Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
979,847 |
A→G |
A1433A (GCA→GCG) |
mukB → |
MukB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 979,847 | 0 | A | G | 100.0%
| 668.4
/ NA
| 208 | A1433A (GCA→GCG) | mukB | MukB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/91); total (117/91) |
Only 100 of 217 total aligned reads displayed.
GTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGG > NC_000913/979757‑979936
|
tttCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGgc < 1:4034362/92‑1 (MQ=255)
gTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGgc > 2:4725598/1‑93 (MQ=255)
ttCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCgcggcg > 1:1300331/1‑93 (MQ=255)
ttCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCgcggcg > 2:231137/1‑93 (MQ=255)
ccTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGcc < 2:3172094/93‑1 (MQ=255)
ccTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGcc > 2:486493/1‑93 (MQ=255)
ccTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGcc < 1:2345738/93‑1 (MQ=255)
tCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCgg > 2:2506373/1‑93 (MQ=255)
cGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGa > 1:1549587/1‑93 (MQ=255)
gATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGATTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGaa > 1:4445534/1‑93 (MQ=255)
aTGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCCCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGaaa > 1:1769114/1‑93 (MQ=255)
tGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGaaaa > 2:5094395/1‑93 (MQ=255)
gAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAat < 1:3704353/93‑1 (MQ=255)
gAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAat > 1:4875336/1‑93 (MQ=255)
gAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAat < 2:576389/93‑1 (MQ=255)
agcagcGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAatat < 1:6023094/93‑1 (MQ=255)
gcagcGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATc < 1:4583090/93‑1 (MQ=255)
gcgcGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGc > 2:2805606/1‑93 (MQ=255)
gcgcGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGc < 2:4342498/93‑1 (MQ=255)
cgcgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGcc < 1:5514935/93‑1 (MQ=255)
gcgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGccc < 2:181759/93‑1 (MQ=255)
gcgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGccc < 2:1666862/93‑1 (MQ=255)
cgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCg > 2:1123359/1‑93 (MQ=255)
cgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCg < 2:1566840/93‑1 (MQ=255)
cgACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCg < 2:4527321/93‑1 (MQ=255)
aCTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCAGGAAAATATCAGCCCGga > 2:4111369/1‑93 (MQ=255)
tGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGgaga > 2:513694/1‑93 (MQ=255)
tGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGAGCCGGAAAATATCAGCCCGgaga > 2:3031310/1‑93 (MQ=255)
ggATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGaa < 1:5759233/93‑1 (MQ=255)
tGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAgg > 1:671654/1‑93 (MQ=255)
gCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGc > 1:3177670/1‑93 (MQ=255)
cTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGca > 1:290278/1‑93 (MQ=255)
cTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGca < 1:1708803/93‑1 (MQ=255)
tCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGcac > 1:5351464/1‑93 (MQ=255)
ttCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGcaccac < 2:2931535/93‑1 (MQ=255)
tCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCaccacc > 2:2280739/1‑93 (MQ=255)
tCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCaccacc > 2:3933784/1‑93 (MQ=255)
tATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCta < 1:1844738/93‑1 (MQ=255)
tATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCta > 2:1141857/1‑93 (MQ=255)
tATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCta > 2:2251226/1‑93 (MQ=255)
tATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCta > 2:5332634/1‑93 (MQ=255)
aTCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCtat > 2:1907101/1‑93 (MQ=255)
tCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCtata < 1:951591/93‑1 (MQ=255)
cGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATaa < 2:1233994/93‑1 (MQ=255)
ccACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAAc < 1:2409858/93‑1 (MQ=255)
cACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACt > 1:6191425/1‑93 (MQ=255)
cACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACt > 2:4399405/1‑93 (MQ=255)
cACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACt > 2:3618870/1‑93 (MQ=255)
aCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTg > 2:4796779/1‑93 (MQ=255)
aCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTg < 1:3473318/93‑1 (MQ=255)
aCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTg > 1:2235361/1‑93 (MQ=255)
aCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTg > 2:6257488/1‑93 (MQ=255)
cGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTgg > 2:5319723/1‑93 (MQ=255)
cTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTg > 1:826990/1‑93 (MQ=255)
tGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGc > 1:1607018/1‑93 (MQ=255)
tGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGc > 2:3498820/1‑93 (MQ=255)
tttGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGt > 1:5264666/1‑93 (MQ=255)
tGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTaa < 2:3265003/93‑1 (MQ=255)
tGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTaa > 2:3698549/1‑93 (MQ=255)
gAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTaaa > 1:3726089/1‑93 (MQ=255)
gAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTaaa > 1:1039745/1‑93 (MQ=255)
aaTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAg < 2:4548959/93‑1 (MQ=255)
aaTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAg < 2:5752048/93‑1 (MQ=255)
aaTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGAACCACCTATAAACTGGTGCGTAAAg > 2:1067676/1‑93 (MQ=255)
aTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGt < 1:378279/93‑1 (MQ=255)
aTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGt > 2:3784773/1‑93 (MQ=255)
aTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGt < 2:5442224/93‑1 (MQ=255)
aTTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGt < 2:5458632/93‑1 (MQ=255)
tgtgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCt > 2:2165191/1‑93 (MQ=255)
tgtgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCt > 1:2111828/1‑93 (MQ=255)
tgtgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCt > 1:2085191/1‑93 (MQ=255)
tgtgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCt < 1:1411070/93‑1 (MQ=255)
tgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTc > 1:1171633/1‑93 (MQ=255)
tgtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTc > 1:3397148/1‑93 (MQ=255)
gtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTcc > 2:667888/1‑93 (MQ=255)
gtgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTcc > 2:2389111/1‑93 (MQ=255)
tgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCa > 1:5705462/1‑93 (MQ=255)
tgAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCa < 1:1860926/93‑1 (MQ=255)
gAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAg > 2:4239374/1‑93 (MQ=255)
gCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGaa < 1:6100044/93‑1 (MQ=255)
gCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGaa < 2:6128476/93‑1 (MQ=255)
cGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAAt < 1:2786498/93‑1 (MQ=255)
gTTTGCAAATGCAACTCATCATCGCGTCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATa < 2:1985854/93‑1 (MQ=255)
gTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATa < 2:4939992/93‑1 (MQ=255)
ttGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATAcc < 2:3982601/93‑1 (MQ=255)
tGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCg > 1:974764/1‑93 (MQ=255)
tGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCg > 1:789719/1‑93 (MQ=255)
gCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGa > 1:5021581/1‑93 (MQ=255)
aaTGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAaca > 1:2177268/1‑93 (MQ=255)
aaTGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAaca < 2:852018/93‑1 (MQ=255)
aaTGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAaca > 1:3675030/1‑93 (MQ=255)
aaTGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAaca < 2:2460007/93‑1 (MQ=255)
tGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACg < 1:1649365/93‑1 (MQ=255)
tGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACg > 1:1437499/1‑93 (MQ=255)
gCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGt < 1:2667835/93‑1 (MQ=255)
aaCTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTc > 1:4150045/1‑93 (MQ=255)
tcatcaTCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATg < 2:3340287/93‑1 (MQ=255)
atcatcGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATgtc > 1:4103066/1‑93 (MQ=255)
atcatcGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATgtc < 2:609016/93‑1 (MQ=255)
atcGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATgtcgtc < 1:3876451/93‑1 (MQ=255)
|
GTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGG > NC_000913/979757‑979936
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTG > NC_000913/979754‑979940
|
TCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCG < SRR4302533.3909114/94‑1 (MQ=60)
GCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCG < SRR4302533.3017828/94‑1 (MQ=60)
CTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGG > SRR4302533.4324692/1‑94 (MQ=60)
TGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGC < SRR4302533.5740785/94‑1 (MQ=60)
TTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCG < SRR4302533.4058919/94‑1 (MQ=60)
GTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCG > SRR4302533.5731206/1‑94 (MQ=60)
GTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCG > SRR4302533.1308153/1‑94 (MQ=60)
TTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGC > SRR4302533.3743933/1‑94 (MQ=60)
TTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGC < SRR4302533.5427932/94‑1 (MQ=60)
CCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCG > SRR4302533.2467924/1‑94 (MQ=60)
CCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCG < SRR4302533.2360257/94‑1 (MQ=60)
CTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGG > SRR4302533.4083645/1‑94 (MQ=60)
TCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGA > SRR4302533.1558926/1‑94 (MQ=60)
CGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAA > SRR4302533.96989/1‑94 (MQ=60)
CGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGATTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAA > SRR4302533.4472424/1‑94 (MQ=60)
GATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCCCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAA > SRR4302533.1779886/1‑94 (MQ=60)
GATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAA > SRR4302533.4326896/1‑94 (MQ=60)
TGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAAT > SRR4302533.4904874/1‑94 (MQ=60)
GAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATA < SRR4302533.3727106/94‑1 (MQ=60)
GAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATA < SRR4302533.1986598/94‑1 (MQ=60)
AAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATAT < SRR4302533.3713079/94‑1 (MQ=60)
AGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATC < SRR4302533.5023358/94‑1 (MQ=60)
AGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATC < SRR4302533.6059594/94‑1 (MQ=60)
GCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCA < SRR4302533.4610857/94‑1 (MQ=60)
GCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCA < SRR4302533.2770975/94‑1 (MQ=60)
CAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAG < SRR4302533.577101/94‑1 (MQ=60)
CGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCC < SRR4302533.5548231/94‑1 (MQ=60)
GCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCG < SRR4302533.3880053/94‑1 (MQ=60)
GCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCG < SRR4302533.4595438/94‑1 (MQ=60)
ACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAG < SRR4302533.826383/94‑1 (MQ=60)
ACTGGATGCTCGTTCTATCGCCACGATGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAG < SRR4302533.1868664/94‑1 (MQ=60)
GGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAA < SRR4302533.5793986/94‑1 (MQ=60)
GGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAA < SRR4302533.14409/94‑1 (MQ=60)
ATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGG > SRR4302533.675620/1‑94 (MQ=60)
TGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGC > SRR4302533.3197214/1‑94 (MQ=60)
TGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGC > SRR4302533.5855260/1‑94 (MQ=60)
GCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCA > SRR4302533.292044/1‑94 (MQ=60)
CTCGTTCTATCGCCGCGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCAC < SRR4302533.1576910/94‑1 (MQ=60)
CTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCAC < SRR4302533.1719156/94‑1 (MQ=60)
CTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCAC > SRR4302533.5383575/1‑94 (MQ=60)
GTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCAC > SRR4302533.4129033/1‑94 (MQ=60)
TCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCT > SRR4302533.3783348/1‑94 (MQ=60)
TCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCT < SRR4302533.525465/94‑1 (MQ=60)
CTGTCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATGTCAGCCCGGAGAAAGGCACCACCTA > SRR4302533.6124761/1‑94 (MQ=60)
TATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTAT < SRR4302533.1855987/94‑1 (MQ=60)
ATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATA < SRR4302533.1790165/94‑1 (MQ=60)
TCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAA < SRR4302533.957181/94‑1 (MQ=60)
CGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAA > SRR4302533.4817783/1‑94 (MQ=60)
CCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACT < SRR4302533.2424741/94‑1 (MQ=60)
CCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACT > SRR4302533.1626618/1‑94 (MQ=60)
CCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACT > SRR4302533.6228582/1‑94 (MQ=60)
CCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACT > SRR4302533.2874746/1‑94 (MQ=60)
CACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTG > SRR4302533.2249154/1‑94 (MQ=60)
CACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTG > SRR4302533.3944612/1‑94 (MQ=60)
CACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTG > SRR4302533.142658/1‑94 (MQ=60)
ACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGG < SRR4302533.3494750/94‑1 (MQ=60)
CGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGT > SRR4302533.5369351/1‑94 (MQ=60)
GCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTG > SRR4302533.831842/1‑94 (MQ=60)
GCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTG < SRR4302533.346302/94‑1 (MQ=60)
CTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGC > SRR4302533.1616770/1‑94 (MQ=60)
GTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGT > SRR4302533.5296263/1‑94 (MQ=60)
TGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAA > SRR4302533.975046/1‑94 (MQ=60)
TGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAA > SRR4302533.3748948/1‑94 (MQ=60)
TGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAA > SRR4302533.1045856/1‑94 (MQ=60)
GAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAG > SRR4302533.2065469/1‑94 (MQ=60)
ATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTC < SRR4302533.380554/94‑1 (MQ=60)
ATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTC > SRR4302533.1708341/1‑94 (MQ=60)
TTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCT > SRR4302533.2098029/1‑94 (MQ=60)
TTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCT > SRR4302533.2124855/1‑94 (MQ=60)
TTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCT < SRR4302533.2419736/94‑1 (MQ=60)
TGTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTT < SRR4302533.1419600/94‑1 (MQ=60)
GTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTC > SRR4302533.1178666/1‑94 (MQ=60)
GTGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTC > SRR4302533.3418126/1‑94 (MQ=60)
TGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCC < SRR4302533.1112258/94‑1 (MQ=60)
TGTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCC < SRR4302533.2221821/94‑1 (MQ=60)
GTGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCA > SRR4302533.5739923/1‑94 (MQ=60)
TGAGCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAG < SRR4302533.1872273/94‑1 (MQ=60)
GCGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAAT < SRR4302533.6136881/94‑1 (MQ=60)
CGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATA < SRR4302533.93912/94‑1 (MQ=60)
CGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATA > SRR4302533.6154550/1‑94 (MQ=60)
CGTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATA < SRR4302533.2803621/94‑1 (MQ=60)
GTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATAC < SRR4302533.1575528/94‑1 (MQ=60)
GTTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATAC > SRR4302533.724079/1‑94 (MQ=60)
TTTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACC > SRR4302533.2109495/1‑94 (MQ=60)
TTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCG > SRR4302533.980485/1‑94 (MQ=60)
TTGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCG > SRR4302533.794366/1‑94 (MQ=60)
TGCAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGA > SRR4302533.5051994/1‑94 (MQ=60)
CAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAAC > SRR4302533.5242999/1‑94 (MQ=60)
CAAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAAC < SRR4302533.232568/94‑1 (MQ=60)
AAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACA > SRR4302533.2190688/1‑94 (MQ=60)
AAATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACA > SRR4302533.3697615/1‑94 (MQ=60)
ATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAACGTCTTCCAGAGTACCGAGCACG > SRR4302533.1293645/1‑94 (MQ=60)
ATGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACG > SRR4302533.1446178/1‑94 (MQ=60)
TGCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGT < SRR4302533.1659359/94‑1 (MQ=60)
GCAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTT < SRR4302533.2684204/94‑1 (MQ=60)
CAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATACACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTC < SRR4302533.6273917/94‑1 (MQ=60)
CAACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTC > SRR4302533.4175186/1‑94 (MQ=60)
AACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCA > SRR4302533.2590772/1‑94 (MQ=60)
AACTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCA > SRR4302533.3116255/1‑94 (MQ=60)
CTCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATG > SRR4302533.1446446/1‑94 (MQ=60)
TCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGT < SRR4302533.2173887/94‑1 (MQ=60)
TCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGT > SRR4302533.4116170/1‑94 (MQ=60)
TCATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGT < SRR4302533.3617830/94‑1 (MQ=60)
CATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTC > SRR4302533.4128028/1‑94 (MQ=60)
ATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCG < SRR4302533.6075066/94‑1 (MQ=60)
ATCATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCG > SRR4302533.1320487/1‑94 (MQ=60)
CATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTC > SRR4302533.1760809/1‑94 (MQ=60)
ATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCG > SRR4302533.3579983/1‑94 (MQ=60)
ATCGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCG < SRR4302533.3900112/94‑1 (MQ=60)
CGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGC > SRR4302533.4767801/1‑94 (MQ=60)
CGCGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGC < SRR4302533.3368476/94‑1 (MQ=60)
CGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCT < SRR4302533.580253/94‑1 (MQ=60)
CGGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCT < SRR4302533.5755631/94‑1 (MQ=60)
GGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACagcagatcggaagagcggttcagca > SRR4302533.285496/1‑69 (MQ=60)
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GCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTG > NC_000913/979754‑979940
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
