:584441/93‑1 (MQ=255)
gCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGa < 2:3730421/93‑1 (MQ=255)
gCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGa < 2:2444558/93‑1 (MQ=255)
cTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGAt > 2:4526871/1‑93 (MQ=255)
cTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGATACCGGAt < 2:6130229/93‑1 (MQ=255)
tAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATa < 1:134820/93‑1 (MQ=255)
aaGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAg > 1:688266/1‑93 (MQ=255)
aaGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAg < 1:5924340/93‑1 (MQ=255)
gTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGtt < 1:5317986/93‑1 (MQ=255)
tCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTa < 1:5595008/93‑1 (MQ=255)
tCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTa < 1:5538223/93‑1 (MQ=255)
aGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACg < 1:1268885/93‑1 (MQ=255)
ggTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGc > 2:1449260/1‑93 (MQ=255)
gTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGcc > 1:4463539/1‑93 (MQ=255)
tACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCa < 2:2865099/93‑1 (MQ=255)
acacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCAc < 1:3209495/93‑1 (MQ=255)
acacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCAc > 1:6051638/1‑93 (MQ=255)
cacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACt > 1:4299398/1‑93 (MQ=255)
cacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACt > 1:239988/1‑93 (MQ=255)
cacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACt > 2:4897086/1‑93 (MQ=255)
cacCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACt > 2:2051837/1‑93 (MQ=255)
ccTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCa > 2:3379373/1‑93 (MQ=255)
ccTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCa < 2:4961187/93‑1 (MQ=255)
cTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCAt < 1:4892697/93‑1 (MQ=255)
cTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCAt > 2:3763282/1‑93 (MQ=255)
cagcagTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGc > 2:4507786/1‑93 (MQ=255)
cagcagTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGc < 2:428633/93‑1 (MQ=255)
agcagTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCg > 1:3773464/1‑93 (MQ=255)
gcagTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGTCGa > 2:3765528/1‑93 (MQ=255)
gcagTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGa > 1:3667715/1‑93 (MQ=255)
agTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGaaa < 2:3860819/93‑1 (MQ=255)
gTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGaaaa > 2:762344/1‑93 (MQ=255)
gTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCAGCGaaaa > 1:33673/1‑93 (MQ=255)
ttCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAAt > 1:3379227/1‑93 (MQ=255)
tCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATa < 2:6001582/93‑1 (MQ=255)
tCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATa > 1:153917/1‑93 (MQ=255)
gcgAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAAc > 1:1241894/1‑93 (MQ=255)
ccgAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAAc < 1:2894432/92‑1 (MQ=255)
cgAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACa < 1:6034736/93‑1 (MQ=255)
gAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAt < 2:712945/93‑1 (MQ=255)
aGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATc < 1:2649177/93‑1 (MQ=255)
gTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATcc < 2:1022639/93‑1 (MQ=255)
gTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATcc > 2:692004/1‑93 (MQ=255)
gagaCGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATcccg > 2:1771196/1‑91 (MQ=255)
agaCGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTgc < 2:1299518/93‑1 (MQ=255)
agaCGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTgc < 2:5465521/93‑1 (MQ=255)
gacCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTgcggcg > 1:2376492/1‑93 (MQ=255)
ccAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTa > 1:1416925/1‑93 (MQ=255)
cAGTGATAAAGCCTTTGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAc > 1:4250554/1‑93 (MQ=255)
cAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAc > 2:2948866/1‑93 (MQ=255)
|
AATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAC > NC_000913/910749‑910928
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTACGCA > NC_000913/910747‑910931
|
CCAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTG > SRR4302533.4312998/1‑94 (MQ=60)
CCAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTG < SRR4302533.5348589/94‑1 (MQ=60)
CCAAGCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTG < SRR4302533.908354/94‑1 (MQ=60)
CAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGA > SRR4302533.3518483/1‑94 (MQ=60)
CAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGA > SRR4302533.2879272/1‑94 (MQ=60)
AATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGAT > SRR4302533.4179907/1‑94 (MQ=60)
AATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGAT > SRR4302533.4234755/1‑94 (MQ=60)
TCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCCGTTCGCGAGTGAGACGACCAGTGATAA > SRR4302533.6052486/1‑94 (MQ=60)
TCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAA < SRR4302533.6328133/94‑1 (MQ=60)
TCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAA < SRR4302533.5147551/94‑1 (MQ=60)
TCCATAGACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAA < SRR4302533.2274812/94‑1 (MQ=60)
CCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAA < SRR4302533.4909245/94‑1 (MQ=60)
TATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCC < SRR4302533.4888/94‑1 (MQ=60)
ACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTC < SRR4302533.331818/94‑1 (MQ=60)
ACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTC < SRR4302533.6000272/94‑1 (MQ=60)
CGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCG < SRR4302533.3966138/94‑1 (MQ=60)
CGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCG < SRR4302533.1330361/94‑1 (MQ=60)
GGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGG > SRR4302533.3658662/1‑94 (MQ=60)
GAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGT < SRR4302533.5596548/94‑1 (MQ=60)
AGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTA < SRR4302533.3285483/94‑1 (MQ=60)
AGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTA < SRR4302533.1790498/94‑1 (MQ=60)
GCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAA > SRR4302533.3183108/1‑94 (MQ=60)
CGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACG > SRR4302533.3667173/1‑94 (MQ=60)
GGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTT > SRR4302533.4440459/1‑94 (MQ=60)
CCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTAT < SRR4302533.3220277/94‑1 (MQ=60)
CGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATT > SRR4302533.5155588/1‑94 (MQ=60)
GCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTT < SRR4302533.5460388/94‑1 (MQ=60)
GCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTT > SRR4302533.4226420/1‑94 (MQ=60)
CAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTT < SRR4302533.5168160/94‑1 (MQ=60)
AGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTC < SRR4302533.2292641/94‑1 (MQ=60)
GGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCT > SRR4302533.5451696/1‑94 (MQ=60)
GTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTG < SRR4302533.8331/94‑1 (MQ=60)
TCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGC > SRR4302533.5566179/1‑94 (MQ=60)
TCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGC < SRR4302533.5543457/94‑1 (MQ=60)
TCACGGTACGTGAAGCTAAGTCAGTTACACCTGCCAGCAGTTCGCGAGTGAGGCGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCAC < SRR4302533.5678274/94‑1 (MQ=60)
CACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAATCCTTCGGTAACGTTATTTTCTGCCACC < SRR4302533.86829/94‑1 (MQ=60)
ACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCA < SRR4302533.258645/94‑1 (MQ=60)
CGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAG < SRR4302533.695680/94‑1 (MQ=60)
CGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAG < SRR4302533.3597786/94‑1 (MQ=60)
GGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGC < SRR4302533.6300912/94‑1 (MQ=60)
GGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGC < SRR4302533.2476511/94‑1 (MQ=60)
GTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTAC > SRR4302533.965658/1‑94 (MQ=60)
TGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACC > SRR4302533.5125810/1‑94 (MQ=60)
AGCTGAGTAAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAACCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGA < SRR4302533.888545/94‑1 (MQ=60)
GCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGAT < SRR4302533.4494400/94‑1 (MQ=60)
TAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAG < SRR4302533.135676/94‑1 (MQ=60)
TAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAG > SRR4302533.692336/1‑94 (MQ=60)
TAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAG > SRR4302533.5874406/1‑94 (MQ=60)
AAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGT < SRR4302533.5960153/94‑1 (MQ=60)
GTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTA < SRR4302533.5349855/94‑1 (MQ=60)
TCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTAC < SRR4302533.5628810/94‑1 (MQ=60)
TCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTAC < SRR4302533.5571668/94‑1 (MQ=60)
AGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC < SRR4302533.1276481/94‑1 (MQ=60)
AGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGC > SRR4302533.3355338/1‑94 (MQ=60)
GGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCC > SRR4302533.4490534/1‑94 (MQ=60)
TACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCAC > SRR4302533.6088295/1‑94 (MQ=60)
ACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACT > SRR4302533.4325254/1‑94 (MQ=60)
ACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACT < SRR4302533.3229262/94‑1 (MQ=60)
ACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACT > SRR4302533.241474/1‑94 (MQ=60)
CTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATC < SRR4302533.2408503/94‑1 (MQ=60)
CTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATC < SRR4302533.4922354/94‑1 (MQ=60)
CTGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATC > SRR4302533.2750020/1‑94 (MQ=60)
TGCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCG < SRR4302533.5348963/94‑1 (MQ=60)
GCCAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGG < SRR4302533.3870465/94‑1 (MQ=60)
GCCAGCAATTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGG < SRR4302533.68908/94‑1 (MQ=60)
CAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCG > SRR4302533.3796595/1‑94 (MQ=60)
CAGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCA > SRR4302533.1710867/1‑94 (MQ=60)
AGCAGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGA > SRR4302533.3690259/1‑94 (MQ=60)
AGTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCAGCGAAAA > SRR4302533.33901/1‑94 (MQ=60)
GTTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAAT > SRR4302533.3400088/1‑94 (MQ=60)
TTCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATA > SRR4302533.154899/1‑94 (MQ=60)
TCGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAA < SRR4302533.5963345/94‑1 (MQ=60)
CGCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAAC > SRR4302533.1249314/1‑94 (MQ=60)
GCGAGTGAGACGACCAGTGATAAAGCCTTCGGTGACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACA < SRR4302533.3644259/94‑1 (MQ=60)
CCGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACA < SRR4302533.2912216/94‑1 (MQ=60)
CGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAT < SRR4302533.4354097/94‑1 (MQ=60)
CGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAT < SRR4302533.2251054/94‑1 (MQ=60)
CGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAT < SRR4302533.2577372/94‑1 (MQ=60)
CGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAT > SRR4302533.695383/1‑94 (MQ=60)
CGAGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACAT < SRR4302533.6071308/94‑1 (MQ=60)
AGTGAGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCC < SRR4302533.2665451/94‑1 (MQ=60)
AGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCG > SRR4302533.4018856/1‑94 (MQ=60)
AGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCG > SRR4302533.4981349/1‑94 (MQ=60)
AGACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCG > SRR4302533.2438972/1‑94 (MQ=60)
GACGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGG < SRR4302533.2892547/94‑1 (MQ=60)
CGACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCG > SRR4302533.2391197/1‑94 (MQ=60)
GACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGT < SRR4302533.1360804/94‑1 (MQ=60)
ACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTA > SRR4302533.1425497/1‑94 (MQ=60)
ACCAGTGATAAAGCCTTCGGTAACGTTATTTTCTACCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCCGCGTA > SRR4302533.2281647/1‑94 (MQ=60)
CCAGTGATAAAGCCTTTGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAC > SRR4302533.4276200/1‑94 (MQ=60)
CCAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTAC > SRR4302533.4276633/1‑94 (MQ=60)
CAGTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTACG > SRR4302533.3053613/1‑94 (MQ=60)
AGTGATAAAGCCTTCGGT‑ACGTTATTTTCTGCCACCAACGGTACCCGATAGTTACGCCACTTATCGGCGCAAATAACATTCTGCGGCGTtacga > SRR4302533.1536064/1‑89 (MQ=55)
GTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTACGCA > SRR4302533.1575640/1‑94 (MQ=60)
GTGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTACGCA > SRR4302533.462178/1‑94 (MQ=60)
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CCAATCCATATACGGAGCCGGGCCGCAGGTCATCACGGTACGTGAAGCTAAGTCAGGTACACCTGCCAGCAGTTCGCGAGTGAGACGACCAGCGATAAAGCCTTCGGTAACGTTATTTTCTGCCACCAGCGTTACCGGATAGTTACGCCACTCATCGGCGAAAATAACATCCTGCGGCGTACGCA > NC_000913/910747‑910931
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
