Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,413,507 |
(G)5→4 |
coding (1904/2601 nt) |
recE ← |
exonuclease VIII |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,413,503 | 0 | G | . | 99.4%
| 715.8
/ ‑3.2
| 158 | coding (1908/2601 nt) | recE | exonuclease VIII |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base . (70/86); total (71/87) |
| Fisher's exact test for biased strand distribution p-value = 4.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 178 total aligned reads displayed.
ACGATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAT > NC_000913/1413411‑1413591
|
cGATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACgg < 2:2784390/93‑1 (MQ=255)
gATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACggg < 2:3527263/93‑1 (MQ=255)
gATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACggg > 1:2005822/1‑93 (MQ=255)
aTAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACgggg < 1:1977298/93‑1 (MQ=255)
aTAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACgggg < 2:1688105/93‑1 (MQ=255)
aTAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACgggg > 1:4130615/1‑93 (MQ=255)
tAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACggggc > 2:3437371/1‑92 (MQ=255)
aaaGCGGTTACTGAATTCTTCCGGTTCAAGTACCCCGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACggggca > 2:4542250/1‑91 (MQ=255)
aGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACggggcatt > 1:4347428/1‑89 (MQ=255)
gCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCAttt > 2:89724/1‑93 (MQ=255)
cGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCAtttt < 2:1307697/93‑1 (MQ=255)
gTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTa < 1:5642270/93‑1 (MQ=255)
ttACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTAc < 1:1079138/93‑1 (MQ=255)
ttACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTAc < 2:1366869/93‑1 (MQ=255)
tACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTTCTAAATCGAGCGTTTTTGTCGTGGTGGTGTCCAC‑GGGGCATTTTTACg > 1:293616/1‑93 (MQ=255)
aCTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGCGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGc > 2:6188259/1‑93 (MQ=255)
aCTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGc > 2:1146884/1‑93 (MQ=255)
aCTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCAGTTTTACGc < 2:6122998/93‑1 (MQ=255)
cTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGcc > 1:5809338/1‑93 (MQ=255)
aTTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACaa < 2:5525909/93‑1 (MQ=255)
ttcttcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACaaa < 2:2402220/93‑1 (MQ=255)
ttcttcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACaaa < 1:1204960/93‑1 (MQ=255)
tcttcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAat < 1:5004098/93‑1 (MQ=255)
cttcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTACATCGAGCGTTTTTGTCTTTGTGGGGTCCAC‑GGGGCAGTTCTAGGCCACAAata > 2:2999398/1‑93 (MQ=255)
cttcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAata < 1:840737/93‑1 (MQ=255)
tcCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAAtata < 1:761500/93‑1 (MQ=255)
ccGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAg < 2:255002/93‑1 (MQ=255)
cGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGt < 1:1765624/93‑1 (MQ=255)
cGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGt < 2:536214/93‑1 (MQ=255)
gTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGc > 1:4227539/1‑93 (MQ=255)
ttCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGcc > 2:2683334/1‑93 (MQ=255)
tCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCg > 1:4367843/1‑93 (MQ=255)
tCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCg < 1:3097607/93‑1 (MQ=255)
cAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCgg < 1:105355/93‑1 (MQ=255)
cAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCgg < 1:2253629/93‑1 (MQ=255)
aaGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGa > 1:4943844/1‑93 (MQ=255)
tACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTa < 2:5232755/93‑1 (MQ=255)
cccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATc < 1:5274141/93‑1 (MQ=255)
cccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATc < 2:2902371/93‑1 (MQ=255)
ccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCa > 1:4601043/1‑93 (MQ=255)
ccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCa < 2:4501474/93‑1 (MQ=255)
ccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCa > 1:3917732/1‑93 (MQ=255)
ccGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCa < 2:6278538/93‑1 (MQ=255)
cGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAg < 1:5695491/93‑1 (MQ=255)
cAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCaa < 2:1787554/93‑1 (MQ=255)
aGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAAt < 1:4240926/93‑1 (MQ=255)
gTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATg > 2:3923388/1‑93 (MQ=255)
gTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATg < 1:3049418/93‑1 (MQ=255)
tGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGt < 1:765067/93‑1 (MQ=255)
ggAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTc > 1:223049/1‑93 (MQ=255)
ggAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTc > 1:6200320/1‑93 (MQ=255)
gAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCa < 2:3110936/93‑1 (MQ=255)
gAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCa > 2:4491821/1‑93 (MQ=255)
gAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCa > 2:5982167/1‑93 (MQ=255)
gAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCa < 2:6144932/93‑1 (MQ=255)
aaGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATc < 1:5412370/93‑1 (MQ=255)
aaGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATc < 1:2107705/93‑1 (MQ=255)
aGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCg > 2:488245/1‑93 (MQ=255)
aGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCg > 1:3229785/1‑93 (MQ=255)
gCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGa > 2:1225844/1‑93 (MQ=255)
gCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGa < 2:5493956/93‑1 (MQ=255)
gCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCAAAAATATAGTGCCGGAGTATCAGCAATGTCATCGa < 2:1549763/93‑1 (MQ=255)
aGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGc > 2:3059375/1‑93 (MQ=255)
gTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCt > 2:1457666/1‑93 (MQ=255)
gTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCt > 2:526636/1‑93 (MQ=255)
gTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGGCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCt > 1:3067593/1‑93 (MQ=255)
cTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTgaga < 1:5369181/93‑1 (MQ=255)
tAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGTGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAc < 1:3742903/93‑1 (MQ=255)
tAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAc > 2:4022147/1‑93 (MQ=255)
tAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAc > 2:2122943/1‑93 (MQ=255)
tAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAc < 2:1067917/93‑1 (MQ=255)
tAAATCGAGCGTTTTTGTCTTTGTGGTGTCCA‑TGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAc < 1:731416/93‑1 (MQ=255)
aTCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTa < 2:4153028/93‑1 (MQ=255)
cGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACt < 2:4710202/93‑1 (MQ=255)
aGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGa < 1:2937397/93‑1 (MQ=255)
aGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGa > 2:2507793/1‑93 (MQ=255)
cGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATa > 2:1462705/1‑93 (MQ=255)
cGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATa < 2:5604653/93‑1 (MQ=255)
gTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAc < 1:3979295/93‑1 (MQ=255)
gTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAc > 1:981095/1‑93 (MQ=255)
gTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAc < 2:4286076/93‑1 (MQ=255)
tttttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAcc < 2:5111442/93‑1 (MQ=255)
tttttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAcc > 2:1645429/1‑93 (MQ=255)
tttttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAcc > 2:1817188/1‑93 (MQ=255)
tttttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAcc > 2:2327979/1‑93 (MQ=255)
ttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCggg > 1:1281594/1‑93 (MQ=255)
ttGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCggg < 1:5078799/93‑1 (MQ=255)
gTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAc < 1:2320992/93‑1 (MQ=255)
gTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAc > 1:593696/1‑93 (MQ=255)
tCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAcc > 2:5709935/1‑93 (MQ=255)
tttGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAcccc > 1:2424638/1‑92 (MQ=255)
tttGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCcg > 1:6074271/1‑93 (MQ=255)
tttGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCcg < 1:327226/93‑1 (MQ=255)
gtggtgTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGt < 2:2829828/93‑1 (MQ=255)
gtggtgTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGt < 2:1510858/93‑1 (MQ=255)
tggtgTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTg > 1:5542889/1‑93 (MQ=255)
gtgtCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGt < 1:5555158/93‑1 (MQ=255)
gtCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTaa < 1:1406934/93‑1 (MQ=255)
tCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAt > 1:393150/1‑93 (MQ=255)
tCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAt > 2:3382076/1‑93 (MQ=255)
|
ACGATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAT > NC_000913/1413411‑1413591
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCATTCG > NC_000913/1413414‑1413600
|
ATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGC < SRR4302533.1989407/94‑1 (MQ=60)
AAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATT > SRR4302533.4373635/1‑94 (MQ=60)
GCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTT < SRR4302533.6033137/94‑1 (MQ=60)
CGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTT < SRR4302533.541739/94‑1 (MQ=60)
GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTA < SRR4302533.1216012/94‑1 (MQ=60)
GTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTAC > SRR4302533.2238947/1‑94 (MQ=60)
GTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTAC < SRR4302533.5676372/94‑1 (MQ=60)
TTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTTCTAAATCGAGCGTTTTTGTCGTGGTGGTGTCCAC‑GGGGCATTTTTACG > SRR4302533.295409/1‑94 (MQ=60)
TTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACG < SRR4302533.1085497/94‑1 (MQ=60)
ACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCC > SRR4302533.5844420/1‑94 (MQ=60)
AATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAA > SRR4302533.3072873/1‑94 (MQ=60)
ATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTACAC‑GGGGCATTTTTACGCCACAAA < SRR4302533.4260901/94‑1 (MQ=60)
TTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAAT < SRR4302533.1212203/94‑1 (MQ=60)
TCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATA < SRR4302533.5034425/94‑1 (MQ=60)
CTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATAT < SRR4302533.845655/94‑1 (MQ=60)
TCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAG < SRR4302533.5496062/94‑1 (MQ=60)
TCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAG < SRR4302533.765982/94‑1 (MQ=60)
CGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTG < SRR4302533.1776376/94‑1 (MQ=60)
GGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGC > SRR4302533.4168542/1‑94 (MQ=60)
GGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGC > SRR4302533.4253099/1‑94 (MQ=60)
GTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCC > SRR4302533.2295863/1‑94 (MQ=60)
TTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCG < SRR4302533.1989865/94‑1 (MQ=60)
TTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCG > SRR4302533.4394210/1‑94 (MQ=60)
TCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGG < SRR4302533.3116652/94‑1 (MQ=60)
CAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGA > SRR4302533.4973770/1‑94 (MQ=60)
CAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGA < SRR4302533.106011/94‑1 (MQ=60)
CAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGA < SRR4302533.2267566/94‑1 (MQ=60)
TACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTAT < SRR4302533.4426770/94‑1 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGG‑ATTTTTACGCCACAAATATGGTGGCAGAGTATCA > SRR4302533.3941659/1‑94 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCA < SRR4302533.1317927/94‑1 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCA < SRR4302533.5305762/94‑1 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCA > SRR4302533.4628919/1‑94 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCA > SRR4302533.3941657/1‑94 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCA > SRR4302533.939623/1‑94 (MQ=60)
CCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGACATTTTTACGCCACAAATATAGTGCCGGAGTATCA < SRR4302533.2066847/94‑1 (MQ=60)
CCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAG < SRR4302533.5316215/94‑1 (MQ=60)
CCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAG > SRR4302533.6212708/1‑94 (MQ=60)
CGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGC < SRR4302533.5729900/94‑1 (MQ=60)
AGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATG < SRR4302533.4266535/94‑1 (MQ=60)
AGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATG < SRR4302533.5832030/94‑1 (MQ=60)
GTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGT > SRR4302533.5020871/1‑94 (MQ=60)
GTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGT < SRR4302533.3068082/94‑1 (MQ=60)
GTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGT < SRR4302533.520659/94‑1 (MQ=60)
TGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTC > SRR4302533.224441/1‑94 (MQ=60)
TGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTC > SRR4302533.6237511/1‑94 (MQ=60)
TGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTC < SRR4302533.769575/94‑1 (MQ=60)
AAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCG < SRR4302533.5444915/94‑1 (MQ=60)
AAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCG > SRR4302533.3249696/1‑94 (MQ=60)
AAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCG < SRR4302533.2120708/94‑1 (MQ=60)
AGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGA > SRR4302533.3183727/1‑94 (MQ=60)
GCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAG < SRR4302533.2350482/94‑1 (MQ=60)
CAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGC > SRR4302533.431060/1‑94 (MQ=60)
AGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGGCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCT > SRR4302533.3086433/1‑94 (MQ=60)
TTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGA > SRR4302533.3578818/1‑94 (MQ=60)
CCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGA > SRR4302533.786747/1‑94 (MQ=60)
CTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAC < SRR4302533.1088801/94‑1 (MQ=60)
CTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGAC < SRR4302533.5401433/94‑1 (MQ=60)
TAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGTGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACT < SRR4302533.3765860/94‑1 (MQ=60)
TAAATCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACT > SRR4302533.752787/1‑94 (MQ=60)
TAAATCGAGCGTTTTTGTCTTTGTGGTGTCCA‑TGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACT < SRR4302533.735723/94‑1 (MQ=60)
TCGAGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACT < SRR4302533.4955407/94‑1 (MQ=60)
AGCGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGAT < SRR4302533.2955350/94‑1 (MQ=60)
CGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAC > SRR4302533.986847/1‑94 (MQ=60)
CGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAC > SRR4302533.2623305/1‑94 (MQ=60)
CGTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATAC > SRR4302533.3918217/1‑94 (MQ=60)
GTTTTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACC < SRR4302533.4003520/94‑1 (MQ=60)
TTTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGG > SRR4302533.1289307/1‑94 (MQ=60)
TTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGA < SRR4302533.5109494/94‑1 (MQ=60)
TTGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGA < SRR4302533.3096278/94‑1 (MQ=60)
TGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAC < SRR4302533.5721483/94‑1 (MQ=60)
TGTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGAC > SRR4302533.597197/1‑94 (MQ=60)
GTCTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACC < SRR4302533.2335358/94‑1 (MQ=60)
CTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCG > SRR4302533.6111015/1‑94 (MQ=60)
CTTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCC > SRR4302533.2439607/1‑94 (MQ=60)
TTTGTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGC < SRR4302533.329216/94‑1 (MQ=60)
GTGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTG > SRR4302533.5576364/1‑94 (MQ=60)
TGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGG < SRR4302533.412579/94‑1 (MQ=60)
TGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGG < SRR4302533.5611787/94‑1 (MQ=60)
TGGTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGG > SRR4302533.1902918/1‑94 (MQ=60)
GTGTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTA < SRR4302533.5588706/94‑1 (MQ=60)
GTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAT > SRR4302533.395534/1‑94 (MQ=60)
GTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAT < SRR4302533.1415443/94‑1 (MQ=60)
GTCCAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAAT < SRR4302533.3002188/94‑1 (MQ=60)
CAC‑GGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCT < SRR4302533.1245500/94‑1 (MQ=60)
CGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCA > SRR4302533.5867159/1‑94 (MQ=60)
CGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCA > SRR4302533.6315448/1‑94 (MQ=60)
GGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCATTC < SRR4302533.737935/94‑1 (MQ=60)
GCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCATTCG < SRR4302533.5090679/94‑1 (MQ=60)
GCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCATTCG < SRR4302533.2865804/94‑1 (MQ=60)
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ATAAAGCGGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTGATACCGGGACCCGCGTGGTAATTCTCATTCG > NC_000913/1413414‑1413600
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
