Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
937,294 |
A→G |
A26A (GCA→GCG) |
ycaJ → |
putative polynucleotide enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 937,294 | 0 | A | G | 100.0%
| 640.1
/ NA
| 198 | A26A (GCA→GCG) | ycaJ | putative polynucleotide enzyme |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/89); total (109/89) |
Only 100 of 202 total aligned reads displayed.
AGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTG > NC_000913/937205‑937383
|
gagGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGt > 1:792853/1‑93 (MQ=255)
agGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGta > 1:5546180/1‑93 (MQ=255)
gCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGtata < 1:1240798/93‑1 (MQ=255)
gCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGtata < 1:1646782/93‑1 (MQ=255)
cACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTatat < 2:4864307/93‑1 (MQ=255)
cACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTatat < 1:2129709/93‑1 (MQ=255)
aCCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATc > 2:1175805/1‑93 (MQ=255)
cTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCgg < 2:5821509/93‑1 (MQ=255)
tgagtgagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGc > 1:1743468/1‑93 (MQ=255)
tgagtgagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGAGCGGATGCGGCCAGAAAATTTAGCGCAGTATATCGGc > 2:2706131/1‑93 (MQ=255)
agtgagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCa > 2:3661235/1‑93 (MQ=255)
gtgagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAg < 1:2110299/93‑1 (MQ=255)
tgagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGc > 2:411541/1‑93 (MQ=255)
gagCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCa < 2:1952331/93‑1 (MQ=255)
agCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCaa > 2:5287381/1‑93 (MQ=255)
agCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCaa < 2:6203804/93‑1 (MQ=255)
gCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAAc > 2:2581431/1‑93 (MQ=255)
aaTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAt > 1:4963/1‑93 (MQ=255)
aaTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAt > 2:2499711/1‑93 (MQ=255)
aaTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAt < 1:4914400/93‑1 (MQ=255)
aaTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAt > 2:5956378/1‑93 (MQ=255)
aTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAtt > 2:5559484/1‑93 (MQ=255)
aTCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAtt > 2:2964096/1‑93 (MQ=255)
tCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAttt > 1:204988/1‑93 (MQ=255)
tCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAttt > 1:5939555/1‑93 (MQ=255)
tCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAttt < 2:1711364/93‑1 (MQ=255)
tGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgc < 1:1691432/93‑1 (MQ=255)
tGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgc < 2:3444065/93‑1 (MQ=255)
tGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgc < 2:3028437/93‑1 (MQ=255)
gTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgct < 2:5161669/93‑1 (MQ=255)
tCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgctg > 2:186604/1‑93 (MQ=255)
tCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTgctg < 2:4781407/93‑1 (MQ=255)
gCTCGCTTTTTCCGATAATACTTTTCAACCTCTTGCCGCGCGTATGCGGCCAGAAAATTTAGCGCATTATATCGGCCAGCAACATTTgctggc < 1:4099654/93‑1 (MQ=255)
cGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGc > 2:3285200/1‑93 (MQ=255)
gATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCg > 1:1228898/1‑93 (MQ=255)
aTTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCgg < 1:3107024/93‑1 (MQ=255)
aTTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCgg < 1:901932/93‑1 (MQ=255)
ttCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGaa < 1:2418177/93‑1 (MQ=255)
cGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc < 2:3923100/93‑1 (MQ=255)
cGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc < 2:2378842/93‑1 (MQ=255)
cGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 2:2488883/1‑93 (MQ=255)
ggATAATACTTTTCAACCTCTGGCCGCGCGTCTGCGGCCAGAAAATTTAGCGCAGCATATCGGCCAGCAACATTTGCTGGCTGCGGGGGAGcc > 2:6092650/1‑93 (MQ=255)
ggATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGcc < 1:2806736/93‑1 (MQ=255)
ggATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGcc > 2:1061621/1‑93 (MQ=255)
ataatcCTTTTCAACCTCTGGCCGCGCGTATGCGACCAGAAAATTAAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGt < 2:4677081/93‑1 (MQ=255)
taataCTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGtt > 2:2674487/1‑93 (MQ=255)
taataCTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGtt > 2:2225804/1‑93 (MQ=255)
aataCTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTg < 2:1726559/93‑1 (MQ=255)
ataCTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGc > 2:3859594/1‑93 (MQ=255)
aCTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGGCGTTGCcg > 2:3152881/1‑93 (MQ=255)
ttttCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCcgcg > 1:557090/1‑93 (MQ=255)
tCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCgcgcgc < 1:3365696/93‑1 (MQ=255)
tCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCgcgcgc < 2:4273445/93‑1 (MQ=255)
cAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCt > 2:4983105/1‑93 (MQ=255)
aaCCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTa > 2:4383705/1‑93 (MQ=255)
aCCTCTGGCCGCGCGTATTCGGCCAGAAAATTTAGCGCAGTATATCAGCCAGCAACATTTGTTGGCTGCGGGGTAGGCGTTGGCTTGCGCTAt > 2:1355145/1‑93 (MQ=255)
ccTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATc < 2:1559154/93‑1 (MQ=255)
ccTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATc < 2:371304/93‑1 (MQ=255)
ccTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATc > 1:3264491/1‑93 (MQ=255)
ctctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCg > 1:2871248/1‑93 (MQ=255)
ctctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGCCTGCGGGGAAGCCGTTGCCGCGCGCTATCg > 1:2614307/1‑93 (MQ=255)
tctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGGAGCCGTTGCCGCGCGCTATCGa > 2:5757227/1‑93 (MQ=255)
tctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGTCGCGCGCTATCGa > 2:2555853/1‑93 (MQ=255)
tctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGa > 1:2844435/1‑93 (MQ=255)
tctGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGa > 2:5245688/1‑93 (MQ=255)
tGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAg > 1:6141380/1‑93 (MQ=255)
ggCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGc < 1:5752467/93‑1 (MQ=255)
gCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGcc > 2:4065777/1‑93 (MQ=255)
ccGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTTTCGAAGCCg > 2:5623350/1‑93 (MQ=255)
ccGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCg < 1:5442773/93‑1 (MQ=255)
ccGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCg < 1:5100657/93‑1 (MQ=255)
ccGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCg < 2:769719/93‑1 (MQ=255)
cgcgcgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCgg > 1:6158716/1‑93 (MQ=255)
cgcgcgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCgg < 2:3595121/93‑1 (MQ=255)
cgcgcgTATGCGGCCAGAAAATTAAGCGCAGTATATCGGCCAGCAACATTTGCTGGCGGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCgg < 1:161503/93‑1 (MQ=255)
gcgcgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCggg > 1:5352822/1‑93 (MQ=255)
cgcgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCCCGCGCTATCGAAGCCGGGc > 1:1537047/1‑93 (MQ=255)
cgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCAt < 2:2082194/93‑1 (MQ=255)
cgTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCAt < 2:2271461/93‑1 (MQ=255)
aTGCGCCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTa < 2:2455806/93‑1 (MQ=255)
tGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTAc > 1:300285/1‑93 (MQ=255)
tGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTAc > 2:4993633/1‑93 (MQ=255)
cAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTa < 2:1530697/93‑1 (MQ=255)
cAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTa > 2:4727753/1‑93 (MQ=255)
aGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTAt > 1:2356571/1‑93 (MQ=255)
gAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATg > 1:1065676/1‑93 (MQ=255)
gAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATg > 1:1776461/1‑93 (MQ=255)
aaaaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGa < 1:3852415/93‑1 (MQ=255)
aaaaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGa < 1:2961139/93‑1 (MQ=255)
aaaaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGa < 2:3381866/93‑1 (MQ=255)
aaaaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGa < 1:5665388/93‑1 (MQ=255)
aaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATc < 1:3676413/93‑1 (MQ=255)
aaTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATc < 1:1604647/93‑1 (MQ=255)
aTTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATcc > 1:4616253/1‑93 (MQ=255)
aTTTAGCGCAGTATATCGGCCAGCAACATTGGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATcc < 1:5489992/93‑1 (MQ=255)
tttAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCct > 2:1119892/1‑93 (MQ=255)
tttAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCct > 1:6209151/1‑93 (MQ=255)
tttAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCct < 1:2698104/93‑1 (MQ=255)
ttAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCctc < 1:5218687/93‑1 (MQ=255)
aGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTg < 1:415871/93‑1 (MQ=255)
|
AGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTG > NC_000913/937205‑937383
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGG > NC_000913/937201‑937387
|
AAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCG < SRR4302533.4540380/94‑1 (MQ=60)
AAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCG > SRR4302533.5103202/1‑94 (MQ=60)
AGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGT > SRR4302533.797519/1‑94 (MQ=60)
GAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTA > SRR4302533.5579677/1‑94 (MQ=60)
GGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATA > SRR4302533.783108/1‑94 (MQ=60)
GCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATAT < SRR4302533.1656755/94‑1 (MQ=60)
GCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATAT < SRR4302533.1248211/94‑1 (MQ=60)
CACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATC < SRR4302533.2142843/94‑1 (MQ=60)
CTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGC > SRR4302533.1754068/1‑94 (MQ=60)
TGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCC > SRR4302533.1785389/1‑94 (MQ=60)
GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGC < SRR4302533.2123314/94‑1 (MQ=60)
GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGC < SRR4302533.3334129/94‑1 (MQ=60)
TGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCA < SRR4302533.569080/94‑1 (MQ=60)
CAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAT < SRR4302533.5783750/94‑1 (MQ=60)
CAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAT > SRR4302533.209590/1‑94 (MQ=60)
CAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACAT > SRR4302533.5010/1‑94 (MQ=60)
AATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATT < SRR4302533.4944168/94‑1 (MQ=60)
ATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTT > SRR4302533.206291/1‑94 (MQ=60)
ATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTT > SRR4302533.5975468/1‑94 (MQ=60)
TGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCT < SRR4302533.1701677/94‑1 (MQ=60)
TGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCT > SRR4302533.4109509/1‑94 (MQ=60)
TGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCT < SRR4302533.587961/94‑1 (MQ=60)
TCGCTCTATTTTTCGGATAATGCGTTTCAACCTCTGGCCGCGCGTATTCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGG < SRR4302533.5223595/94‑1 (MQ=60)
CGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGC < SRR4302533.2849472/94‑1 (MQ=60)
GCTCGCTTTTTCCGATAATACTTTTCAACCTCTTGCCGCGCGTATGCGGCCAGAAAATTTAGCGCATTATATCGGCCAGCAACATTTGCTGGCT < SRR4302533.4124605/94‑1 (MQ=60)
GCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCT > SRR4302533.61897/1‑94 (MQ=60)
GCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCT < SRR4302533.4779250/94‑1 (MQ=60)
CGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCG < SRR4302533.1707794/94‑1 (MQ=60)
CGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCG > SRR4302533.1236255/1‑94 (MQ=60)
ATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGG > SRR4302533.3723540/1‑94 (MQ=60)
ATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGG < SRR4302533.3126120/94‑1 (MQ=60)
ATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGG < SRR4302533.907221/94‑1 (MQ=60)
TTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAG < SRR4302533.2433111/94‑1 (MQ=60)
CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCC > SRR4302533.1838971/1‑94 (MQ=60)
CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCC > SRR4302533.2876669/1‑94 (MQ=60)
GGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCG > SRR4302533.2665801/1‑94 (MQ=60)
GGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCG < SRR4302533.2824007/94‑1 (MQ=60)
GGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCG > SRR4302533.160948/1‑94 (MQ=60)
TAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTG < SRR4302533.5502141/94‑1 (MQ=60)
AATACTTTTCAACCTCTGGCCGCGCGTATCCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTTGCTGCGGGGAAGCCGTTGC > SRR4302533.2905293/1‑94 (MQ=60)
ATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCC > SRR4302533.3006979/1‑94 (MQ=60)
CTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCG > SRR4302533.560396/1‑94 (MQ=60)
CTTGTCAACCGCTGGCCGCGCGTAGGCGGCAAGAAAATTTAGCTCAGTGTATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCG < SRR4302533.2296141/94‑1 (MQ=60)
TTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGC > SRR4302533.5049337/1‑94 (MQ=60)
TCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCT < SRR4302533.3386486/94‑1 (MQ=60)
CAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTA < SRR4302533.4956657/94‑1 (MQ=60)
CAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTA > SRR4302533.1207510/1‑94 (MQ=60)
CAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTA > SRR4302533.1699174/1‑94 (MQ=60)
CAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTA > SRR4302533.2432442/1‑94 (MQ=60)
AACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTAT > SRR4302533.3124791/1‑94 (MQ=60)
ACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATC > SRR4302533.3284628/1‑94 (MQ=60)
ACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATC < SRR4302533.4143434/94‑1 (MQ=60)
CCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCG > SRR4302533.2888914/1‑94 (MQ=60)
CCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGCCTGCGGGGAAGCCGTTGCCGCGCGCTATCG > SRR4302533.2630354/1‑94 (MQ=60)
CTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGA > SRR4302533.2861939/1‑94 (MQ=60)
TCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAA < SRR4302533.2133314/94‑1 (MQ=60)
CTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAG > SRR4302533.94857/1‑94 (MQ=60)
CTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAG > SRR4302533.1643873/1‑94 (MQ=60)
CTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAG > SRR4302533.6178368/1‑94 (MQ=60)
CTGGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAG > SRR4302533.2587097/1‑94 (MQ=60)
GGCCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCC < SRR4302533.5787174/94‑1 (MQ=60)
CCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGG > SRR4302533.5572955/1‑94 (MQ=60)
CCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGG > SRR4302533.6195758/1‑94 (MQ=60)
CCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGG < SRR4302533.5475561/94‑1 (MQ=60)
CCGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGG < SRR4302533.5131468/94‑1 (MQ=60)
CGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGG > SRR4302533.4401601/1‑94 (MQ=60)
CGCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGG > SRR4302533.5384948/1‑94 (MQ=60)
CGCGCGTATGCGGCCAGAAAATTAAGCGCAGTATATCGGCCAGCAACATTTGCTGGCGGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGG < SRR4302533.162532/94‑1 (MQ=60)
GCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGC < SRR4302533.1242146/94‑1 (MQ=60)
GCGCGTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCCCGCGCTATCGAAGCCGGGC > SRR4302533.1546281/1‑94 (MQ=60)
GTATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTT > SRR4302533.3681310/1‑94 (MQ=60)
TATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTA < SRR4302533.2739110/94‑1 (MQ=60)
ATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTAC > SRR4302533.6215415/1‑94 (MQ=60)
ATGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTAC > SRR4302533.302123/1‑94 (MQ=60)
TGCGGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACA < SRR4302533.827934/94‑1 (MQ=60)
GGCCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTC > SRR4302533.1624750/1‑94 (MQ=60)
CCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTA > SRR4302533.2254521/1‑94 (MQ=60)
CCAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTA > SRR4302533.6122039/1‑94 (MQ=60)
CAGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTAT > SRR4302533.2371140/1‑94 (MQ=60)
AGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATG > SRR4302533.1071935/1‑94 (MQ=60)
AGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATG < SRR4302533.5448926/94‑1 (MQ=60)
AGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATG > SRR4302533.1787275/1‑94 (MQ=60)
AGAAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATG < SRR4302533.1415961/94‑1 (MQ=60)
AAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGAT < SRR4302533.2979241/94‑1 (MQ=60)
AAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGAT < SRR4302533.3875941/94‑1 (MQ=60)
AAAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGAT < SRR4302533.5699616/94‑1 (MQ=60)
AAATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATC < SRR4302533.5347065/94‑1 (MQ=60)
AATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCC < SRR4302533.56078/94‑1 (MQ=60)
AATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCC < SRR4302533.1614360/94‑1 (MQ=60)
AATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCC > SRR4302533.4644207/1‑94 (MQ=60)
AATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCC < SRR4302533.3699009/94‑1 (MQ=60)
ATTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCT > SRR4302533.6246391/1‑94 (MQ=60)
ATTTAGCGCAGTATATCGGCCAGCAACATTGGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCT < SRR4302533.5523088/94‑1 (MQ=60)
TTTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTC < SRR4302533.2714637/94‑1 (MQ=60)
TTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCT < SRR4302533.5250098/94‑1 (MQ=60)
TTAGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCT < SRR4302533.3192690/94‑1 (MQ=60)
AGCGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGG < SRR4302533.418369/94‑1 (MQ=60)
CGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGG > SRR4302533.4878730/1‑94 (MQ=60)
CGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGG > SRR4302533.1370693/1‑94 (MQ=60)
CGCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGG < SRR4302533.4146028/94‑1 (MQ=60)
GCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGG < SRR4302533.3155469/94‑1 (MQ=60)
GCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGG > SRR4302533.531715/1‑94 (MQ=60)
GCAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGG < SRR4302533.6130916/94‑1 (MQ=60)
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AAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGG > NC_000913/937201‑937387
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
