Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,053,401 |
T→C |
A657A (GCA→GCG) |
torS ← |
TorS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,053,401 | 0 | T | C | 100.0%
| 679.1
/ NA
| 215 | A657A (GCA→GCG) | torS | TorS |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/90); total (125/90) |
Only 100 of 224 total aligned reads displayed.
GGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG > NC_000913/1053311‑1053490
|
ggTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTCTTGGCACGGgcgc > 1:3602142/1‑93 (MQ=255)
aaTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGt > 2:2791578/1‑93 (MQ=255)
aaTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGt < 1:4128215/93‑1 (MQ=255)
aTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTg > 1:521519/1‑93 (MQ=255)
ttCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTgg > 2:5204290/1‑93 (MQ=255)
ttCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTgg < 1:1894065/93‑1 (MQ=255)
ttCGCTGGGTTAGCGGGTTATCTTCAATTAACAGAAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTCTTTGGCACGTGCGCCGTgg > 2:5690500/1‑93 (MQ=255)
cTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAac > 2:2074974/1‑93 (MQ=255)
tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca > 1:1467025/1‑93 (MQ=255)
tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca < 2:2190588/93‑1 (MQ=255)
tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca < 2:1540629/93‑1 (MQ=255)
tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca < 2:4390357/93‑1 (MQ=255)
gggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAacac > 2:3394480/1‑93 (MQ=255)
ggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACg > 1:68251/1‑93 (MQ=255)
gTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGt > 1:4069520/1‑93 (MQ=255)
ttAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTa > 2:3463317/1‑93 (MQ=255)
tAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTaa < 1:5782132/93‑1 (MQ=255)
aGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAc > 2:4859092/1‑93 (MQ=255)
aGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAc < 1:4494577/93‑1 (MQ=255)
gCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACg > 2:2579025/1‑93 (MQ=255)
cGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACgg > 2:3031880/1‑93 (MQ=255)
gggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGc < 2:4626824/93‑1 (MQ=255)
gggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGc > 2:1436705/1‑93 (MQ=255)
ggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCa > 2:2236058/1‑93 (MQ=255)
tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc > 1:6128178/1‑93 (MQ=255)
tATCTTAAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAgg > 2:1607179/1‑92 (MQ=255)
aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg > 1:166152/1‑93 (MQ=255)
aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg > 1:6040391/1‑93 (MQ=255)
aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg > 1:3201020/1‑93 (MQ=255)
aTCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCg > 2:1979650/1‑93 (MQ=255)
tCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGt > 1:5054821/1‑93 (MQ=255)
ttCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTaa > 2:2868027/1‑93 (MQ=255)
cAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAAc > 2:1239080/1‑93 (MQ=255)
aaTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACa > 2:645367/1‑93 (MQ=255)
ttAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaa > 2:2952079/1‑93 (MQ=255)
tAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaa > 2:2840354/1‑93 (MQ=255)
aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACAGGTAACGGCAAGCGTAAACaaaaa < 1:2157582/93‑1 (MQ=255)
aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa < 2:5768557/93‑1 (MQ=255)
aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa < 1:2984244/93‑1 (MQ=255)
aCAGCAACCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc < 1:5876902/93‑1 (MQ=255)
aCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc > 1:46698/1‑93 (MQ=255)
aCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc < 2:1909029/93‑1 (MQ=255)
aGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAg > 1:160055/1‑93 (MQ=255)
gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGGAAGCGCAAACAAAAACAGc > 1:2395804/1‑93 (MQ=255)
cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt < 1:1668540/93‑1 (MQ=255)
cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt > 2:2643197/1‑93 (MQ=255)
cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt < 1:3314817/93‑1 (MQ=255)
cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGCTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt > 1:3218982/1‑93 (MQ=255)
aaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTc < 1:5490559/93‑1 (MQ=255)
aaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTc < 2:323906/93‑1 (MQ=255)
aaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTc > 1:1295168/1‑93 (MQ=255)
cGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCa < 2:811688/93‑1 (MQ=255)
cGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCa < 1:1365977/93‑1 (MQ=255)
gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa < 2:4456984/93‑1 (MQ=255)
gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa > 1:2434512/1‑93 (MQ=255)
gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa < 2:3358221/93‑1 (MQ=255)
gTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCaa < 1:4982555/93‑1 (MQ=255)
tAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAc < 1:2024815/93‑1 (MQ=255)
tAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAc > 2:1996180/1‑93 (MQ=255)
aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt > 2:3792135/1‑93 (MQ=255)
aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt > 1:5264893/1‑93 (MQ=255)
aCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTc < 1:2883369/93‑1 (MQ=255)
aCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTc > 1:3339162/1‑93 (MQ=255)
aCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTc > 1:4722405/1‑93 (MQ=255)
ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc < 2:1016292/93‑1 (MQ=255)
ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc < 1:5753067/93‑1 (MQ=255)
ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc < 1:5486181/93‑1 (MQ=255)
cGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCg < 1:3423371/93‑1 (MQ=255)
cAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCg > 2:5523515/1‑93 (MQ=255)
gACGCACCGCCTGATTGACTGTTTGTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGc < 2:4976515/93‑1 (MQ=255)
aCGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCt > 2:2155452/1‑93 (MQ=255)
aCGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCt < 1:2643329/93‑1 (MQ=255)
cGCACCCCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtg < 2:628591/93‑1 (MQ=255)
gCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg < 1:2294090/93‑1 (MQ=255)
cGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgc > 1:5111237/1‑93 (MQ=255)
cGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgc < 1:4865891/93‑1 (MQ=255)
cGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgc < 2:4909233/93‑1 (MQ=255)
cGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgc > 1:1857868/1‑93 (MQ=255)
tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc > 1:5039494/1‑93 (MQ=255)
gATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa > 2:1754583/1‑93 (MQ=255)
gATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa > 2:4051666/1‑93 (MQ=255)
aTTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAg > 2:2455439/1‑93 (MQ=255)
aTTGACTGTTTTTGGCACGGGCGACGTGGCAACACGTAACGGCACGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTCGTGGCGCTCAg > 2:4800889/1‑93 (MQ=255)
tGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGtt > 1:1066449/1‑93 (MQ=255)
gACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTc > 1:3082826/1‑93 (MQ=255)
aCTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcg > 1:5962745/1‑93 (MQ=255)
cTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgc < 2:4614298/93‑1 (MQ=255)
tGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc > 1:2495042/1‑93 (MQ=255)
tttttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgccgc < 2:5892360/93‑1 (MQ=255)
ttttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCgccgcc > 1:724992/1‑93 (MQ=255)
ttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCa < 2:5110227/93‑1 (MQ=255)
ttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCa < 1:5309013/93‑1 (MQ=255)
tGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCAt < 2:6120623/93‑1 (MQ=255)
ggCGCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATc < 1:1091678/93‑1 (MQ=255)
aggggCGCCCTGTCAACACGTAACGGCAAGCGTAAACAATAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGcc < 1:3974274/91‑1 (MQ=255)
aCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGcc < 2:3608215/93‑1 (MQ=255)
aCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGcc > 2:2633611/1‑93 (MQ=255)
cGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCt > 1:530466/1‑93 (MQ=255)
cGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCt > 1:17918/1‑93 (MQ=255)
gggCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTg < 2:1086999/93‑1 (MQ=255)
|
GGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG > NC_000913/1053311‑1053490
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGG > NC_000913/1053308‑1053491
|
AATGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGC < SRR4302533.2004620/94‑1 (MQ=60)
TGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGC < SRR4302533.4067461/94‑1 (MQ=60)
TGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGC > SRR4302533.4988546/1‑94 (MQ=60)
TGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTCTTGGCACGGGCGC > SRR4302533.3624309/1‑94 (MQ=60)
GGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCC < SRR4302533.1857276/94‑1 (MQ=60)
GTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCG > SRR4302533.4034275/1‑94 (MQ=60)
AATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTG > SRR4302533.524612/1‑94 (MQ=60)
AATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTG > SRR4302533.1621120/1‑94 (MQ=60)
AATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTG < SRR4302533.4153272/94‑1 (MQ=60)
ATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGG < SRR4302533.4917186/94‑1 (MQ=60)
TTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGC < SRR4302533.1905628/94‑1 (MQ=60)
CGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAA > SRR4302533.6028908/1‑94 (MQ=60)
CTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACA > SRR4302533.1475872/1‑94 (MQ=60)
TGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACAC < SRR4302533.6313184/94‑1 (MQ=60)
TGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACAC > SRR4302533.712481/1‑94 (MQ=60)
GGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACG > SRR4302533.68697/1‑94 (MQ=60)
GGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGT < SRR4302533.5027037/94‑1 (MQ=60)
GGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGT > SRR4302533.4094293/1‑94 (MQ=60)
GGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGT > SRR4302533.2507670/1‑94 (MQ=60)
GTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTA > SRR4302533.314734/1‑94 (MQ=60)
GTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTA > SRR4302533.1502438/1‑94 (MQ=60)
TTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAA > SRR4302533.4721328/1‑94 (MQ=60)
TAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAC < SRR4302533.5817053/94‑1 (MQ=60)
TAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAC < SRR4302533.3349232/94‑1 (MQ=60)
TAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAC < SRR4302533.6218626/94‑1 (MQ=60)
AGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACG < SRR4302533.4521795/94‑1 (MQ=60)
AGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACG < SRR4302533.2322955/94‑1 (MQ=60)
AGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACG < SRR4302533.3838169/94‑1 (MQ=60)
GCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGG > SRR4302533.3188485/1‑94 (MQ=60)
GGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCA > SRR4302533.1415173/1‑94 (MQ=60)
TTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGC > SRR4302533.6165111/1‑94 (MQ=60)
TATCTTCACTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAATGGCAAGCG > SRR4302533.908355/1‑94 (MQ=60)
TATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCG > SRR4302533.6076993/1‑94 (MQ=60)
TATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCG > SRR4302533.167205/1‑94 (MQ=60)
TATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCG > SRR4302533.3227189/1‑94 (MQ=60)
TATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCG > SRR4302533.3220717/1‑94 (MQ=60)
ATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGT > SRR4302533.1094802/1‑94 (MQ=60)
ATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGT > SRR4302533.5085379/1‑94 (MQ=60)
ATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGT > SRR4302533.5519964/1‑94 (MQ=60)
CTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAA > SRR4302533.608465/1‑94 (MQ=60)
TTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAA > SRR4302533.4116735/1‑94 (MQ=60)
TCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAAC > SRR4302533.1860319/1‑94 (MQ=60)
ATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAA > SRR4302533.5814306/1‑94 (MQ=60)
ATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAA > SRR4302533.5492018/1‑94 (MQ=60)
TTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAA > SRR4302533.3303434/1‑94 (MQ=60)
AACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACAGGTAACGGCAAGCGTAAACAAAAAC < SRR4302533.2170864/94‑1 (MQ=60)
AACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAC < SRR4302533.3002500/94‑1 (MQ=60)
AACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAC < SRR4302533.507651/94‑1 (MQ=60)
AACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAC > SRR4302533.47021/1‑94 (MQ=60)
AACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAC > SRR4302533.1677453/1‑94 (MQ=60)
ACAGCAACCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACA < SRR4302533.5912428/94‑1 (MQ=60)
CAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGTCAACACGTAACGGCAAGCGTAAACAAAAACAG < SRR4302533.4190271/94‑1 (MQ=60)
CAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAG < SRR4302533.2941514/94‑1 (MQ=60)
CAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAG > SRR4302533.5259437/1‑94 (MQ=60)
CAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAG > SRR4302533.161080/1‑94 (MQ=60)
AGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGGAAGCGCAAACAAAAACAGC > SRR4302533.2410591/1‑94 (MQ=60)
AGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGC > SRR4302533.5624997/1‑94 (MQ=60)
GCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGCTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCT > SRR4302533.3238831/1‑94 (MQ=60)
CAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTT > SRR4302533.2023862/1‑94 (MQ=60)
CAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTT < SRR4302533.1678620/94‑1 (MQ=60)
CAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTT < SRR4302533.3335282/94‑1 (MQ=60)
CAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTT > SRR4302533.5336538/1‑94 (MQ=60)
AAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTC > SRR4302533.1302965/1‑94 (MQ=60)
AAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTC > SRR4302533.5152635/1‑94 (MQ=60)
AACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCC < SRR4302533.5193461/94‑1 (MQ=60)
AACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCC < SRR4302533.5523656/94‑1 (MQ=60)
ACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCA > SRR4302533.1730153/1‑94 (MQ=60)
CGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAA > SRR4302533.4508805/1‑94 (MQ=60)
CGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAA > SRR4302533.2449550/1‑94 (MQ=60)
CGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAA < SRR4302533.1374189/94‑1 (MQ=60)
GTAAGCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAC < SRR4302533.1360708/94‑1 (MQ=60)
GTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAC > SRR4302533.1872096/1‑94 (MQ=60)
GTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAC < SRR4302533.5012766/94‑1 (MQ=60)
TAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACC < SRR4302533.2037315/94‑1 (MQ=60)
TAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACC < SRR4302533.1152189/94‑1 (MQ=60)
AAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCT > SRR4302533.5296490/1‑94 (MQ=60)
AACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTC > SRR4302533.3359800/1‑94 (MQ=60)
AACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTC > SRR4302533.4751036/1‑94 (MQ=60)
ACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCC < SRR4302533.2901104/94‑1 (MQ=60)
CCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCG < SRR4302533.5787777/94‑1 (MQ=60)
CCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCG < SRR4302533.5519249/94‑1 (MQ=60)
CGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGG < SRR4302533.3444520/94‑1 (MQ=60)
CGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGG > SRR4302533.5885581/1‑94 (MQ=60)
GTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGC > SRR4302533.4635220/1‑94 (MQ=60)
TCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCG > SRR4302533.3040365/1‑94 (MQ=60)
AATACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTG < SRR4302533.2041220/94‑1 (MQ=60)
ACGCGCCTCCTGATTGACTGTTTGTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTG < SRR4302533.5103899/94‑1 (MQ=60)
ACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTG < SRR4302533.2659572/94‑1 (MQ=60)
GCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGT < SRR4302533.2308292/94‑1 (MQ=60)
CACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTG < SRR4302533.530339/94‑1 (MQ=60)
CACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTG > SRR4302533.1583446/1‑94 (MQ=60)
CCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGC > SRR4302533.5142129/1‑94 (MQ=60)
CCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGC > SRR4302533.1869198/1‑94 (MQ=60)
CCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGC < SRR4302533.481324/94‑1 (MQ=60)
CCGCCTGATTCACTGTTTTTGGCACGTGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGC < SRR4302533.351772/94‑1 (MQ=60)
CGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCG > SRR4302533.2444736/1‑94 (MQ=60)
CGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCG < SRR4302533.4895378/94‑1 (MQ=60)
CTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTC > SRR4302533.5070004/1‑94 (MQ=60)
TGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCA > SRR4302533.2210023/1‑94 (MQ=60)
GATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAG < SRR4302533.2653791/94‑1 (MQ=60)
GATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAG < SRR4302533.3437339/94‑1 (MQ=60)
TTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTT > SRR4302533.1072715/1‑94 (MQ=60)
TGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTC > SRR4302533.5352539/1‑94 (MQ=60)
TGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTC > SRR4302533.3101778/1‑94 (MQ=60)
GACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCG < SRR4302533.5943333/94‑1 (MQ=60)
GACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCG > SRR4302533.5998817/1‑94 (MQ=60)
ACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGC > SRR4302533.2624567/1‑94 (MQ=60)
CTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCC > SRR4302533.2510434/1‑94 (MQ=60)
TTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCC > SRR4302533.729280/1‑94 (MQ=60)
TTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCC > SRR4302533.5823678/1‑94 (MQ=60)
TTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCAT < SRR4302533.5340829/94‑1 (MQ=60)
TGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCCTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATC < SRR4302533.3396507/94‑1 (MQ=60)
GGCGCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCG < SRR4302533.1098130/94‑1 (MQ=60)
CACGGGCGCCGTGGCAACACGTAGCGGCAAGCGTAAACAAAAACAGCTTCCATCCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCC < SRR4302533.275669/94‑1 (MQ=60)
ACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCT > SRR4302533.18040/1‑94 (MQ=60)
ACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCT > SRR4302533.533622/1‑94 (MQ=60)
CGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG < SRR4302533.2209825/94‑1 (MQ=60)
GGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGG > SRR4302533.4356621/1‑94 (MQ=60)
GGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGG > SRR4302533.2160308/1‑94 (MQ=60)
|
AATGGTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGG > NC_000913/1053308‑1053491
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
