Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
920,965 |
C→T |
Q466* (CAG→TAG) |
ybjZ → |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 920,965 | 0 | C | T | 99.4%
| 672.2
/ ‑5.8
| 180 | Q466* (CAG→TAG) | ybjZ | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (79/100); total (80/100) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 185 total aligned reads displayed.
GTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTG > NC_000913/920875‑921054
|
gtgGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAg < 1:3646057/93‑1 (MQ=255)
gtgGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAg > 1:3197168/1‑93 (MQ=255)
tgGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGt < 1:646687/93‑1 (MQ=255)
gCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCg < 2:1514524/93‑1 (MQ=255)
gCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCg < 2:1561634/93‑1 (MQ=255)
gCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCg < 2:4031203/93‑1 (MQ=255)
gCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCg < 2:858840/93‑1 (MQ=255)
cGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGt < 2:2346534/93‑1 (MQ=255)
cGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGt < 1:4337267/93‑1 (MQ=255)
ggAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTg < 2:3664126/93‑1 (MQ=255)
ggAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTg > 1:5226872/1‑93 (MQ=255)
gaagaaAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCGGGGCGAGTTATGTGCTAGTCGTgg > 1:5967429/1‑93 (MQ=255)
gaagaaAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTgg > 1:1734756/1‑93 (MQ=255)
agaaAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCt < 2:4445256/93‑1 (MQ=255)
gaaAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCtt < 1:913009/93‑1 (MQ=255)
aaaaaCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTa > 1:3042078/1‑93 (MQ=255)
aaaaCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTaa > 1:1327857/1‑93 (MQ=255)
aaaaCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTaa < 2:4209410/93‑1 (MQ=255)
aaaCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAAc < 1:4727288/93‑1 (MQ=255)
aaCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACt < 2:5697943/93‑1 (MQ=255)
aCAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTc > 2:6172502/1‑93 (MQ=255)
cAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTcc < 1:1853959/93‑1 (MQ=255)
aGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCa < 1:5500347/93‑1 (MQ=255)
gTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCAt > 2:3247747/1‑93 (MQ=255)
gTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCAt > 1:5807688/1‑93 (MQ=255)
gATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTAc > 2:2866934/1‑93 (MQ=255)
gATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTAc > 1:2387504/1‑93 (MQ=255)
gATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTAc > 2:5795395/1‑93 (MQ=255)
aTGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGTGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACt > 1:5123569/1‑93 (MQ=255)
tGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTg > 2:3930665/1‑93 (MQ=255)
ttGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCa < 2:638917/93‑1 (MQ=255)
tGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAg > 1:4693793/1‑93 (MQ=255)
gTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAggg > 2:5141080/1‑93 (MQ=255)
gTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAggg < 2:5793354/93‑1 (MQ=255)
gTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAggg < 1:4915597/93‑1 (MQ=255)
cAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaa < 1:2134519/93‑1 (MQ=255)
aGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaaa < 2:3520594/93‑1 (MQ=255)
aGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaaa > 2:5222444/1‑93 (MQ=255)
aGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaaa < 2:4887051/93‑1 (MQ=255)
aGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaaa < 2:2297089/93‑1 (MQ=255)
aGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGaaa > 2:1097944/1‑93 (MQ=255)
gTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAaag < 1:1560979/93‑1 (MQ=255)
aaGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAaagaag < 2:3395641/93‑1 (MQ=255)
aaGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAaagaag < 2:3056572/93‑1 (MQ=255)
tgctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAt < 1:3028139/93‑1 (MQ=255)
tgctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAt < 2:1831218/93‑1 (MQ=255)
gctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAtt < 1:345348/93‑1 (MQ=255)
gctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTCATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAtt > 1:4447350/1‑93 (MQ=255)
ctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAttt > 1:5147067/1‑93 (MQ=255)
ctgcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAttt < 1:3910765/93‑1 (MQ=255)
gcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGa > 2:3252555/1‑93 (MQ=255)
gcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGa < 1:6186580/93‑1 (MQ=255)
gcGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGa > 2:3025155/1‑93 (MQ=255)
cGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGAc < 1:2718687/93‑1 (MQ=255)
gtgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACa > 2:379268/1‑93 (MQ=255)
gtgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACa < 2:1603715/93‑1 (MQ=255)
gtgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACa < 1:2149001/93‑1 (MQ=255)
gtgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACa > 2:1178566/1‑93 (MQ=255)
tgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAg > 2:2050779/1‑93 (MQ=255)
tgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAg < 2:5095588/93‑1 (MQ=255)
tgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAg > 2:3726945/1‑93 (MQ=255)
tgtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAg > 1:3098762/1‑93 (MQ=255)
gtCTGGCTAGCTTACAGGACAATGTCCGGGCGAGTTATGTGCTAGTCGTTGCTTAACGCCATTACTGGCAGGGTGAAAGAAGGATTTGACAgc < 1:3912926/93‑1 (MQ=255)
gtCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAgc < 1:5560978/93‑1 (MQ=255)
cTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAgcgc < 2:461251/93‑1 (MQ=255)
cTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAg < 2:3312720/93‑1 (MQ=255)
tACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAgg > 1:4075903/1‑93 (MQ=255)
tACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAgg > 1:2511058/1‑93 (MQ=255)
aCCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGc < 2:5370200/93‑1 (MQ=255)
ccTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCg < 2:5882112/93‑1 (MQ=255)
cTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCgg > 2:1643090/1‑93 (MQ=255)
cTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCgg > 1:2489840/1‑93 (MQ=255)
ttACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGa < 2:2794330/93‑1 (MQ=255)
ttACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGa > 1:785574/1‑93 (MQ=255)
ttACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGa > 2:12047/1‑93 (MQ=255)
tACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGaa < 2:3624419/93‑1 (MQ=255)
aCAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAAc < 1:1182399/93‑1 (MQ=255)
aCAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAAc < 2:1298897/93‑1 (MQ=255)
cAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTAACAGCGCCGAGGCGGAACa < 1:4187595/93‑1 (MQ=255)
aGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGCGGCGGAACAg > 2:1127334/1‑93 (MQ=255)
cACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCa < 2:2470777/93‑1 (MQ=255)
gATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACt < 2:5259088/93‑1 (MQ=255)
aTGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTc < 2:4094234/93‑1 (MQ=255)
aTGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTc > 1:5894152/1‑93 (MQ=255)
aTGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTc < 1:1432917/93‑1 (MQ=255)
tCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCAcg > 1:4559219/1‑93 (MQ=255)
gggCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGt > 2:2779432/1‑93 (MQ=255)
ggCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGtt < 2:4330681/93‑1 (MQ=255)
ggCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGtt < 2:4295442/93‑1 (MQ=255)
ggCGAGTGATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGtt > 2:5984878/1‑93 (MQ=255)
gCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGttt < 1:5270624/93‑1 (MQ=255)
cGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTa < 2:3155869/93‑1 (MQ=255)
aGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACt > 2:5274601/1‑93 (MQ=255)
aGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACt < 1:3538352/93‑1 (MQ=255)
aTGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCa < 2:4005496/93‑1 (MQ=255)
tGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCAc < 1:5660467/93‑1 (MQ=255)
gggCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACt < 1:4590535/93‑1 (MQ=255)
ggCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTg < 1:2804234/93‑1 (MQ=255)
ggCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTg > 2:5568357/1‑93 (MQ=255)
ggCTAGTCGTGGCGTAACGCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTg < 1:5830011/93‑1 (MQ=255)
|
GTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTG > NC_000913/920875‑921054
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCC > NC_000913/920872‑921058
|
GGTGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCT < SRR4302533.4649100/94‑1 (MQ=60)
TGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAG > SRR4302533.3216846/1‑94 (MQ=60)
GTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGT < SRR4302533.3668473/94‑1 (MQ=60)
TGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTC < SRR4302533.650497/94‑1 (MQ=60)
GGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCG > SRR4302533.2848643/1‑94 (MQ=60)
GCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGT < SRR4302533.1452426/94‑1 (MQ=60)
CGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTG > SRR4302533.314788/1‑94 (MQ=60)
CGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTG > SRR4302533.5258322/1‑94 (MQ=60)
CGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTG < SRR4302533.4363408/94‑1 (MQ=60)
CGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTG > SRR4302533.3691019/1‑94 (MQ=60)
GGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCGGGGCGAGTTATGTGCTAGTCGTGG > SRR4302533.6003554/1‑94 (MQ=60)
GGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGG > SRR4302533.1745281/1‑94 (MQ=60)
GAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGC > SRR4302533.4938063/1‑94 (MQ=60)
GAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTA < SRR4302533.666399/94‑1 (MQ=60)
GAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTA > SRR4302533.3060699/1‑94 (MQ=60)
GAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTA < SRR4302533.918371/94‑1 (MQ=60)
AAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAA > SRR4302533.1335825/1‑94 (MQ=60)
AAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACT < SRR4302533.4755946/94‑1 (MQ=60)
AACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTC < SRR4302533.57160/94‑1 (MQ=60)
AACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTC > SRR4302533.1810764/1‑94 (MQ=60)
CAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCA < SRR4302533.1865261/94‑1 (MQ=60)
AGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCAT < SRR4302533.5533528/94‑1 (MQ=60)
AGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCAT > SRR4302533.5842759/1‑94 (MQ=60)
AGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCAT < SRR4302533.2799316/94‑1 (MQ=60)
TCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTA < SRR4302533.3377522/94‑1 (MQ=60)
CGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTAC > SRR4302533.2402254/1‑94 (MQ=60)
GATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGTGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACT > SRR4302533.5154523/1‑94 (MQ=60)
ATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGACTAGTCGTGGCTTAACTCCATTACTG > SRR4302533.47560/1‑94 (MQ=60)
TTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAG > SRR4302533.4722237/1‑94 (MQ=60)
GTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGT < SRR4302533.4945373/94‑1 (MQ=60)
GTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGT > SRR4302533.5905150/1‑94 (MQ=60)
gaggaggAAAGTGCTGGGTGTCCGGCTAACCTAGAGCACGAGGTCCGGGGGAGGTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTG < SRR4302533.851652/87‑1 (MQ=40)
CAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAA < SRR4302533.2147681/94‑1 (MQ=60)
AGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAG < SRR4302533.4698401/94‑1 (MQ=60)
GTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGA < SRR4302533.1570380/94‑1 (MQ=60)
GTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGA > SRR4302533.4957713/1‑94 (MQ=60)
TAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAA < SRR4302533.6044327/94‑1 (MQ=60)
AAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCACTTACTGTCAGGGTGAAAGAAG > SRR4302533.2427187/1‑94 (MQ=60)
GTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGAT > SRR4302533.4402656/1‑94 (MQ=60)
TGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATT < SRR4302533.3046670/94‑1 (MQ=60)
TGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTCATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATT > SRR4302533.4474247/1‑94 (MQ=60)
GCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTT > SRR4302533.5178170/1‑94 (MQ=60)
GCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTT < SRR4302533.5205098/94‑1 (MQ=60)
GCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTT < SRR4302533.347459/94‑1 (MQ=60)
CTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTG < SRR4302533.4094734/94‑1 (MQ=60)
CTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTG < SRR4302533.3934648/94‑1 (MQ=60)
TGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGA > SRR4302533.3665104/1‑94 (MQ=60)
GCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGAC < SRR4302533.6223716/94‑1 (MQ=60)
CGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACA < SRR4302533.2735375/94‑1 (MQ=60)
CGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACA < SRR4302533.5461051/94‑1 (MQ=60)
GTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAG < SRR4302533.2162235/94‑1 (MQ=60)
GTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAG > SRR4302533.3117812/1‑94 (MQ=60)
GTCTGGCTAGCTTACAGGACAATGTCCGGGCGAGTTATGTGCTAGTCGTTGCTTAACGCCATTACTGGCAGGGTGAAAGAAGGATTTGACAGCG < SRR4302533.3936822/94‑1 (MQ=60)
GTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCG < SRR4302533.5594584/94‑1 (MQ=60)
gctgtCTACCTGACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGC < SRR4302533.6285796/89‑1 (MQ=60)
CTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGG > SRR4302533.4100714/1‑94 (MQ=60)
CTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGG < SRR4302533.3479362/94‑1 (MQ=60)
CTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGG > SRR4302533.800943/1‑94 (MQ=60)
CTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGG > SRR4302533.2526531/1‑94 (MQ=60)
ACCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCG < SRR4302533.5854863/94‑1 (MQ=60)
CCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGG > SRR4302533.3109092/1‑94 (MQ=60)
CCTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGG > SRR4302533.2505172/1‑94 (MQ=60)
CTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGA > SRR4302533.5540865/1‑94 (MQ=60)
CTTACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGA > SRR4302533.790194/1‑94 (MQ=60)
ACAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACA < SRR4302533.1189501/94‑1 (MQ=60)
CAGCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTAACAGCGCCGAGGCGGAACAG < SRR4302533.4212954/94‑1 (MQ=60)
GCACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCA < SRR4302533.1347378/94‑1 (MQ=60)
ACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAAC > SRR4302533.5165454/1‑94 (MQ=60)
ACGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAAC < SRR4302533.2664835/94‑1 (MQ=60)
CGATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACT > SRR4302533.4509754/1‑94 (MQ=60)
GATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTC < SRR4302533.2361064/94‑1 (MQ=60)
GATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTC > SRR4302533.5929751/1‑94 (MQ=60)
ATGTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCA < SRR4302533.1441574/94‑1 (MQ=60)
GTCCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACG > SRR4302533.4586870/1‑94 (MQ=60)
CCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCG > SRR4302533.1618387/1‑94 (MQ=60)
CCGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCG < SRR4302533.4179238/94‑1 (MQ=60)
CGGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGT > SRR4302533.4290070/1‑94 (MQ=60)
GGGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTT > SRR4302533.2054104/1‑94 (MQ=60)
GGCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTT < SRR4302533.2511199/94‑1 (MQ=60)
GCGAGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTA < SRR4302533.5302236/94‑1 (MQ=60)
AGTTATGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTT < SRR4302533.3560158/94‑1 (MQ=60)
TGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACT < SRR4302533.5694669/94‑1 (MQ=60)
TGGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACT > SRR4302533.5624126/1‑94 (MQ=60)
GGGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTG < SRR4302533.4618341/94‑1 (MQ=60)
GGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGC > SRR4302533.5850546/1‑94 (MQ=60)
GGCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGC < SRR4302533.2821493/94‑1 (MQ=60)
GGCTAGTCGTGGCGTAACGCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGC < SRR4302533.5865243/94‑1 (MQ=60)
GCTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCG < SRR4302533.2671389/94‑1 (MQ=60)
CTAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGC > SRR4302533.4305659/1‑94 (MQ=60)
TAGTCGTGGCTTAACTCCATTACTGTCAGGGTGGAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAAGTCACGCGTTTACTTTCACTGCGCC > SRR4302533.2174478/1‑94 (MQ=60)
TAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCC > SRR4302533.6029885/1‑94 (MQ=60)
TAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCC > SRR4302533.3063072/1‑94 (MQ=60)
TAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCC > SRR4302533.5538352/1‑94 (MQ=60)
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GGTGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCC > NC_000913/920872‑921058
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
